ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf130n16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 Score = 1179 bits (595), Expect = 0.0 Identities = 667/691 (96%) Strand = Plus / Plus Query: 80 tatccagtgcgagagccggtagcagcccgaggactctcccatggcggccatatcgtcgct 139 ||||| ||| ||||||||| | |||||||||| |||||||||||||||||||||||||| Sbjct: 1 tatcccgtgagagagccggcggtagcccgaggagtctcccatggcggccatatcgtcgct 60 Query: 140 tccgttcgctgcactgcgccgagcggccgactggaggccgtcgacggcgactgccgcggt 199 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 61 tcctttcgctgcactgcgccgagcggccgactggaggccgtcaacggcgactgccgcggt 120 Query: 200 gagcgtctccggtggcgtcatgctcaacgcgagggctcggcggggctcacgttcggtggt 259 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 121 gagcgtctccggtggcgtcatgctcaacgcgagggctcggcggggatcacgttcggtggt 180 Query: 260 gcgctgcgtcatcactgccggtgatattccacctactgtggcagatacaaagatgaactt 319 |||||||||| || || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 181 gcgctgcgtcgctacggctggtgatatcccacctactgtggcagatacaaagatgaactt 240 Query: 320 cctgaagtcgtacaaacgtcctattccaagcatgtacagtacagttctacaagaactttt 379 ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 241 cctgaagtcatacaaacgtcctattccaagcatttacagtacagtcctacaagaactttt 300 Query: 380 ggtgcagcaacatctgatgagatacaaaagtacgtatcagtatgatcctgtgtttgctct 439 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 ggtgcagcaacatctgatgagatacaaaagtacctatcagtatgatcctgtgtttgctct 360 Query: 440 tggatttgtcaccgtctatgaccagcttatggaagggtaccccagcaacgaggacaggga 499 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 361 tggatttgtcaccgtctatgaccagcttatggaagggtaccccagcaccgaggacaggga 420 Query: 500 tgccatcttcaagtcatatgtaacggcgttaaatgaagatcctgagcaatacagggctga 559 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tgccatcttcaagtcatacgtaacggcgttaaatgaagatcctgagcaatacagggctga 480 Query: 560 tgcacaaaggatggaagagtgggcacgctcacaaaatggtaatctgttagttgaattttc 619 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 481 tgcacaaaggatggaagagtgggcacgctcacaaaatggtaacttgttagttgaattttc 540 Query: 620 ttccagagatggggaaatagagtccattctgaaagatatatcagaaagggcccaggataa 679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 541 ttccagagatggggaaatagagtccattctgaaagatatatcagaaagggcccagggtaa 600 Query: 680 gggaaacttcagctacagccggttctttgctgttggcttgttccgtttgcttgagctctc 739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 gggaaacttcagctacagccggttctttgctgttggcttgttccgtttgcttgagctctc 660 Query: 740 aaatgcgacggagccaaccgtactggacaag 770 ||||||||||||||||||||||||||||||| Sbjct: 661 aaatgcgacggagccaaccgtactggacaag 691 Score = 323 bits (163), Expect = 2e-84 Identities = 204/220 (92%) Strand = Plus / Plus Query: 2158 agctttgcgctgctctaaacatcaatnnnnnnngcgtggatagagaccttgacgtttacc 2217 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 690 agctttgtgctgctctaaacatcaataaaaagagcgtggatagagaccttgacgtttacc 749 Query: 2218 gcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtcgagaggg 2277 |||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct: 750 gcaacttactctcgaaattggttcaagccaaggaacttctcaaggaatacatcaagaggg 809 Query: 2278 aaaagaagaagagagcagagagattggagacgcccaagccgaacgaggctgttgcaaaat 2337 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 810 aaaagaagaagagagaggagagattggagacgcccaagccgaatgaggctgttgcaaaat 869 Query: 2338 tcgatggaagcacttatcccttgaagcattaactcaacct 2377 ||||||||||| |||||||||||||||||||||||||||| Sbjct: 870 tcgatggaagcgcttatcccttgaagcattaactcaacct 909
>gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1 (TaThf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1130 Score = 1152 bits (581), Expect = 0.0 Identities = 638/657 (97%) Strand = Plus / Plus Query: 114 tctcccatggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactgg 173 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 tctcccatggcggccatatcgtcgcttcctttcgctgcactgcgccgagcggccgactgg 60 Query: 174 aggccgtcgacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 233 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggccgtcaacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 120 Query: 234 gctcggcggggctcacgttcggtggtgcgctgcgtcatcactgccggtgatattccacct 293 ||||||||||| |||||||||||||||||||||||| || || |||||||| |||||| Sbjct: 121 gctcggcggggatcacgttcggtggtgcgctgcgtcgctacggctggtgatatcccacct 180 Query: 294 actgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattccaagcatg 353 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 181 actgtggcagatacaaagatgaacttcctgaagtcatacaaacgtcctattccaagcatt 240 Query: 354 tacagtacagttctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacg 413 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tacagtacagtcctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacc 300 Query: 414 tatcagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaa 473 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 301 tatcagtatgatcctgtgtttgctcttggatttgtcactgtctatgaccagcttatggaa 360 Query: 474 gggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaat 533 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 361 gggtaccccagcaccgaggacagggatgccatcttcaagtcatacgtaacggcgttaaat 420 Query: 534 gaagatcctgagcaatacagggctgatgcacaaaggatggaagagtgggcacgctcacaa 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gaagatcctgagcaatacagggctgatgcacaaaggatggaagagtgggcacgctcacaa 480 Query: 594 aatggtaatctgttagttgaattttcttccagagatggggaaatagagtccattctgaaa 653 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aatggtaacttgttagttgaattttcttccagagatggggaaatagagtccattctgaaa 540 Query: 654 gatatatcagaaagggcccaggataagggaaacttcagctacagccggttctttgctgtt 713 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 541 gatatatcagaaagggcccagggtaagggaaacttcagctacagccggttctttgctgtt 600 Query: 714 ggcttgttccgtttgcttgagctctcaaatgcgacggagccaaccgtactggacaag 770 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ggcttgttccgtttgcttgagctctcaaatgcgacggagccaaccgtactggacaag 657 Score = 603 bits (304), Expect = e-168 Identities = 409/444 (92%), Gaps = 8/444 (1%) Strand = Plus / Plus Query: 2158 agctttgcgctgctctaaacatcaatnnnnnnngcgtggatagagaccttgacgtttacc 2217 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 656 agctttgtgctgctctaaacatcaataaaaagagcgtggatagagaccttgacgtttacc 715 Query: 2218 gcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtcgagaggg 2277 |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 716 gcaacttactctcgaaattggttcaagccaaggaacttctcaaggaatacatcgagaggg 775 Query: 2278 aaaagaagaagagagcagagagattggagacgcccaagccgaacgaggctgttgcaaaat 2337 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 776 aaaagaagaagagagaggagagattggagacgcccaagccgaatgaggctgttgcaaaat 835 Query: 2338 tcgatggaagcacttatcccttgaagcattaactcaacctttccccagaggagagcttgt 2397 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 836 tcgatggaagcgcttatcccttgaagcattaactcaacctttccccagaggacagcttgt 895 Query: 2398 ccggataacagatattaacagttat--acatctggatagcgttgagaactatcgggggca 2455 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 896 ccggataacagatattaacagttatacacatctggatagcgttgagaactatcgggggca 955 Query: 2456 tctttggctgctcttagcgtg-gtgtagtactcggcggtacaaaaagatccagattattc 2514 ||||||||||||||| ||| | ||||||||||| || ||||||||||||||||||||||| Sbjct: 956 tctttggctgctcttcgcgcgagtgtagtactccgccgtacaaaaagatccagattattc 1015 Query: 2515 gcagta-----gttggtattttgtaatttctccttctctgtgttcgaatgtaccgttttc 2569 | |||| ||||||||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1016 gtagtattgagtttggtattttgtaatttctccttgtctgtgttcgaatggatcgttttc 1075 Query: 2570 ttcacttcgttgacaatatatgaa 2593 ||||||| ||||||||||||||| Sbjct: 1076 ttcacttatttgacaatatatgaa 1099
>gb|DQ235271.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1 (TaThf1) gene, complete cds; nuclear gene for chloroplast product Length = 867 Score = 1136 bits (573), Expect = 0.0 Identities = 636/657 (96%) Strand = Plus / Plus Query: 114 tctcccatggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactgg 173 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 tctcccatggcggccatatcgtcgcttcctttcgctgcactgcgccgagcggccgactgg 60 Query: 174 aggccgtcgacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 233 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggccgtcaacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 120 Query: 234 gctcggcggggctcacgttcggtggtgcgctgcgtcatcactgccggtgatattccacct 293 ||||||||||| |||||||||||||||||||||||| || || |||||||| |||||| Sbjct: 121 gctcggcggggatcacgttcggtggtgcgctgcgtcgctacggctggtgatatcccacct 180 Query: 294 actgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattccaagcatg 353 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 181 actgtggcagatacaaagatgaacttcctgaagtcatacaaacgccctattccaagcatt 240 Query: 354 tacagtacagttctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacg 413 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tacagtacagtcctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacc 300 Query: 414 tatcagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaa 473 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 301 tatcagtatgatcctgtgtttgctcttggatttgtcactgtctatgaccagcttatggaa 360 Query: 474 gggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaat 533 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 361 gggtaccccagcaccgaggacagggatgccatcttcaagtcatacgtaacggcgttaaat 420 Query: 534 gaagatcctgagcaatacagggctgatgcacaaaggatggaagagtgggcacgctcacaa 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gaagatcctgagcaatacagggctgatgcacaaaggatggaagagtgggcacgctcacaa 480 Query: 594 aatggtaatctgttagttgaattttcttccagagatggggaaatagagtccattctgaaa 653 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aatggtaacttgttagttgaattttcttccagagatggggaaatagagtccattctgaaa 540 Query: 654 gatatatcagaaagggcccaggataagggaaacttcagctacagccggttctttgctgtt 713 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 541 gatatatcagaaagggcccagggtaaggggaacttcagctacagccggttctttgctgtt 600 Query: 714 ggcttgttccgtttgcttgagctctcaaatgcgacggagccaaccgtactggacaag 770 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ggcttgttccgtttgcttgagctctcaaatgcgacggagccaaccgtactggacaag 657 Score = 315 bits (159), Expect = 4e-82 Identities = 197/212 (92%) Strand = Plus / Plus Query: 2158 agctttgcgctgctctaaacatcaatnnnnnnngcgtggatagagaccttgacgtttacc 2217 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 656 agctttgtgctgctctaaacatcaataaaaagagcgtggatagagaccttgacgtttacc 715 Query: 2218 gcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtcgagaggg 2277 |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 716 gcaacttactctcgaaattggttcaagccaaggaacttctcaaggaatacatcgagaggg 775 Query: 2278 aaaagaagaagagagcagagagattggagacgcccaagccgaacgaggctgttgcaaaat 2337 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 776 aaaagaagaagagagaggagagattggagacgcccaagccgaatgaggctgttgcaaaat 835 Query: 2338 tcgatggaagcacttatcccttgaagcattaa 2369 ||||||||||| |||||||||||||||||||| Sbjct: 836 tcgatggaagcgcttatcccttgaagcattaa 867
>gb|AY104484.1| Zea mays PCO107854 mRNA sequence Length = 842 Score = 573 bits (289), Expect = e-159 Identities = 561/652 (86%), Gaps = 6/652 (0%) Strand = Plus / Plus Query: 119 catggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggcc 178 |||||||||||||||||| ||||| ||||| || |||||| |||| ||||| |||||||| Sbjct: 128 catggcggccatatcgtcacttcccttcgcggcgctgcgcggagccgccgagtggaggcc 187 Query: 179 gtcgacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagggctcg 238 |||| || || | || || ||||||||| | |||| |||||| ||||||| |||| Sbjct: 188 gtcgtcgacggcggcggc------cgtctccggcgccgtcgtgctcagcgcgaggtctcg 241 Query: 239 gcggggctcacgttcggtggtgcgctgcgtcatcactgccggtgatattccacctactgt 298 |||||||| || ||||||||||| || ||| ||| | |||||| | ||||| ||||| Sbjct: 242 ccggggctcgcgctcggtggtgcgatgtgtcgccacgacgggtgatgtcccacccactgt 301 Query: 299 ggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattccaagcatgtacag 358 ||||| ||||| |||||||||| ||||| |||||||| || || |||||||| ||||| Sbjct: 302 