No.
Definition
Score (bits)
E Value
1 ref|NM_001067834.1| Oryza sativa (japonica cultivar-group) Os08g...
553
e-154
2 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
553
e-154
3 dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic D...
553
e-154
4 dbj|AK107589.1| Oryza sativa (japonica cultivar-group) cDNA clon...
537
e-149
5 dbj|AP006380.1| Lotus japonicus genomic DNA, chromosome 4, clone...
129
4e-26
6 dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic D...
119
4e-23
7 gb|DQ333047.1| Synthetic construct Saccharomyces cerevisiae clon...
50
0.032
8 emb|Z73252.1|SCYLR080W S.cerevisiae chromosome XII reading frame...
50
0.032
9 gb|U53880.1|YSCL9449 Saccharomyces cerevisiae chromosome XII cos...
50
0.032
10 gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete se...
46
0.50
11 emb|AL162425.15| Human DNA sequence from clone RP11-523L1 on chr...
46
0.50
12 gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-6...
46
0.50
13 gb|AC093292.2| Homo sapiens chromosome 5 clone RP11-503D12, comp...
44
2.0
14 gb|AC110790.3| Homo sapiens BAC clone RP11-548L20 from 4, comple...
44
2.0
15 gb|AC093297.3| Homo sapiens chromosome 5 clone RP11-53O19, compl...
44
2.0
16 emb|AL358943.13| Human DNA sequence from clone RP3-353O9 on chro...
44
2.0
17 emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, c...
44
2.0
18 emb|BX323844.7| Zebrafish DNA sequence from clone DKEY-29H18 in ...
44
2.0
19 emb|CR761654.2| Xenopus tropicalis finished cDNA, clone TGas088l22
44
2.0
20 gb|AC189730.3| Canis Familiaris, clone XX-494D7, complete sequence
42
7.8
21 gb|AC189722.4| Canis Familiaris, clone XX-306G8, complete sequence
42
7.8
22 gb|DQ898282.1| Sus scrofa glutathione peroxidase 2 (GPX2) mRNA, ...
42
7.8
23 gb|AC188926.6| Canis Familiaris chromosome 13, clone XX-408G5, c...
42
7.8
24 emb|CT030725.15| Mouse DNA sequence from clone RP24-281O2 on chr...
42
7.8
25 gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-1...
42
7.8
26 gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp...
42
7.8
27 ref|NM_153404.1| Mus musculus lipase, member H (Liph), mRNA >gi|...
42
7.8
28 gb|AC121904.2| Mus musculus BAC clone RP24-175O7 from 7, complet...
42
7.8
29 dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co...
42
7.8
30 dbj|AK137278.1| Mus musculus adult male urinary bladder cDNA, RI...
42
7.8
31 dbj|AK134352.1| Mus musculus 13 days embryo male testis cDNA, RI...
42
7.8
32 gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete...
42
7.8
33 dbj|AK136503.1| Mus musculus adult male cecum cDNA, RIKEN full-l...
42
7.8
34 gb|AY093499.1| Mus musculus lipase H (Liph) mRNA, complete cds
42
7.8
35 gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co...
42
7.8
36 dbj|AK162492.1| Mus musculus adult male urinary bladder cDNA, RI...
42
7.8
37 gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl...
42
7.8
38 dbj|AK161067.1| Mus musculus 0 day neonate skin cDNA, RIKEN full...
42
7.8
39 dbj|AK035498.1| Mus musculus adult male urinary bladder cDNA, RI...
42
7.8
40 emb|X57987.1|GDCOL6A1 G.domesticus Col6A1 gene for collagen type...
42
7.8
41 dbj|AK048150.1| Mus musculus 16 days embryo head cDNA, RIKEN ful...
42
7.8
42 emb|Z84487.2|HS346O6 Human DNA sequence from clone RP3-346O6 on ...
42
7.8
43 gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, comp...
42
7.8
44 gb|AC090984.5| Homo sapiens chromosome 15, clone RP11-500C12, co...
42
7.8
45 gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, compl...
42
7.8
46 emb|AL162591.16| Human DNA sequence from clone RP11-350G8 on chr...
42
7.8
47 emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 i...
42
7.8
48 emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g...
42
7.8
49 emb|AJ630363.1| Canis familiaris MHC class II region on chromoso...
42
7.8
50 dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com...
42
7.8
51 emb|BX663533.7| Zebrafish DNA sequence from clone DKEY-85A11 in ...
42
7.8
52 dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic...
42
7.8
53 emb|CR376760.1| Pan troglodytes chromosome X BAC PTB-056G20, com...
42
7.8
54 emb|BX004769.9| Zebrafish DNA sequence from clone DKEY-15I8 in l...
42
7.8
55 emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2...
