ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132m12 |
|---|---|
| Clone Library Name | barley_pub |
>Q94C60:SPT42_ARATH Transcription elongation factor SPT4 homolog 2 - Arabidopsis| thaliana (Mouse-ear cress) Length = 116 Score = 182 bits (463), Expect = 8e-46 Identities = 82/110 (74%), Positives = 92/110 (83%) Frame = +2 Query: 155 AQIPNSFGHELRACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISL 334 AQIP SFGHELRACLRCRLVKTYDQFR+ GCENCPF M++D + +V TT NF GIIS+ Sbjct: 6 AQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 65 Query: 335 MDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 484 MDP+RSWAARWLRIG+F PGCYTLAVSE LPEE Q +CQ+ VQY PKR Sbjct: 66 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKR 115
>Q8LCQ3:SPT41_ARATH Transcription elongation factor SPT4 homolog 1 - Arabidopsis| thaliana (Mouse-ear cress) Length = 116 Score = 182 bits (462), Expect = 1e-45 Identities = 82/110 (74%), Positives = 91/110 (82%) Frame = +2 Query: 155 AQIPNSFGHELRACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISL 334 AQIP SFGHELRACLRCRLVKTYDQFR++GCENCPF ++ D + +V TT NF GIIS+ Sbjct: 6 AQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFDGIISM 65 Query: 335 MDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 484 MDP RSWAARWLRIG+F PGCYTLAVSE LPEE Q +CQ VQY PPKR Sbjct: 66 MDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKR 115
>Q6DGQ0:SPT4H_DANRE Transcription elongation factor SPT4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 117 Score = 95.1 bits (235), Expect = 2e-19 Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F G+I++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELP 427 P SW A+W RIG F PG Y + V+ LP Sbjct: 65 SPEDSWVAKWQRIGNFKPGVYAVTVTGRLP 94
>Q9TVQ5:SPT4H_DROME Transcription elongation factor SPT4 - Drosophila melanogaster| (Fruit fly) Length = 116 Score = 94.7 bits (234), Expect = 3e-19 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Frame = +2 Query: 185 LRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAA 361 LRACL C LVK++DQF +GCENC FL M ++DNV T+ NF GII+L PT SW A Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72 Query: 362 RWLRIGRFIPGCYTLAVSEELPE 430 +W R+ RF G Y ++VS LP+ Sbjct: 73 KWQRLSRFTRGIYAISVSGTLPQ 95
>Q7S743:SPT4_NEUCR Transcription elongation factor spt-4 - Neurospora crassa| Length = 120 Score = 93.6 bits (231), Expect = 6e-19 Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Frame = +2 Query: 185 LRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAA 361 LRAC+ C +V TY +FR+ GC NC FL + D + SCT+ F GII++ +P +SW A Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANPQKSWVA 73 Query: 362 RWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFP 475 +W R+ ++ G Y VS +LP++ + +D+ +QY P Sbjct: 74 KWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIP 111
>Q4R941:SPT4H_MACFA Transcription elongation factor SPT4 - Macaca fascicularis (Crab| eating macaque) (Cynomolgus monkey) Length = 117 Score = 93.2 bits (230), Expect = 8e-19 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GII++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>P63272:SPT4H_HUMAN Transcription elongation factor SPT4 - Homo sapiens (Human)| Length = 117 Score = 93.2 bits (230), Expect = 8e-19 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GII++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>Q3SYX6:SPT4H_BOVIN Transcription elongation factor SPT4 - Bos taurus (Bovine)| Length = 117 Score = 93.2 bits (230), Expect = 8e-19 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GII++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>P63271:SPT41_MOUSE