cgcagaaacaaaactgaacttccttaagtcatacaaacgcccaatcccaagcatttacag 361 Query: 359 tacagttctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacgtatca 418 | |||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| Sbjct: 362 tgcagtcttacaagaacttttggtgcagcaacacctgatgagatacaaaaaaacctatca 421 Query: 419 gtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagggta 478 ||||||| |||||||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 422 gtatgatgctgtgtttgctcttggcttcgtcactgtctatgatcagctcatggaagggta 481 Query: 479 ccccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaatgaaga 538 ||||||||| ||||||| |||| ||||||||||| ||||| |||| || ||||||||||| Sbjct: 482 ccccagcaatgaggacaaggattccatcttcaaggcatatataacagcattaaatgaaga 541 Query: 539 tcctgagcaatacagggctgatgcacaaaggatggaagagtgggcacgctcacaaaatgg 598 |||||| |||||||| |||||||||| || |||||||||||||||||| || || || || Sbjct: 542 tcctgatcaatacagagctgatgcactaaagatggaagagtgggcacgttcccagaacgg 601 Query: 599 taatctgttagttgaattttcttccagagatggggaaatagagtccattctgaaagatat 658 || | |||||||| ||||||||||||||||| ||||| ||| | |||||||||||||| Sbjct: 602 tagttccttagttgatttttcttccagagatggagaaatcgaggctattctgaaagatat 661 Query: 659 atcagaaagggcccaggataagggaaacttcagctacagccggttctttgctgttggctt 718 ||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 662 atcagaaagggccaagggtaagggaaacttcagctacagccgattctttgcagttggctt 721 Query: 719 gttccgtttgcttgagctctcaaatgcgacggagccaaccgtactggacaag 770 ||||||||||||||||||||||||||| ||||||||||| |||| |||||| Sbjct: 722 gttccgtttgcttgagctctcaaatgcaacggagccaacaatactagacaag 773 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 2193 gtggatagagaccttgacgtttaccgcaacttact 2227 |||||||| |||||||| |||||||||||| |||| Sbjct: 807 gtggatagggaccttgatgtttaccgcaacatact 841
>emb|CT833053.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083J14, full insert sequence Length = 1309 Score = 547 bits (276), Expect = e-152 Identities = 486/556 (87%) Strand = Plus / Plus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 274 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| ||| Sbjct: 235 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 294 Query: 275 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 334 || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 295 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 354 Query: 335 acgtcctattccaagcatgtacagtacagttctacaagaacttttggtgcagcaacatct 394 |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 355 gcgtcctatcccaagcatttacagtacagttctacaagaacttttggtacagcaacatct 414 Query: 395 gatgagatacaaaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgt 454 |||||||||||||| || ||||| |||||| | |||||||||||||| ||||| ||||| Sbjct: 415 gatgagatacaaaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgt 474 Query: 455 ctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtc 514 ||||||||| || |||||||||||||| ||||| ||||| |||||||| |||||||| | Sbjct: 475 ctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagc 534 Query: 515 atatgtaacggcgttaaatgaagatcctgagcaatacagggctgatgcacaaaggatgga 574 |||| |||| |||||||| ||||| |||||||||||||| ||||| ||||||| |||||| Sbjct: 535 atatataacagcgttaaacgaagaccctgagcaatacagagctgacgcacaaaagatgga 594 Query: 575 agagtgggcacgctcacaaaatggtaatctgttagttgaattttcttccagagatgggga 634 ||||||||| || || || ||||||||| |||||||| ||||| |||| |||||| || Sbjct: 595 agagtgggctcgttcccagaatggtaattctttagttgagttttcatccaaagatggaga 654 Query: 635 aatagagtccattctgaaagatatatcagaaagggcccaggataagggaaacttcagcta 694 ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 655 aatagaggccattctgaaagatatttcagaaagggcccagggtaagggaagcttcagcta 714 Query: 695 cagccggttctttgctgttggcttgttccgtttgcttgagctctcaaatgcgacggagcc 754 ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 715 cagccggttctttgcagttggcttgttccgtttgcttgagcttgcaaatgcaacagagcc 774 Query: 755 aaccgtactggacaag 770 |||| |||| |||||| Sbjct: 775 aaccatactagacaag 790 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 137 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 196 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 197 tcgacggcg 205 Score = 83.8 bits (42), Expect = 3e-12 Identities = 72/82 (87%) Strand = Plus / Plus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtc 2270 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 842 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgtg 901 Query: 2271 gagagggaaaagaagaagagag 2292 || ||||||||||||||||||| Sbjct: 902 gaaagggaaaagaagaagagag 923 Score = 44.1 bits (22), Expect = 2.5 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 2528 ttttgtaatttctccttctctgtgttcgaatgtaccgttttcttcacttcgttgacaata 2587 |||||||||| |||||| || |||||| |||||| ||||||| | ||| ||||||||| Sbjct: 1185 ttttgtaatt-ctccttttcagtgttcaaatgtatcgttttcctt--ttctttgacaata 1241 Query: 2588 tatgaagag 2596 ||||||||| Sbjct: 1242 tatgaagag 1250
>ref|NM_001066511.1| Oryza sativa (japonica cultivar-group) Os07g0558500 (Os07g0558500) mRNA, complete cds Length = 1151 Score = 539 bits (272), Expect = e-149 Identities = 485/556 (87%) Strand = Plus / Plus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 274 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| ||| Sbjct: 196 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 255 Query: 275 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 334 || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 256 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 315 Query: 335 acgtcctattccaagcatgtacagtacagttctacaagaacttttggtgcagcaacatct 394 |||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 375 Query: 395 gatgagatacaaaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgt 454 |||||||||||||| || ||||| |||||| | |||||||||||||| ||||| ||||| Sbjct: 376 gatgagatacaaaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgt 435 Query: 455 ctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtc 514 ||||||||| || |||||||||||||| ||||| ||||| |||||||| |||||||| | Sbjct: 436 ctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagc 495 Query: 515 atatgtaacggcgttaaatgaagatcctgagcaatacagggctgatgcacaaaggatgga 574 |||| |||| |||||||| ||||| |||||||||||||| ||||| ||||||| |||||| Sbjct: 496 atatataacagcgttaaacgaagaccctgagcaatacagagctgacgcacaaaagatgga 555 Query: 575 agagtgggcacgctcacaaaatggtaatctgttagttgaattttcttccagagatgggga 634 ||||||||| || || || ||||||||| |||||||| ||||| |||| |||||| || Sbjct: 556 agagtgggctcgttcccagaatggtaattctttagttgagttttcatccaaagatggaga 615 Query: 635 aatagagtccattctgaaagatatatcagaaagggcccaggataagggaaacttcagcta 694 ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 616 aatagaggccattctgaaagatatttcagaaagggcccagggtaagggaagcttcagcta 675 Query: 695 cagccggttctttgctgttggcttgttccgtttgcttgagctctcaaatgcgacggagcc 754 ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 676 cagccggttctttgcagttggcttgttccgtttgcttgagcttgcaaatgcaacagagcc 735 Query: 755 aaccgtactggacaag 770 |||| |||| |||||| Sbjct: 736 aaccatactagacaag 751 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 98 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 157 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 158 tcgacggcg 166 Score = 83.8 bits (42), Expect = 3e-12 Identities = 72/82 (87%) Strand = Plus / Plus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtc 2270 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 803 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgtg 862 Query: 2271 gagagggaaaagaagaagagag 2292 || ||||||||||||||||||| Sbjct: 863 gaaagggaaaagaagaagagag 884
>gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23045 inositol phosphatase-like protein mRNA, complete cds Length = 864 Score = 539 bits (272), Expect = e-149 Identities = 485/556 (87%) Strand = Plus / Plus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 274 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| ||| Sbjct: 99 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 158 Query: 275 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 334 || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 159 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 218 Query: 335 acgtcctattccaagcatgtacagtacagttctacaagaacttttggtgcagcaacatct 394 |||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 278 Query: 395 gatgagatacaaaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgt 454 |||||||||||||| || ||||| |||||| | |||||||||||||| ||||| ||||| Sbjct: 279 gatgagatacaaaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgt 338 Query: 455 ctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtc 514 ||||||||| || |||||||||||||| ||||| ||||| |||||||| |||||||| | Sbjct: 339 ctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagc 398 Query: 515 atatgtaacggcgttaaatgaagatcctgagcaatacagggctgatgcacaaaggatgga 574 |||| |||| |||||||| ||||| |||||||||||||| ||||| ||||||| |||||| Sbjct: 399 atatataacagcgttaaacgaagaccctgagcaatacagagctgacgcacaaaagatgga 458 Query: 575 agagtgggcacgctcacaaaatggtaatctgttagttgaattttcttccagagatgggga 634 ||||||||| || || || ||||||||| |||||||| ||||| |||| |||||| || Sbjct: 459 agagtgggctcgttcccagaatggtaattctttagttgagttttcatccaaagatggaga 518 Query: 635 aatagagtccattctgaaagatatatcagaaagggcccaggataagggaaacttcagcta 694 ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 519 aatagaggccattctgaaagatatttcagaaagggcccagggtaagggaagcttcagcta 578 Query: 695 cagccggttctttgctgttggcttgttccgtttgcttgagctctcaaatgcgacggagcc 754 ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 579 cagccggttctttgcagttggcttgttccgtttgcttgagcttgcaaatgcaacagagcc 638 Query: 755 aaccgtactggacaag 770 |||| |||| |||||| Sbjct: 639 aaccatactagacaag 654 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 1 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 60 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 61 tcgacggcg 69 Score = 83.8 bits (42), Expect = 3e-12 Identities = 72/82 (87%) Strand = Plus / Plus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtc 2270 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 706 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgtg 765 Query: 2271 gagagggaaaagaagaagagag 2292 || ||||||||||||||||||| Sbjct: 766 gaaagggaaaagaagaagagag 787
>dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M13, full insert sequence Length = 1152 Score = 539 bits (272), Expect = e-149 Identities = 485/556 (87%) Strand = Plus / Plus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 274 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| ||| Sbjct: 197 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 256 Query: 275 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 334 || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 257 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 316 Query: 335 acgtcctattccaagcatgtacagtacagttctacaagaacttttggtgcagcaacatct 394 |||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 317 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 376 Query: 395 gatgagatacaaaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgt 454 |||||||||||||| || ||||| |||||| | |||||||||||||| ||||| ||||| Sbjct: 377 gatgagatacaaaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgt 436 Query: 455 ctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtc 514 ||||||||| || |||||||||||||| ||||| ||||| |||||||| |||||||| | Sbjct: 437 ctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagc 496 Query: 515 atatgtaacggcgttaaatgaagatcctgagcaatacagggctgatgcacaaaggatgga 574 |||| |||| |||||||| ||||| |||||||||||||| ||||| ||||||| |||||| Sbjct: 497 atatataacagcgttaaacgaagaccctgagcaatacagagctgacgcacaaaagatgga 556 Query: 575 agagtgggcacgctcacaaaatggtaatctgttagttgaattttcttccagagatgggga 634 ||||||||| || || || ||||||||| |||||||| ||||| |||| |||||| || Sbjct: 557 agagtgggctcgttcccagaatggtaattctttagttgagttttcatccaaagatggaga 616 Query: 635 aatagagtccattctgaaagatatatcagaaagggcccaggataagggaaacttcagcta 694 ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 