ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf137j16 |
|---|---|
| Clone Library Name | barley_pub |
>O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human)| Length = 505 Score = 36.2 bits (82), Expect(2) = 0.10 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +3 Query: 129 PAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 P P +++ P P R PPP ALP++ P P PPSV VG P P Sbjct: 324 PPPPSRPSVAVPPPPPNRMYPPPPPALPSS-APSGPPPPPPSVLGVGPVAPPPP 376 Score = 22.3 bits (46), Expect(2) = 0.10 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Frame = +2 Query: 14 PPIHPPCNL---PCLSIEREDAPCPPITAMVAAPP 109 PP PP N P + R P PP A AAPP Sbjct: 289 PPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP 323
>Q8N3X1:FNBP4_HUMAN Formin-binding protein 4 - Homo sapiens (Human)| Length = 1017 Score = 38.9 bits (89), Expect = 0.17 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Frame = +1 Query: 52 HRARGCSLPSNH-SHGRRPSSAKFVECQPPFSI-LPSLEAPPDLGGALPHLRSLSPPPKC 225 H+ARG SL SN+ P+ + EC P + PSL+ P GA+P + PPP Sbjct: 851 HQARGMSLQSNYLGLAAAPAIMSYAECSVPIGVTAPSLQ-PVQARGAVPTATIIEPPPP- 908 Query: 226 RGHPRSIRHPLRPWARTFPPSRSSASYRD 312 P P P + PP ++ +D Sbjct: 909 ---PPPPPPPPPPAPKMPPPEKTKKGRKD 934
>P78415:IRX3_HUMAN Iroquois-class homeodomain protein IRX-3 - Homo sapiens (Human)| Length = 501 Score = 38.5 bits (88), Expect = 0.22 Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = +3 Query: 27 LPVTSRAS--PSSARMLPALQSQPWS----PPLLC*IRGMPAPFLYSAI--SRSPTGPRR 182 LPV S A P A P+L S P S P + P ++S + SP PRR Sbjct: 305 LPVLSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIWSLAETATSPDNPRR 364 Query: 183 SAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALPELRLLPGWMHR 323 S P + P + S+ Q P+ AA AH L P W +R Sbjct: 365 SPPGAGGSPPGAAVAPSALQLSPAAAAAAAHRLVSAPLGKFPAWTNR 411
>Q6ZQ03:FNBP4_MOUSE Formin-binding protein 4 - Mus musculus (Mouse)| Length = 1031 Score = 37.4 bits (85), Expect = 0.49 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Frame = +1 Query: 52 HRARGCSLPSNH-SHGRRPSSAKFVECQPPFSI-LPSLEAPPDLGGALPHLRSLSPPPKC 225 H+ARG SL SN+ P+ + EC P + PSL+ P G + + PPP Sbjct: 861 HQARGMSLQSNYLGLAAAPALMSYAECSVPIGVTTPSLQ-PAQARGTMAAPAVVEPPPPP 919 Query: 226 RGHPRSIRHPLRPWARTFPPSRSSASYRD 312 P P P + PP ++ +D Sbjct: 920 PPPPTPTPPPPPPAPKVPPPEKTRKGKKD 948
>Q9Y3S1:WNK2_HUMAN Serine/threonine-protein kinase WNK2 - Homo sapiens (Human)| Length = 2297 Score = 36.6 bits (83), Expect = 0.83 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = +3 Query: 81 QSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSA-----PPPSFALPATEMPRSSPQY 245 Q+ P + P + G PAP+ ++ PT P A P P LPA P PQ+ Sbjct: 1012 QAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLPAA--PELLPQF 1069 Query: 246 PPSVAAVGAHLPALP 290 P S+A V A + ++P Sbjct: 1070 PSSLATVSASVQSVP 1084
