ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf130h12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 186 bits (94), Expect = 1e-43 Identities = 190/222 (85%) Strand = Plus / Minus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 35093229 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 35093170 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 35093169 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 35093110 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 35093109 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 35093050 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttctagtaagc 248 ||||||| ||||||||| ||||||||||||||| |||||| Sbjct: 35093049 tgttcacgaagccgtccattggcctttgcgcttctcgtaagc 35093008 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 35092740 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 35092681 Query: 605 ttggagacgtcccttggga 623 ||||||| || |||||||| Sbjct: 35092680 ttggagatgttccttggga 35092662 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Minus Query: 624 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 668 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 35092531 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 35092487
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 186 bits (94), Expect = 1e-43 Identities = 190/222 (85%) Strand = Plus / Minus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 153570 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 153511 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 153510 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 153451 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 153450 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 153391 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttctagtaagc 248 ||||||| ||||||||| ||||||||||||||| |||||| Sbjct: 153390 tgttcacgaagccgtccattggcctttgcgcttctcgtaagc 153349 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 153081 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 153022 Query: 605 ttggagacgtcccttggga 623 ||||||| || |||||||| Sbjct: 153021 ttggagatgttccttggga 153003 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Minus Query: 624 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 668 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 152872 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 152828
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 186 bits (94), Expect = 1e-43 Identities = 190/222 (85%) Strand = Plus / Minus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 66392 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 66333 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 66332 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 66273 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 66272 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 66213 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttctagtaagc 248 ||||||| ||||||||| ||||||||||||||| |||||| Sbjct: 66212 tgttcacgaagccgtccattggcctttgcgcttctcgtaagc 66171 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 65903 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 65844 Query: 605 ttggagacgtcccttggga 623 ||||||| || |||||||| Sbjct: 65843 ttggagatgttccttggga 65825 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Minus Query: 624 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 668 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 65694 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 65650
>ref|NM_001055057.1| Oryza sativa (japonica cultivar-group) Os02g0817600 (Os02g0817600) mRNA, complete cds Length = 1297 Score = 180 bits (91), Expect = 7e-42 Identities = 184/215 (85%) Strand = Plus / Plus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 528 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 587 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 588 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 647 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 648 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 707 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttct 241 ||||||| ||||||||| ||||||||||||||| Sbjct: 708 tgttcacgaagccgtccattggcctttgcgcttct 742 Score = 127 bits (64), Expect = 9e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 768 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 827 Query: 605 ttggagacgtcccttgggaaatgtttgttggctccgtgaagaggctaaggatcatgagga 664 ||||||| || ||||||||||||||||| |||| ||||||||| | ||||||||||||| Sbjct: 828 ttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgagga 887 Query: 665 catc 668 |||| Sbjct: 888 catc 891
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 180 bits (91), Expect = 7e-42 Identities = 184/215 (85%) Strand = Plus / Plus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 490 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 549 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 550 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 609 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 610 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 669 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttct 241 ||||||| ||||||||| ||||||||||||||| Sbjct: 670 tgttcacgaagccgtccattggcctttgcgcttct 704 Score = 127 bits (64), Expect = 9e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 730 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 789 Query: 605 ttggagacgtcccttgggaaatgtttgttggctccgtgaagaggctaaggatcatgagga 664 ||||||| || ||||||||||||||||| |||| ||||||||| | ||||||||||||| Sbjct: 790 ttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgagga 849 Query: 665 catc 668 |||| Sbjct: 850 catc 853
