ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf137i11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102928:Os04g0584900 | 361 | e-100 | 2 | AK058633:Os04g0584900 | 37 | 0.023 | 3 | Os11g0664800:Os11g0664800 | 32 | 0.95 | 4 | AK119496:Os02g0456000 | 30 | 2.8 | 5 | AK110398: | 30 | 3.6 | 6 | Os10g0476100:Os10g0476100 | 30 | 4.7 | 7 | Os02g0606100:Os02g0606100 | 30 | 4.7 | 8 | AK105412:Os01g0661000 | 30 | 4.7 | 9 | AK101958:Os01g0661000 | 30 | 4.7 | 10 | AK068654:Os11g0303800 | 30 | 4.7 | 11 | Os05g0573900:Os05g0573900 | 29 | 6.2 | 12 | U28047:Os03g0703000 | 29 | 8.0 | 13 | AK105026:Os03g0703000 | 29 | 8.0 | 14 | AK103027:Os03g0703000 | 29 | 8.0 | 15 | AK101120:Os05g0511400 | 29 | 8.0 | 16 | AK100913:Os02g0518800 | 29 | 8.0 | 17 | AK100165:Os03g0703000 | 29 | 8.0 | 18 | AK059920:Os03g0703000 | 29 | 8.0 |
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>AK102928:Os04g0584900 | Length = 319 Score = 361 bits (926), Expect = e-100 Identities = 186/291 (63%), Positives = 212/291 (72%), Gaps = 1/291 (0%) Frame = +3 Query: 150 LSAPVRLIPPRCFRGRPRWPRPIRASSGTSGAPDGERRIGALERRVGDLRALXXXXXXXX 329 +S R++PPR R R RWPRPIRASS SG +G+R++GALERRVGDLRA+ Sbjct: 8 VSLSFRVVPPRPCRRRARWPRPIRASSDGSGVANGDRKVGALERRVGDLRAVVASVPPAV 67 Query: 330 XXIRKNIGLSSVXXXXXXXXXXXXXXRQVVIRTQHQDNNGSVADLVRRGHLKSGQRGIAK 509 I+KNIGL+ + RQV+IR +DN GSVADL+RRG LKSGQRGIAK Sbjct: 68 AAIKKNIGLNFIAGFCLGITLLAAVARQVIIRIHERDNKGSVADLIRRGQLKSGQRGIAK 127 Query: 510 PRVYNDPFNNPLVKIDEGTSTAQMFGKEYRMAPVRLTNEQQTMHQKRRSHAYQWKRPTVF 689 PRVY+DPFNNPLVKIDE TSTAQ+FGKEYR+AP+RLT EQQ MHQKRRS YQWKRPTVF Sbjct: 128 PRVYDDPFNNPLVKIDEDTSTAQVFGKEYRLAPIRLTKEQQAMHQKRRSRTYQWKRPTVF 187 Query: 690 LKEGDPLPPDVDPETVRWIPVNHPFAAGSVEVDEETAKRNVYQKDGVPSRVKXXXXXXXX 869 LKEGD LPPDVDP+TVRWIPVNHPFAA S EVDEETAK+NVYQKDGVPSRVK Sbjct: 188 LKEGDSLPPDVDPDTVRWIPVNHPFAAASTEVDEETAKQNVYQKDGVPSRVKAEHEALQT 247 Query: 870 XXXXSNDVTPFSSSPRGVQHSARTSKL-SDEPFGNLQQSKPVMVNSQNGQP 1019 SN+V FSSS R +Q S R +L S+E G+ Q S V +QNGQP Sbjct: 248 RLEASNNVNKFSSSQRNMQLSDRQLRLSSNESSGSRQNSLSGTVKNQNGQP 298
>AK058633:Os04g0584900 | Length = 80 Score = 37.4 bits (85), Expect = 0.023 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +3 Query: 882 SNDVTPFSSSPRGVQHSARTSKLS-DEPFGNLQQSKPVMVNSQNGQP 1019 SN+V FSSS R +Q S R +LS +E G+ Q S V +QNGQP Sbjct: 13 SNNVNKFSSSQRNMQLSDRQLRLSSNESSGSRQNSLSGTVKNQNGQP 59
>Os11g0664800:Os11g0664800 | Length = 805 Score = 32.0 bits (71), Expect = 0.95 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = -3 Query: 320 GHRGDKRPQIPHPPLQSADPPLPVRGATRAARSPDWAGPPRP 195 G R R + P PPL A PPL R A++A S W P P Sbjct: 599 GRRNPSRRRRPTPPLTPASPPLE-RVASKAGGSRGWLRRPPP 639
>AK119496:Os02g0456000 | Length = 229 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -3 Query: 305 KRPQIPHPPLQSADPPLPVRGATRAARSPDWAGPPRPT 192 + P P P PP P R +T A R P P PT Sbjct: 30 RAPHAPMPRCPPTPPPTPPRPSTSATRPPSSPSAPSPT 67
>AK110398: | Length = 925 Score = 30.0 bits (66), Expect = 3.6 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -3 Query: 305 KRPQIPHPPLQSADPPLPVRGATRAARSPDWAGPPRP 195 K P H P +A PLP A A +P A PP P Sbjct: 818 KVPPAAHSPTPAAPSPLPAAAAATPAAAPVAATPPPP 854
>Os10g0476100:Os10g0476100 | Length = 606 Score = 29.6 bits (65), Expect = 4.7 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 11/101 (10%) Frame = +3 Query: 432 HQDNNGSVADLVRRGHLKSGQRGIAKPRVYNDPFNNPLVKIDEGTSTAQMF----GKEYR 599 H+D L R GHL+ G+ KP Y+ N P + + TST G++ Sbjct: 291 HRDIKPDNLLLDRHGHLRLSDFGLCKPLDYS---NFPDLNEKDVTSTKPQSTNGDGRQQS 347 Query: 600 MAPVRLTNEQQTMHQK-RRSHAY------QWKRPTVFLKEG 701 M P R EQ QK RR+ AY + P V LK+G Sbjct: 348 M-PKRTQQEQLEHWQKNRRTLAYSTVGTPDYIAPEVLLKKG 387
>Os02g0606100:Os02g0606100 | Length = 487 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 7/44 (15%) Frame = -3 Query: 302 RPQIPHPPLQSADPPL---PVRGATRAARSPD----WAGPPRPT 192 R PHP L + PP P R R R PD W+GPP PT Sbjct: 90 REHNPHPVLFAPFPPFVLRPPRSLPRV-REPDGFSVWSGPPYPT 132