>Q9UVY5:CPSKS_GIBFU Ent-kaurene synthase - Gibberella fujikuroi (Bakanae and foot rot| disease fungus) (Fusarium moniliforme) Length = 952 Score = 35.8 bits (81), Expect = 1.4 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = -1 Query: 1999 QGSDLVTLLARERSGSLTTDPYVNLAMLKTTEYF*MYSQANQTNIYTKQCNLWHSSMHLL 1820 +G D T ER SLT++ +V L++LK + + Q +T ++T C W S H + Sbjct: 356 EGKDHFTTFGSERDPSLTSNLHVLLSLLKQSNLSQYHPQILKTTLFT--CRWWWGSDHCV 413 Query: 1819 LEQY*LS 1799 +++ LS Sbjct: 414 KDKWNLS 420
>Q6SPE9:SAMD1_RABIT Atherin - Oryctolagus cuniculus (Rabbit)| Length = 550 Score = 35.4 bits (80), Expect = 1.9 Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +3 Query: 36 TSRASPSSARMLPALQ-SQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALP 212 T+ SP A+ P Q + P + P PAP A + P GPRR APPP+ A+ Sbjct: 159 TAPPSPGPAQPGPRAQRAAPLAAP-------PPAPAAPPAAA-PPAGPRR-APPPAAAVA 209 Query: 213 ATEMPRSSPQYPPS 254 A E P P PP+ Sbjct: 210 ARESPLPPPPQPPA 223 Score = 33.9 bits (76), Expect = 5.4 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRR------SAP 191 PV + A+P+ A A + +PP P P + GPR +AP Sbjct: 138 PVAAAAAPARAPRAAAAAAAATAPP-------SPGP--------AQPGPRAQRAAPLAAP 182 Query: 192 PPSFALPATEMPRSSPQY-PPSVAAVGAHLPALP 290 PP+ A P P + P+ PP AAV A LP Sbjct: 183 PPAPAAPPAAAPPAGPRRAPPPAAAVAARESPLP 216
>Q9S740:AGP19_ARATH Lysine-rich arabinogalactan protein 19 precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 222 Score = 35.4 bits (80), Expect = 1.9 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 10/97 (10%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAIS------RSPTGPRRSAP 191 P T+ P SA PA P +PP PAP + IS + P P SAP Sbjct: 53 PPTTTTPPVSAAQPPA---SPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAP 109 Query: 192 ----PPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 PP PA P +P PP A PA P Sbjct: 110 TVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASP 146
>Q95107:WASL_BOVIN Neural Wiskott-Aldrich syndrome protein - Bos taurus (Bovine)| Length = 505 Score = 32.0 bits (71), Expect(2) = 2.2 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 129 PAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 P P + P P R PPP ALP++ P P PP ++ G+ P P Sbjct: 324 PPPPSRPGVGAPPPPPNRMYPPPLPALPSS-APSGPPPPPPPLSVSGSVAPPPP 376 Score = 21.9 bits (45), Expect(2) = 2.2 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 14 PPIHPPCNLPCLSIEREDAPCPPITAMVAAPP 109 PP H P + R P PP A AAPP Sbjct: 292 PPPHSSGPPPPPARGRGAPPPPPSRAPTAAPP 323
>Q6PFK1:ZN598_DANRE Zinc finger protein 598 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 953 Score = 35.0 bits (79), Expect = 2.4 Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSP---TGPRRSAPPPS 200 PVT +A PS PAL S+ P P SA+ P GP S PPP Sbjct: 709 PVTDQAPPSKEEEFPALISKKPPPGFK---SAFPLRNSQSALPPPPPPGLGPAVSKPPPG 765 Query: 201 FALPATEMPRSSPQYPPSVAAVGAHLPAL 287 F T +P +S SV+AV PA+ Sbjct: 766 F----TGVPLNSNVEDSSVSAVNRPTPAI 790