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 180 bits (91), Expect = 7e-42 Identities = 184/215 (85%) Strand = Plus / Plus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 495 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 554 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 555 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 614 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 615 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 674 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttct 241 ||||||| ||||||||| ||||||||||||||| Sbjct: 675 tgttcacgaagccgtccattggcctttgcgcttct 709 Score = 127 bits (64), Expect = 9e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 735 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 794 Query: 605 ttggagacgtcccttgggaaatgtttgttggctccgtgaagaggctaaggatcatgagga 664 ||||||| || ||||||||||||||||| |||| ||||||||| | ||||||||||||| Sbjct: 795 ttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgagga 854 Query: 665 catc 668 |||| Sbjct: 855 catc 858
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 180 bits (91), Expect = 7e-42 Identities = 184/215 (85%) Strand = Plus / Plus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 529 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 588 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 589 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 648 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||||||||| ||||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 649 ggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactca 708 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttct 241 ||||||| ||||||||| ||||||||||||||| Sbjct: 709 tgttcacgaagccgtccattggcctttgcgcttct 743 Score = 127 bits (64), Expect = 9e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 769 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 828 Query: 605 ttggagacgtcccttgggaaatgtttgttggctccgtgaagaggctaaggatcatgagga 664 ||||||| || ||||||||||||||||| |||| ||||||||| | ||||||||||||| Sbjct: 829 ttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgagga 888 Query: 665 catc 668 |||| Sbjct: 889 catc 892
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 127 bits (64), Expect = 9e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 545 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 604 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 636 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 695 Query: 605 ttggagacgtcccttgggaaatgtttgttggctccgtgaagaggctaaggatcatgagga 664 ||||||| || ||||||||||||||||| |||| ||||||||| | ||||||||||||| Sbjct: 696 ttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgagga 755 Query: 665 catc 668 |||| Sbjct: 756 catc 759 Score = 125 bits (63), Expect = 4e-25 Identities = 176/215 (81%), Gaps = 9/215 (4%) Strand = Plus / Plus Query: 27 ccgaaaccaagaaggccgccgccgatgactctggctcgcagaaagacaaggaggagggcg 86 |||| ||||||||| ||||| || |||| |||| |||||| |||||||||||||||| Sbjct: 405 ccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcg 464 Query: 87 agaagaagggccgggtgccagggtgggtgaaggtgaacatggatggggaggtcattggga 146 | ||||| || ||||| | || ||||||||||||||||||||||| ||||||||||| | Sbjct: 465 aaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaa 524 Query: 147 ggaaggtggacctcaacgcccaccgctcgtacaagacccttgccttggcccttgagatca 206 |||| ||| || |||||||| |||||||||||||| || |||||||| ||| Sbjct: 525 ggaa---------caatgcgcaccgctcatacaagacccttgcattagcccttgaactca 575 Query: 207 tgttcaccaagccgtccgccggcctttgcgcttct 241 ||||||| ||||||||| ||||||||||||||| Sbjct: 576 tgttcacgaagccgtccattggcctttgcgcttct 610
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 83.8 bits (42), Expect = 1e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||| | |||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 688 tatgaagataaggatggtgactggatgcttgttggtgacgtcccatgggagatgtttgtt 747 Query: 634 gg 635 || Sbjct: 748 gg 749
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 632 gaagacaaggatggagactggatgcttgttggagacgtcccatgggagatgtttgttg 689
>emb|CT830417.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111I24, full insert sequence Length = 1125 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 725 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 783
>ref|NM_001057765.1| Oryza sativa (japonica cultivar-group) Os03g0742900 (Os03g0742900) mRNA, complete cds Length = 1180 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 719 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 777
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 724 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 782
