| Clone Name | FLbaf130b18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059837.1| Oryza sativa (japonica cultivar-group) Os04g0513100 (Os04g0513100) mRNA, complete cds Length = 1960 Score = 414 bits (209), Expect = e-112 Identities = 716/885 (80%) Strand = Plus / Plus Query: 737 ctcctggtcattgttcgaagccgtttgggaattgtgcctttggaaattcttcaatcgagc 796 ||||||||| |||||| | || |||||||| |||||||| || ||||||||||| |||| Sbjct: 862 ctcctggtcgttgttctgaaccatttgggaagtgtgccttagggaattcttcaatagagc 921 Query: 797 catacatagtaggtcacaatatgatactttcacatgcaaacgcagtgagcatttacagaa 856 ||||| ||| |||||||||||| ||||| || |||||||| ||||| ||| ||||||||| Sbjct: 922 catacgtagcaggtcacaatatcatactgtcgcatgcaaatgcagtcagcgtttacagaa 981 Query: 857 ataactatcaggaggcacaaggtggatatattggaattgctgtcggcgcaagatggtatg 916 | || ||||||| ||||||||| | |||||||||||| | || || ||||||| Sbjct: 982 acaaatatcagggaaaacaaggtggtcagattggaattgctttgagcataacctggtatg 1041 Query: 917 aaccattgcgaaataccacaatcgaccaactagcagttgaacgggctatatctttcaatg 976 ||||||| || |||||||| || || | | || ||| | ||||| |||||||| || Sbjct: 1042 aaccattccggaataccactatagatctcttggcggttaagagggctctatctttcggtg 1101 Query: 977 ttccatggtttctggaccctataattcttggtgattatcctgcagagatgcgcaaaatct 1036 | |||||||| | ||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 1102 cttcatggtttttagaccctatacttcttggtgattatcccacagagatgcgtgaagtct 1161 Query: 1037 tgggcccaaccctacctgagttcacatcaaagcagaagaagaaactacatgcaacaaaac 1096 |||| | || |||||| ||||||||||||| || ||||| | ||| || |||||| Sbjct: 1162 tgggtcaaagcctacccaagttcacatcaaaacaaaagaacagactgcagagcacaaaat 1221 Query: 1097 tggattttattggactaaatcattattcgacatggtatttgaaagactgcatcttttcat 1156 |||||||||| |||||||| ||||| ||||||| ||| |||| || |||||||| ||| Sbjct: 1222 tggattttatcggactaaaccattacacgacatgttatgtgaaggattgcatcttctcac 1281 Query: 1157 catgtgaaatggatcctatggatggggatgcgcgagcactgagtttagcagaaagagatg 1216 | |||||||| |||||| | ||| ||||| |||| | | |||||| ||||| |||| Sbjct: 1282 cgtgtgaaattgatcctgttaatgcagatgcacgagtatttagtttatacgaaagggatg 1341 Query: 1217 gtgtgcttatcggtaaacagacaggagcaccattcttttatgatgttccacatgggatgg 1276 | |||| ||||||||| ||||||||| ||||||||| |||| ||||||| ||||||| Sbjct: 1342 gagtgcccatcggtaaagcgacaggagcgccattctttcatgacgttccacgagggatgg 1401 Query: 1277 aaaaggtggtcatgtattacaaacaaagatacaacaacacggcaacatatataacagaaa 1336 || | | |||| || || |||||||||||||||||||| |||||||||| || |||| Sbjct: 1402 aagaagcagtcacatactataaacaaagatacaacaacacaccaacatatatcactgaaa 1461 Query: 1337 atggttatgctcaagcaagcaatagcagtatgactgctaaggattttaccggcgacacag 1396 ||||||| | |||||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 1462 atggttactcccaagcaagcaatagcaacatgactgccaaggattttaccaacgacacag 1521 Query: 1397 aaagaattaattacatcagtggctacctcacttatttagcctcggcaataaggaaaggag 1456 |||||||| ||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 1522 gaagaattacctacattcaaggctacctcatttccttagcctcggcaataaggaaaggag 1581 Query: 1457 ctgacgtacgtggttactttgtgtggtctctcctcgacgactttgagtggacttcgggat 