ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf133c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK106667:Os10g0101100 33 0.46
2AK102684:Os03g0268300 29 6.7
3AK062265:Os03g0268300 29 6.7
4AK111106:Os05g0342100 29 6.7
5Os09g0425300:Os09g0425300 28 8.7

>AK106667:Os10g0101100 |
          Length = 460
 Score = 32.7 bits (73), Expect = 0.46
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
 Frame = -2

Query: 866 LELLFLRPCACIA------SKSSSDTAIGRPLDGWDPSLLFQLVPAFFRLFSLAAGFVWL 705
           L LL L  C+C++      S SSS   + R L G+D +L F+L   +  +  +A   ++ 
Sbjct: 16  LLLLLLVTCSCLSARERSNSSSSSSRRVVRHLPGFDGALPFELETGYVEVDRIAGVRLFY 75

Query: 704 CKLRHSQLRVETPSPSYLGWLMAGLSCPSANHL 606
             +R      + P    L WL  G  C + + L
Sbjct: 76  YFIRSESSPADDP---LLLWLTGGPGCSAFSGL 105



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>AK102684:Os03g0268300 |
          Length = 463

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 897  HASNWCRCIYVHALARL-AAQQTVPAADACYLVGQN 1001
            H ++W   IY H + RL AA Q VP +  C + G N
Sbjct: 171  HINSWVTDIYCHKVIRLSAATQEVPRSIVCNVHGVN 206



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>AK062265:Os03g0268300 |
          Length = 300

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 897  HASNWCRCIYVHALARL-AAQQTVPAADACYLVGQN 1001
            H ++W   IY H + RL AA Q VP +  C + G N
Sbjct: 8    HINSWVTDIYCHKVIRLSAATQEVPRSIVCNVHGVN 43



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>AK111106:Os05g0342100 |
          Length = 188

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +1

Query: 772 DGSHPSRGRPIAV---SLDDLLAIHAHGRRKSSSSSI 873
           DG H +R RP+ V   +    LA+ AHG   ++SSS+
Sbjct: 9   DGEHEARQRPVVVVVAAAAPTLALPAHGGAPANSSSV 45



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>Os09g0425300:Os09g0425300 |
          Length = 294

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = +1

Query: 343 PLQEQAPRLMPRAPISTRTSP---SCA*GASELTGALD*VKMLLLRSMLEA 486
           P+    PRL+PR+ ++ R SP   S A  A++ T A+D V+ ++L  +  A
Sbjct: 188 PIPSPPPRLIPRSFLAKRLSPTGASDAATATKTTKAMDFVQTIVLYCLQHA 238


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,426,192
Number of extensions: 474053
Number of successful extensions: 1299
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1294
Number of HSP's successfully gapped: 5
Length of query: 364
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,315,673
Effective search space: 2964706326
Effective search space used: 2964706326
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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