Transcription elongation factor SPT4 1 - Mus musculus (Mouse)| Length = 117 Score = 93.2 bits (230), Expect = 8e-19 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GII++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>Q5RFH5:SPT4H_PONPY Transcription elongation factor SPT4 - Pongo pygmaeus (Orangutan)| Length = 117 Score = 92.8 bits (229), Expect = 1e-18 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GII++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPGDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>Q5HZ97:SPT4H_XENLA Transcription elongation factor SPT4 - Xenopus laevis (African| clawed frog) Length = 117 Score = 92.0 bits (227), Expect = 2e-18 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GI+++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIVAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPE 430 P SW ++W RI F PG Y ++V+ LP+ Sbjct: 65 SPDDSWVSKWQRITNFKPGVYAVSVTGRLPQ 95
>Q9Z199:SPT42_MOUSE Transcription elongation factor SPT4 2 - Mus musculus (Mouse)| Length = 117 Score = 90.5 bits (223), Expect = 5e-18 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 161 IPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLM 337 +P H LRACL C LVKT DQF +GC+NC +L M +R+ V CT+++F GI ++M Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGINAMM 64 Query: 338 DPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 P SW ++W R+ F PG Y ++V+ LP+ + V Y Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>Q4WU00:SPT4_ASPFU Transcription elongation factor spt4 - Aspergillus fumigatus| (Sartorya fumigata) Length = 156 Score = 82.8 bits (203), Expect = 1e-15 Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Frame = +2 Query: 185 LRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAA 361 LRAC+ C LV+ + +F +GC NC L + + D + CT+ F G+I+L DP+ SW A Sbjct: 15 LRACMVCSLVQLHSKFMRDGCPNCDNVLGLRGNNDAIQECTSQVFEGLITLRDPSTSWVA 74 Query: 362 RWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFP 475 RW R+ ++ G Y + V+ LP++ +D+ V+Y P Sbjct: 75 RWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVRYIP 112
>Q9TZ93:SPT4H_CAEEL Transcription elongation factor SPT4 - Caenorhabditis elegans| Length = 120 Score = 82.8 bits (203), Expect = 1e-15 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Frame = +2 Query: 185 LRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAA 361 LRACL C LVK+ + F++ GCENC L + D + V CT+AN+ G+I+ M SW Sbjct: 12 LRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIAAMSNNESWVC 71 Query: 362 RWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 484 +W ++ R + G Y ++VS LP + V+Y P +R Sbjct: 72 KWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQR 112
>Q628A6:SPT4H_CAEBR Transcription elongation factor SPT4 - Caenorhabditis briggsae| Length = 120 Score = 81.3 bits (199), Expect = 3e-15 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Frame = +2 Query: 155 AQIPNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIIS 331 A IP+ LRACL C L+K+ D F+ +GCENC L + D + V CT+AN+ G+I+ Sbjct: 3 ASIPSDL-RNLRACLLCSLIKSVDAFQTDGCENCDEVLHLKGDEEKVYDCTSANYDGMIA 61 Query: 332 LMDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQY 469 M SW +W ++ R + G Y ++VS LP + V+Y Sbjct: 62 AMSNDDSWVCKWQKMQRRVKGIYAISVSGSLPSNVVSDLKSMGVRY 107
>P81205:SPT4_KLULA Transcription elongation factor SPT4 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 102 Score = 75.5 bits (184), Expect = 2e-13 Identities = 32/82 (39%), Positives = 50/82 (60%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARW 367 RAC+ C LV++ +F NGC NC + ++ + V CT+ +F G++ + P+RSW ARW Sbjct: 5 RACMLCGLVQSTAEFNRNGCPNCQSI-FEEAGVSAVECTSPSFEGLVGMCKPSRSWVARW 63 Query: 368 LRIGRFIPGCYTLAVSEELPEE 433 + I +IPG Y + + LP E Sbjct: 64 MSIDSYIPGMYAVKIDGRLPIE 85