>O36027:WSP1_SCHPO Wiskott-Aldrich syndrome homolog protein 1 - Schizosaccharomyces| pombe (Fission yeast) Length = 574 Score = 35.0 bits (79), Expect = 2.4 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQ------PWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAP 191 P R++PS+ R P L S P PP I G AP L + S T Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA---IPGRSAPALPPLGNASRTSTPPVPT 419 Query: 192 PPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 PPS LP + P P PPS+ P LP Sbjct: 420 PPS--LPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
>Q90701:TEAD3_CHICK Transcriptional enhancer factor TEF-5 - Gallus gallus (Chicken)| Length = 433 Score = 35.0 bits (79), Expect = 2.4 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Frame = +3 Query: 39 SRASPSSARMLPA--LQSQPWSPPLLC*IRGMPAP-FLYSAISRSPTGPRRSAPPPS--- 200 S AS SSA+++ A LQ++ PP P P ++SA R +GP P PS Sbjct: 125 SMASMSSAQIVSASVLQNKLSPPP--------PLPQAVFSAAPRFWSGPIPGQPGPSQDI 176 Query: 201 --FALPATEMPRSSPQYPPSVAAVGAHLPALPELRLLPGWMHR 323 FA PA + P PPS+A+ P P +P W R Sbjct: 177 KPFAQPAYPI---QPPMPPSLASYEPLAPLPPAASAVPVWQDR 216
>O18964:SYNJ1_BOVIN Synaptojanin-1 - Bos taurus (Bovine)| Length = 1324 Score = 35.0 bits (79), Expect = 2.4 Identities = 28/86 (32%), Positives = 34/86 (39%) Frame = +3 Query: 27 LPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFA 206 LPV +PS PA QS P + +PA L S P+R PP A Sbjct: 1064 LPVRPSRAPSRTPGPPASQSSP--------VDTLPATQLQQKDSSQTLEPKRPPPPRPVA 1115 Query: 207 LPATEMPRSSPQYPPSVAAVGAHLPA 284 PA P PQ PP + + PA Sbjct: 1116 PPARPAP---PQRPPPPSGARSPAPA 1138
>Q9FPQ6:GP1_CHLRE Vegetative cell wall protein gp1 precursor - Chlamydomonas| reinhardtii Length = 555 Score = 35.0 bits (79), Expect = 2.4 Identities = 32/86 (37%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Frame = +3 Query: 39 SRASPSSARMLPALQSQ-PWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAP-PPSFALP 212 S A PS A P S P SPP PAP + S +P P +P PPS A P Sbjct: 57 SPAPPSPAPPSPGPPSPAPPSPP-------SPAPPSPAPPSPAPPSPAPPSPAPPSPAPP 109 Query: 213 ATEMPRSSPQYPPSVAAVGAHLPALP 290 + P +P PPS A PA P Sbjct: 110 SPAPPSPAPPSPPSPAPPSPSPPAPP 135
>P13983:EXTN_TOBAC Extensin precursor - Nicotiana tabacum (Common tobacco)| Length = 620 Score = 35.0 bits (79), Expect = 2.4 Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = +3 Query: 48 SPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRS--PTGPRRSAPPPSFALPATE 221 SP LP S +SPP + P P YS + P P S PPPSF+ P Sbjct: 331 SPPPPTYLPLPSSPIYSPPPP--VYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPP--- 385 Query: 222 MPRSSPQYPPSVAAVGAHLPALP 290 P + Q PP A LPA P Sbjct: 386 -PPTYEQSPPPPPAYSPPLPAPP 407
>Q29W20:EGR1_BOVIN Early growth response protein 1 - Bos taurus (Bovine)| Length = 540 Score = 35.0 bits (79), Expect = 2.4 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 6/102 (5%) Frame = +3 Query: 6 ISSLLSIL--PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPR 179 +S L+S+ P TS ++ S A A QS PPL C ++ + +YSA PT Sbjct: 158 VSGLVSMTNPPATSSSASSPAASSSASQS----PPLSCAVQSNDSSPIYSAAPTFPTPNT 213 Query: 180 RSAP-PPSFALPATEMPRSSPQYPPSV---AAVGAHLPALPE 293 P P A P + P + QYPP A G +P +P+ Sbjct: 214 DIFPEPQGQAFPGSAGP--ALQYPPPAYPGAKGGFQVPMIPD 253
