| Clone Name | FLbaf130n23 |
|---|---|
| Clone Library Name | barley_pub |
>Q5AXV1:MCH1_EMENI Probable transporter mch1 - Emericella nidulans (Aspergillus| nidulans) Length = 615 Score = 41.6 bits (96), Expect = 0.012 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%) Frame = +1 Query: 1216 SISRTASMASLMAPMAGAFFLLLDP----RDMLLYASTAVIGTCTGAITSVAVSATSELF 1383 ++SR A + ++ F LL P L + +TA++G G+I S+ S ++ Sbjct: 473 ALSRLAFLIPSALLLSLGFLLLASPLPTHHPELSHLTTALVGLGYGSIFSLVPIIISVVW 532 Query: 1384 GTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGS----NSCVGAACY 1524 G +NFG N ++ G+ +G + + YQ A GS C G C+ Sbjct: 533 GVENFGTNWGIVAMFPAAGAAMWGVIYSRAYQSAADGSPTDDGQCHGWKCF 583
>Q4IM48:MCH1_GIBZE Probable transporter MCH1 - Gibberella zeae (Fusarium graminearum)| Length = 572 Score = 38.5 bits (88), Expect = 0.098 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%) Frame = +1 Query: 1207 SGYSISRTASMASLMAPMAGAFFLL----LDPRDMLLYASTAVIGTCTGAITSVAVSATS 1374 S +SISR A MA + ++ +L + + + ++G GAI S+ + Sbjct: 417 SRFSISRVAFMAFFASMLSIGLLILASGLVQNHAERFWLVSGLVGAGYGAIFSLTPLMVT 476 Query: 1375 ELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSNS-----------CVGAAC 1521 ++G +NF N+ ++ GS +G + + YQ A S + C G C Sbjct: 477 IIWGVENFATNYGLIGMLPAAGSTFWGLVYSATYQNGANKSKAGPEGSDRDDLFCYGEQC 536 Query: 1522 YRDTF 1536 Y T+ Sbjct: 537 YAPTY 541
>Q4WVT3:MCH1_ASPFU Probable transporter mch1 - Aspergillus fumigatus (Sartorya fumigata)| Length = 619 Score = 38.5 bits (88), Expect = 0.098 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%) Frame = +1 Query: 1216 SISRTASMASLMAPMAGAFFLLLDPRDM----LLYASTAVIGTCTGAITSVAVSATSELF 1383 ++SR A + ++ + LL P + L + +TA+IG G+ S+ S ++ Sbjct: 476 TLSRLAFLLPSALLLSLGYLLLSSPLPLQHPGLSHVTTALIGLGYGSAFSLVPIIISVVW 535 Query: 1384 GTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSN-----SCVGAACY 1524 G +NFG N ++ G+ +G + + YQ G N C G CY Sbjct: 536 GVENFGTNWGIVAMVPAAGAAMWGVIYSRGYQDATDGGNGSPDGQCHGWRCY 587
>P37662:YHJX_ECOLI Inner membrane protein yhjX - Escherichia coli| Length = 402 Score = 36.2 bits (82), Expect = 0.49 Identities = 24/86 (27%), Positives = 35/86 (40%) Frame = +1 Query: 1210 GYSISRTASMASLMAPMAGAFFLLLDPRDMLLYASTAVIGTCTGAITSVAVSATSELFGT 1389 G IS A L AP+ F +A+ A + G +V S SE FG Sbjct: 286 GQVISLVGMAALLFAPLNAVTF----------FAAIACVAFNFGGTITVFPSLVSEFFGL 335 Query: 1390 KNFGVNHNVLVANIPVGSLCFGYLAA 1467 N N+ V+ +GS+C +A+ Sbjct: 336 NNLAKNYGVIYLGFGIGSICGSIIAS 361
>Q6CGU8:MCH1_YARLI Probable transporter MCH1 - Yarrowia lipolytica (Candida lipolytica)| Length = 486 Score = 36.2 bits (82), Expect = 0.49 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 14/186 (7%) Frame = +1 Query: 1027 WMYFFSYMFSGTLGLVFLNNLGQIAESRGL--GDPSTXXXXXXXXXXXXXXXPAFLDYYT 1200 W++ ++F G +F NN+G I ++ + D + + + + Sbjct: 275 WLFLLCFVFIGGPFEMFQNNMGAILDTVTVENADSPSFSTHVSLFATFSTVSRLVVGFSS 334 Query: 1201 AKSGYSISRTASMASLMAPMAGAFFLLLDPRDMLLYAS-------TAVIGTCTGAITSVA 1359 +SR + S++A +A L++ ++ + T V G G+ ++ Sbjct: 335 EAMESHVSRPV-LLSVIALVAACIHLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLV 393 Query: 1360 VSATSELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREAR---GSNS--CVGAACY 1524 + ++++G N G + + VGSL +G L A +Y + GS S C G CY Sbjct: 394 PTIVTKVWGIANLGTIWGSFILALAVGSLGYGLLFAKVYDAASEVGVGSMSQVCSGVHCY 453 Query: 1525 RDTFLL 1542 TF++ Sbjct: 454 GLTFVI 459
