ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf130h24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073748:Os05g0345400 | 737 | 0.0 | 2 | AK102482:Os05g0345400 | 586 | e-167 | 3 | AK108528: | 32 | 1.0 | 4 | AK071909:Os01g0665300 | 31 | 3.0 | 5 | AK066990:Os01g0665300 | 31 | 3.0 | 6 | AK106610:Os09g0571500 | 30 | 6.8 | 7 | AK071951:Os09g0571500 | 30 | 6.8 |
|---|
>AK073748:Os05g0345400 | Length = 1016 Score = 737 bits (1903), Expect = 0.0 Identities = 364/492 (73%), Positives = 405/492 (82%) Frame = +1 Query: 1 VWQYKISLVHLYSYLGALPLAHRWYVSLEVKNILLESVSHHILPQMLSSPFLEQTASLVK 180 VWQYK+ LVHLYSYLGALPLAHRWYV+LEVKNILLES SHHILPQML+SP L+QTA LVK Sbjct: 507 VWQYKVMLVHLYSYLGALPLAHRWYVTLEVKNILLESASHHILPQMLNSPLLQQTADLVK 566 Query: 181 DYLRFMDDHLKESADLTCLAYRHRTYSKVIEFVQFKNRLQCSMQYLAVKSDSVIXXXXXX 360 DYL+FMDDHLKESADLTCLAYRHRTYSKVIEFVQFK RLQ SMQYL+V+SDS+I Sbjct: 567 DYLKFMDDHLKESADLTCLAYRHRTYSKVIEFVQFKERLQHSMQYLSVRSDSIILSLKQK 626 Query: 361 XXXXXXXXXXXXNVNHGGGLVDLSNEDNMKHLTFNEDLEARPWWTPTTSVNFLSEPIDES 540 NVNHG LV+LSNEDN+K TFNEDL+ARPWWTPTTSVNFLSEP DE Sbjct: 627 AESLDEVESILENVNHGARLVELSNEDNVKRFTFNEDLQARPWWTPTTSVNFLSEPFDEG 686 Query: 541 STPACFRAKVCKHKSTEKDGPKMGDAERKCLVPRLVYLSMRGCVSSLRETEHNGSVSDIT 720 STPACFRAK C+HKSTEKD K+ AERK L+PRLVYLSM GC SSLRET+ NGS D Sbjct: 687 STPACFRAKACEHKSTEKDDSKIKYAERKALLPRLVYLSMHGCASSLRETQLNGSGLDTD 746 Query: 721 VGEMKTLLEKYARTIGYSMDDALSMILGISSGKKSMKDFAPDIVSWMSFAVFINAMNLWS 900 EMK LL KYAR+IGYS+DDALS+ILG+SSGKKS+KDF PDIVSWMSFAVFINA NLWS Sbjct: 747 ATEMKPLLLKYARSIGYSIDDALSVILGMSSGKKSVKDFTPDIVSWMSFAVFINAWNLWS 806 Query: 901 NESVIPRTEPSSPSSWEIVDSLVKLCIEEHLTDANRILTCPGNKIPLLVQMVTEPISWHL 1080 NESV+PR + SSPSSW+IVDSLVK+C+EE L DANRILT PGN IP+LVQM+TEPISWHL Sbjct: 807 NESVVPRADESSPSSWQIVDSLVKICVEEQLIDANRILTSPGNNIPVLVQMITEPISWHL 866 Query: 1081 IIIQSCTRVVAPQGXXXXXSGPSLRTNMPQLQGIQRSVQCLIETLQSVQKWLSDQMSPEE 1260 ++IQSC R +APQG GPS R N+P+LQ IQRSVQC+I+TL+SVQ WLSDQM PEE Sbjct: 867 VVIQSCVRSMAPQGKKKKKGGPSERPNVPRLQAIQRSVQCMIDTLRSVQSWLSDQMRPEE 926 Query: 1261 QGLDILLSYFQGTGDEGPGQTFRVLEEKPAAHASELGDRIAQSLEAWSSTSVVRRIVGAE 1440 Q LDILLSY QG ++GPGQ +LEE A H ELG+RIAQSLE WSS VVRRIVGAE Sbjct: 927 QALDILLSYLQGGNEDGPGQISCILEENSARHNPELGERIAQSLETWSSAGVVRRIVGAE 986 Query: 1441 HEVLAEFKKMVD 1476 E+L E KK+ D Sbjct: 987 KELLVELKKICD 998
>AK102482:Os05g0345400 | Length = 879 Score = 586 bits (1511), Expect = e-167 Identities = 286/373 (76%), Positives = 316/373 (84%) Frame = +1 Query: 1 VWQYKISLVHLYSYLGALPLAHRWYVSLEVKNILLESVSHHILPQMLSSPFLEQTASLVK 180 VWQYK+ LVHLYSYLGALPLAHRWYV+LEVKNILLES SHHILPQML+SP L+QTA LVK Sbjct: 507 VWQYKVMLVHLYSYLGALPLAHRWYVTLEVKNILLESASHHILPQMLNSPLLQQTADLVK 566 Query: 181 DYLRFMDDHLKESADLTCLAYRHRTYSKVIEFVQFKNRLQCSMQYLAVKSDSVIXXXXXX 360 DYL+FMDDHLKESADLTCLAYRHRTYSKVIEFVQFK RLQ SMQYL+V+SDS+I Sbjct: 567 DYLKFMDDHLKESADLTCLAYRHRTYSKVIEFVQFKERLQHSMQYLSVRSDSIILSLKQK 626 Query: 361 XXXXXXXXXXXXNVNHGGGLVDLSNEDNMKHLTFNEDLEARPWWTPTTSVNFLSEPIDES 540 