>Q91YD9:WASL_MOUSE Neural Wiskott-Aldrich syndrome protein - Mus musculus (Mouse)| Length = 501 Score = 31.6 bits (70), Expect(2) = 2.8 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = +3 Query: 129 PAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 P P + P P R PPP ALP++ P PPS+A A P P Sbjct: 321 PPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPPPPPSMAGSTAPPPPPP 374 Score = 21.9 bits (45), Expect(2) = 2.8 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 14 PPIHPPCNLPCLSIEREDAPCPPITAMVAAPP 109 PP H P + R P PP A AAPP Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSRAPTAAPP 320
>Q8BH43:WASF2_MOUSE Wiskott-Aldrich syndrome protein family member 2 - Mus musculus| (Mouse) Length = 497 Score = 34.7 bits (78), Expect = 3.2 Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 4/76 (5%) Frame = +3 Query: 36 TSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPP----SF 203 TS SPS P L S P P PAP P P S PPP F Sbjct: 292 TSMVSPSHPPPAPPLSSPPGPKPGFA---PPPAP---------PPPPPMSVPPPLPSMGF 339 Query: 204 ALPATEMPRSSPQYPP 251 P T P S P +PP Sbjct: 340 GSPGTPPPPSPPSFPP 355
>P08154:EGR1_RAT Early growth response protein 1 - Rattus norvegicus (Rat)| Length = 508 Score = 34.7 bits (78), Expect = 3.2 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%) Frame = +3 Query: 6 ISSLLSIL--PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPR 179 +S L+S+ P +S ++PS A + SQ SPPL C + + +YSA PT Sbjct: 130 VSGLVSMTNPPTSSSSAPSPAASSSSSASQ--SPPLSCAVPSNDSSPIYSAAPTFPTPNT 187 Query: 180 RSAP-PPSFALP---ATEMPRSSPQYPPSVAAVGAHLPALPE 293 P P S A P T + P YP + G +P +P+ Sbjct: 188 DIFPEPQSQAFPGSAGTALQYPPPAYPATKG--GFQVPMIPD 227
>P08046:EGR1_MOUSE Early growth response protein 1 - Mus musculus (Mouse)| Length = 533 Score = 34.7 bits (78), Expect = 3.2 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%) Frame = +3 Query: 6 ISSLLSIL--PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPR 179 +S L+S+ P +S ++PS A + SQ SPPL C + + +YSA PT Sbjct: 155 VSGLVSMTNPPTSSSSAPSPAASSSSSASQ--SPPLSCAVPSNDSSPIYSAAPTFPTPNT 212 Query: 180 RSAP-PPSFALP---ATEMPRSSPQYPPSVAAVGAHLPALPE 293 P P S A P T + P YP + G +P +P+ Sbjct: 213 DIFPEPQSQAFPGSAGTALQYPPPAYPATKG--GFQVPMIPD 252
>Q8ND99:CS016_HUMAN Uncharacterized protein C19orf16 - Homo sapiens (Human)| Length = 567 Score = 34.7 bits (78), Expect = 3.2 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Frame = +3 Query: 72 PALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSS--PQY 245 P Q P P C APFL + P P S PP P + P +S P+ Sbjct: 50 PPCQKAPSGPVTSC-----KAPFLVDQSQKLPAVPASSWKPPPGLAPPQKAPAASAPPRK 104 Query: 246 PPSVAAVGAHLPALP 290 P+V A PA+P Sbjct: 105 APAVPAPSQKAPAVP 119