>Q752I1:MCH1_ASHGO Probable transporter MCH1 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 450 Score = 35.0 bits (79), Expect = 1.1 Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 5/173 (2%) Frame = +1 Query: 1033 YFFSYMFSGTLGLV--FLNNLGQIAESRGLGDPSTXXXXXXXXXXXXXXXPAFLDYYTAK 1206 YF + + +LG + FL N+G ++ LG S +D Sbjct: 258 YFMALVLLLSLGPMEMFLTNMGSLSSL--LGQASVLPEFAIASTCSRFLSGLIIDL-CIH 314 Query: 1207 SGYSISRTASMASLMAPMAGAFFLLLDPRDM---LLYASTAVIGTCTGAITSVAVSATSE 1377 +G S + + A L+ + G + ++L R LL ++A+ G C G + +V+ T Sbjct: 315 NGVS-TMSVQWAVLLLGVVGQWIVVLATRASDGPLLSLASALSGACYGGLFTVSPILTLA 373 Query: 1378 LFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSNSCVGAACYRDTF 1536 ++G FG + + VGS+ FG A ++ +A + S V C + F Sbjct: 374 VWGDAVFGTAYGSFMITPAVGSILFGLTYAHIF--DANCTPSGVLPVCIQHVF 424
>Q9P3K8:MCH1_NEUCR Probable transporter MCH1 - Neurospora crassa| Length = 598 Score = 34.3 bits (77), Expect = 1.9 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Frame = +1 Query: 1306 YASTAVIGTCTGAITSVAVSATSELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQR- 1482 + ++ ++G GA+ S+ + ++G +NF N ++ +G+ +G + + +YQ Sbjct: 481 WVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQSG 540 Query: 1483 -EARGSNS--------CVGAACYRDTF 1536 E SN C G+ CY F Sbjct: 541 VEKAASNGQGGEEDQFCYGSECYASAF 567
>O55000:PP1RA_RAT Serine/threonine-protein phosphatase 1 regulatory subunit 10 -| Rattus norvegicus (Rat) Length = 872 Score = 33.9 bits (76), Expect = 2.4 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Frame = +3 Query: 513 HGRGAPGSSPLLAGQGVPAPQCRRAHARHP-PGGSVAPGGEARDRQEDRLGVLRHVHHHP 689 +GRG PG ++ G G H H PGGS+ G + + +G H P Sbjct: 735 NGRGGPGGGGMVGGGG---------HRPHEGPGGSMGSGHRSHEGPGGSMGSGHRSHEGP 785 Query: 690 GHRSMRRGGQHRLQVPRGLVQRAHD 764 GH GG H + R HD Sbjct: 786 GH-----GGPHGHRPHDVPSHRGHD 805
>Q8P3H9:TATB_XANCP Sec-independent protein translocase protein tatB homolog -| Xanthomonas campestris pv. campestris Length = 195 Score = 33.1 bits (74), Expect = 4.1 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = -1 Query: 740 PRDLEPMLPTTAHAPVTRVMVNMAKNPKSVLLPVP-GFTTRSDGTTRRVTSMGTTALRS 567 P +P P A APV MA PK L+P P G T + TT T+ T + S Sbjct: 131 PGSAQPHTPVPAPAPVVAQAQPMAPAPKQTLVPAPHGSLTSTQVTTHAPTASATASSTS 189
>Q80W00:PP1RA_MOUSE Serine/threonine-protein phosphatase 1 regulatory subunit 10 - Mus| musculus (Mouse) Length = 888 Score = 32.7 bits (73), Expect = 5.4 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = +3 Query: 513 HGRGAPGSSPLLAGQGVPAPQCRRAHARHP-PGGSVAPGGEARDRQEDRLGVLRHVHHHP 689 +GRG PG ++ G G H H PGGS+ G + D +G H P Sbjct: 735 NGRGGPGGGGMVGGGG---------HRPHEGPGGSMGSGHRSHDGPGGNMGSGHRSHDGP 785 Query: 690 GHRSMRRGGQHR 725 G +M G HR Sbjct: 786 G-GNMGGSGGHR 796
