ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf135f16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P40857:PHS1_YEAST Protein PHS1 - Saccharomyces cerevisiae (Baker... 112 4e-24
2O14346:YNQF_SCHPO Uncharacterized protein C19C2.15c - Schizosacc... 92 4e-18

>P40857:PHS1_YEAST Protein PHS1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 217
 Score =  112 bits (279), Expect = 4e-24
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
 Frame = +2

Query: 293 AYLAAYNWAVFFGWAQVLYFAVEALLRSGHESVYAAVEKPLQLAQTAAVLEILHGLVGLV 472
           ++L  YN     GW+ +LY  +    + G  + +   +    L Q  A++EI++  +G+V
Sbjct: 10  SFLPLYNLLSAVGWSYLLYLVISLYPKVGQPAFFYQTKNVATLVQCGAIIEIINSFLGVV 69

Query: 473 RSPVSATLPQIGSRLFVTWGILWSFPETR--THXXXXXXXXXXXXTEIIRYSFFGTKELF 646
           RSP+  T+ Q+ SRL V  GI    P T                 TEI+RY ++    +F
Sbjct: 70  RSPLLTTVAQVSSRLLVVLGIFQLLPNTSGVQSVVYISLLLAWSITEIVRYLYYFFMLVF 129

Query: 647 -GSAPSSLLWLRYSSFLVMYPTGISSEVGLIYIALQFIKASEKYCVRMPNKWNYSFDYFY 823
              AP  L+ LRY+ F ++YPTG++SE+ +IY AL   ++             YS  Y  
Sbjct: 130 KNGAPKILILLRYNLFWILYPTGVASELRIIYCALNAAES------------QYSLLYKR 177

Query: 824 ASILVLLVYVPGSPHMYTYMLGQRKKALAKSKTA 925
             I  +L Y+PG P ++ +M+ QRKK +   +++
Sbjct: 178 ILIAAMLAYIPGFPMLFLHMVAQRKKVMKSLRSS 211



to top

>O14346:YNQF_SCHPO Uncharacterized protein C19C2.15c - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 208

 Score = 92.0 bits (227), Expect = 4e-18
 Identities = 69/218 (31%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
 Frame = +2

Query: 284 VKRAYLAAYNWAVFFGWAQVLYFAVEALLRSG--------HESVYAAVEKPLQLAQTAAV 439
           +K  YL  YN    F W  VL       LR+G           V+      ++  QT A+
Sbjct: 5   LKIQYLKLYNVISCFLWMSVL-------LRTGLIWGITKDTAVVFHETNTLVRWVQTLAI 57

Query: 440 LEILHGLVGLVRSPVSATLPQIGSRLFVTWGILWSFPET-RTHXXXXXXXXXXXXTEIIR 616
            E+ H + GLV S    T+ Q+ SRL++ WG+ + F                   TEIIR
Sbjct: 58  AEVFHSIFGLVSSSPLTTIIQVASRLYLVWGVCYPFSYVIEGSPIYLSMIIAWSITEIIR 117

Query: 617 YSFFGTKELFGSAPSSLLWLRYSSFLVMYPTGISSEVGLIY---IALQFIKASEKYCVRM 787
           Y+F+    L G  P+ L WLRY++FL++YP G  SE  L+    IA Q++ +  K     
Sbjct: 118 YAFYAF-NLNGDIPAFLTWLRYNTFLILYPIGAGSEFLLVLKSRIAAQYVWSLNKLL--- 173

Query: 788 PNKWNYSFDYFYASILVLLVYVPGSPHMYTYMLGQRKK 901
              W           +++ +Y PG   MYT+ML QR+K
Sbjct: 174 ---WP----------ILMSIYPPGLYIMYTHMLAQRRK 198


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 174,544,058
Number of extensions: 3699684
Number of successful extensions: 9883
Number of sequences better than 10.0: 2
Number of HSP's gapped: 9876
Number of HSP's successfully gapped: 2
Length of query: 373
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 258
Effective length of database: 69,142,514
Effective search space: 17838768612
Effective search space used: 17838768612
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top