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 719 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 777
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 714 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 772
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| |||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 521 acatatgaagacaaggatggtgactggatgctagttggagatgtaccatgggacatgttt 580 Query: 631 gt 632 || Sbjct: 581 gt 582
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 73.8 bits (37), Expect = 1e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1320 gatggtgattggatgcttgttggagatgtcccttgggaaatgttt 1364
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtccc 617 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 34984 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 35027
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtccc 617 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 3909 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 3952
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtccc 617 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 30280333 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 30280290
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| |||||||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 27148 tatgaagacaaggatggtgactggatgctagttggagatgttccatgggagatgtttgt 27206
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||| |||||| ||||||||||||||||| || || |||||||| |||||||||| Sbjct: 637 gaagacaaggatggagactggatgcttgttggtgatgtaccttgggagatgtttgttg 694
>gb|EF053504.1| Solanum tuberosum auxin/indole-3-acetic acid (IAA2) mRNA, complete cds Length = 642 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||| | |||||| |||||||||||||||||||| || |||||| | ||||||||| Sbjct: 493 tatgaagataaggatggggactggatgcttgttggagatgtaccttggcagatgtttgtt 552 Query: 634 g 634 | Sbjct: 553 g 553
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||||| ||||| ||||||||||| || ||||||||||||||||| |||||| Sbjct: 91 tatgaagacaaagatggagactggatgctagtgggagacgtcccttgggagatgttt 147
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 ||||| |||| ||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 238 tatgaggacaaggatggtgactggatgcttgtcggtgatgtcccatgggagatgtttgtt 297 Query: 634 g 634 | Sbjct: 298 g 298
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||| |||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 610 tatgaagacaaggatggagactggatgcttgtaggcgatgtcccctgggatatgtttgtt 669 Query: 634 g 634 | Sbjct: 670 g 670
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| ||||| |||| |||||| |||||||||||||||||||| ||||| ||||| |||| Sbjct: 8 tgacctatgaggacaaggatggcgactggatgcttgttggagatgtcccctgggagatgt 67 Query: 629 t 629 | Sbjct: 68 t 68
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||||| ||||||||||||||||| || || ||||| ||||||||| Sbjct: 675 tatgaagacaaagatggtgattggatgcttgttggagatgttccgtgggagatgtttgtt 734 Query: 634 g 634 | Sbjct: 735 g 735
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 ||||| |||| ||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 1088 tatgaggacaaggatggtgactggatgcttgtcggtgatgtcccatgggagatgtttgtt 1147 Query: 634 g 634 | Sbjct: 1148 g 1148
>dbj|AK227549.1| Arabidopsis thaliana mRNA for IAA4, complete cds, clone: RAFL14-15-I11 Length = 1005 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 492 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 551
>dbj|AK229447.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL16-78-F23 Length = 1235 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 742 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 801 Query: 631 gttg 634 |||| Sbjct: 802 gttg 805
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor (IAA16) mRNA, complete cds Length = 1279 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 805 Query: 631 gttg 634 |||| Sbjct: 806 gttg 809
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 665 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 724
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 618 Query: 631 gttg 634 |||| Sbjct: 619 gttg 622
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 99 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 158 Query: 631 gttg 634 |||| Sbjct: 159 gttg 162
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 742 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 801 Query: 631 gttg 634 |||| Sbjct: 802 gttg 805
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 618 Query: 631 gttg 634 |||| Sbjct: 619 gttg 622
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 805 Query: 631 gttg 634 |||| Sbjct: 806 gttg 809
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 492
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 701 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 760 Query: 631 gttg 634 |||| Sbjct: 761 gttg 764
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 730 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 789 Query: 631 gttg 634 |||| Sbjct: 790 gttg 793
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 725 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 784 Query: 631 gttg 634 |||| Sbjct: 785 gttg 788