>P18616:RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1840 Score = 34.3 bits (77), Expect = 4.1 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = +3 Query: 48 SPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALPATEMP 227 SPS+AR+ PA P SP + ++ S SPT P S P+++ + Sbjct: 1741 SPSNARLSPASPYSPTSPN-----------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 1789 Query: 228 RSSPQYPPSVAAVGAHLPALP 290 +SP Y PS + P LP Sbjct: 1790 GASPDYSPS----AGYSPTLP 1806
>P47709:RP3A_RAT Rabphilin-3A - Rattus norvegicus (Rat)| Length = 684 Score = 34.3 bits (77), Expect = 4.1 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +3 Query: 126 MPAPFLYSAISRSPTGPRRSAPPPS-FALPATEMPRSSPQYPPSVA 260 MP+P + P G R+AP P F +TE P S P YP +VA Sbjct: 285 MPSPAPPQPVQPGPPGGSRAAPGPGRFPEQSTEAPPSDPGYPGAVA 330
>Q9P2A4:ABI3_HUMAN ABI gene family member 3 - Homo sapiens (Human)| Length = 366 Score = 34.3 bits (77), Expect = 4.1 Identities = 26/83 (31%), Positives = 31/83 (37%) Frame = +3 Query: 3 SISSLLSILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRR 182 S +S S L A P Q+ P +PPL + P P R PT Sbjct: 203 SAASSASSLASAGSAEGVGGAPTPKGQAAPPAPPLPSSLDPPPPPAAVEVFQRPPTLEEL 262 Query: 183 SAPPPSFALPATEMPRSSPQYPP 251 S PPP LP +P P PP Sbjct: 263 SPPPPDEELP---LPLDLPPPPP 282
>P08775:RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1 - Mus musculus (Mouse)| Length = 1970 Score = 33.9 bits (76), Expect = 5.4 Identities = 24/78 (30%), Positives = 37/78 (47%) Frame = +3 Query: 21 SILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPS 200 S P + SPSS R P QS ++P + S+ S SPT P+ + PS Sbjct: 1796 SYSPTSPSYSPSSPRYTP--QSPTYTPS--------SPSYSPSSPSYSPTSPKYTPTSPS 1845 Query: 201 FALPATEMPRSSPQYPPS 254 ++ + E +SP+Y P+ Sbjct: 1846 YSPSSPEYTPASPKYSPT 1863
>P24928:RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 - Homo sapiens (Human)| Length = 1970 Score = 33.9 bits (76), Expect = 5.4 Identities = 24/78 (30%), Positives = 37/78 (47%) Frame = +3 Query: 21 SILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPS 200 S P + SPSS R P QS ++P + S+ S SPT P+ + PS Sbjct: 1796 SYSPTSPSYSPSSPRYTP--QSPTYTPS--------SPSYSPSSPSYSPTSPKYTPTSPS 1845 Query: 201 FALPATEMPRSSPQYPPS 254 ++ + E +SP+Y P+ Sbjct: 1846 YSPSSPEYTPTSPKYSPT 1863
>P11414:RPB1_CRIGR DNA-directed RNA polymerase II subunit RPB1 - Cricetulus griseus| (Chinese hamster) Length = 467 Score = 33.9 bits (76), Expect = 5.4 Identities = 24/78 (30%), Positives = 37/78 (47%) Frame = +3 Query: 21 SILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPS 200 S P + SPSS R P QS ++P + S+ S SPT P+ + PS Sbjct: 293 SYSPTSPSYSPSSPRYTP--QSPTYTPS--------SPSYSPSSPSYSPTSPKYTPTSPS 342 Query: 201 FALPATEMPRSSPQYPPS 254 ++ + E +SP+Y P+ Sbjct: 343 YSPSSPEYTPTSPKYSPT 360
>P35074:RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1 - Caenorhabditis briggsae| Length = 1853 Score = 33.9 bits (76), Expect = 5.4 Identities = 23/80 (28%), Positives = 36/80 (45%) Frame = +3 Query: 21 SILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPS 200 S P + + SP+S + P+ + S P +P +S+ SPT P S PS Sbjct: 1737 SYSPTSPQYSPTSPQYSPSSPTYTPSSPTY----NPTSPRAFSSPQYSPTSPTYSPTSPS 1792 Query: 201 FALPATEMPRSSPQYPPSVA 260 + + + +SP Y PS A Sbjct: 1793 YTPSSPQYSPTSPTYTPSPA 1812