>AK105412:Os01g0661000 | Length = 405 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 14/58 (24%) Frame = -3 Query: 326 SRGHRGD-------KRPQIPHPPLQSADPPLP-------VRGATRAARSPDWAGPPRP 195 S H GD + P P PP PPLP R A A +PD PP P Sbjct: 60 SPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSP 117
>AK101958:Os01g0661000 | Length = 405 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 14/58 (24%) Frame = -3 Query: 326 SRGHRGD-------KRPQIPHPPLQSADPPLP-------VRGATRAARSPDWAGPPRP 195 S H GD + P P PP PPLP R A A +PD PP P Sbjct: 60 SPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSP 117
>AK068654:Os11g0303800 | Length = 434 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = -3 Query: 329 NSRGHR--GDKRPQIPHPPLQSADPPLPVRGATRAARSPDWAGPPRPT 192 N RG + G KR P P +A PPLP A SP PP P+ Sbjct: 19 NKRGGKQLGLKRSSAPAPSPATAQPPLPASSPPEAP-SPATVQPPTPS 65
>Os05g0573900:Os05g0573900 | Length = 694 Score = 29.3 bits (64), Expect = 6.2 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Frame = -3 Query: 410 PCNSSQKCNAEAETSNGT*SNVFPDRDNSRGHRGD--KRPQIPHPPLQSADPPLP---VR 246 P NSS ++ + S + S+ D SR + K P IP PP PP+P Sbjct: 269 PANSSSSSSSSSAPSTPSCSS---DTAASRSRLPELSKLPPIPPPPPPPPPPPMPRSRSA 325 Query: 245 GATRAARSPDWAGPPRP 195 + + S AGPP P Sbjct: 326 SPSPSTSSSGSAGPPAP 342
>U28047:Os03g0703000 | Length = 504 Score = 28.9 bits (63), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 627 QQTMHQKRRSHAYQWKRPTVFLKEGDPLPPDVDPETVRWIP 749 QQ M Q S++ W+ VF K G P+ P + + +P Sbjct: 351 QQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 391
>AK105026:Os03g0703000 | Length = 504 Score = 28.9 bits (63), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 627 QQTMHQKRRSHAYQWKRPTVFLKEGDPLPPDVDPETVRWIP 749 QQ M Q S++ W+ VF K G P+ P + + +P Sbjct: 351 QQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 391
>AK103027:Os03g0703000 | Length = 504 Score = 28.9 bits (63), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 627 QQTMHQKRRSHAYQWKRPTVFLKEGDPLPPDVDPETVRWIP 749 QQ M Q S++ W+ VF K G P+ P + + +P Sbjct: 351 QQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 391
>AK101120:Os05g0511400 | Length = 556 Score = 28.9 bits (63), Expect = 8.0 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Frame = +3 Query: 432 HQDNNGSVADLVRRGHLKSGQRGIAKPRVYND--PFNNPLVKIDEGTSTAQMFGKEYRMA 605 H+D L R GHLK G+ KP ++ N P +GT + Sbjct: 237 HRDIKPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLNEPDYTSTKGTKPLPDSSSRLSSS 296 Query: 606 PVRLTNEQQTMH--QKRRSHAY------QWKRPTVFLKEG 701 ++ T ++Q H + RR AY + P V LK+G Sbjct: 297 ALKRTQQEQLSHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 336
>AK100913:Os02g0518800 | Length = 143 Score = 28.9 bits (63), Expect = 8.0 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -3 Query: 317 HRGDKRPQIPHPPLQSADPPLPVRGATRAARSPDWAGPPRP 195 HRG P +P PP PPL A+R P + P +P Sbjct: 59 HRGRPLPPLPPPPSPRCTPPL-------ASRCPPHSPPTKP 92
>AK100165:Os03g0703000 | Length = 504 Score = 28.9 bits (63), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 627 QQTMHQKRRSHAYQWKRPTVFLKEGDPLPPDVDPETVRWIP 749 QQ M Q S++ W+ VF K G P+ P + + +P Sbjct: 351 QQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 391
>AK059920:Os03g0703000 | Length = 350 Score = 28.9 bits (63), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 627 QQTMHQKRRSHAYQWKRPTVFLKEGDPLPPDVDPETVRWIP 749 QQ M Q S++ W+ VF K G P+ P + + +P Sbjct: 197 QQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 237 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,247,911 Number of extensions: 771274 Number of successful extensions: 2920 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2895 Number of HSP's successfully gapped: 18 Length of query: 420 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 317 Effective length of database: 11,275,632 Effective search space: 3574375344 Effective search space used: 3574375344 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