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||||||||||||||||| || || ||||||||||| Sbjct: 497 gatggtgactggatgcttgttggagatgtgccatgggaaatgtt 540
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 492
>emb|CT832608.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN045K20, full insert sequence Length = 1924 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 1414 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 1473 Query: 629 ttg 631 ||| Sbjct: 1474 ttg 1476
>ref|NM_001061511.1| Oryza sativa (japonica cultivar-group) Os05g0230700 (Os05g0230700) mRNA, partial cds Length = 1249 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 725 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 784 Query: 629 ttg 631 ||| Sbjct: 785 ttg 787
>gb|DQ836064.1| Populus tomentosa auxin-regulated protein mRNA, partial cds Length = 964 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||| |||||| |||||||||||||| ||||| || || |||| ||||||||| Sbjct: 730 tatgaagacaaggatggagactggatgcttgtgggagatgttccatggggaatgtttgt 788
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor (IAA7) mRNA, complete cds Length = 1196 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 695
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 647 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 693
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 695
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||||| ||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct: 553 acatatgaagacaaggatggtgattggatgctagttggagatgtaccatgggatatgtt 611
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 725 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 784 Query: 629 ttg 631 ||| Sbjct: 785 ttg 787
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 716 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 775 Query: 629 ttg 631 ||| Sbjct: 776 ttg 778
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 696 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 755 Query: 629 ttg 631 ||| Sbjct: 756 ttg 758
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 590 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 636
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 628 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 782 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 841 Query: 629 ttg 631 ||| Sbjct: 842 ttg 844
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 61.9 bits (31), Expect = 5e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 ||||| |||| |||||| || ||||||||||| ||||| || ||||||| |||||| || Sbjct: 780 tatgaggacaaggatggggattggatgcttgtcggagatgttccttgggggatgtttatt 839 Query: 634 ggctccgtgaagaggctaaggatcatgagga 664 |||| |||||||| || || |||||||||| Sbjct: 840 agctctgtgaagagactcagaatcatgagga 870
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 614 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 660
>gb|AC189266.1| Brassica rapa subsp. pekinensis clone KBrB022L12, complete sequence Length = 101202 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggaga 611 ||||| |||| ||||||||||||||||||||||||||| Sbjct: 61846 tatgaggacaaggatggtgactggatgcttgttggaga 61883
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor (IAA9) mRNA, complete cds Length = 1531 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1146 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1191
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor (IAA9) mRNA, complete cds Length = 1537 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1146 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1191
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1118 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1163
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 873 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 918
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1150 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1195
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||||||| |||||||| ||||||||||| Sbjct: 57544 gatggtgactggatgctggttggagatgtcccttggga 57581
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||| ||||| ||||||||||||||||| || || |||||||| |||||||||| Sbjct: 595 gaagacaaagatggagactggatgcttgttggtgatgtaccttgggagatgtttgttg 652
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1106 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1151
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggaga 611 |||||||||| |||||||||||||||||| |||||||| Sbjct: 564 tatgaagacaaggatggtgactggatgctggttggaga 601
>ref|NM_101427.2| Arabidopsis thaliana IAA5; transcription factor (IAA5) mRNA, complete cds Length = 591 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 381 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 437
>ref|NM_119052.2| Arabidopsis thaliana PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor (PAP2) mRNA, complete cds Length = 1227 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 790 gtgactggatgctggtcggagatgtcccttgggaaatgttt 830
>gb|AY150496.1| Arabidopsis thaliana putative auxin-induced protein IAA5 (At1g15580) mRNA, complete cds Length = 492 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 381 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 437