>Q03211:PEXLP_TOBAC Pistil-specific extensin-like protein precursor - Nicotiana tabacum| (Common tobacco) Length = 426 Score = 33.9 bits (76), Expect = 5.4 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Frame = +3 Query: 99 PPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSSPQYPPSVAAV---- 266 PP + +P+PF P P S PPPS P+ P SP P ++ + Sbjct: 41 PPAEIPLPDIPSPFDGPTFVLPPPSPLPSPPPPS---PSPPPPSPSPPPPSTIPLIPPFT 97 Query: 267 GAHLPALPELRL 302 G LP LP +L Sbjct: 98 GGFLPPLPGSKL 109
>Q8CGB6:TENC1_MOUSE Tensin-like C1 domain-containing phosphatase - Mus musculus (Mouse)| Length = 1400 Score = 33.5 bits (75), Expect = 7.1 Identities = 35/104 (33%), Positives = 42/104 (40%), Gaps = 12/104 (11%) Frame = +3 Query: 36 TSRASPSSA--RMLPALQSQPWSPPLLC*IRGM----------PAPFLYSAISRSPTGPR 179 T+ ASP S LP L+ PW P RG P P + SP P+ Sbjct: 996 TNSASPRSPVPTTLPGLRHAPWQGP-----RGTSDSPDGSPLTPVPTQMPWLVGSPEPPQ 1050 Query: 180 RSAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALPELRLLPG 311 S+P P+F L AT + P PP LPE R LPG Sbjct: 1051 -SSPTPAFPL-ATSYDANGPIQPP-----------LPEKRHLPG 1081
>Q63HR2:TENC1_HUMAN Tensin-like C1 domain-containing phosphatase - Homo sapiens (Human)| Length = 1409 Score = 33.5 bits (75), Expect = 7.1 Identities = 32/93 (34%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Frame = +3 Query: 45 ASPSSA--RMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALPAT 218 ASP S LP L+ PW P RG P + SP P S P A P Sbjct: 999 ASPRSPVPTTLPGLRHAPWQGP-----RGPP-----DSPDGSPLTPVPSQMPWLVASPEP 1048 Query: 219 EMPRSSPQYP--PSVAAVGAHLPALPELRLLPG 311 +P +P S G P LPE R LPG Sbjct: 1049 PQSSPTPAFPLAASYDTNGLSQPPLPEKRHLPG 1081
>Q61207:SAP_MOUSE Sulfated glycoprotein 1 precursor - Mus musculus (Mouse)| Length = 557 Score = 33.5 bits (75), Expect = 7.1 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +3 Query: 129 PAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSS 236 PAP + SA+ + PT P++ A P ALPA P+ + Sbjct: 403 PAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKN 438
>Q9JL26:FMNL_MOUSE Formin-like protein 1 - Mus musculus (Mouse)| Length = 1094 Score = 33.5 bits (75), Expect = 7.1 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFA- 206 P S SPS+A +P S P PP P P L S P+ P + P P A Sbjct: 518 PRVSTDSPSTAESIPEAASPPPPPP----PPPPPLPNLQSQQEAPPSAPPLAPPLPGCAE 573 Query: 207 -LPATEMPRSSPQYPP 251 PA +P P PP Sbjct: 574 PPPAPPLPGDLPPPPP 589
>P18146:EGR1_HUMAN Early growth response protein 1 - Homo sapiens (Human)| Length = 543 Score = 33.5 bits (75), Expect = 7.1 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Frame = +3 Query: 6 ISSLLSIL--PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPR 179 +S L+S+ P +S ++PS A + S SPPL C + + +YSA PT Sbjct: 158 VSGLVSMTNPPASSSSAPSPAA---SSASASQSPPLSCAVPSNDSSPIYSAAPTFPTPNT 214 Query: 180 RSAP-PPSFALPATEMPRSSPQYPP---SVAAVGAHLPALPE 293 P P S A P + ++ QYPP A G +P +P+ Sbjct: 215 DIFPEPQSQAFPGS--AGTALQYPPPAYPAAKGGFQVPMIPD 254
