ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf130n23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5AXV1:MCH1_EMENI Probable transporter mch1 - Emericella nidulan... 42 0.012
2Q4IM48:MCH1_GIBZE Probable transporter MCH1 - Gibberella zeae (F... 39 0.098
3Q4WVT3:MCH1_ASPFU Probable transporter mch1 - Aspergillus fumiga... 39 0.098
4P37662:YHJX_ECOLI Inner membrane protein yhjX - Escherichia coli 36 0.49
5Q6CGU8:MCH1_YARLI Probable transporter MCH1 - Yarrowia lipolytic... 36 0.49
6Q752I1:MCH1_ASHGO Probable transporter MCH1 - Ashbya gossypii (Y... 35 1.1
7Q9P3K8:MCH1_NEUCR Probable transporter MCH1 - Neurospora crassa 34 1.9
8O55000:PP1RA_RAT Serine/threonine-protein phosphatase 1 regulato... 34 2.4
9Q8P3H9:TATB_XANCP Sec-independent protein translocase protein ta... 33 4.1
10Q80W00:PP1RA_MOUSE Serine/threonine-protein phosphatase 1 regula... 33 5.4
11Q9GLG4:SCG1_PIG Secretogranin-1 precursor - Sus scrofa (Pig) 32 7.0
12Q82K53:IF2_STRAW Translation initiation factor IF-2 - Streptomyc... 32 7.0
13P76249:YEAS_ECOLI Uncharacterized membrane protein yeaS - Escher... 32 9.2
14A1Z6W3:PRIC1_DROME Protein prickle - Drosophila melanogaster (Fr... 32 9.2
15Q9BXJ2:C1QT7_HUMAN Complement C1q tumor necrosis factor-related ... 32 9.2

>Q5AXV1:MCH1_EMENI Probable transporter mch1 - Emericella nidulans (Aspergillus|
            nidulans)
          Length = 615
 Score = 41.6 bits (96), Expect = 0.012
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
 Frame = +1

Query: 1216 SISRTASMASLMAPMAGAFFLLLDP----RDMLLYASTAVIGTCTGAITSVAVSATSELF 1383
            ++SR A +      ++  F LL  P       L + +TA++G   G+I S+     S ++
Sbjct: 473  ALSRLAFLIPSALLLSLGFLLLASPLPTHHPELSHLTTALVGLGYGSIFSLVPIIISVVW 532

Query: 1384 GTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGS----NSCVGAACY 1524
            G +NFG N  ++      G+  +G + +  YQ  A GS      C G  C+
Sbjct: 533  GVENFGTNWGIVAMFPAAGAAMWGVIYSRAYQSAADGSPTDDGQCHGWKCF 583



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>Q4IM48:MCH1_GIBZE Probable transporter MCH1 - Gibberella zeae (Fusarium graminearum)|
          Length = 572

 Score = 38.5 bits (88), Expect = 0.098
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
 Frame = +1

Query: 1207 SGYSISRTASMASLMAPMAGAFFLL----LDPRDMLLYASTAVIGTCTGAITSVAVSATS 1374
            S +SISR A MA   + ++    +L    +       +  + ++G   GAI S+     +
Sbjct: 417  SRFSISRVAFMAFFASMLSIGLLILASGLVQNHAERFWLVSGLVGAGYGAIFSLTPLMVT 476

Query: 1375 ELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSNS-----------CVGAAC 1521
             ++G +NF  N+ ++      GS  +G + +  YQ  A  S +           C G  C
Sbjct: 477  IIWGVENFATNYGLIGMLPAAGSTFWGLVYSATYQNGANKSKAGPEGSDRDDLFCYGEQC 536

Query: 1522 YRDTF 1536
            Y  T+
Sbjct: 537  YAPTY 541



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>Q4WVT3:MCH1_ASPFU Probable transporter mch1 - Aspergillus fumigatus (Sartorya fumigata)|
          Length = 619

 Score = 38.5 bits (88), Expect = 0.098
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
 Frame = +1

Query: 1216 SISRTASMASLMAPMAGAFFLLLDPRDM----LLYASTAVIGTCTGAITSVAVSATSELF 1383
            ++SR A +      ++  + LL  P  +    L + +TA+IG   G+  S+     S ++
Sbjct: 476  TLSRLAFLLPSALLLSLGYLLLSSPLPLQHPGLSHVTTALIGLGYGSAFSLVPIIISVVW 535

Query: 1384 GTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSN-----SCVGAACY 1524
            G +NFG N  ++      G+  +G + +  YQ    G N      C G  CY
Sbjct: 536  GVENFGTNWGIVAMVPAAGAAMWGVIYSRGYQDATDGGNGSPDGQCHGWRCY 587



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>P37662:YHJX_ECOLI Inner membrane protein yhjX - Escherichia coli|
          Length = 402

 Score = 36.2 bits (82), Expect = 0.49
 Identities = 24/86 (27%), Positives = 35/86 (40%)
 Frame = +1