>gb|AY133516.1| Arabidopsis thaliana At4g29080/F19B15_110 mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 58.0 bits (29), Expect = 7e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||| || ||||||||||| ||||| || || |||| |||||||||| Sbjct: 733 tatgaagacaaggatggagattggatgcttgtaggagatgttccatggggaatgtttgtt 792 Query: 634 g 634 | Sbjct: 793 g 793
>gb|AF332402.1| Arabidopsis thaliana clone C00024 (f) putative phytochrome-associated protein 2 (At4g29080) mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|AY053404.1| Arabidopsis thaliana AT4g29080/F19B15_110 mRNA, complete cds Length = 1189 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 790 gtgactggatgctggtcggagatgtcccttgggaaatgttt 830
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 588 tggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 1 tggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 45
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct: 335 gatggtgattggatgctggttggagatgtcccttgggagatgttt 379
>emb|AJ458326.1|ATH458326 Arabidopsis thaliana mRNA for putative auxin-induced protein 27 (iaa27 gene) Length = 918 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|AF087936.1|AF087936 Arabidopsis thaliana phytochrome-associated protein 2 (PAP2) mRNA, complete cds Length = 1090 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 590 gtgactggatgcttgttggagacgtcccttgggaaatgttt 630 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|U18407.1|ATU18407 Arabidopsis thaliana IAA5 (IAA5) gene, partial cds Length = 577 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 367 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 423
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||| | |||||| ||||||||||||||||| || || |||||||| |||||| Sbjct: 1038 tatgaagataaggatggggactggatgcttgttggtgatgtaccttgggagatgttt 1094
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttgg 608 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 130307 tgacttatgaagacaaggatggagactggatgcttgttgg 130346
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttgg 608 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 37496 tgacttatgaagacaaggatggagactggatgcttgttgg 37535
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 569 tgacatatgaagacagggatggtgactggatgcttgttgg 608 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 7852721 tgacttatgaagacaaggatggagactggatgcttgttgg 7852760 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 27627784 tatgaagacaaggatgctgactggatgcttgttgg 27627750
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 696 gatggtgactggatgcttgtcggtgatgtcccttgggagatgtt 739
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1163 gatggtgactggatgctcgttggtgatgtcccttgggagatgtt 1206
>gb|AY556421.1| Elaeis guineensis IAA type protein (IAA1) mRNA, complete cds Length = 970 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||||||| || || |||||||||||| |||||||||||| Sbjct: 591 gactggatgctcgtgggggacgtcccttggaaaatgtttgttg 633
>ref|NM_001062835.1| Oryza sativa (japonica cultivar-group) Os05g0559400 (Os05g0559400) mRNA, complete cds Length = 1261 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 821 tatgaagacaaggatgctgactggatgcttgttgg 855
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 95060 tatgaagacaaggatgctgactggatgcttgttgg 95026
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Minus Query: 585 ggatggtgactggatgcttgttggaga 611 ||||||||||||||||||||||||||| Sbjct: 111881 ggatggtgactggatgcttgttggaga 111855
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 780 tatgaagacaaggatgctgactggatgcttgttgg 814
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggaga 611 ||||||||||||||||||||||||||| Sbjct: 7924 ggatggtgactggatgcttgttggaga 7950
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 821 tatgaagacaaggatgctgactggatgcttgttgg 855
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 774 tatgaagacaaggatgctgactggatgcttgttgg 808
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 769 tatgaagacaaggatgctgactggatgcttgttgg 803
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 |||||| |||||||||| ||||| || ||||| |||||||||||||| Sbjct: 893 gatggtaactggatgctcgttggcgatgtcccatgggaaatgtttgt 939
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttgg 608 |||||||||| ||||| |||||||||||||||||| Sbjct: 782 tatgaagacaaggatgctgactggatgcttgttgg 816
>emb|CT833720.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130H10, full insert sequence Length = 1269 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 752 acatatgaagataaggatgctgactggatgcttgttgg 789
>ref|NM_001050382.1| Oryza sativa (japonica cultivar-group) Os01g0675700 (Os01g0675700) mRNA, complete cds Length = 1231 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 751 acatatgaagataaggatgctgactggatgcttgttgg 788
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| ||||||||||||||||| || || |||||||| |||||| Sbjct: 780 ggatggagactggatgcttgttggggatgttccttgggagatgttt 825
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggaga 611 |||||||||| |||||| ||||||||||| |||||||| Sbjct: 45 tatgaagacaaggatggagactggatgctagttggaga 82