1516 |||| |||||||| |||||||| ||||||||||| || ||||| ||||||| || |||| Sbjct: 1582 ctgatgtacgtggctactttgtatggtctctccttgatgacttcgagtggaattttggat 1641 Query: 1517 acaaggacagattcgggctctaccatgtcgacttcaagacgcagaagaggatgccaaaac 1576 ||| | || |||||||||||||||||| ||| |||||| | |||||||| ||||||| Sbjct: 1642 acacgttaaggttcgggctctaccatgtccactacaagacactgaagaggacgccaaaat 1701 Query: 1577 tatcagctgaatggttcaggcagttcctcaaaggttcacttctga 1621 | || | || |||| |||| ||||||||| |||||||| |||| Sbjct: 1702 tgtcggtagattggtacaggaagttcctcacgggttcactgctga 1746 Score = 331 bits (167), Expect = 5e-87 Identities = 389/463 (84%) Strand = Plus / Plus Query: 216 cttcctctttgggacatccacctctgcctaccagattgaaggcggatatttggagggtaa 275 ||||||||||||||| || | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 341 cttcctctttgggacctcttcttctgcttaccaggttgaaggcggatatttggagggtaa 400 Query: 276 gaaaggcctaagtaattgggatgtctacacccacaaggaaggcacaattgaggatggaag 335 ||||| || || || |||||||||| ||| || ||| |||| ||||||||||||||||| Sbjct: 401 caaaggtctcagcaactgggatgtcttcactcataagcaaggtacaattgaggatggaag 460 Query: 336 taacggcgatattgctgctgatcattaccatcgttacatggaagatattgagttgatgca 395 || ||||||| ||| ||| || || || ||||||||||||||||||||||||||||| Sbjct: 461 caatggcgatacagctaatgaccactatcaccgttacatggaagatattgagttgatgca 520 Query: 396 ttccttgggagtgaactcatatcgattctccatagcatggacacgaattctaccaagagg 455 |||||||| || ||||| || | ||||||||| ||||| || | |||||||||| || Sbjct: 521 ctccttgggtgtcaactcgtacaggttctccatatcatgggcaaggattctaccaaaggg 580 Query: 456 ccgatttggacatataaatccagacggtgtaccattctacaatgccatcatcaatgctct 515 || |||||| || | ||||| || |||||| |||||||||| ||| | || ||| ||| Sbjct: 581 tcggtttggagatgttaatccggatggtgtagcattctacaacgcccttattgatggtct 640 Query: 516 tctgcagaaaggcatacaaccatttgttacgatatttcattacgacattccacatgagct 575 | | |||||||| ||||| ||||||||||| |||| || || || || |||||||| || Sbjct: 641 tgtacagaaaggaatacagccatttgttacaatatgccactatgatatcccacatgaact 700 Query: 576 tgaagagcgatatggtggatggttgagtccagaaatccagaaggactttggttactttgc 635 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 701 ggacgagcgatatggtggatggttgagtccagaaatccagaaggacttcagttactttgc 760 Query: 636 aaaagtatgcttcaagttgtttggcgaccgagtgaaattctgg 678 | |||||||||||||| ||||||| |||||| | ||||||||| Sbjct: 761 agaagtatgcttcaagctgtttggtgaccgaataaaattctgg 803
>dbj|AK067841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128A11, full insert sequence Length = 1962 Score = 414 bits (209), Expect = e-112 Identities = 716/885 (80%) Strand = Plus / Plus Query: 737 ctcctggtcattgttcgaagccgtttgggaattgtgcctttggaaattcttcaatcgagc 796 ||||||||| |||||| | || |||||||| |||||||| || ||||||||||| |||| Sbjct: 864 ctcctggtcgttgttctgaaccatttgggaagtgtgccttagggaattcttcaatagagc 923 Query: 797 catacatagtaggtcacaatatgatactttcacatgcaaacgcagtgagcatttacagaa 856 ||||| ||| |||||||||||| ||||| || |||||||| ||||| ||| ||||||||| Sbjct: 924 catacgtagcaggtcacaatatcatactgtcgcatgcaaatgcagtcagcgtttacagaa 