Query: 1210 GYSISRTASMASLMAPMAGAFFLLLDPRDMLLYASTAVIGTCTGAITSVAVSATSELFGT 1389
            G  IS     A L AP+    F          +A+ A +    G   +V  S  SE FG 
Sbjct: 286  GQVISLVGMAALLFAPLNAVTF----------FAAIACVAFNFGGTITVFPSLVSEFFGL 335

Query: 1390 KNFGVNHNVLVANIPVGSLCFGYLAA 1467
             N   N+ V+     +GS+C   +A+
Sbjct: 336  NNLAKNYGVIYLGFGIGSICGSIIAS 361



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>Q6CGU8:MCH1_YARLI Probable transporter MCH1 - Yarrowia lipolytica (Candida lipolytica)|
          Length = 486

 Score = 36.2 bits (82), Expect = 0.49
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 14/186 (7%)
 Frame = +1

Query: 1027 WMYFFSYMFSGTLGLVFLNNLGQIAESRGL--GDPSTXXXXXXXXXXXXXXXPAFLDYYT 1200
            W++   ++F G    +F NN+G I ++  +   D  +                  + + +
Sbjct: 275  WLFLLCFVFIGGPFEMFQNNMGAILDTVTVENADSPSFSTHVSLFATFSTVSRLVVGFSS 334

Query: 1201 AKSGYSISRTASMASLMAPMAGAFFLLLDPRDMLLYAS-------TAVIGTCTGAITSVA 1359
                  +SR   + S++A +A    L++      ++ +       T V G   G+  ++ 
Sbjct: 335  EAMESHVSRPV-LLSVIALVAACIHLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLV 393

Query: 1360 VSATSELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREAR---GSNS--CVGAACY 1524
             +  ++++G  N G      +  + VGSL +G L A +Y   +    GS S  C G  CY
Sbjct: 394  PTIVTKVWGIANLGTIWGSFILALAVGSLGYGLLFAKVYDAASEVGVGSMSQVCSGVHCY 453

Query: 1525 RDTFLL 1542
              TF++
Sbjct: 454  GLTFVI 459



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>Q752I1:MCH1_ASHGO Probable transporter MCH1 - Ashbya gossypii (Yeast) (Eremothecium|
            gossypii)
          Length = 450

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
 Frame = +1

Query: 1033 YFFSYMFSGTLGLV--FLNNLGQIAESRGLGDPSTXXXXXXXXXXXXXXXPAFLDYYTAK 1206
            YF + +   +LG +  FL N+G ++    LG  S                   +D     
Sbjct: 258  YFMALVLLLSLGPMEMFLTNMGSLSSL--LGQASVLPEFAIASTCSRFLSGLIIDL-CIH 314

Query: 1207 SGYSISRTASMASLMAPMAGAFFLLLDPRDM---LLYASTAVIGTCTGAITSVAVSATSE 1377
            +G S + +   A L+  + G + ++L  R     LL  ++A+ G C G + +V+   T  
Sbjct: 315  NGVS-TMSVQWAVLLLGVVGQWIVVLATRASDGPLLSLASALSGACYGGLFTVSPILTLA 373

Query: 1378 LFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQREARGSNSCVGAACYRDTF 1536
            ++G   FG  +   +    VGS+ FG   A ++  +A  + S V   C +  F
Sbjct: 374  VWGDAVFGTAYGSFMITPAVGSILFGLTYAHIF--DANCTPSGVLPVCIQHVF 424



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>Q9P3K8:MCH1_NEUCR Probable transporter MCH1 - Neurospora crassa|
          Length = 598

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
 Frame = +1

Query: 1306 YASTAVIGTCTGAITSVAVSATSELFGTKNFGVNHNVLVANIPVGSLCFGYLAAFLYQR- 1482
            + ++ ++G   GA+ S+     + ++G +NF  N  ++     +G+  +G + + +YQ  
Sbjct: 481  WVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQSG 540

Query: 1483 -EARGSNS--------CVGAACYRDTF 1536
             E   SN         C G+ CY   F
Sbjct: 541  VEKAASNGQGGEEDQFCYGSECYASAF 567



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>O55000:PP1RA_RAT Serine/threonine-protein phosphatase 1 regulatory subunit 10 -|
           Rattus norvegicus (Rat)
          Length = 872

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
 Frame = +3

Query: 513 HGRGAPGSSPLLAGQGVPAPQCRRAHARHP-PGGSVAPGGEARDRQEDRLGVLRHVHHHP 689
           +GRG PG   ++ G G         H  H  PGGS+  G  + +     +G     H  P
Sbjct: 735 NGRGGPGGGGMVGGGG---------HRPHEGPGGSMGSGHRSHEGPGGSMGSGHRSHEGP 785

Query: 690 GHRSMRRGGQHRLQVPRGLVQRAHD 764
           GH     GG H  +       R HD
Sbjct: 786 GH-----GGPHGHRPHDVPSHRGHD 805



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>Q8P3H9:TATB_XANCP Sec-independent protein translocase protein tatB homolog -|
           Xanthomonas campestris pv. campestris
          Length = 195

 Score = 33.1 bits (74), Expect = 4.1
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -1

