ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf135d22 |
|---|---|
| Clone Library Name | barley_pub |
>AK121008:Os02g0475400 | Length = 423 Score = 33.9 bits (76), Expect = 0.064 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Frame = -2 Query: 184 TPPSADTPAPS-WRRPRTRAEARSCSGSC-----WPRRSAFSWL 71 +PP+ +PA WRRPR A CS WPRR +WL Sbjct: 38 SPPAPASPAALLWRRPRRVAPTTFCSAPSLGRVGWPRREGAAWL 81
>AK102651:Os03g0197300 | Length = 601 Score = 32.0 bits (71), Expect = 0.24 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = +3 Query: 3 QSRRSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRHD 155 + RR + EE R Q+++ ++ +E+ ERR + E E + + RR + Sbjct: 486 EERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREKEEKKRREE 536
>Os03g0818800:Os03g0818800 | Length = 465 Score = 30.4 bits (67), Expect = 0.71 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 181 PPSADTPAPSWRRPRTRAE 125 PP+A +PAP+W+ PR AE Sbjct: 76 PPAAPSPAPAWQPPRRAAE 94
>AK109301:Os01g0243300 | Length = 101 Score = 30.4 bits (67), Expect = 0.71 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Frame = +3 Query: 3 QSRRSIQTREEVNREQQQQPRK--------GSQEKAERRGQHEPEHDRASARVRGRRHDG 158 ++R SI ++E V E+ + R QE+ R +H P R R R RRH G Sbjct: 15 KNRGSIASQEMVGAERGRGKRNLDEVDQADEPQERRPERRRHPPRPRRGGGRSRRRRHGG 74 Query: 159 AG 164 G Sbjct: 75 NG 76
>AF017357: | Length = 168 Score = 29.6 bits (65), Expect = 1.2 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -2 Query: 184 TPPSADTPAPSWRRPRTRAEARSCSGSCWPRRS 86 +P + TP+PS P+ + A + G+CW R+ Sbjct: 66 SPGTTPTPSPSAAAPKAKPAANTNCGTCWRSRA 98
>AK119859: | Length = 727 Score = 29.3 bits (64), Expect = 1.6 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +3 Query: 3 QSRRSIQTREEVNREQQQQPRKGSQEKAERRGQHEPE----HDRASARVRGRR 149 + RR Q EE+ RE +GS+ + ERR PE DR AR R RR Sbjct: 276 RERRLKQEEEELARE------RGSRYRGERRRSRTPERERSRDRRHARDRSRR 322 Score = 27.7 bits (60), Expect = 4.6 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = +3 Query: 3 QSRRSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRHD 155 + R + R REQ++ K Q + ERR + E D+A R + + Sbjct: 188 EERAKKEERRRREREQEEAREKERQAEKERRRKEREERDKAEDERRRKERE 238
>AK119779:Os12g0506500 | Length = 461 Score = 29.3 bits (64), Expect = 1.6 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -3 Query: 216 GEPGADALRAGHHRLLIRQHRH----GGAHAPEQKPGRVPVHAGPAAR 85 GE A A+ A +HR H GGAHA E++ R P A P R Sbjct: 21 GEAKASAVPACYHRPSAGSCHHACKYGGAHAFEERESRRPAAAQPRPR 68
>AK064916:Os07g0529600 | Length = 402 Score = 29.3 bits (64), Expect = 1.6 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Frame = -3 Query: 288 LHPPFLQKSEGEEAFLDAEGAD----EDGEPGADALRAGHHRLLIRQHRHGGAHAPEQKP 121 + PPFL ++ A D D E G PGA+ R Q GG AP P Sbjct: 329 ISPPFLDLNKFVVAGPDVRSHDDLRPEGGAPGAEGARPAERHRRHDQEGGGGGGAPGADP 388 Query: 120 G 118 G Sbjct: 389 G 389
>Os08g0376600:Os08g0376600 | Length = 387 Score = 28.9 bits (63), Expect = 2.1 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = -3 Query: 264 SEGEEAFLDAEGADEDGEPGAD--ALRAGHHRLLIRQHRHGGAHAPEQKPGRVPVHAGPA 91 S G +A L G D P + A+ AG R L+ H HG AH +P V V A A Sbjct: 159 SVGLDALLYHGGTDAPLLPWPERAAVAAGAARGLVHLHAHGVAHG-RVRPRNVLVDAAAA 217 Query: 90 AR 85 AR Sbjct: 218 AR 219