617 aatagaggccattctgaaagatatttcagaaagggcccagggtaagggaagcttcagcta 676 Query: 695 cagccggttctttgctgttggcttgttccgtttgcttgagctctcaaatgcgacggagcc 754 ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 677 cagccggttctttgcagttggcttgttccgtttgcttgagcttgcaaatgcaacagagcc 736 Query: 755 aaccgtactggacaag 770 |||| |||| |||||| Sbjct: 737 aaccatactagacaag 752 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 99 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 158 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 159 tcgacggcg 167 Score = 83.8 bits (42), Expect = 3e-12 Identities = 72/82 (87%) Strand = Plus / Plus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtc 2270 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 804 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgtg 863 Query: 2271 gagagggaaaagaagaagagag 2292 || ||||||||||||||||||| Sbjct: 864 gaaagggaaaagaagaagagag 885
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 280 bits (141), Expect = 2e-71 Identities = 237/269 (88%) Strand = Plus / Minus Query: 286 ttccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattc 345 ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| |||||||| | Sbjct: 22268329 ttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaagcgtcctatcc 22268270 Query: 346 caagcatgtacagtacagttctacaagaacttttggtgcagcaacatctgatgagataca 405 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 22268269 taagcatttacagtacagttctacaagaacttttggtacagcaacatctgatgagataca 22268210 Query: 406 aaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagc 465 ||| || ||||| |||||| | |||||||||||||| ||||| |||||||||||||| | Sbjct: 22268209 aaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgtctatgaccaac 22268150 Query: 466 ttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacgg 525 | |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| | Sbjct: 22268149 tcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagcatatataacag 22268090 Query: 526 cgttaaatgaagatcctgagcaatacagg 554 ||||||| ||||| ||||||||||||||| Sbjct: 22268089 cgttaaacgaagaccctgagcaatacagg 22268061 Score = 266 bits (134), Expect = 4e-67 Identities = 209/234 (89%) Strand = Plus / Minus Query: 555 gctgatgcacaaaggatggaagagtgggcacgctcacaaaatggtaatctgttagttgaa 614 ||||| ||||||| ||||||||||||||| || || || ||||||||| |||||||| Sbjct: 22267617 gctgacgcacaaaagatggaagagtgggctcgttcccagaatggtaattctttagttgag 22267558 Query: 615 ttttcttccagagatggggaaatagagtccattctgaaagatatatcagaaagggcccag 674 ||||| |||| |||||| ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 22267557 ttttcatccaaagatggagaaatagaggccattctgaaagatatttcagaaagggcccag 22267498 Query: 675 gataagggaaacttcagctacagccggttctttgctgttggcttgttccgtttgcttgag 734 | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 22267497 ggtaagggaagcttcagctacagccggttctttgcagttggcttgttccgtttgcttgag 22267438 Query: 735 ctctcaaatgcgacggagccaaccgtactggacaaggttgttcttgccattaat 788 || ||||||| || ||||||||| |||| |||||||||||| ||||||||||| Sbjct: 22267437 cttgcaaatgcaacagagccaaccatactagacaaggttgttattgccattaat 22267384 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 22269475 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 22269416 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 22269415 tcgacggcg 22269407 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Minus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgt 2269 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 22266225 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgt 22266167 Score = 46.1 bits (23), Expect = 0.64 Identities = 47/55 (85%) Strand = Plus / Minus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtc 269 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| Sbjct: 22269377 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtc 22269323 Score = 44.1 bits (22), Expect = 2.5 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Minus Query: 2528 ttttgtaatttctccttctctgtgttcgaatgtaccgttttcttcacttcgttgacaata 2587 |||||||||| |||||| || |||||| |||||| ||||||| | ||| ||||||||| Sbjct: 22265589 ttttgtaatt-ctccttttcagtgttcaaatgtatcgttttcctt--ttctttgacaata 22265533 Query: 2588 tatgaagag 2596 ||||||||| Sbjct: 22265532 tatgaagag 22265524
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 280 bits (141), Expect = 2e-71 Identities = 237/269 (88%) Strand = Plus / Minus Query: 286 ttccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattc 345 ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| |||||||| | Sbjct: 73575 ttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaagcgtcctatcc 73516 Query: 346 caagcatgtacagtacagttctacaagaacttttggtgcagcaacatctgatgagataca 405 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 73515 taagcatttacagtacagttctacaagaacttttggtacagcaacatctgatgagataca 73456 Query: 406 aaagtacgtatcagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagc 465 ||| || ||||| |||||| | |||||||||||||| ||||| |||||||||||||| | Sbjct: 73455 aaacaacatatcaatatgatgcggtgtttgctcttggttttgtgaccgtctatgaccaac 73396 Query: 466 ttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacgg 525 | |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| | Sbjct: 73395 tcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagcatatataacag 73336 Query: 526 cgttaaatgaagatcctgagcaatacagg 554 ||||||| ||||| ||||||||||||||| Sbjct: 73335 cgttaaacgaagaccctgagcaatacagg 73307 Score = 266 bits (134), Expect = 4e-67 Identities = 209/234 (89%) Strand = Plus / Minus Query: 555 gctgatgcacaaaggatggaagagtgggcacgctcacaaaatggtaatctgttagttgaa 614 ||||| ||||||| ||||||||||||||| || || || ||||||||| |||||||| Sbjct: 72863 gctgacgcacaaaagatggaagagtgggctcgttcccagaatggtaattctttagttgag 72804 Query: 615 ttttcttccagagatggggaaatagagtccattctgaaagatatatcagaaagggcccag 674 ||||| |||| |||||| ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 72803 ttttcatccaaagatggagaaatagaggccattctgaaagatatttcagaaagggcccag 72744 Query: 