NVNHG LV+LSNEDN+K TFNEDL+ARPWWTPTTSVNFLSEP DE Sbjct: 627 AESLDEVESILENVNHGARLVELSNEDNVKRFTFNEDLQARPWWTPTTSVNFLSEPFDEG 686 Query: 541 STPACFRAKVCKHKSTEKDGPKMGDAERKCLVPRLVYLSMRGCVSSLRETEHNGSVSDIT 720 STPACFRAK C+HKSTEKD K+ AERK L+PRLVYLSM GC SSLRET+ NGS D Sbjct: 687 STPACFRAKACEHKSTEKDDSKIKYAERKALLPRLVYLSMHGCASSLRETQLNGSGLDTD 746 Query: 721 VGEMKTLLEKYARTIGYSMDDALSMILGISSGKKSMKDFAPDIVSWMSFAVFINAMNLWS 900 EMK LL KYAR+IGYS+DDALS+ILG+SSGKKS+KDF PDIVSWMSFAVFINA NLWS Sbjct: 747 ATEMKPLLLKYARSIGYSIDDALSVILGMSSGKKSVKDFTPDIVSWMSFAVFINAWNLWS 806 Query: 901 NESVIPRTEPSSPSSWEIVDSLVKLCIEEHLTDANRILTCPGNKIPLLVQMVTEPISWHL 1080 NESV+PR + SSPSSW+IVDSLVK+C+EE L DANRILT PGN IP+LVQM+TEPISWHL Sbjct: 807 NESVVPRADESSPSSWQIVDSLVKICVEEQLIDANRILTSPGNNIPVLVQMITEPISWHL 866 Query: 1081 IIIQSCTRVVAPQ 1119 ++IQSC R +APQ Sbjct: 867 VVIQSCVRSMAPQ 879
>AK108528: | Length = 381 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 1018 KSGFDWHQSGAPLCKVSPSCPQSPKNLGCSVQFWGSLIHLTT 893 +S F+ +SGAP C + S P +G S WG+ + LT+ Sbjct: 147 RSSFEESESGAPWCAIMKSIPAWAIFIGHSCSNWGTYLFLTS 188
>AK071909:Os01g0665300 | Length = 454 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/67 (31%), Positives = 29/67 (43%) Frame = -2 Query: 1318 VLDLHRQFLGNMTARYPNLAPLDSSDQIAIFGHFGAFQSSTEQIFEFLATEACLFAAMGR 1139 +LD +FLG+ TA Y + P+DS + I G G F + + E C Sbjct: 176 LLDTPSEFLGSFTALYDEVVPIDS--LVNISGRCGVFPLTESTTEASIGNEPCRSEGDML 233 Query: 1138 FSFSSFL 1118 FS S L Sbjct: 234 FSNSEVL 240
>AK066990:Os01g0665300 | Length = 327 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/67 (31%), Positives = 29/67 (43%) Frame = -2 Query: 1318 VLDLHRQFLGNMTARYPNLAPLDSSDQIAIFGHFGAFQSSTEQIFEFLATEACLFAAMGR 1139 +LD +FLG+ TA Y + P+DS + I G G F + + E C Sbjct: 49 LLDTPSEFLGSFTALYDEVVPIDS--LVNISGRCGVFPLTESTTEASIGNEPCRSEGDML 106 Query: 1138 FSFSSFL 1118 FS S L Sbjct: 107 FSNSEVL 113
>AK106610:Os09g0571500 | Length = 382 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Frame = +1 Query: 721 VGEMKTLLEKYA----RTIGYSMDDALSMILGISSGKKSMKD--FAPDIVSWMSF 867 +G ++ LEK+ R +G+S+ A + +L I KKS ++ F+PD++S + + Sbjct: 134 LGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGY 188
>AK071951:Os09g0571500 | Length = 518 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Frame = +1 Query: 721 VGEMKTLLEKYA----RTIGYSMDDALSMILGISSGKKSMKD--FAPDIVSWMSF 867 +G ++ LEK+ R +G+S+ A + +L I KKS ++ F+PD++S + + Sbjct: 270 LGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGY 324 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,779,942 Number of extensions: 1076476 Number of successful extensions: 2841 Number of sequences better than 10.0: 7 Number of HSP's gapped: 2838 Number of HSP's successfully gapped: 7 Length of query: 566 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 460 Effective length of database: 11,155,509 Effective search space: 5131534140 Effective search space used: 5131534140 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