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 27772040 acatatgaagataaggatgctgactggatgcttgttgg 27772077 Score = 48.1 bits (24), Expect = 0.068 Identities = 30/32 (93%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttgg 608 ||||||| |||||||||||||||||| ||||| Sbjct: 7251178 gaagacaaggatggtgactggatgctggttgg 7251209
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 64095 acatatgaagataaggatgctgactggatgcttgttgg 64132
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 |||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 5880 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttggga 5929
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 |||||||| | |||||||||||||||||| || ||||| ||||| ||||| Sbjct: 23027 tatgaagataaggatggtgactggatgctcgtgggagatgtcccatggga 23076
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 751 acatatgaagataaggatgctgactggatgcttgttgg 788
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 666 acatatgaagataaggatgctgactggatgcttgttgg 703
>emb|BX826607.1|CNS0A46L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 501 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 593 actggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||||| || ||||| |||||||||||||||||| Sbjct: 166 actggatgctggtcggagatgtcccttgggaaatgttt 203
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 677 acatatgaagataaggatgctgactggatgcttgttgg 714
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 |||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 1209 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttggga 1258
>emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6 Length = 5923 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttggga 623 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 4383 gatggtgattggatgctggttggagatgtcccttggga 4420
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggaga 611 |||||||||| ||||||||||||||||| |||||||| Sbjct: 549 tatgaagacaaagatggtgactggatgctggttggaga 586
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| |||| ||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 418 atatgaggacaaagatggcgactggatgctggttggagatgttccttgggagatgttt 475
>emb|CT832204.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA211A15, full insert sequence Length = 1053 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 778 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 830
>emb|CT832203.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113P11, full insert sequence Length = 1057 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 779 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 831
>emb|CT831234.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018G05, full insert sequence Length = 619 Score = 50.1 bits (25), Expect = 0.017 Identities = 37/41 (90%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 222 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 262
>ref|NM_001061335.1| Oryza sativa (japonica cultivar-group) Os05g0178600 (Os05g0178600) mRNA, complete cds Length = 1201 Score = 50.1 bits (25), Expect = 0.017 Identities = 37/41 (90%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 653 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 693
>ref|NM_001049030.1| Oryza sativa (japonica cultivar-group) Os01g0231000 (Os01g0231000) mRNA, complete cds Length = 1193 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 731 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 783
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 50.1 bits (25), Expect = 0.017 Identities = 52/61 (85%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||| || ||||||||||| || || || ||||||| ||||||||| Sbjct: 598 tatgaagacaaggatggagattggatgcttgtcggtgatgttccttgggggatgtttgtt 657 Query: 634 g 634 | Sbjct: 658 g 658
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||| |||||||||||||| ||||| || || ||| |||||||||||| Sbjct: 557 gatggagactggatgcttgtaggagatgttccatggaaaatgtttgttg 605
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Minus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| Sbjct: 67674 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtggga 67622
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 50.1 bits (25), Expect = 0.017 Identities = 52/61 (85%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||| |||||||||||||| || || || || ||| | ||||||||| Sbjct: 730 tatgaagacaaggatggagactggatgcttgtaggcgatgttccatggcagatgtttgtt 789 Query: 634 g 634 | Sbjct: 790 g 790
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||| || || || |||||||||||||| ||||| |||||||| ||||| Sbjct: 1 gaagacagagacggagattggatgcttgttggcgacgttccttgggagatgtt 53
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1115 ggatggtgattggatgcttgttggagatgtaccatgggatatgtt 1159
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 684 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 736
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 50.1 bits (25), Expect = 0.017 Identities = 37/41 (90%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 655 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 695
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 781 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 833
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 732 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 784