42
7.8
56 gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Canc...
42
7.8
57 emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
42
7.8
58 emb|AL844205.6| Mouse DNA sequence from clone RP23-432I17 on chr...
42
7.8
59 emb|AL355837.6|CNS05TCR Human chromosome 14 DNA sequence BAC C-2...
42
7.8
60 gb|AF015889.1| Synechococcus PCC7002 carbon dioxide concentratin...
42
7.8
>ref|NM_001067834.1 | Oryza sativa (japonica cultivar-group) Os08g0230500 (Os08g0230500)
mRNA, complete cds
Length = 2286
Score = 553 bits (279), Expect = e-154
Identities = 468/531 (88%)
Strand = Plus / Plus
Query: 285 tggatcattctcaagcaaataaccagacaagtgtagtcctcggtccagtggctatctttt 344
|||| ||||||||||||||||||||| || | ||| || |||||||||||||||||||
Sbjct: 315 tggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatctttt 374
Query: 345 gggacattgagaattgccctgttccaagtgatgtacggccagatgatgttgcagggaata 404
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 375 gggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatg 434
Query: 405 tacggatggcattacggctgcatcctgttgttaacggtgcagttacagttctctctgctt 464
| ||||||||||||||||| |||||||||||||| ||||| || ||| | |||||||| |
Sbjct: 435 tccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcat 494
Query: 465 atggagatttcaatgcttttcctagaagactcagggagggatgtcagagaacaggagtca 524
| || ||||||||||| || || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 495 acggtgatttcaatgccttcccaagaagactcagagagggatgtcaaagaactggagtca 554
Query: 525 aacttgtcgatgttccaaatgggcggaaagatgctgctgataaggctatactggtagata 584
||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 555 aacttgttgatgttccaaatggaaggaaagatgctgctgataaggctatactggttgata 614
Query: 585 tgtttctctttgctctggacaatcatccaccgtcatccattatgcttatatctggtgatg 644
||||||| ||||| ||||||||| |||||| |||||||||||||||||||| ||||| |
Sbjct: 615 tgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacg 674
Query: 645 tggactttgctcctgctctccatatacttggtcagcgtggatacactattgcccttgcaa 704
|||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || |
Sbjct: 675 tggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggcca 734
Query: 705 ttccatcttcagttaccgtctcatcggctttgagcagtgctgggagtttcgtgtgggact 764
||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||
Sbjct: 735 ttccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggact 794
Query: 765 ggcctagtcttgcccgtggtgcaggcagtgtaccccccagatccttagggc 815
||||||||||||| ||||||| ||| | ||| |||| |||||| ||||||
Sbjct: 795 ggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggc 845
Score = 291 bits (147), Expect = 5e-75
Identities = 323/381 (84%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 1033 tggcacatcatcgagttcacatcatgtatcaggtggtttgaatgaagtcccagtgataga 1092
|||||||||||| || |||||| || || || || |||||||||||| |||| ||||
Sbjct: 1057 tggcacatcatcaaggtcacataatttagcatgtagtttgaatgaaggtccagatgtaga 1116
Query: 1093 ccaaggatttacaggcgaacaatcatggtgggttcgtcctggtgatcttcaaggcttgaa 1152
|||||| || ||| || | |||||||||||||||||||||||||||||||| |||||
Sbjct: 1117 ccaaggtttgccagatgagcggtcatggtgggttcgtcctggtgatcttcaaggtttgaa 1176
Query: 1153 aggtcaactaataaggttatttcagttatctggtggatctgttccacttgtccgtgttcc 1212
|| ||| | | |||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 1177 gggccaattgttgcggttgtttgagttatcaggtggatctgttccacttgtccgtgttcc 1236
Query: 1213 ttcagagtatttaaagctcttcggaaggcacctgtatgtagcagaatatggagctgtaaa 1272
|||||| ||| |||| ||||| ||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 1237 ttcagaatatctaaaactctttggaagacacctctatgtatcagaatatggagctgttaa 1296
Query: 1273 acttgttcatcttttcgaaaagctggctgagtcttttgtcgtcatagggaagggtcagag 1332
|||| ||||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 1297 acttattcatctctttgaaaagcttgctgactcttttgtggtcatagggaagggtcatag 1356
Query: 1333 aaagatgatttgcctccgcaattctggtgataggaac---atgaaatatccaagcacacc 1389
|||| |||||||||| || |||||||||||||| ||| | ||||||| ||| ||||||
Sbjct: 1357 aaaggtgatttgccttcgaaattctggtgatagtaacctgaagaaatattcaaccacacc 1416
Query: 1390 aataattttgaaaaatgaaaa 1410
||| ||||||||||| |||||
Sbjct: 1417 aattattttgaaaaaggaaaa 1437