>Q4I5W5:SPT4_GIBZE Transcription elongation factor SPT4 - Gibberella zeae (Fusarium| graminearum) Length = 99 Score = 75.5 bits (184), Expect = 2e-13 Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 2/88 (2%) Frame = +2 Query: 218 TYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARWLRIGRFIPG 394 T +F+ GC NC FL + D + SCT+ F G+I+L +PT+SW A++ R+ ++PG Sbjct: 2 TSQRFQNEGCPNCEEFLHLQHSPDQIESCTSQVFEGVITLANPTKSWIAKYQRLDSYVPG 61 Query: 395 CYTLAVSEELPEEYQGMCQDN-NVQYFP 475 Y + VS +LP++ + +D +QY P Sbjct: 62 MYAIKVSGQLPDDVRSTLEDEYRIQYIP 89
>Q6BHA5:SPT4_DEBHA Transcription elongation factor SPT4 - Debaryomyces hansenii| (Yeast) (Torulaspora hansenii) Length = 112 Score = 75.5 bits (184), Expect = 2e-13 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFL--DMDKDRDNVVSCTTANFTGIISLMDPTR-SWA 358 RAC+ C +++ + +F + GC NC + D + + V CT+ +F G+++L D + SW Sbjct: 7 RACMLCGIIQPFRKFVDFGCPNCESVLHFQDNEDNQVQDCTSPSFEGLVALGDDNKKSWV 66 Query: 359 ARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFP 475 ARWLRI F+ G Y + ++ +LP G D N+ Y P Sbjct: 67 ARWLRIDSFVAGLYAVKINGKLPPHIIGDLADQNISYRP 105
>Q752J8:SPT4_ASHGO Transcription elongation factor SPT4 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 102 Score = 75.1 bits (183), Expect = 2e-13 Identities = 33/106 (31%), Positives = 60/106 (56%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARW 367 RAC+ C +V+T ++F +GC NC + ++ + + CT+ +F G++ + PT+SW A+W Sbjct: 5 RACMLCGIVQTTNEFTRDGCPNCQGI-FEEASVSAIECTSPSFEGLVGMCKPTKSWVAKW 63 Query: 368 LRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKRP*AGSKL 505 + + +++PG Y + V LP E V P +P GS++ Sbjct: 64 ISVEQYVPGMYAIKVDGRLPVEV--------VDLLPHYKPRDGSQV 101
>Q5KB83:SPT4_CRYNE Transcription elongation factor SPT4 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 113 Score = 72.8 bits (177), Expect = 1e-12 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%) Frame = +2 Query: 164 PNSFGHELRACLRCRLVKTYDQFRENGCENCP-FLDMDKDRDNVVSCTTANFTGIISLMD 340 P S ELRACL C ++++ + F GC NC L+M + V CT+ + G+I++++ Sbjct: 3 PKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAMIE 62 Query: 341 PTRSWAARWLRIGRFIPGCYTLAVSEELPEE 433 P+ SW ARW RI + + G Y + V+ P++ Sbjct: 63 PSESWVARWQRIDKRMRGIYAVRVTGRAPQD 93
>P32914:SPT4_YEAST Transcription elongation factor SPT4 - Saccharomyces cerevisiae| (Baker's yeast) Length = 102 Score = 71.6 bits (174), Expect = 2e-12 Identities = 34/106 (32%), Positives = 58/106 (54%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARW 367 RAC+ C +V+T ++F +GC NC + ++ + + CT+ +F G++ + PT+SW A+W Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63 Query: 368 LRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKRP*AGSKL 505 L + I G Y + V LP E V+ P +P GS++ Sbjct: 64 LSVDHSIAGMYAIKVDGRLPAEV--------VELLPHYKPRDGSQV 101
>Q6FMX1:SPT4_CANGA Transcription elongation factor SPT4 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 102 Score = 71.2 bits (173), Expect = 3e-12 Identities = 35/106 (33%), Positives = 58/106 (54%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARW 367 RAC+ C +V+T ++F GC NC + ++ + + CT+ +F G++ + PT+SW A+W Sbjct: 5 RACMLCGIVQTTNEFGRVGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63 Query: 368 LRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKRP*AGSKL 505 L + IPG Y + V LP E V+ P +P GS++ Sbjct: 64 LSVDANIPGMYAVKVDGRLPPEV--------VELLPHYKPRDGSQV 101
