ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf133e12 |
|---|---|
| Clone Library Name | barley_pub |
>AK109417:Os01g0142200 | Length = 172 Score = 271 bits (693), Expect = 5e-73 Identities = 141/172 (81%), Positives = 153/172 (88%) Frame = +1 Query: 205 MRSFPVAGGRSVTLALFSDVSNSRELLDLMQSGKLEPEAAFLNASLVPDVFPVXXXXXXX 384 M+SFPVAGGRSV+L LFSDVSNS ELL+LMQSGKLEPE AFLNASLVPDVFPV Sbjct: 1 MKSFPVAGGRSVSLGLFSDVSNSWELLELMQSGKLEPEVAFLNASLVPDVFPVLAAAHKA 60 Query: 385 XXXXXREALTTRTLHSELVYNCSGSKHITESLKRCGIADDTQYILAARFDASDEEMKALE 564 RE+LTTRTLHSELVYN SGSKHITESLKRCGI+DDT YILAARFDAS+EE+KA+E Sbjct: 61 VVSQGRESLTTRTLHSELVYNYSGSKHITESLKRCGISDDTSYILAARFDASNEEIKAVE 120 Query: 565 KLISGTEIDLSELETRADQPKILKQYKITPQELSISTLPEAIVCRIAARDAL 720 KLI GTEIDL+ELETRA+QP+ILK YKITPQELSISTLP+AIVCRIAARDAL Sbjct: 121 KLICGTEIDLAELETRANQPQILKHYKITPQELSISTLPDAIVCRIAARDAL 172
>AK103082:Os01g0142200 | Length = 172 Score = 271 bits (693), Expect = 5e-73 Identities = 141/172 (81%), Positives = 153/172 (88%) Frame = +1 Query: 205 MRSFPVAGGRSVTLALFSDVSNSRELLDLMQSGKLEPEAAFLNASLVPDVFPVXXXXXXX 384 M+SFPVAGGRSV+L LFSDVSNS ELL+LMQSGKLEPE AFLNASLVPDVFPV Sbjct: 1 MKSFPVAGGRSVSLGLFSDVSNSWELLELMQSGKLEPEVAFLNASLVPDVFPVLAAAHKA 60 Query: 385 XXXXXREALTTRTLHSELVYNCSGSKHITESLKRCGIADDTQYILAARFDASDEEMKALE 564 RE+LTTRTLHSELVYN SGSKHITESLKRCGI+DDT YILAARFDAS+EE+KA+E Sbjct: 61 VVSQGRESLTTRTLHSELVYNYSGSKHITESLKRCGISDDTSYILAARFDASNEEIKAVE 120 Query: 565 KLISGTEIDLSELETRADQPKILKQYKITPQELSISTLPEAIVCRIAARDAL 720 KLI GTEIDL+ELETRA+QP+ILK YKITPQELSISTLP+AIVCRIAARDAL Sbjct: 121 KLICGTEIDLAELETRANQPQILKHYKITPQELSISTLPDAIVCRIAARDAL 172
>AK120222:Os07g0596300 | Length = 754 Score = 34.7 bits (78), Expect = 0.10 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 5/46 (10%) Frame = -3 Query: 199 AQMGAPPLCLVASGRPFSASLPPPGVAFS-----PLPLARLGAPVP 77 A+ G PP GRP + LPPPG S P P RLGAP P Sbjct: 201 ARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPP 246
>AK100819:Os01g0256900 | Length = 147 Score = 34.3 bits (77), Expect = 0.14 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +3 Query: 66 RRPQGTGAPSRARGRGEKATPGGGREAEKGRPDATKQRGG 185 RRP G G R RGRG+ T GGR +G+ D + GG Sbjct: 90 RRPPGVG---RGRGRGDIGTKPGGRGIGRGQDDGGSKGGG 126
>AK106287:Os02g0108100 | Length = 390 Score = 33.9 bits (76), Expect = 0.18 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 77 GHRSPEPRQRERGEGDAG----RRKGGREGP--ARRHQAEGRR 187 G SP P E GEG +G R +GGRE P RR + GRR Sbjct: 128 GADSPNPEAEEAGEGGSGAERCRGRGGREAPGRGRRARRHGRR 170 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3 Query: 78 GTGAPSRARGRGEKATPGGGREAEKGRPDATKQRGGA 188 G+GA R RGRG + PG GR A + ++RGGA Sbjct: 143 GSGA-ERCRGRGGREAPGRGRRARR----HGRRRGGA 174