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 50.1 bits (25), Expect = 0.017 Identities = 37/41 (90%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 652 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 692
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 50.1 bits (25), Expect = 0.017 Identities = 52/61 (85%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||| | ||| |||||||||||||| || || || ||||| ||||| ||||||||| Sbjct: 613 tatgaagataaggacggtgactggatgctcgtcggtgatgtcccatgggacatgtttgtt 672 Query: 634 g 634 | Sbjct: 673 g 673
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 50.1 bits (25), Expect = 0.017 Identities = 52/61 (85%) Strand = Plus / Plus Query: 574 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 633 |||||||||| |||||| || ||||||||||| || || || || ||||| ||||||||| Sbjct: 889 tatgaagacaaggatggcgattggatgcttgtgggtgatgttccatgggagatgtttgtt 948 Query: 634 g 634 | Sbjct: 949 g 949
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||||||||||||||||| || || ||||| ||||| |||||| Sbjct: 1110 gatggtgactggatgcttgtcggtgatgtcccctgggagatgttt 1154
>emb|CR925879.20| Zebrafish DNA sequence from clone DKEY-6O1 in linkage group 7, complete sequence Length = 225900 Score = 48.1 bits (24), Expect = 0.068 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1043 tgtgctctttttttgggggtcatataca 1070 ||||||||||||||||| |||||||||| Sbjct: 177866 tgtgctctttttttgggagtcatataca 177893
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 48.1 bits (24), Expect = 0.068 Identities = 30/32 (93%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttgg 608 ||||||| |||||||||||||||||| ||||| Sbjct: 145826 gaagacaaggatggtgactggatgctggttgg 145857
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 48.1 bits (24), Expect = 0.068 Identities = 30/32 (93%) Strand = Plus / Plus Query: 577 gaagacagggatggtgactggatgcttgttgg 608 ||||||| |||||||||||||||||| ||||| Sbjct: 52608 gaagacaaggatggtgactggatgctggttgg 52639
>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds Length = 756 Score = 48.1 bits (24), Expect = 0.068 Identities = 39/44 (88%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||| |||||||||||| || || |||||||| ||||| Sbjct: 476 gatggtgacttgatgcttgttggtgatgttccttgggatatgtt 519
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 48.1 bits (24), Expect = 0.068 Identities = 39/44 (88%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 20 gatggagattggatgcttgttggtgatgtcccttgggagatgtt 63
>gb|AY836670.1| Populus tomentosa auxin-responsive protein IAA mRNA, complete cds Length = 764 Score = 46.1 bits (23), Expect = 0.27 Identities = 50/59 (84%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 ||||||||||| | ||||| || |||||||| |||||||| || || ||||||||||| Sbjct: 587 acatatgaagataaagatggcgattggatgctggttggagatgttccatgggaaatgtt 645
>emb|CT829456.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN102L04, full insert sequence Length = 1312 Score = 46.1 bits (23), Expect = 0.27 Identities = 38/43 (88%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||||||| || || |||||||| ||||| |||||||||| Sbjct: 717 gactggatgctcgtcggcgacgtcccatgggagatgtttgttg 759
>ref|NM_001073741.1| Oryza sativa (japonica cultivar-group) Os12g0601300 (Os12g0601300) mRNA, complete cds Length = 1544 Score = 46.1 bits (23), Expect = 0.27 Identities = 38/43 (88%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||||||| || || |||||||| ||||| |||||||||| Sbjct: 953 gactggatgctcgtcggcgacgtcccatgggagatgtttgttg 995
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 46.1 bits (23), Expect = 0.27 Identities = 44/51 (86%) Strand = Plus / Minus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||| ||||| || |||||||||| |||||| || |||||||| Sbjct: 69337 atatgaagacaaagatggagattggatgcttgctggagatgttccttggga 69287
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.27 Identities = 38/43 (88%) Strand = Plus / Plus Query: 592 gactggatgcttgttggagacgtcccttgggaaatgtttgttg 634 ||||||||||| || || |||||||| ||||| |||||||||| Sbjct: 955 gactggatgctcgtcggcgacgtcccatgggagatgtttgttg 997
>emb|X53436.1|ATAUX227 A.thaliana auxin-inducible Aux2-27 gene Length = 1815 Score = 46.1 bits (23), Expect = 0.27 Identities = 44/51 (86%) Strand = Plus / Plus Query: 573 atatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||| ||||| || |||||||||| |||||| || |||||||| Sbjct: 921 atatgaagacaaagatggagattggatgcttgctggagatgttccttggga 971
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 632 ||||||||||||||||| || || || ||||| ||||| |||||||| Sbjct: 359 gatggtgactggatgctcgtgggtgatgtcccatgggagatgtttgt 405
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 aggccgaaaccaagaaggccgc 45 |||||||||||||||||||||| Sbjct: 2178874 aggccgaaaccaagaaggccgc 2178895
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) (IAA7) mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatggga 686
>gb|AC142103.3| Mus musculus BAC clone RP24-287E15 from chromosome 17, complete sequence Length = 175787 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 gacaaggaggagggcgagaagaaggg 96 |||||||||||||| ||||||||||| Sbjct: 123838 gacaaggaggagggagagaagaaggg 123813
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1147 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1192