>Q5AK73:SPT4_CANAL Transcription elongation factor SPT4 - Candida albicans (Yeast)| Length = 112 Score = 68.6 bits (166), Expect = 2e-11 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 3/99 (3%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDN--VVSCTTANFTGIISLMDPTR-SWA 358 RAC+ C +++ F + GC NC L + DN V CT+ +F G+++L + + SW Sbjct: 7 RACMLCGIIQPMKSFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWV 66 Query: 359 ARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFP 475 ARWLRI F G Y + V+ +LP ++ NV Y P Sbjct: 67 ARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105
>Q9P7K8:SPT4_SCHPO Transcription elongation factor spt4 - Schizosaccharomyces pombe| (Fission yeast) Length = 105 Score = 63.9 bits (154), Expect = 5e-10 Identities = 35/96 (36%), Positives = 46/96 (47%) Frame = +2 Query: 188 RACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISLMDPTRSWAARW 367 RACL C +V + F GC N D+V + T+ F GI+++M PT SW ARW Sbjct: 10 RACLICGIVLPHSVFANKGCPN-------DGVDDVETFTSPVFEGIMAMMSPTESWVARW 62 Query: 368 LRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFP 475 RI F PG Y V L E+ + + Y P Sbjct: 63 QRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRP 98
>Q8UVC1:INVS_DANRE Inversin - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 1021 Score = 36.2 bits (82), Expect = 0.12 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Frame = -1 Query: 632 MSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAWEGN----- 468 M+PG + D++ + A HW F H V+L +K+ S I + ++ W + Sbjct: 130 MAPGEVDTQDRNKQTALHWSAFYNHPEHVKLLIKHDSNIGIPDSEGKIPLHWAAHNKHPN 189 Query: 467 ---TARCCL 450 T RC L Sbjct: 190 ATRTVRCIL 198
>Q9Y283:INVS_HUMAN Inversin - Homo sapiens (Human)| Length = 1065 Score = 35.8 bits (81), Expect = 0.15 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Frame = -1 Query: 656 CDELVQLKMSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 C L+ M+PG + DK+ + A HW + + V+L +K+ S I ++ W Sbjct: 129 CLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHW 188 Query: 476 EGN--------TARCCL 450 N T RC L Sbjct: 189 AANHKDPSAVHTVRCIL 205
>Q6JAN1:INVS_CANFA Inversin - Canis familiaris (Dog)| Length = 1081 Score = 35.8 bits (81), Expect = 0.15 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Frame = -1 Query: 656 CDELVQLKMSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 C L+ M+PG + DK+ + A HW + + V+L +K+ S I ++ W Sbjct: 129 CLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHW 188 Query: 476 EGN--------TARCCL 450 N T RC L Sbjct: 189 AANHKDPSAVHTVRCIL 205
>Q71S22:INVSA_XENLA Inversin-A - Xenopus laevis (African clawed frog)| Length = 1007 Score = 35.0 bits (79), Expect = 0.26 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Frame = -1 Query: 656 CDELVQLKMSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 C L+ PG+ +A D+ + A HW + V+L V++GS I T ++ W Sbjct: 125 CLALILKYTPPGQVDAQDQRKQTALHWSAYYNRPRHVRLLVRHGSNIGIPDTEGKIPLHW 184 Query: 476 EGN--------TARCCL 450 T RC L Sbjct: 185 AAGHKDPEAALTVRCLL 201
>O89019:INVS_MOUSE Inversin - Mus musculus (Mouse)| Length = 1062 Score = 34.3 bits (77), Expect = 0.44 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Frame = -1 Query: 656 CDELVQLKMSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 C L+ M+PG + DK+ + A HW + + +L +K+ S I ++ W Sbjct: 129 CLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHAKLLIKHDSNIGIPDVEGKIPLHW 188 Query: 476 EGN--------TARCCL 450 N T RC L Sbjct: 189 AANHKDPSAVHTVRCIL 205
>Q8UVC3:INVS_CHICK Inversin - Gallus gallus (Chicken)| Length = 1106 Score = 33.9 bits (76), Expect = 0.57 Identities = 16/63 (25%), Positives = 29/63 (46%) Frame = -1 Query: 656 CDELVQLKMSPGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 C L+ M+PG + D++ + A HW + + V+L +K+ S I ++ W Sbjct: 129 CLALLLKHMAPGEVDTQDRNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDIEGKIPLHW 188 Query: 476 EGN 468 N Sbjct: 189 AAN 191