983 Query: 857 ataactatcaggaggcacaaggtggatatattggaattgctgtcggcgcaagatggtatg 916 | || ||||||| ||||||||| | |||||||||||| | || || ||||||| Sbjct: 984 acaaatatcagggaaaacaaggtggtcagattggaattgctttgagcataacctggtatg 1043 Query: 917 aaccattgcgaaataccacaatcgaccaactagcagttgaacgggctatatctttcaatg 976 ||||||| || |||||||| || || | | || ||| | ||||| |||||||| || Sbjct: 1044 aaccattccggaataccactatagatctcttggcggttaagagggctctatctttcggtg 1103 Query: 977 ttccatggtttctggaccctataattcttggtgattatcctgcagagatgcgcaaaatct 1036 | |||||||| | ||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 1104 cttcatggtttttagaccctatacttcttggtgattatcccacagagatgcgtgaagtct 1163 Query: 1037 tgggcccaaccctacctgagttcacatcaaagcagaagaagaaactacatgcaacaaaac 1096 |||| | || |||||| ||||||||||||| || ||||| | ||| || |||||| Sbjct: 1164 tgggtcaaagcctacccaagttcacatcaaaacaaaagaacagactgcagagcacaaaat 1223 Query: 1097 tggattttattggactaaatcattattcgacatggtatttgaaagactgcatcttttcat 1156 |||||||||| |||||||| ||||| ||||||| ||| |||| || |||||||| ||| Sbjct: 1224 tggattttatcggactaaaccattacacgacatgttatgtgaaggattgcatcttctcac 1283 Query: 1157 catgtgaaatggatcctatggatggggatgcgcgagcactgagtttagcagaaagagatg 1216 | |||||||| |||||| | ||| ||||| |||| | | |||||| ||||| |||| Sbjct: 1284 cgtgtgaaattgatcctgttaatgcagatgcacgagtatttagtttatacgaaagggatg 1343 Query: 1217 gtgtgcttatcggtaaacagacaggagcaccattcttttatgatgttccacatgggatgg 1276 | |||| ||||||||| ||||||||| ||||||||| |||| ||||||| ||||||| Sbjct: 1344 gagtgcccatcggtaaagcgacaggagcgccattctttcatgacgttccacgagggatgg 1403 Query: 1277 aaaaggtggtcatgtattacaaacaaagatacaacaacacggcaacatatataacagaaa 1336 || | | |||| || || |||||||||||||||||||| |||||||||| || |||| Sbjct: 1404 aagaagcagtcacatactataaacaaagatacaacaacacaccaacatatatcactgaaa 1463 Query: 1337 atggttatgctcaagcaagcaatagcagtatgactgctaaggattttaccggcgacacag 1396 ||||||| | |||||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 1464 atggttactcccaagcaagcaatagcaacatgactgccaaggattttaccaacgacacag 1523 Query: 1397 aaagaattaattacatcagtggctacctcacttatttagcctcggcaataaggaaaggag 1456 |||||||| ||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 1524 gaagaattacctacattcaaggctacctcatttccttagcctcggcaataaggaaaggag 1583 Query: 1457 ctgacgtacgtggttactttgtgtggtctctcctcgacgactttgagtggacttcgggat 1516 |||| |||||||| |||||||| ||||||||||| || ||||| ||||||| || |||| Sbjct: 1584 ctgatgtacgtggctactttgtatggtctctccttgatgacttcgagtggaattttggat 1643 Query: 1517 acaaggacagattcgggctctaccatgtcgacttcaagacgcagaagaggatgccaaaac 1576 ||| | || |||||||||||||||||| ||| |||||| | |||||||| ||||||| Sbjct: 1644 acacgttaaggttcgggctctaccatgtccactacaagacactgaagaggacgccaaaat 1703 Query: 1577 tatcagctgaatggttcaggcagttcctcaaaggttcacttctga 1621 | || | || |||| |||| ||||||||| |||||||| |||| Sbjct: 1704 tgtcggtagattggtacaggaagttcctcacgggttcactgctga 1748 Score = 331 bits (167), Expect = 5e-87 Identities = 389/463 (84%) Strand = Plus / Plus Query: 216 cttcctctttgggacatccacctctgcctaccagattgaaggcggatatttggagggtaa 