>AK111466:Os01g0578800 | Length = 205 Score = 28.9 bits (63), Expect = 2.1 Identities = 16/55 (29%), Positives = 20/55 (36%) Frame = -2 Query: 193 ACWTPPSADTPAPSWRRPRTRAEARSCSGSCWPRRSAFSWLPFLGCCCCSRLTSS 29 +C PP+ P S P R S SC RR CCC + S+ Sbjct: 100 SCLAPPTGSWPTCSAPAPPIRTPPAGASSSCTRRRRP-------ACCCAAEAMST 147
>AK103197:Os05g0170600 | Length = 115 Score = 28.9 bits (63), Expect = 2.1 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = +3 Query: 33 EVNREQQQQPR------KGSQEKAERRGQHEPEHDRASARVRGRRHDGAGVSADGG 182 E ++QQ++PR G+ + GQH + R +A R R G G D G Sbjct: 40 EQQQQQQRRPRPPPGSKNGASPSSSAHGQHWKDQSRHAAFTRRRFGTGTGGGGDDG 95
>AK105980:Os02g0639800 | Length = 286 Score = 28.5 bits (62), Expect = 2.7 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 199 CTACWTPPSADTPAPSWRRPRTRAEARSCSGSCWPRR 89 C C S DT P + R R + R+ SGS PRR Sbjct: 100 CPVCKAAVSPDTLVPLYGRGRGGSSKRARSGSAIPRR 136
>AK072763:Os04g0441700 | Length = 269 Score = 28.5 bits (62), Expect = 2.7 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -3 Query: 249 AFLDAEGADEDGEPGADALRAGHHRLLIRQ--HRHGGAH 139 A ++AEG GE + L AG RLL+ + HGG H Sbjct: 20 AEVEAEGVGAVGERREEGLHAGAARLLVEELDEPHGGEH 58
>AK071904:Os02g0639800 | Length = 286 Score = 28.5 bits (62), Expect = 2.7 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 199 CTACWTPPSADTPAPSWRRPRTRAEARSCSGSCWPRR 89 C C S DT P + R R + R+ SGS PRR Sbjct: 100 CPVCKAAVSPDTLVPLYGRGRGGSSKRARSGSAIPRR 136
>AK070367:Os02g0639800 | Length = 146 Score = 28.5 bits (62), Expect = 2.7 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 199 CTACWTPPSADTPAPSWRRPRTRAEARSCSGSCWPRR 89 C C S DT P + R R + R+ SGS PRR Sbjct: 100 CPVCKAAVSPDTLVPLYGRGRGGSSKRARSGSAIPRR 136
>Os01g0640700:Os01g0640700 | Length = 400 Score = 28.1 bits (61), Expect = 3.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 184 TPPSADTPAPSWRRPRTRAEARSCSGSCWPR 92 TPPS TPAP+ P A+S SG P+ Sbjct: 171 TPPSPLTPAPATTAPAPTPTAKSKSGQNTPK 201
>AK119848: | Length = 555 Score = 28.1 bits (61), Expect = 3.5 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = +3 Query: 21 QTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRHD 155 ++R R + + R ++++ RG+H R+ +R RGRRH+ Sbjct: 143 KSRSRSRRRDRSRSRSRRRDRSRSRGRHS----RSRSRGRGRRHN 183
>AK120460:Os03g0777700 | Length = 816 Score = 28.1 bits (61), Expect = 3.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 42 REQQQQPRKGSQEKAERRGQHEPEHDRASARV 137 R QQQ P + +++K R+G EPE RV Sbjct: 670 RRQQQSPLQSNKKKKGRQGLPEPEEAEVPLRV 701
>AK105528:Os03g0777700 | Length = 186 Score = 28.1 bits (61), Expect = 3.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 42 REQQQQPRKGSQEKAERRGQHEPEHDRASARV 137 R QQQ P + +++K R+G EPE RV Sbjct: 40 RRQQQSPLQSNKKKKGRQGLPEPEEAEVPLRV 71
>AK099977:Os01g0148400 | Length = 626 Score = 28.1 bits (61), Expect = 3.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 2 AESQKHPNKRRGQSRAAAAAEEGKPREGRAAGPA*TGTRPG 124 A++ + NKRR S A E K R A G + +G+R G Sbjct: 18 ADATRAANKRRAPSPAGGGGVEAKRRRKDAMGSSVSGSRSG 58
>Os11g0591800:Os11g0591800 | Length = 158 Score = 27.7 bits (60), Expect = 4.6 Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 103 MNRNTTGLLLGCVG--AAMTVLAYQQ 174 M R GLLLGCVG A M V A QQ Sbjct: 3 MGRKIMGLLLGCVGLVAVMHVAAAQQ 28