Score = 119 bits (60), Expect = 4e-23
Identities = 218/270 (80%), Gaps = 3/270 (1%)
Strand = Plus / Plus
Query: 1447 aacatgtcagcagttgagcagctcatcagaagatctctcagaggatgaacagaacattaa 1506
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1474 aacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaa 1533
Query: 1507 ccctggcgtagatggaacatatgtgtttgatagccatctatacaagtgcagaacagaggt 1566
||| | ||||||||| |||||| || |||||||||||| |||| | |||| ||| |
Sbjct: 1534 cccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagat 1593
Query: 1567 cgaggctcttcttgtctgttacttgtcgtgccctcttccactctcccattttgagtccct 1626
||| ||||||||||||||| || |||||| ||||||| |||| |||| ||
Sbjct: 1594 tcaggagcttcttgtctgttac---tcttgccctgttccactgggtaatttcaagtctct 1650
Query: 1627 gtatgagcaacggtacaagaagactctcgactaccagagctgtggagttgatggtctgga 1686
||||| |||||||||||||||||||| ||| |||||| ||| || |||||||||||
Sbjct: 1651 ctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctgga 1710
Query: 1687 ggaactgcttaacaagttaaaagatgttgt 1716
||| || || | ||| |||||||||||||
Sbjct: 1711 ggagctagttgagaaggtaaaagatgttgt 1740
Score = 79.8 bits (40), Expect = 4e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 869 cctgacatacagactgaagaggaggccattgtttatatgggaactttgaggaatgaatat 928
||||||| |||| |||||||||||||||||| || |||||||||| || |||||||
Sbjct: 899 cctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgc 958
Query: 929 ggtgggagaacaaccagcaaccagattaactgctataactcttc 972
|||| ||||| |||||||||||||| | ||||||||||||||
Sbjct: 959 agtggtagaactaccagcaaccagatatattgctataactcttc 1002
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 182 atgtcttttgaagataaagcaatggctagtcgtattacctcaccctcactaaaagctaca 241
||||||||||||||||||||||||||||| ||| | | |||||||||| |||| |||
Sbjct: 209 atgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatg 268
Query: 242 gtatcagaatcaga 255
| |||||||||||
Sbjct: 269 gcttcagaatcaga 282
Score = 44.1 bits (22), Expect = 2.0
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1926 gcacagcaaatgcttgtaataatatctcgttctgctaatcta 1967
|||||| |||||||||||||||| | || || ||||||||||
Sbjct: 2131 gcacagaaaatgcttgtaataatttatcattatgctaatcta 2172
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
Length = 28434780
Score = 553 bits (279), Expect = e-154
Identities = 468/531 (88%)
Strand = Plus / Minus
Query: 285 tggatcattctcaagcaaataaccagacaagtgtagtcctcggtccagtggctatctttt 344
|||| ||||||||||||||||||||| || | ||| || |||||||||||||||||||
Sbjct: 7959644 tggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatctttt 7959585
Query: 345 gggacattgagaattgccctgttccaagtgatgtacggccagatgatgttgcagggaata 404
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 7959584 gggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatg 7959525
Query: 405 tacggatggcattacggctgcatcctgttgttaacggtgcagttacagttctctctgctt 464
| ||||||||||||||||| |||||||||||||| ||||| || ||| | |||||||| |
Sbjct: 7959524 tccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcat 7959465
Query: 465 atggagatttcaatgcttttcctagaagactcagggagggatgtcagagaacaggagtca 524
| || ||||||||||| || || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 7959464 acggtgatttcaatgccttcccaagaagactcagagagggatgtcaaagaactggagtca 7959405
Query: 525 aacttgtcgatgttccaaatgggcggaaagatgctgctgataaggctatactggtagata 584
||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 7959404 aacttgttgatgttccaaatggaaggaaagatgctgctgataaggctatactggttgata 7959345
Query: 585 tgtttctctttgctctggacaatcatccaccgtcatccattatgcttatatctggtgatg 644
||||||| ||||| ||||||||| |||||| |||||||||||||||||||| ||||| |
Sbjct: 7959344 tgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacg 7959285
Query: 645 tggactttgctcctgctctccatatacttggtcagcgtggatacactattgcccttgcaa 704
|||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || |
Sbjct: 7959284 tggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggcca 7959225
Query: 705 ttccatcttcagttaccgtctcatcggctttgagcagtgctgggagtttcgtgtgggact 764
||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||