675 gataagggaaacttcagctacagccggttctttgctgttggcttgttccgtttgcttgag 734 | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 72743 ggtaagggaagcttcagctacagccggttctttgcagttggcttgttccgtttgcttgag 72684 Query: 735 ctctcaaatgcgacggagccaaccgtactggacaaggttgttcttgccattaat 788 || ||||||| || ||||||||| |||| |||||||||||| ||||||||||| Sbjct: 72683 cttgcaaatgcaacagagccaaccatactagacaaggttgttattgccattaat 72630 Score = 89.7 bits (45), Expect = 5e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 120 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 179 |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct: 74721 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 74662 Query: 180 tcgacggcg 188 ||||||||| Sbjct: 74661 tcgacggcg 74653 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Minus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgt 2269 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 71471 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgt 71413 Score = 46.1 bits (23), Expect = 0.64 Identities = 47/55 (85%) Strand = Plus / Minus Query: 215 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtc 269 |||| |||||| || |||| | |||||||| || || |||||||||||||||||| Sbjct: 74623 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtc 74569 Score = 44.1 bits (22), Expect = 2.5 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Minus Query: 2528 ttttgtaatttctccttctctgtgttcgaatgtaccgttttcttcacttcgttgacaata 2587 |||||||||| |||||| || |||||| |||||| ||||||| | ||| ||||||||| Sbjct: 70835 ttttgtaatt-ctccttttcagtgttcaaatgtatcgttttcctt--ttctttgacaata 70779 Query: 2588 tatgaagag 2596 ||||||||| Sbjct: 70778 tatgaagag 70770
>dbj|AK059695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B12, full insert sequence Length = 1512 Score = 83.8 bits (42), Expect = 3e-12 Identities = 72/82 (87%) Strand = Plus / Plus Query: 2211 gtttaccgcaacttactgtcgaaattggttcaagccaaggaacttcttaaggaatacgtc 2270 |||||||| ||| |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct: 1040 gtttaccggaacatactctccaaattggtccaggctaaggaacttctcaaggaatacgtg 1099 Query: 2271 gagagggaaaagaagaagagag 2292 || ||||||||||||||||||| Sbjct: 1100 gaaagggaaaagaagaagagag 1121 Score = 44.1 bits (22), Expect = 2.5 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 2528 ttttgtaatttctccttctctgtgttcgaatgtaccgttttcttcacttcgttgacaata 2587 |||||||||| |||||| || |||||| |||||| ||||||| | ||| ||||||||| Sbjct: 1383 ttttgtaatt-ctccttttcagtgttcaaatgtatcgttttcctt--ttctttgacaata 1439 Query: 2588 tatgaagag 2596 ||||||||| Sbjct: 1440 tatgaagag 1448
>gb|AY342161.1| Solanum tuberosum cultivar Kennebec light-regulated chloroplast-localized protein (Thf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1281 Score = 79.8 bits (40), Expect = 5e-11 Identities = 121/148 (81%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagggtac 479 |||||||| |||||||| || || ||||| || || ||||| || |||||||| || ||| Sbjct: 412 tatgatcccgtgtttgccctaggttttgttactgtgtatgatcaacttatggagggctac 471 Query: 480 cccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaatgaagat 539 || || | |||||| | ||||||||||||| ||||| || |||| |||| || ||| Sbjct: 472 ccaagtgaagaggaccgtaatgccatcttcaaagcatatatagaggcgctaaaggaggat 531 Query: 540 cctgagcaatacagggctgatgcacaaa 567 |||||||||||||| ||||||||||||| Sbjct: 532 cctgagcaatacagagctgatgcacaaa 559
>ref|NM_127659.1| Arabidopsis thaliana THF1 (THF1) mRNA, complete cds Length = 1246 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 437 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 492 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 869 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 916
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete sequence Length = 129667 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 43483 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 43428
>gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) mRNA, complete cds Length = 953 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 322 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 377 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 754 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 801
>gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; F5H14.14) mRNA, complete cds Length = 1143 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 432 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 487 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 864 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 911
>gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete sequence Length = 1246 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 437 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 492 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||| ||| | |||||||| || ||||||||||| ||||||||| Sbjct: 869 caagccaatgaattgcttaaggagtatgtcgagagggagaagaagaag 916
>emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 419 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 474
>emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1131 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 397 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 452 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 830 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 877
>gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid formation 1 (THF1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1245 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 475 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| Sbjct: 436 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 491 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||| ||| | |||||||| || ||||||||||| ||||||||| Sbjct: 868 caagccaatgaattgcttaaggagtatgtcgagagggagaagaagaag 915
>emb|BX818803.1|CNS0A8TL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 324 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 41 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 88
>emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1158 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2241 caagccaaggaacttcttaaggaatacgtcgagagggaaaagaagaag 2288 |||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 858 caagccaaggaattgcttaaggagtatgtcgagagggagaagaagaag 905
>gb|U76215.1|TAU76215 Triticum aestivum NBS-LRR type protein pseudogene, complete sequence Length = 3696 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagtaaa 1339 |||||||||||||||| ||||||||||| Sbjct: 3247 tcatctattttggaacggagggagtaaa 3220
>gb|AC003694.1|AC003694 Mus musculus chromosome 19, clone CIT282B21, complete sequence Length = 186314 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 491 ggacagggatgccatcttcaagtc 514 |||||||||||||||||||||||| Sbjct: 44823 ggacagggatgccatcttcaagtc 44800
>gb|AC101886.16| Mus musculus chromosome 15, clone RP23-413E14, complete sequence Length = 233347 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1358 tgcatctgatatttatttattta 1380 ||||||||||||||||||||||| Sbjct: 225937 tgcatctgatatttatttattta 225959
>gb|AC005189.2| Homo sapiens PAC clone RP5-905J8 from 7p11.2-p21, complete sequence Length = 176413 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1128 aaatattttgagaaaatgtgaac 1150 ||||||||||||||||||||||| Sbjct: 173480 aaatattttgagaaaatgtgaac 173458
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1647 atttatttttcaacctctacttt 1669 ||||||||||||||||||||||| Sbjct: 19929460 atttatttttcaacctctacttt 19929482
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1317 tattttggaacagagggagtaaa 1339 ||||||||||||||||||||||| Sbjct: 1582721 tattttggaacagagggagtaaa 1582699
>gb|AC012619.6| Homo sapiens chromosome 5 clone CTD-2022K1, complete sequence Length = 89196 Score = 46.1 bits (23), Expect = 0.64 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1353 tgatttgcatctgatatttatttattt 1379 ||||||||||||| ||||||||||||| Sbjct: 36965 tgatttgcatctgttatttatttattt 36939
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0217C03 Length = 58309 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1647 atttatttttcaacctctacttt 1669 ||||||||||||||||||||||| Sbjct: 36546 atttatttttcaacctctacttt 36568
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1317 tattttggaacagagggagtaaa 1339 ||||||||||||||||||||||| Sbjct: 19824 tattttggaacagagggagtaaa 19802
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1647 atttatttttcaacctctacttt 1669 ||||||||||||||||||||||| Sbjct: 3608 atttatttttcaacctctacttt 3630
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 41 ccttttgccctcaccggcggtgt 63 ||||||||||||||||||||||| Sbjct: 6142967 ccttttgccctcaccggcggtgt 6142989
>gb|AC101935.10| Mus musculus chromosome 15, clone RP24-76H22, complete sequence Length = 216277 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1358 tgcatctgatatttatttattta 1380 ||||||||||||||||||||||| Sbjct: 43037 tgcatctgatatttatttattta 43059
>emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chromosome 4, complete sequence Length = 204428 Score = 46.1 bits (23), Expect = 0.64 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2109 cattatttgctgatataacaatagata 2135 ||||||||||||| ||||||||||||| Sbjct: 126639 cattatttgctgacataacaatagata 126665
>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence Length = 102061 Score = 46.1 bits (23), Expect = 0.64 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1307 aaacttcatctattttggaacagagggagta 1337 ||||||||| ||||||| ||||||||||||| Sbjct: 73279 aaacttcatgtattttgaaacagagggagta 73309
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 37602 tcatctattttggaacggagggagta 37577
>gb|AC190415.3| Gallus gallus BAC clone CH261-189M20 from chromosome z, complete sequence Length = 216229 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 977 catctcttctttacaaaaccattaaa 1002 ||||||||||||||||| |||||||| Sbjct: 72726 catctcttctttacaaatccattaaa 72701
>emb|CU074422.1| M.spretus DNA sequence from clone XX-CH35_123K8 on chromosome 7, complete sequence Length = 195668 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 931 ctagaattgggtacaaaaagag 952 |||||||||||||||||||||| Sbjct: 104394 ctagaattgggtacaaaaagag 104373
>gb|AC189386.1| Brassica rapa subsp. pekinensis clone KBrB052L10, complete sequence Length = 150609 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1307 aaacttcatctattttggaacagagggagt 1336 ||||||||| ||||||| |||||||||||| Sbjct: 108688 aaacttcatgtattttgaaacagagggagt 108717
>gb|AC189189.1| Brassica rapa subsp. pekinensis clone KBrB002E24, complete sequence Length = 121528 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1307 aaacttcatctattttggaacagagggagt 1336 ||||||||| ||||||| |||||||||||| Sbjct: 37646 aaacttcatgtattttgaaacagagggagt 37617
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 8361 tcatctattttggaacggagggagta 8336 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 8396 tcatctattttggaacggagggagta 8421
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 106593 tcatctattttggaacggagggagta 106568
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 11698 tcatctattttggaacggagggagta 11673
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 cccatggcggccatatcgtcgc 138 |||||||||||||||||||||| Sbjct: 2996924 cccatggcggccatatcgtcgc 2996945
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 22300 tcatctattttggaacggagggagta 22275
>gb|AY558054.1| Saccharomyces cerevisiae clone FLH006902.01X YPR082C gene, complete cds Length = 432 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1298 caaaatctgaaacttcatctat 1319 |||||||||||||||||||||| Sbjct: 211 caaaatctgaaacttcatctat 190
>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence Length = 44255 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 gtgagcgtctccggtggcgtca 219 |||||||||||||||||||||| Sbjct: 10405 gtgagcgtctccggtggcgtca 10384