>AK070113:Os07g0165500 | Length = 369 Score = 27.7 bits (60), Expect = 4.6 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -2 Query: 181 PPSADTPAPSWRRPRTRAEARSCSGSCWPRR 89 PP +D+ RRPR RA A SC S PRR Sbjct: 211 PPLSDSQRRVPRRPRLRAAAASCPSSP-PRR 240
>AK063489:Os01g0357400 | Length = 348 Score = 27.7 bits (60), Expect = 4.6 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = -2 Query: 193 ACWT--PPSADTPAPSWRRPRTRAEARSCSGSC--WPR 92 A WT PP A + S RRP A +C G C W R Sbjct: 59 ARWTTSPPPASPTSGSLRRPTLSASKATCWGGCTIWTR 96
>Os11g0500100:Os11g0500100 | Length = 683 Score = 27.3 bits (59), Expect = 6.0 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 10/67 (14%) Frame = -3 Query: 264 SEGEE-AFLDAEGADEDGEPGADALRAGHHRLLIRQH---------RHGGAHAPEQKPGR 115 ++GE+ A L AEG +G ++AGHHR+ + H RHG P Sbjct: 35 ADGEDLAGLHAEGLHVEG------IQAGHHRVELEGHVEALCFFHERHGRLGNP-SSAAS 87 Query: 114 VPVHAGP 94 V V AGP Sbjct: 88 VSVEAGP 94
>X56063:Os06g0726200 | Length = 199 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 110 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 144
>AY378172:Os06g0726200 | Length = 195 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 106 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 140
>Z29961:Os06g0726200 | Length = 214 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 125 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 159
>L27208:Os02g0662000 | Length = 133 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -2 Query: 196 TACWTPPSADTPAPSWRRPRTRAEARSCSGSC 101 +AC PS TP PS P T S G C Sbjct: 21 SACGGSPSCPTPTPSTPTPSTPTPTPSAFGRC 52
>AK122062:Os01g0177100 | Length = 900 Score = 27.3 bits (59), Expect = 6.0 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +3 Query: 3 QSRRSIQTREEV--NREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRHDGAGVSAD 176 QS + IQ ++ + QQQQ ++ Q+ ++R Q + + S+ + H+G VSAD Sbjct: 131 QSSQQIQMQQLLLQRHAQQQQQQQSQQQPQQQRRQQKQQQRSESSHLPTSAHNGL-VSAD 189
>AK121458:Os01g0226600 | Length = 628 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 12 RSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASA 131 + I T R+QQQQ Q+ +RR EPE D A+A Sbjct: 144 KQITTHLRGGRQQQQQ-----QQPEQRRQDEEPEDDDAAA 178
>AK110680:Os05g0113200 | Length = 104 Score = 27.3 bits (59), Expect = 6.0 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -2 Query: 187 WTPPSADTPAPSWRRPRTRAEARSCSG 107 W P D P P+WRR R R C G Sbjct: 76 WRRPFRDLPKPAWRR-RRRHRGGRCQG 101
>AK109149:Os02g0662000 | Length = 133 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -2 Query: 196 TACWTPPSADTPAPSWRRPRTRAEARSCSGSC 101 +AC PS TP PS P T S G C Sbjct: 21 SACGGSPSCPTPTPSTPTPSTPTPTPSAFGRC 52
>AK105798:Os06g0726200 | Length = 214 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 125 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 159
>AK104020:Os06g0726200 | Length = 214 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 125 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 159
>AK103638:Os08g0558700 | Length = 234 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 9 RRSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRH 152 RRS + REE E++++ + S+ K RR + E + R + R +RH Sbjct: 174 RRSKRGREERGGEKERKRERHSEGKERRRDKQE-KRSRHESDDRSKRH 220