Sbjct: 7959224 ttccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggact 7959165
Query: 765 ggcctagtcttgcccgtggtgcaggcagtgtaccccccagatccttagggc 815
||||||||||||| ||||||| ||| | ||| |||| |||||| ||||||
Sbjct: 7959164 ggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggc 7959114
Score = 291 bits (147), Expect = 5e-75
Identities = 323/381 (84%), Gaps = 3/381 (0%)
Strand = Plus / Minus
Query: 1033 tggcacatcatcgagttcacatcatgtatcaggtggtttgaatgaagtcccagtgataga 1092
|||||||||||| || |||||| || || || || |||||||||||| |||| ||||
Sbjct: 7958902 tggcacatcatcaaggtcacataatttagcatgtagtttgaatgaaggtccagatgtaga 7958843
Query: 1093 ccaaggatttacaggcgaacaatcatggtgggttcgtcctggtgatcttcaaggcttgaa 1152
|||||| || ||| || | |||||||||||||||||||||||||||||||| |||||
Sbjct: 7958842 ccaaggtttgccagatgagcggtcatggtgggttcgtcctggtgatcttcaaggtttgaa 7958783
Query: 1153 aggtcaactaataaggttatttcagttatctggtggatctgttccacttgtccgtgttcc 1212
|| ||| | | |||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 7958782 gggccaattgttgcggttgtttgagttatcaggtggatctgttccacttgtccgtgttcc 7958723
Query: 1213 ttcagagtatttaaagctcttcggaaggcacctgtatgtagcagaatatggagctgtaaa 1272
|||||| ||| |||| ||||| ||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 7958722 ttcagaatatctaaaactctttggaagacacctctatgtatcagaatatggagctgttaa 7958663
Query: 1273 acttgttcatcttttcgaaaagctggctgagtcttttgtcgtcatagggaagggtcagag 1332
|||| ||||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 7958662 acttattcatctctttgaaaagcttgctgactcttttgtggtcatagggaagggtcatag 7958603
Query: 1333 aaagatgatttgcctccgcaattctggtgataggaac---atgaaatatccaagcacacc 1389
|||| |||||||||| || |||||||||||||| ||| | ||||||| ||| ||||||
Sbjct: 7958602 aaaggtgatttgccttcgaaattctggtgatagtaacctgaagaaatattcaaccacacc 7958543
Query: 1390 aataattttgaaaaatgaaaa 1410
||| ||||||||||| |||||
Sbjct: 7958542 aattattttgaaaaaggaaaa 7958522
Score = 119 bits (60), Expect = 4e-23
Identities = 218/270 (80%), Gaps = 3/270 (1%)
Strand = Plus / Minus
Query: 1447 aacatgtcagcagttgagcagctcatcagaagatctctcagaggatgaacagaacattaa 1506
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 7958485 aacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaa 7958426
Query: 1507 ccctggcgtagatggaacatatgtgtttgatagccatctatacaagtgcagaacagaggt 1566
||| | ||||||||| |||||| || |||||||||||| |||| | |||| ||| |
Sbjct: 7958425 cccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagat 7958366
Query: 1567 cgaggctcttcttgtctgttacttgtcgtgccctcttccactctcccattttgagtccct 1626
||| ||||||||||||||| || |||||| ||||||| |||| |||| ||
Sbjct: 7958365 tcaggagcttcttgtctgttac---tcttgccctgttccactgggtaatttcaagtctct 7958309
Query: 1627 gtatgagcaacggtacaagaagactctcgactaccagagctgtggagttgatggtctgga 1686
||||| |||||||||||||||||||| ||| |||||| ||| || |||||||||||
Sbjct: 7958308 ctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctgga 7958249
Query: 1687 ggaactgcttaacaagttaaaagatgttgt 1716
||| || || | ||| |||||||||||||
Sbjct: 7958248 ggagctagttgagaaggtaaaagatgttgt 7958219
Score = 79.8 bits (40), Expect = 4e-11
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 869 cctgacatacagactgaagaggaggccattgtttatatgggaactttgaggaatgaatat 928
||||||| |||| |||||||||||||||||| || |||||||||| || |||||||
Sbjct: 7959060 cctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgc 7959001
Query: 929 ggtgggagaacaaccagcaaccagattaactgctataactcttc 972
|||| ||||| |||||||||||||| | ||||||||||||||
Sbjct: 7959000 agtggtagaactaccagcaaccagatatattgctataactcttc 7958957
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 182 atgtcttttgaagataaagcaatggctagtcgtattacctcaccctcactaaaagctaca 241
||||||||||||||||||||||||||||| ||| | | |||||||||| |||| |||
Sbjct: 7959750 atgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatg 7959691
Query: 242 gtatcagaatcaga 255
| |||||||||||
Sbjct: 7959690 gcttcagaatcaga 7959677
Score = 44.1 bits (22), Expect = 2.0
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1926 gcacagcaaatgcttgtaataatatctcgttctgctaatcta 1967
|||||| |||||||||||||||| | || || ||||||||||
Sbjct: 7957828 gcacagaaaatgcttgtaataatttatcattatgctaatcta 7957787