>Os06g0174300:Os06g0174300 | Length = 1798 Score = 32.3 bits (72), Expect = 0.52 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +3 Query: 78 GTGAPSRARGRGEK--ATPGGGREAEKGRPDATKQRGGA 188 G G+ R GRG A GGG E +G+ +QRGGA Sbjct: 202 GGGSDGRRGGRGRSWSAAAGGGGEWRRGKERGARQRGGA 240
>Y07956:Os01g0633500 | Length = 323 Score = 31.6 bits (70), Expect = 0.88 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 10/47 (21%) Frame = +2 Query: 80 HRSPEPRQRER----------GEGDAGRRKGGREGPARRHQAEGRRS 190 HR PRQ +R GEG G R+G R GP +RH RR+ Sbjct: 109 HRLLPPRQDDRMDVLRVQVIGGEGRHGIREGARAGPHQRHPHARRRA 155
>AB003496:Os01g0633500 | Length = 323 Score = 31.6 bits (70), Expect = 0.88 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 10/47 (21%) Frame = +2 Query: 80 HRSPEPRQRER----------GEGDAGRRKGGREGPARRHQAEGRRS 190 HR PRQ +R GEG G R+G R GP +RH RR+ Sbjct: 109 HRLLPPRQDDRMDVLRVQVIGGEGRHGIREGARAGPHQRHPHARRRA 155
>Os01g0113100:Os01g0113100 | Length = 1851 Score = 31.6 bits (70), Expect = 0.89 Identities = 29/100 (29%), Positives = 48/100 (48%) Frame = +1 Query: 466 ITESLKRCGIADDTQYILAARFDASDEEMKALEKLISGTEIDLSELETRADQPKILKQYK 645 + +L GI DD + + SDE+ ALE L+S ++ L P+ L ++ Sbjct: 1739 LAPTLHELGIKDDVDRVSSF----SDEQEGALELLVSLKKLSFDGLWVLQSLPEGLHKFP 1794 Query: 646 ITPQELSISTLPEAIVCRIAARDAL*GLKTMVRTFSSYVC 765 + ELSIS P+ + ++ GL T + TFS ++C Sbjct: 1795 -SLTELSISHCPQI---QSLPKN---GLPTSLETFSVFIC 1827
>Os01g0112800:Os01g0112800 | Length = 1344 Score = 31.6 bits (70), Expect = 0.89 Identities = 29/100 (29%), Positives = 48/100 (48%) Frame = +1 Query: 466 ITESLKRCGIADDTQYILAARFDASDEEMKALEKLISGTEIDLSELETRADQPKILKQYK 645 + +L GI DD + + SDE+ ALE L+S ++ L P+ L ++ Sbjct: 1232 LAPTLHELGIKDDVDRVSSF----SDEQEGALELLVSLKKLSFDGLWVLQSLPEGLHKFP 1287 Query: 646 ITPQELSISTLPEAIVCRIAARDAL*GLKTMVRTFSSYVC 765 + ELSIS P+ + ++ GL T + TFS ++C Sbjct: 1288 -SLTELSISHCPQI---QSLPKN---GLPTSLETFSVFIC 1320
>AK071215:Os02g0600100 | Length = 388 Score = 31.6 bits (70), Expect = 0.89 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 13/79 (16%) Frame = +1 Query: 454 GSKHITESLKRCGIADDTQYILAARFDASDEEMKALEKLISGTEIDLSELETR------- 612 G + ESL G+ + +LA DEE++ L++ I+ E +L E E R Sbjct: 48 GMAPLFESLAAAGVLEPDDALLAEMRARIDEEVRKLDEKIADAEENLGESEVREAHLAKS 107 Query: 613 ------ADQPKILKQYKIT 651 ++ K L+Q K+T Sbjct: 108 LYFMRVGEKEKALEQLKVT 126
>AK100049:Os10g0370000 | Length = 465 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = -2 Query: 476 DSVICLEPEQL*TSSECRVLVVSASLDLESSALCAAARTGNTSGTSDALRKAASGSSFPD 297 D+ EPE E V + LD E A TSG DA +A+ GS+ D Sbjct: 100 DAAAAAEPEARDGGGEGEVTATATGLDAEEVVASGGAEATATSGLEDAGEEASDGSTARD 159
