ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf135g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121176:Os08g0112800 233 1e-61
2AK062541:Os10g0336600 37 0.021
3Os09g0325100:Os09g0325100 30 1.9
4AK110612:Os05g0277200 30 2.5
5AK100533:Os04g0443000 30 2.5
6Os07g0651500:Os07g0651500 29 4.3
7Os12g0125700:Os12g0125700 28 5.6
8Os10g0351300:Os10g0351300 28 5.6
9AK067139:Os04g0645200 28 7.3

>AK121176:Os08g0112800 |
          Length = 142
 Score =  233 bits (593), Expect = 1e-61
 Identities = 106/140 (75%), Positives = 119/140 (85%)
 Frame = +1

Query: 121 MGIGEHFEGVKQHWARNFAFLDYFKKVYGRDQPLPKWSDADVEEFIASDPVYGPQLKALR 300
           MGI EH EG+K HWA+NF+FLDYFKKVYGRD+PLPKW+DADV+EFIASDPVYGPQLKA+R
Sbjct: 1   MGIHEHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMR 60

Query: 301 ESRKFXXXXXXXXXXXXXXVAFKYSKSPHGVVLATGFGALTGAVLGSEVAEHWYELYKMD 480
           ESRKF              +A KYSK+PHGVVLATGFGA+ GAV+GSEVAEHWY+LYK D
Sbjct: 61  ESRKFALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTD 120

Query: 481 KQGANLRFIYWWEDKVAGQK 540
           KQGANLRFIYWWEDKVAG +
Sbjct: 121 KQGANLRFIYWWEDKVAGNQ 140



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>AK062541:Os10g0336600 |
          Length = 137

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 23/44 (52%), Positives = 26/44 (59%)
 Frame = +1

Query: 358 VAFKYSKSPHGVVLATGFGALTGAVLGSEVAEHWYELYKMDKQG 489
           VA KYSK     VL+    +   +VL  EVAEHWY LYK D QG
Sbjct: 25  VALKYSK-----VLSWPLTSKQ-SVLRLEVAEHWYRLYKTDNQG 62



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>Os09g0325100:Os09g0325100 |
          Length = 727

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 408 VRSAHWRRARIGGGRALVRALQDGQAGGQPQVHLLVGGQGRRPEELK 548
           V SA  RR   GGG AL R   +G+ G   +      G+GRR  E +
Sbjct: 573 VASAVGRRCGAGGGWALARRRPEGRRGEAARKRWEAAGKGRRRGEAR 619



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>AK110612:Os05g0277200 |
          Length = 284

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 563 LCRSLLQFFWPATLSSHQ*MNLRLAPCLSIL*SSYQCSATSDPSTAPV-SAPNPVASTTP 387
           LC S +  + PA   S     L L P  S   S+   +A  +P   P+ S P P A+ + 
Sbjct: 44  LCSSCVLLYHPAAFCS---ACLLLFPPASASASASAATAVQEPRLDPILSPPGPTAACSS 100

Query: 386 CGL 378
           CGL
Sbjct: 101 CGL 103



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>AK100533:Os04g0443000 |
          Length = 691

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 393 RAGDRVRSAHWRRARIGGGRALVRALQDGQAGGQPQVHLLVGGQGRRPEELKKTSA*GCT 572
           R G  +R  H    + G GR L R        G P       G G RP+  +++S  GC 
Sbjct: 72  RRGFSIRR-HRTEGKDGVGRGLTRRYFVCHRAGNPPAKPFAAGAGDRPQRNRRSSRCGCK 130

Query: 573 CFSFTG 590
            +   G
Sbjct: 131 AYMRIG 136



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>Os07g0651500:Os07g0651500 |
          Length = 1881

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -1

Query: 751 SVGAKMNIIENWEQTHSRENKIHCPIDCQYAPYW 650
           S GAK +++  W +T+ + +K H    C++   W
Sbjct: 752 SPGAKRSMLTEWFETNKKNSKAHSLTYCEFPKEW 785



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>Os12g0125700:Os12g0125700 |
          Length = 694

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 443 SDPSTAPVSAPNPVASTTPCGL 378
           S P  +P S P P+ S TPCG+
Sbjct: 420 SSPHISPRSTPLPLTSATPCGV 441



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>Os10g0351300:Os10g0351300 |
          Length = 1780

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 656  RCILAINWTMYFIFSTMGLLPVLYDVHLCTYGKLNASTFQPKK 784
            RC+  + W   +  +T+  LP+LY  H      LN    +PK+
Sbjct: 969  RCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPKR 1011



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>AK067139:Os04g0645200 |
          Length = 202

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = -3

Query: 476 IL*SSYQCSATSDPSTAPVSAPNPVASTTPCGLLEYLK 363
           ++ SS   S++S PS++   +P+P AS++ CG++   K
Sbjct: 114 VMASSSSSSSSSLPSSSSSLSPSPPASSSSCGVVVITK 151


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,314,475
Number of extensions: 428935
Number of successful extensions: 1501
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1496
Number of HSP's successfully gapped: 9
Length of query: 265
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 166
Effective length of database: 11,435,796
Effective search space: 1898342136
Effective search space used: 1898342136
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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