>dbj|AP004559.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0461A06
Length = 136384
Score = 553 bits (279), Expect = e-154
Identities = 468/531 (88%)
Strand = Plus / Minus
Query: 285 tggatcattctcaagcaaataaccagacaagtgtagtcctcggtccagtggctatctttt 344
|||| ||||||||||||||||||||| || | ||| || |||||||||||||||||||
Sbjct: 31814 tggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatctttt 31755
Query: 345 gggacattgagaattgccctgttccaagtgatgtacggccagatgatgttgcagggaata 404
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 31754 gggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatg 31695
Query: 405 tacggatggcattacggctgcatcctgttgttaacggtgcagttacagttctctctgctt 464
| ||||||||||||||||| |||||||||||||| ||||| || ||| | |||||||| |
Sbjct: 31694 tccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcat 31635
Query: 465 atggagatttcaatgcttttcctagaagactcagggagggatgtcagagaacaggagtca 524
| || ||||||||||| || || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 31634 acggtgatttcaatgccttcccaagaagactcagagagggatgtcaaagaactggagtca 31575
Query: 525 aacttgtcgatgttccaaatgggcggaaagatgctgctgataaggctatactggtagata 584
||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 31574 aacttgttgatgttccaaatggaaggaaagatgctgctgataaggctatactggttgata 31515
Query: 585 tgtttctctttgctctggacaatcatccaccgtcatccattatgcttatatctggtgatg 644
||||||| ||||| ||||||||| |||||| |||||||||||||||||||| ||||| |
Sbjct: 31514 tgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacg 31455
Query: 645 tggactttgctcctgctctccatatacttggtcagcgtggatacactattgcccttgcaa 704
|||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || |
Sbjct: 31454 tggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggcca 31395
Query: 705 ttccatcttcagttaccgtctcatcggctttgagcagtgctgggagtttcgtgtgggact 764
||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||
Sbjct: 31394 ttccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggact 31335
Query: 765 ggcctagtcttgcccgtggtgcaggcagtgtaccccccagatccttagggc 815
||||||||||||| ||||||| ||| | ||| |||| |||||| ||||||
Sbjct: 31334 ggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggc 31284
Score = 291 bits (147), Expect = 5e-75
Identities = 323/381 (84%), Gaps = 3/381 (0%)
Strand = Plus / Minus
Query: 1033 tggcacatcatcgagttcacatcatgtatcaggtggtttgaatgaagtcccagtgataga 1092
|||||||||||| || |||||| || || || || |||||||||||| |||| ||||
Sbjct: 31072 tggcacatcatcaaggtcacataatttagcatgtagtttgaatgaaggtccagatgtaga 31013
Query: 1093 ccaaggatttacaggcgaacaatcatggtgggttcgtcctggtgatcttcaaggcttgaa 1152
|||||| || ||| || | |||||||||||||||||||||||||||||||| |||||
Sbjct: 31012 ccaaggtttgccagatgagcggtcatggtgggttcgtcctggtgatcttcaaggtttgaa 30953
Query: 1153 aggtcaactaataaggttatttcagttatctggtggatctgttccacttgtccgtgttcc 1212
|| ||| | | |||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 30952 gggccaattgttgcggttgtttgagttatcaggtggatctgttccacttgtccgtgttcc 30893
Query: 1213 ttcagagtatttaaagctcttcggaaggcacctgtatgtagcagaatatggagctgtaaa 1272
|||||| ||| |||| ||||| ||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 30892 ttcagaatatctaaaactctttggaagacacctctatgtatcagaatatggagctgttaa 30833
Query: 1273 acttgttcatcttttcgaaaagctggctgagtcttttgtcgtcatagggaagggtcagag 1332
|||| ||||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 30832 acttattcatctctttgaaaagcttgctgactcttttgtggtcatagggaagggtcatag 30773
Query: 1333 aaagatgatttgcctccgcaattctggtgataggaac---atgaaatatccaagcacacc 1389
|||| |||||||||| || |||||||||||||| ||| | ||||||| ||| ||||||
Sbjct: 30772 aaaggtgatttgccttcgaaattctggtgatagtaacctgaagaaatattcaaccacacc 30713
Query: 1390 aataattttgaaaaatgaaaa 1410
||| ||||||||||| |||||
Sbjct: 30712 aattattttgaaaaaggaaaa 30692
Score = 119 bits (60), Expect = 4e-23
Identities = 218/270 (80%), Gaps = 3/270 (1%)
Strand = Plus / Minus
Query: 1447 aacatgtcagcagttgagcagctcatcagaagatctctcagaggatgaacagaacattaa 1506
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 30655 aacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaa 30596
Query: 1507 ccctggcgtagatggaacatatgtgtttgatagccatctatacaagtgcagaacagaggt 1566
