ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf138b06 |
|---|---|
| Clone Library Name | barley_pub |
>Os02g0231500:Os02g0231500 | Length = 143 Score = 32.3 bits (72), Expect = 0.44 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 245 QPASSSAWRPTRSSDSKRCRK-CESMAS--PVPRLLSKPCISNQVSLVYAFVGTSPPSHV 415 Q +S+++ PT S +R R+ C + P P + P ++NQ V +S S Sbjct: 27 QGSSTASVAPTGGSPRRRRRRSCTTPGGRRPSPSTSATPSVTNQRQFHLIVVNSSSISSS 86 Query: 416 CTLHLGRHGWQLISNF 463 LH H W++++ F Sbjct: 87 LILHSHSHPWRVVAEF 102
>AK109779:Os05g0477800 | Length = 257 Score = 32.3 bits (72), Expect = 0.44 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 208 RGSSVRTPLAVRAARIVVGMAPHKVVGLQTVPQ 306 +G VR P AV AAR+ VG+ + VG +PQ Sbjct: 49 QGEGVRRPAAVHAARLRVGLVHRRHVGYSWIPQ 81
>AK071394:Os01g0223000 | Length = 384 Score = 32.0 bits (71), Expect = 0.58 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 367 GQPGVRVCGHLATITCMHTTPRKAWMAAHF-ELFHSIRSKLWI*VQM-WFQNR*TIPGEV 540 G PG +CG+ ITC + R W H E+ + ++ W+ +++ W QN + Sbjct: 311 GGPGTALCGNQGAITCEDPSARLFWDMVHMTEVAYRYIAEDWLRIRVTWEQN------NL 364 Query: 541 IVFQI*KK 564 VF++ KK Sbjct: 365 SVFRVHKK 372
>AK102196:Os10g0529400 | Length = 93 Score = 31.6 bits (70), Expect = 0.75 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +3 Query: 270 APQGRRTPNGAA----SVSPWPPPCQGCSPSLASPTRSA 374 AP+GR + A S S W C+GC+P+ +SP S+ Sbjct: 3 APRGRDASSAATASATSTSCWVASCRGCTPATSSPAPSS 41
>AK103199:Os01g0180000 | Length = 520 Score = 30.8 bits (68), Expect = 1.3 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +3 Query: 315 PWPPPCQGCSPSLASPTRSAWCTRLWAPRH 404 P PPPC G +P+L+ P + W P H Sbjct: 456 PPPPPCGGATPALSPPPPPPYYPGPWPPVH 485
>Os06g0610100:Os06g0610100 | Length = 238 Score = 30.8 bits (68), Expect = 1.3 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -1 Query: 136 RRRPEARPGSDKPYPEATDARRPVSSRKQMCQH 38 RRRP RPG+ PE D RRP+ R+ +H Sbjct: 110 RRRPPVRPGAAHAAPE-RDTRRPLRRRRPAVRH 141
>Os02g0190700:Os02g0190700 | Length = 213 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -1 Query: 220 QMIPLPKQ----RWKKGVGSDARVHGRWPQWLRR-RPEARPGSDKPYPEATD 80 Q +P P+Q RW+ G A GR P +RR RP P S ATD Sbjct: 13 QTLPRPQQGQEDRWRSPPGRRAATDGRRPDRIRRARPRVPPASKFQNRRATD 64
>AK104250:Os11g0127800 | Length = 230 Score = 30.0 bits (66), Expect = 2.2 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +3 Query: 288 TPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRTFS 467 TP +S P PPPC S S AS +L TS +GSS R+ S Sbjct: 16 TPRRPSSCLPPPPPCSSSSSSYASHGFKLLQPQLL------FINRLTSRNSNGSSRRSIS 69 Query: 468 LNPFQALDIGSDVVSEQVNN 527 + + G+D S + Sbjct: 70 ILSLRCSSSGTDSASSSATS 89
>AK104179:Os11g0127800 | Length = 230 Score = 30.0 bits (66), Expect = 2.2 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +3 Query: 288 TPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRTFS 467 TP +S P PPPC S S AS +L TS +GSS R+ S Sbjct: 16 TPRRPSSCLPPPPPCSSSSSSYASHGFKLLQPQLL------FINRLTSRNSNGSSRRSIS 69 Query: 468 LNPFQALDIGSDVVSEQVNN 527 + + G+D S + Sbjct: 70 ILSLRCSSSGTDSASSSATS 89