>Q9GLG4:SCG1_PIG Secretogranin-1 precursor - Sus scrofa (Pig)| Length = 668 Score = 32.3 bits (72), Expect = 7.0 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Frame = +3 Query: 507 HHHGRGAPGSSPLLAGQGVPAPQCRRAHARHPPGGSV----APGGEARDRQEDRLGVLRH 674 HHHGR P +P +G P P+ R H R SV +PGG+ RH Sbjct: 278 HHHGRSRPDRAP---QEGSPPPE-ERGHPREESEESVLGLASPGGQR----------TRH 323 Query: 675 VHHHPGHRSMRRGGQH-----RLQVPRGLV 749 H+P G+ +Q P LV Sbjct: 324 PTHYPASEEEAEHGEEVRSSSSVQAPGDLV 353
>Q82K53:IF2_STRAW Translation initiation factor IF-2 - Streptomyces avermitilis| Length = 1046 Score = 32.3 bits (72), Expect = 7.0 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 11/82 (13%) Frame = +3 Query: 528 PGSSPLLAG--QGVPAPQCRRAHARHPPGGSVAPGG---------EARDRQEDRLGVLRH 674 PG++P +G G+ PQ R PGG+ APGG + R + G Sbjct: 214 PGNNPFTSGGSTGMARPQAPRPGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPGGAPR 273 Query: 675 VHHHPGHRSMRRGGQHRLQVPR 740 PG GG R Q PR Sbjct: 274 PQGGPGGARPTPGGMPRPQAPR 295
>P76249:YEAS_ECOLI Uncharacterized membrane protein yeaS - Escherichia coli| Length = 212 Score = 32.0 bits (71), Expect = 9.2 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = +1 Query: 73 HWLSLVGSVWLQTINGPNSDFPVYSSRLKEVKGISQVQLNFLA----FASDAGKLFGWFA 240 +W LVG++++ + GPN+ F + +S +KG +LA F DA +F +A Sbjct: 10 YWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKG------GYLAACGVFIGDAVLMFLAWA 63 Query: 241 GVAAL 255 GVA L Sbjct: 64 GVATL 68
>A1Z6W3:PRIC1_DROME Protein prickle - Drosophila melanogaster (Fruit fly)| Length = 1299 Score = 32.0 bits (71), Expect = 9.2 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 522 GAPGSSPLLAGQGVPAPQCRRAHARHPPGGSVAPGGEA-RDRQEDRLGVLRHVHHHPGHR 698 G P + +G+P R+ + G + GGE RDR +D+ G RH H H R Sbjct: 1102 GEPAKKKGVRFEGIP-DTLPRSRSYSGNGAGTSGGGERERDRDKDKEGGGRHGHGHSSRR 1160 Query: 699 SMRR 710 RR Sbjct: 1161 RRRR 1164
>Q9BXJ2:C1QT7_HUMAN Complement C1q tumor necrosis factor-related protein 7 precursor -| Homo sapiens (Human) Length = 289 Score = 32.0 bits (71), Expect = 9.2 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Frame = -3 Query: 816 PQRHRDQDREGEHHVKADHVLSGR-GPEGLGAYAAHHGACSGDQGDGEHGEEPQVGPLAG 640 P R R+GE K L G+ GP GL G G GE+ +VGP+ Sbjct: 61 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120 Query: 639 PG 634 PG Sbjct: 121 PG 122 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 214,951,257 Number of extensions: 3896550 Number of successful extensions: 13532 Number of sequences better than 10.0: 15 Number of HSP's gapped: 13491 Number of HSP's successfully gapped: 15 Length of query: 626 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 507 Effective length of database: 68,045,334 Effective search space: 34498984338 Effective search space used: 34498984338 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)