||| | ||||||||| |||||| || |||||||||||| |||| | |||| ||| |
Sbjct: 30595 cccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagat 30536
Query: 1567 cgaggctcttcttgtctgttacttgtcgtgccctcttccactctcccattttgagtccct 1626
||| ||||||||||||||| || |||||| ||||||| |||| |||| ||
Sbjct: 30535 tcaggagcttcttgtctgttac---tcttgccctgttccactgggtaatttcaagtctct 30479
Query: 1627 gtatgagcaacggtacaagaagactctcgactaccagagctgtggagttgatggtctgga 1686
||||| |||||||||||||||||||| ||| |||||| ||| || |||||||||||
Sbjct: 30478 ctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctgga 30419
Query: 1687 ggaactgcttaacaagttaaaagatgttgt 1716
||| || || | ||| |||||||||||||
Sbjct: 30418 ggagctagttgagaaggtaaaagatgttgt 30389
Score = 79.8 bits (40), Expect = 4e-11
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 869 cctgacatacagactgaagaggaggccattgtttatatgggaactttgaggaatgaatat 928
||||||| |||| |||||||||||||||||| || |||||||||| || |||||||
Sbjct: 31230 cctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgc 31171
Query: 929 ggtgggagaacaaccagcaaccagattaactgctataactcttc 972
|||| ||||| |||||||||||||| | ||||||||||||||
Sbjct: 31170 agtggtagaactaccagcaaccagatatattgctataactcttc 31127
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 182 atgtcttttgaagataaagcaatggctagtcgtattacctcaccctcactaaaagctaca 241
||||||||||||||||||||||||||||| ||| | | |||||||||| |||| |||
Sbjct: 31920 atgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatg 31861
Query: 242 gtatcagaatcaga 255
| |||||||||||
Sbjct: 31860 gcttcagaatcaga 31847
Score = 44.1 bits (22), Expect = 2.0
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1926 gcacagcaaatgcttgtaataatatctcgttctgctaatcta 1967
|||||| |||||||||||||||| | || || ||||||||||
Sbjct: 29998 gcacagaaaatgcttgtaataatttatcattatgctaatcta 29957
>dbj|AK107589.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-131-A04, full
insert sequence
Length = 2286
Score = 537 bits (271), Expect = e-149
Identities = 466/531 (87%)
Strand = Plus / Plus
Query: 285 tggatcattctcaagcaaataaccagacaagtgtagtcctcggtccagtggctatctttt 344
|||| ||||||||||||||||||||| || | ||| || |||||||||||||||||||
Sbjct: 315 tggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatctttt 374
Query: 345 gggacattgagaattgccctgttccaagtgatgtacggccagatgatgttgcagggaata 404
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 375 gggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatg 434
Query: 405 tacggatggcattacggctgcatcctgttgttaacggtgcagttacagttctctctgctt 464
| ||||||||||||||||| |||||||||||||| ||||| || ||| | |||||||| |
Sbjct: 435 tccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcat 494
Query: 465 atggagatttcaatgcttttcctagaagactcagggagggatgtcagagaacaggagtca 524
| || ||||||||||| | || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 495 acggtgatttcaatgcctccccaagaagactcagagagggatgtcaaagaactggagtca 554
Query: 525 aacttgtcgatgttccaaatgggcggaaagatgctgctgataaggctatactggtagata 584
||||||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct: 555 aacttgttgatgttccaaatggaaggaaagatgctgctgataaggctacactggttgata 614
Query: 585 tgtttctctttgctctggacaatcatccaccgtcatccattatgcttatatctggtgatg 644
||||||| ||||| ||||||||| |||||| |||||||||||||||||||| ||||| |
Sbjct: 615 tgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacg 674
Query: 645 tggactttgctcctgctctccatatacttggtcagcgtggatacactattgcccttgcaa 704
|||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || |
Sbjct: 675 tggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggcca 734
Query: 705 ttccatcttcagttaccgtctcatcggctttgagcagtgctgggagtttcgtgtgggact 764
||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||
Sbjct: 735 ttccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggact 794
Query: 765 ggcctagtcttgcccgtggtgcaggcagtgtaccccccagatccttagggc 815
||||||||||||| ||||||| ||| | ||| |||| |||||| ||||||
Sbjct: 795 ggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggc 845
Score = 287 bits (145), Expect = 8e-74