>AK071987:Os10g0370000 | Length = 465 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = -2 Query: 476 DSVICLEPEQL*TSSECRVLVVSASLDLESSALCAAARTGNTSGTSDALRKAASGSSFPD 297 D+ EPE E V + LD E A TSG DA +A+ GS+ D Sbjct: 100 DAAAAAEPEARDGGGEGEVTATATGLDAEEVVASGGAEATATSGLEDAGEEASDGSTARD 159
>AK099793:Os05g0563400 | Length = 264 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +2 Query: 86 SPEPRQRERGEGDAGRRKGGREGP-ARRHQAEGR 184 S PR+R RG G GRR R P RRH GR Sbjct: 139 SRAPRRRARGGGGRGRRAAARLLPRRRRHPPRGR 172
>AB071290:Os05g0563400 | Length = 223 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +2 Query: 86 SPEPRQRERGEGDAGRRKGGREGP-ARRHQAEGR 184 S PR+R RG G GRR R P RRH GR Sbjct: 98 SRAPRRRARGGGGRGRRAAARLLPRRRRHPPRGR 131
>Os01g0810600:Os01g0810600 | Length = 893 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 633 EAIQNNSTGTVNIHTPRGNRVQDRCSRRP 719 E+I+ NS+GT + P G+ Q C R P Sbjct: 750 ESIEGNSSGTTELRYPSGSSGQPTCRRPP 778
>AK120240: | Length = 823 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 84 GAPSRARGRGEKATPGGGREAEKGRPDATKQRGG 185 GA S ARGRG GGG + R ++ GG Sbjct: 93 GATSAARGRGRGGVSGGGERRGRRRRGRGEEEGG 126
>AK119817: | Length = 931 Score = 29.3 bits (64), Expect = 4.4 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -3 Query: 190 GAPPLCLVASGRPFSASLPPPGVAFSPLPL 101 G PP + G P+ PPPG P+P+ Sbjct: 718 GPPPPQSLPHGHPYGGGHPPPGAPGGPMPM 747
>Os06g0237800:Os06g0237800 | Length = 505 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +2 Query: 77 GHRSPEPRQRERGEGDAGRRKGGREGPAR 163 GH E R + GEG GR G EGP R Sbjct: 184 GHGGFEVRVVQVGEGGPGRHGGAEEGPVR 212
>AK099688:Os05g0215600 | Length = 148 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +3 Query: 63 ARRPQGTGAPSRARGRG----EKATPGGGREAEKGRPDATKQRG 182 ARRP G RARG A PGGG + E+ + +++G Sbjct: 13 ARRPSPCGGHRRARGGARFSVSAAAPGGGVKEEEEEEEEEEEKG 56
>AK067260:Os09g0462700 | Length = 441 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +3 Query: 66 RRPQGTGAPSRARGRGEKATPGGGREAEKGRPDATKQRGG 185 RR +G GA + A G G A PGG A A + GG Sbjct: 43 RRRRGRGAEAAAGGGGAAAAPGGAAAAASLGGHAVRAPGG 82
>AK066642:Os05g0215600 | Length = 300 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +3 Query: 63 ARRPQGTGAPSRARGRG----EKATPGGGREAEKGRPDATKQRG 182 ARRP G RARG A PGGG + E+ + +++G Sbjct: 13 ARRPSPCGGHRRARGGARFSVSAAAPGGGVKEEEEEEEEEEEKG 56