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 528 gaagtccttgaagctgttagacaact 553 ||||||||||||||||| |||||||| Sbjct: 151821 gaagtccttgaagctgtaagacaact 151796
>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence Length = 199655 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1063 catatacatgtttttgtgtgtg 1084 |||||||||||||||||||||| Sbjct: 53654 catatacatgtttttgtgtgtg 53633
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| |||||||||||||| || || || |||||||| |||||| Sbjct: 1112 ggatggggactggatgcttgtcggtgatgtaccttgggagatgttt 1157
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1147 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1192
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 630 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1146 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1191
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttggga 623 |||||||| |||||||||||||| || ||||| ||||| Sbjct: 1052 gatggtgattggatgcttgttggcgatgtcccatggga 1089
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 590 gtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||| || ||||| ||||||||||| Sbjct: 52325 gtgactggatgctggtcggagatgtcccttggga 52292
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 590 gtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||| || ||||| ||||||||||| Sbjct: 77356 gtgactggatgctggtcggagatgtcccttggga 77323
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 590 gtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||| || ||||| ||||||||||| Sbjct: 35852 gtgactggatgctggtcggagatgtcccttggga 35819
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 571 acatatgaagacagggatggtgactggatgcttgttgg 608 |||||||| || | ||||| |||||||||||||||||| Sbjct: 654 acatatgaggataaggatgctgactggatgcttgttgg 691
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 586 gatggtgactggatgcttgttggagacgtcccttggga 623 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 36787 gatggtgactggatgctcgttggcgatgtcccatggga 36824
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome Length = 3200938 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggccgaaaccaagaaggccgc 45 ||||||||||||||||||||| Sbjct: 824368 ggccgaaaccaagaaggccgc 824348
>ref|NM_116075.2| Arabidopsis thaliana IAA30; transcription factor (IAA30) mRNA, complete cds Length = 731 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 474 ggtgactggatgatggttggagatgttccttgggagatgtt 514
>ref|NM_130267.3| Arabidopsis thaliana IAA20; transcription factor (IAA20) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 442 ggtgactggatgatggttggagatgttccttgggagatgtt 482
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aggccgccgccgatgactctg 59 ||||||||||||||||||||| Sbjct: 890 aggccgccgccgatgactctg 910
>gb|AF348576.1| Arabidopsis thaliana clone C00049 (f) auxin-induced protein IAA20 (At2g46990) mRNA, complete cds Length = 528 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 436 ggtgactggatgatggttggagatgttccttgggagatgtt 476
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ggatggtgactggatgcttgt 605 ||||||||||||||||||||| Sbjct: 942 ggatggtgactggatgcttgt 962
>dbj|AK117233.1| Arabidopsis thaliana At2g46990 mRNA for putative auxin-induced protein, complete cds, clone: RAFL16-78-L02 Length = 644 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 442 ggtgactggatgatggttggagatgttccttgggagatgtt 482
>emb|BX822779.1|CNS0A64T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 732 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 474 ggtgactggatgatggttggagatgttccttgggagatgtt 514
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 578 aagacagggatggtgactggatgct 602 |||||| |||||||||||||||||| Sbjct: 4715 aagacaaggatggtgactggatgct 4691
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 510 ggaattgccagatggtacgaa 530 ||||||||||||||||||||| Sbjct: 2238892 ggaattgccagatggtacgaa 2238912
>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer protein precursor, exons 1-2 Length = 1965 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1047 ctctttttttgggggtcatat 1067 ||||||||||||||||||||| Sbjct: 1446 ctctttttttgggggtcatat 1426
>gb|U49076.1|ATU49076 Arabidopsis thaliana early auxin-induced (IAA20) mRNA, partial cds Length = 624 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 410 ggtgactggatgatggttggagatgttccttgggagatgtt 450
>gb|AY669801.1| Arabidopsis thaliana clone C105339 IAA30 (At3g62100) mRNA, complete cds Length = 550 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 589 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 629 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 430 ggtgactggatgatggttggagatgttccttgggagatgtt 470 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 190,493,911 Number of extensions: 10992118 Number of successful extensions: 207010 Number of sequences better than 10.0: 175 Number of HSP's gapped: 207010 Number of HSP's successfully gapped: 189 Length of query: 1115 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1092 Effective length of database: 18,503,978,556 Effective search space: 20206344583152 Effective search space used: 20206344583152 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