Identities = 261/299 (87%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 1115 tcatggtgggttcgtcctggtgatcttcaaggcttgaaaggtcaactaataaggttattt 1174
|||||||||||||||||||||||||||||||| ||||| || ||| | | |||| |||
Sbjct: 1139 tcatggtgggttcgtcctggtgatcttcaaggtttgaagggccaattgttgcggttgttt 1198
Query: 1175 cagttatctggtggatctgttccacttgtccgtgttccttcagagtatttaaagctcttc 1234
||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 1199 gagttatcaggtggatctgttccacttgtccgtgttccttcagaatatctaaaactcttt 1258
Query: 1235 ggaaggcacctgtatgtagcagaatatggagctgtaaaacttgttcatcttttcgaaaag 1294
||||| ||||| |||||| |||||||||||||||| |||||| ||||||| || ||||||
Sbjct: 1259 ggaagacacctctatgtatcagaatatggagctgttaaacttattcatctctttgaaaag 1318
Query: 1295 ctggctgagtcttttgtcgtcatagggaagggtcagagaaagatgatttgcctccgcaat 1354
|| ||||| |||||||| ||||||||||||||||| |||||| |||||||||| || |||
Sbjct: 1319 cttgctgactcttttgtggtcatagggaagggtcatagaaaggtgatttgccttcgaaat 1378
Query: 1355 tctggtgataggaac---atgaaatatccaagcacaccaataattttgaaaaatgaaaa 1410
||||||||||| ||| | ||||||| ||| ||||||||| ||||||||||| |||||
Sbjct: 1379 tctggtgatagtaacctgaagaaatattcaaccacaccaattattttgaaaaaggaaaa 1437
Score = 119 bits (60), Expect = 4e-23
Identities = 218/270 (80%), Gaps = 3/270 (1%)
Strand = Plus / Plus
Query: 1447 aacatgtcagcagttgagcagctcatcagaagatctctcagaggatgaacagaacattaa 1506
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1474 aacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaa 1533
Query: 1507 ccctggcgtagatggaacatatgtgtttgatagccatctatacaagtgcagaacagaggt 1566
||| | ||||||||| |||||| || |||||||||||| |||| | |||| ||| |
Sbjct: 1534 cccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagat 1593
Query: 1567 cgaggctcttcttgtctgttacttgtcgtgccctcttccactctcccattttgagtccct 1626
||| ||||||||||||||| || |||||| ||||||| |||| |||| ||
Sbjct: 1594 tcaggagcttcttgtctgttac---tcttgccctgttccactgggtaatttcaagtctct 1650
Query: 1627 gtatgagcaacggtacaagaagactctcgactaccagagctgtggagttgatggtctgga 1686
||||| |||||||||||||||||||| ||| |||||| ||| || |||||||||||
Sbjct: 1651 ctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctgga 1710
Query: 1687 ggaactgcttaacaagttaaaagatgttgt 1716
||| || || | ||| |||||||||||||
Sbjct: 1711 ggagctagttgagaaggtaaaagatgttgt 1740
Score = 79.8 bits (40), Expect = 4e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 869 cctgacatacagactgaagaggaggccattgtttatatgggaactttgaggaatgaatat 928
||||||| |||| |||||||||||||||||| || |||||||||| || |||||||
Sbjct: 899 cctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgc 958
Query: 929 ggtgggagaacaaccagcaaccagattaactgctataactcttc 972
|||| ||||| |||||||||||||| | ||||||||||||||
Sbjct: 959 agtggtagaactaccagcaaccagatatattgctataactcttc 1002
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 182 atgtcttttgaagataaagcaatggctagtcgtattacctcaccctcactaaaagctaca 241
||||||||||||||||||||||||||||| ||| | | |||||||||| |||| |||
Sbjct: 209 atgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatg 268
Query: 242 gtatcagaatcaga 255
| |||||||||||
Sbjct: 269 gcttcagaatcaga 282
Score = 44.1 bits (22), Expect = 2.0
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1926 gcacagcaaatgcttgtaataatatctcgttctgctaatcta 1967
|||||| |||||||||||||||| | || || ||||||||||
Sbjct: 2131 gcacagaaaatgcttgtaataatttatcattatgctaatcta 2172
>dbj|AP005410.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0038P10
Length = 148527
Score = 119 bits (60), Expect = 4e-23
Identities = 218/270 (80%), Gaps = 3/270 (1%)
Strand = Plus / Minus
Query: 1447 aacatgtcagcagttgagcagctcatcagaagatctctcagaggatgaacagaacattaa 1506
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 148376 aacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaa 148317
Query: 1507 ccctggcgtagatggaacatatgtgtttgatagccatctatacaagtgcagaacagaggt 1566
||| | ||||||||| |||||| || |||||||||||| |||| | |||| ||| |
Sbjct: 148316 cccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagat 148257
Query: 1567 cgaggctcttcttgtctgttacttgtcgtgccctcttccactctcccattttgagtccct 1626
||| ||||||||||||||| || |||||| ||||||| |||| |||| ||
Sbjct: 148256 tcaggagcttcttgtctgttac---tcttgccctgttccactgggtaatttcaagtctct 148200