>AK104015:Os11g0127800 | Length = 230 Score = 30.0 bits (66), Expect = 2.2 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +3 Query: 288 TPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRTFS 467 TP +S P PPPC S S AS +L TS +GSS R+ S Sbjct: 16 TPRRPSSCLPPPPPCSSSSSSYASHGFKLLQPQLL------FINRLTSRNSNGSSRRSIS 69 Query: 468 LNPFQALDIGSDVVSEQVNN 527 + + G+D S + Sbjct: 70 ILSLRCSSSGTDSASSSATS 89
>AK059969:Os11g0127800 | Length = 230 Score = 30.0 bits (66), Expect = 2.2 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +3 Query: 288 TPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRTFS 467 TP +S P PPPC S S AS +L TS +GSS R+ S Sbjct: 16 TPRRPSSCLPPPPPCSSSSSSYASHGFKLLQPQLL------FINRLTSRNSNGSSRRSIS 69 Query: 468 LNPFQALDIGSDVVSEQVNN 527 + + G+D S + Sbjct: 70 ILSLRCSSSGTDSASSSATS 89
>AY224430:Os07g0685000 | Length = 476 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 291 PNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAP 398 PNGA S SPW P CS S +SPT ++ C+ +P Sbjct: 353 PNGAWS-SPWIQP--NCSVSASSPTSTSTCSDNGSP 385
>AK119625:Os07g0685000 | Length = 476 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 291 PNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAP 398 PNGA S SPW P CS S +SPT ++ C+ +P Sbjct: 353 PNGAWS-SPWIQP--NCSVSASSPTSTSTCSDNGSP 385
>AK104095:Os07g0685000 | Length = 476 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 291 PNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAP 398 PNGA S SPW P CS S +SPT ++ C+ +P Sbjct: 353 PNGAWS-SPWIQP--NCSVSASSPTSTSTCSDNGSP 385
>AK067325:Os02g0267000 | Length = 298 Score = 29.6 bits (65), Expect = 2.8 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +3 Query: 465 SLNPFQALDIGSDVVSEQVNNTWRSDCVSDL 557 SL+ F D+G +V+E+V +R C++D+ Sbjct: 137 SLSMFPTFDVGDRIVAEKVTYYFRKPCINDI 167
>AK065816:Os07g0685000 | Length = 476 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 291 PNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAP 398 PNGA S SPW P CS S +SPT ++ C+ +P Sbjct: 353 PNGAWS-SPWIQP--NCSVSASSPTSTSTCSDNGSP 385
>AK100534:Os03g0214900 | Length = 979 Score = 29.3 bits (64), Expect = 3.7 Identities = 23/86 (26%), Positives = 34/86 (39%) Frame = +3 Query: 270 APQGRRTPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGS 449 AP+ P+ SP PPP P SPT + + W + E +G+ Sbjct: 130 APENALPPSSPPPPSPPPPPPSSPPPVPPSPTAAPTTGQSW---------NSEPERKEGA 180 Query: 450 SFRTFSLNPFQALDIGSDVVSEQVNN 527 + A D+G DV +E+V N Sbjct: 181 T----------ATDVGHDVKTEKVTN 196
>AK119999:Os04g0386900 | Length = 189 Score = 29.3 bits (64), Expect = 3.7 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 98 GFVAAGPGLWSPSQPLRPPAVHP-RVTTHALLPPLLGQGDHLCALLLPFVQP 250 G +AAG + + P RPP P +V H +L PLLG+ C + VQP Sbjct: 35 GHIAAG----TEAAPPRPPEPEPEKVARHGVL-PLLGKPYFTCIMCKSHVQP 81