>gb|AY510456.1| Trypanosoma cruzi polypyrimidine binding protein (PTB) gene, complete cds Length = 4056 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1137 gagaaaatgtgaacagccgaaaaaga 1162 ||||||| |||||||||||||||||| Sbjct: 3580 gagaaaaagtgaacagccgaaaaaga 3605
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2271 gagagggaaaagaagaagagag 2292 |||||||||||||||||||||| Sbjct: 68143 gagagggaaaagaagaagagag 68122
>gb|U51033.2|YSCP9513 Saccharomyces cerevisiae chromosome XVI cosmid 9513 Length = 44455 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1298 caaaatctgaaacttcatctat 1319 |||||||||||||||||||||| Sbjct: 20263 caaaatctgaaacttcatctat 20284
>gb|AC093714.2| Homo sapiens BAC clone RP11-458K10 from 7, complete sequence Length = 142751 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1355 atttgcatctgatatttatttattta 1380 ||||||||||| |||||||||||||| Sbjct: 66168 atttgcatctgctatttatttattta 66143
>gb|AC103753.2| Homo sapiens chromosome 15, clone RP11-460N1, complete sequence Length = 179822 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 ctattccaagcatgtacagtacagtt 365 |||||||||||||||||||| ||||| Sbjct: 85716 ctattccaagcatgtacagtccagtt 85741
>gb|AC104466.10| Homo sapiens 3 BAC RP11-35A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85550 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2142 tttcttcttgctcaatagcttt 2163 |||||||||||||||||||||| Sbjct: 72934 tttcttcttgctcaatagcttt 72955
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 1397 tcatctattttggaacggagggagta 1372
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 1398 tcatctattttggaacggagggagta 1373
>ref|XM_814197.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511727.150) partial mRNA Length = 1311 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1137 gagaaaatgtgaacagccgaaaaaga 1162 ||||||| |||||||||||||||||| Sbjct: 278 gagaaaaagtgaacagccgaaaaaga 303
>gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, complete sequence Length = 160250 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1130 atattttgagaaaatgtgaaca 1151 |||||||||||||||||||||| Sbjct: 152517 atattttgagaaaatgtgaaca 152496
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1317 tattttggaacagagggagtaa 1338 |||||||||||||||||||||| Sbjct: 21573304 tattttggaacagagggagtaa 21573283
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1308 aacttcatctattttggaacagagggagta 1337 ||||||| ||||||||||||||||||||| Sbjct: 8580 aacttcaattattttggaacagagggagta 8551
>emb|AL391600.16| Human DNA sequence from clone RP11-210L5 on chromosome 13, complete sequence Length = 176085 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1359 gcatctgatatttatttatttagtaa 1384 ||||||| |||||||||||||||||| Sbjct: 13566 gcatctgctatttatttatttagtaa 13591
>emb|AL353752.6| Human DNA sequence from clone RP11-497K15 on chromosome 9 Contains a NADH dehydrogenase (ubiquinone) 1 alpha (MLRQ) (NDUFA4) pseudogene, complete sequence Length = 177921 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1581 ctatgtgcacattcagatttttctattggc 1610 |||||| ||||||||||||||| ||||||| Sbjct: 48197 ctatgttcacattcagatttttttattggc 48168
>gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, complete sequence Length = 160454 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1130 atattttgagaaaatgtgaaca 1151 |||||||||||||||||||||| Sbjct: 40474 atattttgagaaaatgtgaaca 40453
>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5, complete sequence Length = 181599 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1125 gacaaatattttgagaaaatgt 1146 |||||||||||||||||||||| Sbjct: 157073 gacaaatattttgagaaaatgt 157052
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1317 tattttggaacagagggagtaa 1338 |||||||||||||||||||||| Sbjct: 33478 tattttggaacagagggagtaa 33457
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1317 tattttggaacagagggagtaa 1338 |||||||||||||||||||||| Sbjct: 35760 tattttggaacagagggagtaa 35739
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023, complete sequence Length = 91039 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2278 aaaagaagaagagagcagagag 2299 |||||||||||||||||||||| Sbjct: 32595 aaaagaagaagagagcagagag 32616
>emb|BX649481.10| Zebrafish DNA sequence from clone CH211-103D13 in linkage group 4, complete sequence Length = 192230 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1022 aaagcaaacaataattaattaa 1043 |||||||||||||||||||||| Sbjct: 168532 aaagcaaacaataattaattaa 168553
>gb|AY946542.1| Oryza sativa microRNA MIR438g precursor, gene, partial sequence Length = 240 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1317 tattttggaacagagggagtaa 1338 |||||||||||||||||||||| Sbjct: 219 tattttggaacagagggagtaa 240
>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds Length = 11387 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 2024 tcatctattttggaacggagggagta 1999
>gb|DQ154924.1| Triticum turgidum RAB7 (RAB7) gene, exons 1, 2 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 9338 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 3574 tcatctattttggaacggagggagta 3599
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1312 tcatctattttggaacagagggagta 1337 |||||||||||||||| ||||||||| Sbjct: 6894 tcatctattttggaacggagggagta 6919
>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete sequence Length = 206286 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1025 gcaaacaataattaattaatta 1046 |||||||||||||||||||||| Sbjct: 112890 gcaaacaataattaattaatta 112911 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 496,285,063 Number of extensions: 29532278 Number of successful extensions: 211573 Number of sequences better than 10.0: 73 Number of HSP's gapped: 211566 Number of HSP's successfully gapped: 113 Length of query: 2624 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2601 Effective length of database: 18,503,978,556 Effective search space: 48128848224156 Effective search space used: 48128848224156 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