>Q8WXD9:CSKI1_HUMAN Caskin-1 - Homo sapiens (Human)| Length = 1431 Score = 33.5 bits (75), Expect = 7.1 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFAL 209 P RA + + P P +P + + G+P+ + SP PP + A Sbjct: 1258 PEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPS----GSAGPSPAPSPARQPPAALAK 1313 Query: 210 PATEMPR--SSPQYPPSVAAVGAHLPALP 290 P P +SP PPS A H+PA P Sbjct: 1314 PPGTPPSLGASPAKPPSPGAPALHVPAKP 1342
>Q8BP27:CJ078_MOUSE Uncharacterized protein C10orf78 homolog - Mus musculus (Mouse)| Length = 319 Score = 33.5 bits (75), Expect = 7.1 Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = +3 Query: 30 PVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPR-RSAPPPSFA 206 P TS A+P ++ P S P SP + P+P SP P+ R PP Sbjct: 36 PPTSPAAPQTSENPP---SPPTSPAVPQTRENPPSP------PTSPAAPQPRENPPSPPT 86 Query: 207 LPATEMPRSSPQYPPSVAAVGAHLPALPELRLLPGWMH 320 PA PR +P PP+ PA P+ R P H Sbjct: 87 SPAAPQPRENPPSPPT-------SPAAPQPRENPPSPH 117
>O42923:CIP1_SCHPO RNA-binding post-transcriptional regulator cip1 -| Schizosaccharomyces pombe (Fission yeast) Length = 490 Score = 33.5 bits (75), Expect = 7.1 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = +3 Query: 81 QSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAP---PPSFALPATEMPRS 233 QSQP SP L MPAP + +SAP PPSFA+P T RS Sbjct: 396 QSQPASPNLRF---NMPAPLATRFLQEHSLNGTKSAPITPPPSFAVPLTNQLRS 446
>P47068:BBC1_YEAST Myosin tail region-interacting protein MTI1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1157 Score = 33.5 bits (75), Expect = 7.1 Identities = 33/87 (37%), Positives = 38/87 (43%) Frame = +3 Query: 48 SPSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPPPSFALPATEMP 227 S SA +P+ S P +PP+ PAP SA S P P PP S A PA P Sbjct: 696 SAPSAPPVPSAPSVPSAPPV------PPAPPALSAPSVPPVPP---VPPVSSAPPALSAP 746 Query: 228 RSSPQYPPSVAAVGAHLPALPELRLLP 308 S P PP+ A PA P LP Sbjct: 747 -SIPPVPPTPPAP----PAPPAPLALP 768
>Q07518:RDRP_P1AMV RNA replication protein - Plantago asiatica mosaic potexvirus (P1AMV)| Length = 1385 Score = 33.5 bits (75), Expect = 7.1 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Frame = -2 Query: 1638 SNSCGP---PTT-HLIAIPWLTYHIPNI-------IGCVHKTSSSIIIIAHT-FDHLPRS 1495 SN GP PT + +PW+ + +P + + H S+ +I+ T LPR+ Sbjct: 527 SNPSGPDAQPTAQNPETLPWVAW-LPKLNALGFEALEVQHDPSTGEMIMPITDTQELPRA 585 Query: 1494 GWAVQYRGRGYSNRFDTLKRLHTLPTPWSADLVIPFGWTS 1375 ++G TL+ L+ PTPWS D +TS Sbjct: 586 TLPAHWQGHNLERILSTLRSLNRFPTPWSPDRTRARAFTS 625