>AK111886:Os05g0422300 | Length = 721 Score = 29.3 bits (64), Expect = 3.7 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Frame = +2 Query: 104 VAAGPGLWSP-SQPLRPPAVHPRVTTHALLPPLLGQGDHLCALLLPFVQPASSSAWRPTR 280 +AAG P ++P P + P +L G LC + + PAS+SA + Sbjct: 1 MAAGTASPPPDAEPPECPVCLSPFDAASAAPRVLPCGHSLCGPCIASLPPASASA---SA 57 Query: 281 SSDSKRCRKCESMASPVPRLLSKPCISNQVSLVYAFVGTSPPS 409 S+ S RC C S P R L + ++L+ SPP+ Sbjct: 58 SAASLRCPLC-SQCVPFSRALGPSSLPKNLALISLL--PSPPN 97
>Os03g0717300:Os03g0717300 | Length = 160 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 270 APQGRRTPNGAASVSPWPPPCQGCSPSLASPT 365 +P G R P A + P PP SPS SP+ Sbjct: 75 SPSGSRAPTSARAPPPPPPTSPPASPSSCSPS 106
>AK070774:Os02g0692000 | Length = 389 Score = 28.9 bits (63), Expect = 4.9 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 5/110 (4%) Frame = +3 Query: 288 TPNGAASVSPWPP--PCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRT 461 TPN S W P P + CS L S WC ++ P T D SS T Sbjct: 11 TPN-LGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAF--DITGSSSDDSSGPT 67 Query: 462 FSLNPFQALDIGSD---VVSEQVNNTWRSDCVSDLKKR*LGLSSNCGAGG 602 FS + + + +VS + S L+ R LG S++ G+GG Sbjct: 68 FSPLVIAIIGVLASAFLLVSYYTIISKYCGTFSSLRNRLLGSSAHRGSGG 117
>Os02g0236500:Os02g0236500 | Length = 1084 Score = 28.9 bits (63), Expect = 4.9 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Frame = +2 Query: 131 PSQPLRPPAVHPRV-------TTHALLPPLLGQGDHLCALLLPFVQPASSSAWRPTRSSD 289 P P P A PR T + PP+ + +P +AW P S+ Sbjct: 927 PRCPAAPTAARPRSQRACPSRATQSAAPPVASRAR----------EPWWPTAWSPPSSAP 976 Query: 290 SKRCRKCESMASPVPRLLSKPCISNQVSLVYAFVGTSPPSH 412 ++ CR C A P +++ ++S V P H Sbjct: 977 ARACRPCRHSAPNRPAVIAVISACPRLSPVSPLRSKPPRRH 1017
>AK120823:Os01g0780600 | Length = 425 Score = 28.9 bits (63), Expect = 4.9 Identities = 28/92 (30%), Positives = 32/92 (34%), Gaps = 6/92 (6%) Frame = -2 Query: 306 LRHRLESDD-----LVGRHADDDAGCTNGKRSAHXXXXXXXXXXXRAWVVTRGCTAGGRS 142 LRHRL ++D +V A D G A GC A GR Sbjct: 239 LRHRLRAEDTGLLHVVHGRARDRVHVAGGGGGGQPAWGAPCREPLVAVADHHGCQAHGRV 298 Query: 141 GCDGDQRPGP-AATNPIQRRPMREGRSPPENR 49 C G R P AA P RR R+P R Sbjct: 299 PCRGGARHQPQAAQVPGARRRRTRLRAPRRRR 330
>AK102659:Os10g0351500 | Length = 664 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 215 HLCALLLPFVQPASSSAWRPTRSSDSKRC---RKCESMASPVPRLLSKPCISN 364 HL LL+ F A+ +A RSS S C +C + P P L+ C+S+ Sbjct: 9 HLTVLLVLFATSAAQAA--ADRSSSSSSCGGGERCGDLLLPFPFHLNSSCVSS 59
>Os07g0193800:Os07g0193800 | Length = 350 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 12/62 (19%) Frame = +3 Query: 303 ASVSPWPPPCQGCS------PSLASPTRS------AWCTRLWAPRHHHMYAHYTSEGMDG 446 A+ SP PPP Q S PS +P R + LW P HH + +S D Sbjct: 86 AATSPPPPPPQASSRNPRPLPSPPAPPRRRMDPAPSLAAELWRPHHHRHHFEASSVVTDQ 145 Query: 447 SS 452 S Sbjct: 146 GS 147