Query: 740 PRDLEPMLPTTAHAPVTRVMVNMAKNPKSVLLPVP-GFTTRSDGTTRRVTSMGTTALRS 567
           P   +P  P  A APV      MA  PK  L+P P G  T +  TT   T+  T +  S
Sbjct: 131 PGSAQPHTPVPAPAPVVAQAQPMAPAPKQTLVPAPHGSLTSTQVTTHAPTASATASSTS 189



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>Q80W00:PP1RA_MOUSE Serine/threonine-protein phosphatase 1 regulatory subunit 10 - Mus|
           musculus (Mouse)
          Length = 888

 Score = 32.7 bits (73), Expect = 5.4
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +3

Query: 513 HGRGAPGSSPLLAGQGVPAPQCRRAHARHP-PGGSVAPGGEARDRQEDRLGVLRHVHHHP 689
           +GRG PG   ++ G G         H  H  PGGS+  G  + D     +G     H  P
Sbjct: 735 NGRGGPGGGGMVGGGG---------HRPHEGPGGSMGSGHRSHDGPGGNMGSGHRSHDGP 785

Query: 690 GHRSMRRGGQHR 725
           G  +M   G HR
Sbjct: 786 G-GNMGGSGGHR 796



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>Q9GLG4:SCG1_PIG Secretogranin-1 precursor - Sus scrofa (Pig)|
          Length = 668

 Score = 32.3 bits (72), Expect = 7.0
 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
 Frame = +3

Query: 507 HHHGRGAPGSSPLLAGQGVPAPQCRRAHARHPPGGSV----APGGEARDRQEDRLGVLRH 674
           HHHGR  P  +P    +G P P+  R H R     SV    +PGG+            RH
Sbjct: 278 HHHGRSRPDRAP---QEGSPPPE-ERGHPREESEESVLGLASPGGQR----------TRH 323

Query: 675 VHHHPGHRSMRRGGQH-----RLQVPRGLV 749
             H+P        G+       +Q P  LV
Sbjct: 324 PTHYPASEEEAEHGEEVRSSSSVQAPGDLV 353



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>Q82K53:IF2_STRAW Translation initiation factor IF-2 - Streptomyces avermitilis|
          Length = 1046

 Score = 32.3 bits (72), Expect = 7.0
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
 Frame = +3

Query: 528 PGSSPLLAG--QGVPAPQCRRAHARHPPGGSVAPGG---------EARDRQEDRLGVLRH 674
           PG++P  +G   G+  PQ  R      PGG+ APGG         +   R +   G    
Sbjct: 214 PGNNPFTSGGSTGMARPQAPRPGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPGGAPR 273

Query: 675 VHHHPGHRSMRRGGQHRLQVPR 740
               PG      GG  R Q PR
Sbjct: 274 PQGGPGGARPTPGGMPRPQAPR 295



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>P76249:YEAS_ECOLI Uncharacterized membrane protein yeaS - Escherichia coli|
          Length = 212

 Score = 32.0 bits (71), Expect = 9.2
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +1

Query: 73  HWLSLVGSVWLQTINGPNSDFPVYSSRLKEVKGISQVQLNFLA----FASDAGKLFGWFA 240
           +W  LVG++++  + GPN+ F + +S    +KG       +LA    F  DA  +F  +A
Sbjct: 10  YWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKG------GYLAACGVFIGDAVLMFLAWA 63

Query: 241 GVAAL 255
           GVA L
Sbjct: 64  GVATL 68



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>A1Z6W3:PRIC1_DROME Protein prickle - Drosophila melanogaster (Fruit fly)|
          Length = 1299

 Score = 32.0 bits (71), Expect = 9.2
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 522  GAPGSSPLLAGQGVPAPQCRRAHARHPPGGSVAPGGEA-RDRQEDRLGVLRHVHHHPGHR 698
            G P     +  +G+P     R+ +    G   + GGE  RDR +D+ G  RH H H   R
Sbjct: 1102 GEPAKKKGVRFEGIP-DTLPRSRSYSGNGAGTSGGGERERDRDKDKEGGGRHGHGHSSRR 1160

Query: 699  SMRR 710
              RR
Sbjct: 1161 RRRR 1164



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>Q9BXJ2:C1QT7_HUMAN Complement C1q tumor necrosis factor-related protein 7 precursor -|
           Homo sapiens (Human)
          Length = 289

 Score = 32.0 bits (71), Expect = 9.2
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -3

Query: 816 PQRHRDQDREGEHHVKADHVLSGR-GPEGLGAYAAHHGACSGDQGDGEHGEEPQVGPLAG 640
           P R     R+GE   K    L G+ GP GL       G        G  GE+ +VGP+  
Sbjct: 61  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120

Query: 639 PG 634
           PG
Sbjct: 121 PG 122


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 214,951,257
Number of extensions: 3896550
Number of successful extensions: 13532
Number of sequences better than 10.0: 15
Number of HSP's gapped: 13491
Number of HSP's successfully gapped: 15
Length of query: 626
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 507
Effective length of database: 68,045,334
Effective search space: 34498984338
Effective search space used: 34498984338
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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