>AK099339:Os06g0726200 | Length = 214 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 125 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 159
>AK072687:Os01g0177100 | Length = 875 Score = 27.3 bits (59), Expect = 6.0 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +3 Query: 3 QSRRSIQTREEV--NREQQQQPRKGSQEKAERRGQHEPEHDRASARVRGRRHDGAGVSAD 176 QS + IQ ++ + QQQQ ++ Q+ ++R Q + + S+ + H+G VSAD Sbjct: 106 QSSQQIQMQQLLLQRHAQQQQQQQSQQQPQQQRRQQKQQQRSESSHLPTSAHNGL-VSAD 164
>AK071766:Os02g0678400 | Length = 203 Score = 27.3 bits (59), Expect = 6.0 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -2 Query: 178 PSADTPAPSWRRPRTRAEARSCSGSCWPRRSAFSWLP 68 PSA T A R P + A A SCS S PR ++ S P Sbjct: 135 PSAPTSAARLRSPTSAAPAASCS-STTPRAASSSTTP 170
>AK069571:Os01g0226600 | Length = 666 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 12 RSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRASA 131 + I T R+QQQQ Q+ +RR EPE D A+A Sbjct: 144 KQITTHLRGGRQQQQQ-----QQPEQRRQDEEPEDDDAAA 178
>AK061042:Os06g0726200 | Length = 214 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -2 Query: 184 TPPSADTPAP-SWRRPRTRAEARSCSGSCWPRRSA 83 TPP A +P SWRR RTR A P R A Sbjct: 125 TPPPASARSPRSWRRRRTRPRAGGRRRPMAPTRGA 159
>AK060040:Os01g0708300 | Length = 292 Score = 27.3 bits (59), Expect = 6.0 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 118 TGLLLGCVGAAMTVLAYQQTVVSSTQCI-GAGLAVLVCALCIKEGFF 255 +G L+ GAA+ + A Q VS Q I G GLA+ LC+ F+ Sbjct: 50 SGFLMDMCGAALMLTALSQAPVSVVQPIAGCGLAI----LCVFSHFY 92
>AK110134: | Length = 944 Score = 26.9 bits (58), Expect = 7.9 Identities = 11/41 (26%), Positives = 26/41 (63%) Frame = +3 Query: 6 SRRSIQTREEVNREQQQQPRKGSQEKAERRGQHEPEHDRAS 128 +R + Q +++ ++QQQQ ++ Q++ +++ QH + AS Sbjct: 66 ARHTPQQQQQQQQQQQQQQQQQQQQQQQQQQQHPQQPQWAS 106
>AK109030:Os11g0160400 | Length = 316 Score = 26.9 bits (58), Expect = 7.9 Identities = 16/58 (27%), Positives = 24/58 (41%) Frame = -3 Query: 282 PPFLQKSEGEEAFLDAEGADEDGEPGADALRAGHHRLLIRQHRHGGAHAPEQKPGRVP 109 PP L++ G ++ DE+ P HH + +H G HAP +P P Sbjct: 87 PPPLKEESGSGHVKKSKHKDEERAPPPKK----HHEKAPPKSKHHGRHAPPDQPELSP 140
>AK108265:Os03g0114100 | Length = 108 Score = 26.9 bits (58), Expect = 7.9 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = -2 Query: 187 WTPPSADTPAPSWRRPRTRAEARSCSG--SCWPRRSA 83 W PPSA P+ S RPR R +RS + S PR S+ Sbjct: 10 WRPPSA--PSTSASRPRRRPSSRSSTSRPSAAPRWSS 44
>AK064981:Os01g0953100 | Length = 741 Score = 26.9 bits (58), Expect = 7.9 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 35 GQSRAAAAAEEGKPREGRAAG 97 GQSRAAAAA + + R G+ AG Sbjct: 12 GQSRAAAAAADDERRGGQMAG 32 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,508,132 Number of extensions: 356207 Number of successful extensions: 2098 Number of sequences better than 10.0: 45 Number of HSP's gapped: 2087 Number of HSP's successfully gapped: 46 Length of query: 173 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 79 Effective length of database: 11,636,001 Effective search space: 919244079 Effective search space used: 919244079 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