>Q53684:YOE2_STRAT Hypothetical 48.5 kDa protein in oleD 5'region precursor -| Streptomyces antibioticus Length = 451 Score = 33.1 bits (74), Expect = 0.97 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -1 Query: 509 ASTSSQLRGAWEGNTARCCLGTSLDTPPEVP 417 AST + +R AW G C TS D PP VP Sbjct: 403 ASTLADVRHAWSGTATWCWPATSADPPPGVP 433
>Q71S21:INVSB_XENLA Inversin-B - Xenopus laevis (African clawed frog)| Length = 1002 Score = 33.1 bits (74), Expect = 0.97 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 Query: 626 PGRTEAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSSQLRGAW 477 PG+ +A D+ + A HW + V+L V++GS I T ++ W Sbjct: 135 PGQVDAQDQRKQTALHWSAYYNRPQHVRLLVRHGSNIGIPDTEGKIPLHW 184
>Q505D1:ANR28_MOUSE Ankyrin repeat domain-containing protein 28 - Mus musculus (Mouse)| Length = 1053 Score = 33.1 bits (74), Expect = 0.97 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 650 ELVQLKMSPGRT-EAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSS 495 E+V+L +S G AFDK A HW + H V+L V +G+ +T S Sbjct: 154 EMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKS 206
>O15084:ANR28_HUMAN Ankyrin repeat domain-containing protein 28 - Homo sapiens (Human)| Length = 1086 Score = 33.1 bits (74), Expect = 0.97 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 650 ELVQLKMSPGRT-EAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRITTASTSS 495 E+V+L +S G AFDK A HW + H V+L V +G+ +T S Sbjct: 187 EMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKS 239
>Q9SJF0:BSL2_ARATH Serine/threonine-protein phosphatase BSL2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1088 Score = 30.4 bits (67), Expect = 6.3 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 LMDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQ 466 + DPT + + LR PG T VS LP+ C +N++Q Sbjct: 938 MSDPTENDSVEGLRPNARGPGLVTFGVSNFLPDRVMEFCNNNDLQ 982
>Q5F478:ANR44_CHICK Ankyrin repeat domain-containing protein 44 - Gallus gallus| (Chicken) Length = 990 Score = 30.4 bits (67), Expect = 6.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 650 ELVQLKMSPGRT-EAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRIT 513 E+V L ++ G AFDK A HW + H V L + +G+ +T Sbjct: 154 EMVNLLLAKGANINAFDKKDRRALHWAAYMGHLEVVALLINHGAEVT 200
>O31423:YBCP_BACSU Uncharacterized protein ybcP - Bacillus subtilis| Length = 410 Score = 30.0 bits (66), Expect = 8.2 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%) Frame = +1 Query: 520 LDPYFTYSCTC---NVC*LNCRQCYASS 594 LD Y SCT N C L+C CYASS Sbjct: 101 LDSYLPISCTLQLTNACNLSCSFCYASS 128
>Q8N8A2:ANR44_HUMAN Ankyrin repeat domain-containing protein 44 - Homo sapiens (Human)| Length = 944 Score = 30.0 bits (66), Expect = 8.2 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 650 ELVQLKMSPGRT-EAFDKSLEDA*HWRQFNQHTLQVQLYVKYGSRIT 513 E+V L ++ G AFDK A HW + H V L + +G+ +T Sbjct: 154 EMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVT 200 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 90,207,118 Number of extensions: 1766990 Number of successful extensions: 4679 Number of sequences better than 10.0: 38 Number of HSP's gapped: 4658 Number of HSP's successfully gapped: 38 Length of query: 224 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 115 Effective length of database: 70,788,284 Effective search space: 8140652660 Effective search space used: 8140652660 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
