ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf137p04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q96SZ5:CJ022_HUMAN Uncharacterized protein C10orf22 - Homo sapie... 97 2e-19
2Q6PDY2:CJ022_MOUSE Uncharacterized protein C10orf22 homolog - Mu... 95 1e-18
3P36957:ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferas... 34 1.6
4P57074:SOX8_CHICK Transcription factor SOX-8 - Gallus gallus (Ch... 32 5.9

>Q96SZ5:CJ022_HUMAN Uncharacterized protein C10orf22 - Homo sapiens (Human)|
          Length = 270
 Score = 97.1 bits (240), Expect = 2e-19
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
 Frame = +1

Query: 451  DACKVSFSPDGPISEETLERVRALLDEIRPLDLGLDNEAQIARNWNSSTXXXXXXXXXXX 630
            DA     +P  P   E L ++++LL ++R  DL +       +    +            
Sbjct: 34   DAASGPEAPMQPGFPENLSKLKSLLTQLRAEDLNIAPRKATLQPLPPNL----------- 82

Query: 631  XXXYAPSIKYLHIHECESFSMGIFCMPPSSVIPLHNHPGMTVLSKLLYGKLHAESYDWID 810
                 P + Y+HI+E + FS+G+F +   + IPLH+HPGM  + K+LYG +     D +D
Sbjct: 83   -----PPVTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLD 137

Query: 811  V-------ADPTD-----PLKPRPARCVRDREM-------TAPETTILYPDRGGNIHTFR 933
                    A P +     PL+PR    VR   +        A    IL P R  N+H   
Sbjct: 138  AGGGQRPRALPPEQQFEPPLQPREREAVRPGVLRSRAEYTEASGPCILTPHR-DNLHQID 196

Query: 934  AIT-PCALFDVLSPPYSAENGRDCSYFRKSPVKEPSVVLPSEIDSSEVVWLEE 1089
            A+  P A  D+L+PPY  ++GRDC Y+R      P     S  D    VWL E
Sbjct: 197  AVEGPAAFLDILAPPYDPDDGRDCHYYRVLEPVRPKEASSSACDLPREVWLLE 249



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>Q6PDY2:CJ022_MOUSE Uncharacterized protein C10orf22 homolog - Mus musculus (Mouse)|
          Length = 256

 Score = 94.7 bits (234), Expect = 1e-18
 Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
 Frame = +1

Query: 646  PSIKYLHIHECESFSMGIFCMPPSSVIPLHNHPGMTVLSKLLYGKLHAESYDWIDVA--- 816
            P + Y+HI+E E FS+G+F +   + IPLH+HPGM  + K+LYG +     D +D     
Sbjct: 71   PPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLDTGAGH 130

Query: 817  --DPTD-----PLKPRPARCVRDREM-------TAPETTILYPDRGGNIHTFRAIT-PCA 951
               P +     PL+P     VR   +        A    +L P R  N+H   A+  P A
Sbjct: 131  RRPPPEQQFEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAA 189

Query: 952  LFDVLSPPYSAENGRDCSYFRKSPVKEPSVVLPSEIDSSEVVWLEE 1089
              D+L+PPY  E+GRDC Y+R      P     S  D    VWL E
Sbjct: 190  FLDILAPPYDPEDGRDCHYYRVVEPIRPKEASGSACDLPREVWLLE 235



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>P36957:ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of|
            2-oxoglutarate dehydrogenase complex, mitochondrial
            precursor - Homo sapiens (Human)
          Length = 453

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 1117 SPLEADGPPIP-PTRLPQSYLFHSAKQQMAPSLVTSGSMNSLSHSQRNKVEKGRQRV 950
            +P+    PP+P P++ P      + K  +AP L  +G+   L    R K+ + RQR+
Sbjct: 178  APIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLADAGAGKGLRSEHREKMNRMRQRI 234



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>P57074:SOX8_CHICK Transcription factor SOX-8 - Gallus gallus (Chicken)|
          Length = 470

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -1

Query: 1099 GPPIPPTRLPQSYLFHSAKQQMAPSLVTSGSMNSLSHSQRNKVEKGRQRV 950
            GPP PPT  P++ L H +KQ+             L H  R  VE GRQ +
Sbjct: 232  GPPTPPTT-PKTDLHHGSKQE-------------LKHEGRRLVESGRQNI 267


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 272,937,387
Number of extensions: 6011475
Number of successful extensions: 14664
Number of sequences better than 10.0: 4
Number of HSP's gapped: 14658
Number of HSP's successfully gapped: 4
Length of query: 543
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 425
Effective length of database: 68,319,629
Effective search space: 29035842325
Effective search space used: 29035842325
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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