ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf137l17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0250600:Os02g0250600 35 0.057
2AK121501:Os01g0375200 28 5.3

>Os02g0250600:Os02g0250600 |
          Length = 471
 Score = 34.7 bits (78), Expect = 0.057
 Identities = 23/64 (35%), Positives = 36/64 (56%)
 Frame = -1

Query: 544 SRTQTKFPRKSKQTDGSWHAAGSEVAGLRYHVCEHKSMEFKIPNDSLRHTSPRHRAKAHR 365
           S+ Q K PRK+KQ +G  H+A  E AGL   +  +++   +   D++R    R+ AKA+R
Sbjct: 3   SQQQQKQPRKAKQKEGEGHSA-EEAAGLE-EIGRYRAQAQQNSMDAIRDAEERY-AKANR 59

Query: 364 TENG 353
              G
Sbjct: 60  EHGG 63



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>AK121501:Os01g0375200 |
          Length = 572

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 174 PPTCGEESILRPDRTRGEGTFLALPV 251
           PP   + S+ R  RTRGE T L +P+
Sbjct: 46  PPLLADRSLARRRRTRGEMTLLCVPL 71


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,001,260
Number of extensions: 482534
Number of successful extensions: 1299
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1299
Number of HSP's successfully gapped: 2
Length of query: 218
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 121
Effective length of database: 11,515,878
Effective search space: 1393421238
Effective search space used: 1393421238
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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