Query: 1627 gtatgagcaacggtacaagaagactctcgactaccagagctgtggagttgatggtctgga 1686
||||| |||||||||||||||||||| ||| |||||| ||| || |||||||||||
Sbjct: 148199 ctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctgga 148140
Query: 1687 ggaactgcttaacaagttaaaagatgttgt 1716
||| || || | ||| |||||||||||||
Sbjct: 148139 ggagctagttgagaaggtaaaagatgttgt 148110
Score = 105 bits (53), Expect = 6e-19
Identities = 100/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 1299 ctgagtcttttgtcgtcatagggaagggtcagagaaagatgatttgcctccgcaattctg 1358
|||| |||||||| ||||||||||||||||| |||||| |||||||||| || |||||||
Sbjct: 148527 ctgactcttttgtggtcatagggaagggtcatagaaaggtgatttgccttcgaaattctg 148468
Query: 1359 gtgataggaac---atgaaatatccaagcacaccaataattttgaaaaatgaaaa 1410
||||||| ||| | ||||||| ||| ||||||||| ||||||||||| |||||
Sbjct: 148467 gtgatagtaacctgaagaaatattcaaccacaccaattattttgaaaaaggaaaa 148413
Score = 44.1 bits (22), Expect = 2.0
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1926 gcacagcaaatgcttgtaataatatctcgttctgctaatcta 1967
|||||| |||||||||||||||| | || || ||||||||||
Sbjct: 147719 gcacagaaaatgcttgtaataatttatcattatgctaatcta 147678
>ref|NM_153404.1 | Mus musculus lipase, member H (Liph), mRNA
gb|BC037489.1| Mus musculus lipase, member H, mRNA (cDNA clone MGC:47395
IMAGE:4487939), complete cds
Length = 2077
Score = 42.1 bits (21), Expect = 7.8
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1660 ccagagctgtggagttgatggtctg 1684
|||||||||||||||||||| ||||
Sbjct: 278 ccagagctgtggagttgatgatctg 254
>emb|AL162591.16 | Human DNA sequence from clone RP11-350G8 on chromosome 1 Contains the 3'
end of the AQP10 gene for aquaporin 10, the ATP8B2 gene for
ATPase, Class I, type 8B, member 2, a mitochondrial
ribosomal protein S33 (MRPS33) pseudogene, a novel gene,
the IL6R gene for interleukin 6 receptor, a proteasome
(prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8)
pseduogene, a novel gene (LOC126669), the 5' end of a novel
gene (DKFZp434M202) and a CpG island, complete sequence
Length = 201167
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 tgaagataaagcaatggctag 210
|||||||||||||||||||||
Sbjct: 127787 tgaagataaagcaatggctag 127767
>emb|BX004769.9 | Zebrafish DNA sequence from clone DKEY-15I8 in linkage group 9,
complete sequence
Length = 154745
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1391 ataattttgaaaaatgaaaag 1411
|||||||||||||||||||||
Sbjct: 52600 ataattttgaaaaatgaaaag 52620
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1391 ataattttgaaaaatgaaaag 1411
|||||||||||||||||||||
Sbjct: 52865 ataattttgaaaaatgaaaag 52885
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1391 ataattttgaaaaatgaaaag 1411
|||||||||||||||||||||
Sbjct: 52898 ataattttgaaaaatgaaaag 52918
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1391 ataattttgaaaaatgaaaag 1411
|||||||||||||||||||||
Sbjct: 52997 ataattttgaaaaatgaaaag 53017
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1391 ataattttgaaaaatgaaaag 1411
|||||||||||||||||||||
Sbjct: 53030 ataattttgaaaaatgaaaag 53050
>gb|AF015889.1 | Synechococcus PCC7002 carbon dioxide concentrating mechanism proteins
(ccmK), (ccmL), (ccmM), and (ccmN) genes, complete cds,
and ribulose bisphosphate carboxylase/oxygenase large
subunit gene, partial cds
Length = 4425
Score = 42.1 bits (21), Expect = 7.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 acgtcacctcgaaggttgtct 36
|||||||||||||||||||||
Sbjct: 3013 acgtcacctcgaaggttgtct 3033
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 384,012,846
Number of extensions: 20285268
Number of successful extensions: 108992
Number of sequences better than 10.0: 60
Number of HSP's gapped: 108972
Number of HSP's successfully gapped: 94
Length of query: 2044
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2021
Effective length of database: 18,503,978,556
Effective search space: 37396540661676
Effective search space used: 37396540661676
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)