>O08816:WASL_RAT Neural Wiskott-Aldrich syndrome protein - Rattus norvegicus (Rat)| Length = 501 Score = 30.0 bits (66), Expect(2) = 7.6 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 129 PAPFLYSAISRSPTGPRRSAPPPSFALPATEMPRSSPQYPPSVAAVGAHLPALP 290 P P + P P R PPP ALP++ S P PP ++ G+ P P Sbjct: 321 PPPPSRPGVVVPPPPPNRMYPPPPPALPSS--APSGPPPPPPLSMAGSTAPPPP 372 Score = 21.9 bits (45), Expect(2) = 7.6 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 14 PPIHPPCNLPCLSIEREDAPCPPITAMVAAPP 109 PP H P + R P PP A AAPP Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSRAPTAAPP 320
>Q9Y2N3:PO121_HUMAN Nuclear envelope pore membrane protein POM 121 - Homo sapiens| (Human) Length = 1229 Score = 33.1 bits (74), Expect = 9.2 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Frame = +3 Query: 9 SSLLSILPVTSRASPSSARMLPALQSQPWSPPLLC*IRGMPAP---FLYSAISRSPTGPR 179 ++LL ++P S + + P LQ++ + P PAP FL+ + SP+ P Sbjct: 636 TTLLGLIPAPSMVPATDTKAPPTLQAETATKPQAT-SAPSPAPKQSFLFGTQNTSPSSPA 694 Query: 180 R---SAPPPSFALPATEMPRSSPQYP----PSVAAVGAHLPALP 290 S+ P F T P+S + P PSV A +LP Sbjct: 695 APAASSASPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLP 738
>O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia protein 2 - Homo sapiens| (Human) Length = 5262 Score = 33.1 bits (74), Expect = 9.2 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +3 Query: 72 PALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTGPRRSAPP-PSFALPATEMPRSSPQYP 248 P + P SPP P +S + SP P +PP P+ P + P +SP P Sbjct: 496 PPPEESPLSPP--------PESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSP 547 Query: 249 P 251 P Sbjct: 548 P 548
>Q4WHP5:HSE1_ASPFU Class E vacuolar protein-sorting machinery protein hse1 -| Aspergillus fumigatus (Sartorya fumigata) Length = 584 Score = 33.1 bits (74), Expect = 9.2 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +3 Query: 51 PSSARMLPALQSQPWSPPLLC*IRGMPAPFLYSAISRSPTG-PRRSAPPPSFALPATEMP 227 PSS++ LP S PP G+ F + P+G P A P A A + P Sbjct: 461 PSSSQRLPYPPSGAQVPP------GVHQQFQHQQQEYPPSGYPPEDASKPPAAGFALQPP 514 Query: 228 RSSPQYPPSVAAVGAHLP 281 + + Q PP A GAH P Sbjct: 515 QQTLQQPPYPTAPGAHQP 532
>Q6UUV9:CRTC1_HUMAN CREB-regulated transcription coactivator 1 - Homo sapiens (Human)| Length = 634 Score = 33.1 bits (74), Expect = 9.2 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = +3 Query: 72 PALQSQPWSPPLLC*IRGMPA-PFLYSA-ISRSPTGPRRSAPPPSFALPATEMPRSSPQY 245 PA Q P PP +R P P L SA ++R P PPP + +P+S P+ Sbjct: 375 PASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQ------PPPLAVTVPSSLPQSPPEN 428 Query: 246 P--PSVAAVGAHLPALPELRLLPG 311 P PS+ A PAL + R G Sbjct: 429 PGQPSMGIDIASAPALQQYRTSAG 452 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 724,310,428 Number of extensions: 17147385 Number of successful extensions: 46065 Number of sequences better than 10.0: 44 Number of HSP's gapped: 45493 Number of HSP's successfully gapped: 49 Length of query: 1288 Length of database: 100,686,439 Length adjustment: 125 Effective length of query: 1163 Effective length of database: 66,399,564 Effective search space: 77222692932 Effective search space used: 77222692932 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