>Os03g0427900:Os03g0427900 | Length = 1036 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 409 LTTRTLHSELVYNCSGSKHITESLKRCGIADDTQYILAARFDAS-----DEEMKALEKLI 573 +T R L+ L+ S KHI + L RC DD A R D+++K LEK++ Sbjct: 478 MTARVLNLGLMKALSDFKHIAQDLARC--QDDLDSNRAMRDQGGGSAQLDQDIKRLEKIV 535
>Os10g0557600:Os10g0557600 | Length = 387 Score = 28.5 bits (62), Expect = 7.5 Identities = 28/116 (24%), Positives = 38/116 (32%) Frame = -2 Query: 410 SASLDLESSALCAAARTGNTSGTSDALRKAASGSSFPDCIXXXXXRLLETSEKRARVTLR 231 SA + ++A AA G +S D+ AA G KR+R T Sbjct: 165 SAHAAMAAAAASAANNGGGSSAGQDSCLTAAPGRG--------------ARSKRSRATAA 210 Query: 230 PPATGKLLMPRSDGSASPLLGGVGPAXXXXXXXXXXXXXXXXSGAARGSGALGPAG 63 A L+PR +SP G +RG + GPAG Sbjct: 211 AAAAWHSLVPRPPSQSSPSSSCSSSDFPSSNKPSGTARPNGSGGGSRGKKSPGPAG 266
>Os05g0549900:Os05g0549900 | Length = 369 Score = 28.5 bits (62), Expect = 7.5 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Frame = -3 Query: 139 LPPPGVAFSPLPLA-RLGAPVPWGR 68 +PPP A SP P A RLGAP P+ R Sbjct: 1 MPPPPPATSPAPAAIRLGAPHPYLR 25
>Os02g0250600:Os02g0250600 | Length = 471 Score = 28.5 bits (62), Expect = 7.5 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +2 Query: 107 ERGEGDAGRRKGGREGPARRHQAEGRRSH 193 E G G GG+EG +++ EGR+ H Sbjct: 97 EEGHGGGKAETGGQEGVTAKNRGEGRQQH 125
>AK121504:Os06g0157800 | Length = 122 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/75 (26%), Positives = 26/75 (34%) Frame = +3 Query: 99 ARGRGEKATPGGGREAEKGRPDATKQRGGAPI*ARHEEXXXXXXXXXXXXXXXXXXXXXX 278 A +GE A G G+ A G + K++GG AR E Sbjct: 44 AAKKGEAAAGGAGKGAAAGEEEEEKKKGGDAGDARKEGEDGGGGGGEYVNKDTGEIGGPR 103 Query: 279 APRPDAVGEAGAGGR 323 P P G+ GGR Sbjct: 104 GPEPTRYGDWERGGR 118
>AK110821:Os01g0223600 | Length = 492 Score = 28.5 bits (62), Expect = 7.5 Identities = 18/62 (29%), Positives = 25/62 (40%) Frame = -2 Query: 818 PPRASPSTGGVRPKKRIRHT*LENVLTIVLRPQRASRAAILHTIASGSVDIDSSCGVILY 639 PP SP+ G K+R+ R S+AAIL + G V + + V L Sbjct: 84 PPSGSPAAAGAPAKRRV----------------RLSQAAILAIVVGGCVAVSAVIAVFLI 127 Query: 638 CF 633 F Sbjct: 128 AF 129
>AK072367:Os08g0175200 | Length = 561 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/71 (28%), Positives = 31/71 (43%) Frame = +1 Query: 469 TESLKRCGIADDTQYILAARFDASDEEMKALEKLISGTEIDLSELETRADQPKILKQYKI 648 TE + CG+ +L+ R D +MK L+++ EID T + K + Sbjct: 146 TELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATETEYLKPHEDLLN 205 Query: 649 TPQELSISTLP 681 P + STLP Sbjct: 206 GPTYFNGSTLP 216
>Os11g0657400:Os11g0657400 | Length = 1399 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -3 Query: 187 APPLCLVASGRPFSASLPPPGVAFSPLPLAR-LGAPVP 77 +PP AS P SLPPP P P + L PVP Sbjct: 1104 SPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVP 1141