>AK066752:Os04g0590900 | Length = 383 Score = 28.1 bits (61), Expect = 8.3 Identities = 30/114 (26%), Positives = 41/114 (35%), Gaps = 5/114 (4%) Frame = +3 Query: 300 AASVSPWPP--PCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSSFRTFSLN 473 A+S W P P + CS L S WC ++ P A +++ G F + Sbjct: 2 ASSAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIA 61 Query: 474 PFQALDIGSDVVSEQVNNTWRSDCVSDLKKR*LGLSSN---CGAGGPYEVLHGH 626 L +VS + VS L+ R G SS G G HGH Sbjct: 62 IIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGH 115
>AK065880:Os07g0467600 | Length = 176 Score = 28.1 bits (61), Expect = 8.3 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 13/72 (18%) Frame = +3 Query: 288 TPNGAASVSPWPPP-------------CQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYT 428 TP +SP PPP + +PSL +P+ SA +R+ P H H + Sbjct: 4 TPLQCRCLSPPPPPPPHKRVRASPRPRLRDPNPSLPAPSESASSSRIRLPTHPHRRG--S 61 Query: 429 SEGMDGSSFRTF 464 + GS R F Sbjct: 62 GDPAAGSELRVF 73
>AK063449:Os03g0759500 | Length = 524 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/57 (35%), Positives = 23/57 (40%) Frame = +3 Query: 282 RRTPNGAASVSPWPPPCQGCSPSLASPTRSAWCTRLWAPRHHHMYAHYTSEGMDGSS 452 RRT +AS SP P P SP + P S PR + A DGSS Sbjct: 8 RRTTRSSASASPSPAPASPTSPPKSRPKPS--------PRRQLLAAAAAPPKEDGSS 56
>Os05g0496400:Os05g0496400 | Length = 409 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 397 GAHKRVHQADLVGDARLGEQP-WHGGGHGLTLAAPFG 290 GA+ R+ LVGDAR G+ +H GHGL L G Sbjct: 60 GANIRLELERLVGDARPGDTLFFHYSGHGLQLPIETG 96
>AK109854:Os07g0181100 | Length = 624 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +2 Query: 146 RPPAV----HPRVTTHALLPPLLGQGDHLCALLLPFVQPASSSAWRPTRSSDSKRCRKCE 313 RPP++ HP VT+ A LPPL H C V + + P S DS +K Sbjct: 36 RPPSLRPLRHPNVTSLAPLPPL-----HRC------VPRQTEVIFPPLDSPDSSELKKVM 84 Query: 314 SMASP 328 S++ P Sbjct: 85 SISLP 89
>AK099615:Os04g0636000 | Length = 717 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 111 AATNPIQRRPMREGRSPPENRCVSMGKN 28 AA +P +RP R+G +PPE + +G N Sbjct: 11 AARSPPPKRPRRDGDAPPEPQPARVGLN 38
>AK067886:Os01g0924900 | Length = 509 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = -1 Query: 211 PLPKQRWK---KGVGSDARVHGRWPQWLRRRPEARPGSDKPYPEATDARRPVSSRKQMCQ 41 P PK+ K +G G + + GR + R++ EA +KP P RP RK + + Sbjct: 17 PPPKEEAKAEKEGEGEEPQSGGR-KRGRRKKGEAEKEKEKPPPATPTIERPSRERKTVER 75 Query: 40 HGKESP 23 + + +P Sbjct: 76 YSELAP 81
>AK065639:Os04g0636000 | Length = 717 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 111 AATNPIQRRPMREGRSPPENRCVSMGKN 28 AA +P +RP R+G +PPE + +G N Sbjct: 11 AARSPPPKRPRRDGDAPPEPQPARVGLN 38 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,519,621 Number of extensions: 749357 Number of successful extensions: 2937 Number of sequences better than 10.0: 33 Number of HSP's gapped: 2924 Number of HSP's successfully gapped: 33 Length of query: 290 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 190 Effective length of database: 11,395,755 Effective search space: 2165193450 Effective search space used: 2165193450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