>Os09g0299500:Os09g0299500 | Length = 501 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +3 Query: 78 GTGAPSRARGRGEKATPGGGREAEKGRP 161 G G R RGRG GG R A G P Sbjct: 266 GAGGGGRGRGRGSDDAKGGSRAAAVGGP 293
>Os05g0371100:Os05g0371100 | Length = 1510 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +3 Query: 129 GGGREAEKGRPDATKQRGGAPI*ARHE 209 GG REAE+G A + RG A ARHE Sbjct: 7 GGRREAEEGVAVAGRSRGVAAAAARHE 33
>AK105206:Os02g0724200 | Length = 121 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +3 Query: 69 RPQGTGAPSRARGRGEKATPGGGREAEKGRP 161 RP+ G P RARGRG GGGR + P Sbjct: 92 RPERRGKPLRARGRG-----GGGRRRQALSP 117
>AK073497:Os05g0153000 | Length = 849 Score = 28.1 bits (61), Expect = 9.7 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = -2 Query: 335 ALRKAASGSSFPDCIXXXXXRLLETSEKRARV-TLRPPATGKLLMPRSDGSASPLLGGVG 159 +LRK++S SS P T E+RA T +TGKLL RS + SP L Sbjct: 744 SLRKSSS-SSLPRRSPGTSSSEPTTPEQRAAARTFASASTGKLLRERSPAALSPSLSTPS 802 Query: 158 PAXXXXXXXXXXXXXXXXSGAARGSGALGPAGW 60 P+ +R S + PA W Sbjct: 803 PSP-----------------RSRSSASSSPASW 818
>AK072110:Os08g0431100 | Length = 167 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/41 (46%), Positives = 21/41 (51%) Frame = +3 Query: 72 PQGTGAPSRARGRGEKATPGGGREAEKGRPDATKQRGGAPI 194 P G+G R RGRGE A GGG AE P A RG + Sbjct: 69 PPGSGRGRRRRGRGEGAC-GGGAGAE---PAAHVVRGAGAV 105
>AK072095:Os05g0153000 | Length = 849 Score = 28.1 bits (61), Expect = 9.7 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = -2 Query: 335 ALRKAASGSSFPDCIXXXXXRLLETSEKRARV-TLRPPATGKLLMPRSDGSASPLLGGVG 159 +LRK++S SS P T E+RA T +TGKLL RS + SP L Sbjct: 744 SLRKSSS-SSLPRRSPGTSSSEPTTPEQRAAARTFASASTGKLLRERSPAALSPSLSTPS 802 Query: 158 PAXXXXXXXXXXXXXXXXSGAARGSGALGPAGW 60 P+ +R S + PA W Sbjct: 803 PSP-----------------RSRSSASSSPASW 818
>AK100466:Os01g0698100 | Length = 900 Score = 28.1 bits (61), Expect = 9.8 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 840 SSGLKHPAATSFTIDRRCPSKEKNSTHIAGK-RPDHRFKTSEGVSSSD 700 SS K ++S DRR PS+ K S H G+ + R TS+ SS D Sbjct: 450 SSEHKDRRSSSEQKDRRSPSERKGSNHGKGESKSKKRSSTSKDASSPD 497 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,790,892 Number of extensions: 580026 Number of successful extensions: 3154 Number of sequences better than 10.0: 37 Number of HSP's gapped: 3118 Number of HSP's successfully gapped: 38 Length of query: 325 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 224 Effective length of database: 11,355,714 Effective search space: 2543679936 Effective search space used: 2543679936 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