275 ||||||||||||||| || | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 343 cttcctctttgggacctcttcttctgcttaccaggttgaaggcggatatttggagggtaa 402 Query: 276 gaaaggcctaagtaattgggatgtctacacccacaaggaaggcacaattgaggatggaag 335 ||||| || || || |||||||||| ||| || ||| |||| ||||||||||||||||| Sbjct: 403 caaaggtctcagcaactgggatgtcttcactcataagcaaggtacaattgaggatggaag 462 Query: 336 taacggcgatattgctgctgatcattaccatcgttacatggaagatattgagttgatgca 395 || ||||||| ||| ||| || || || ||||||||||||||||||||||||||||| Sbjct: 463 caatggcgatacagctaatgaccactatcaccgttacatggaagatattgagttgatgca 522 Query: 396 ttccttgggagtgaactcatatcgattctccatagcatggacacgaattctaccaagagg 455 |||||||| || ||||| || | ||||||||| ||||| || | |||||||||| || Sbjct: 523 ctccttgggtgtcaactcgtacaggttctccatatcatgggcaaggattctaccaaaggg 582 Query: 456 ccgatttggacatataaatccagacggtgtaccattctacaatgccatcatcaatgctct 515 || |||||| || | ||||| || |||||| |||||||||| ||| | || ||| ||| Sbjct: 583 tcggtttggagatgttaatccggatggtgtagcattctacaacgcccttattgatggtct 642 Query: 516 tctgcagaaaggcatacaaccatttgttacgatatttcattacgacattccacatgagct 575 | | |||||||| ||||| ||||||||||| |||| || || || || |||||||| || Sbjct: 643 tgtacagaaaggaatacagccatttgttacaatatgccactatgatatcccacatgaact 702 Query: 576 tgaagagcgatatggtggatggttgagtccagaaatccagaaggactttggttactttgc 635 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 703 ggacgagcgatatggtggatggttgagtccagaaatccagaaggacttcagttactttgc 762 Query: 636 aaaagtatgcttcaagttgtttggcgaccgagtgaaattctgg 678 | |||||||||||||| ||||||| |||||| | ||||||||| Sbjct: 763 agaagtatgcttcaagctgtttggtgaccgaataaaattctgg 805
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 111 bits (56), Expect = 9e-21 Identities = 146/176 (82%) Strand = Plus / Minus Query: 1446 aaggaaaggagctgacgtacgtggttactttgtgtggtctctcctcgacgactttgagtg 1505 ||||||||||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 25614152 aaggaaaggagctgatgtacgtggctactttgtatggtctctccttgatgacttcgagtg 25614093 Query: 1506 gacttcgggatacaaggacagattcgggctctaccatgtcgacttcaagacgcagaagag 1565 || || ||||||| | || |||||||||||||||||| ||| |||||| | |||||| Sbjct: 25614092 gaattttggatacacgttaaggttcgggctctaccatgtccactacaagacactgaagag 25614033 Query: 1566 gatgccaaaactatcagctgaatggttcaggcagttcctcaaaggttcacttctga 1621 || ||||||| | || | || |||| |||| ||||||||| |||||||| |||| Sbjct: 25614032 gacgccaaaattgtcggtagattggtacaggaagttcctcacgggttcactgctga 25613977 Score = 111 bits (56), Expect = 9e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 737 ctcctggtcattgttcgaagccgtttgggaattgtgcctttggaaattcttcaatcgagc 796 ||||||||| |||||| | || |||||||| |||||||| || ||||||||||| |||| Sbjct: 25616540 ctcctggtcgttgttctgaaccatttgggaagtgtgccttagggaattcttcaatagagc 25616481 Query: 797 catacatagtaggtcacaatatgatactttcacatgcaaacgcagtgagcatttacagaa 856 ||||| ||| |||||||||||| ||||| || |||||||| ||||| ||| ||||||||| Sbjct: 25616480 catacgtagcaggtcacaatatcatactgtcgcatgcaaatgcagtcagcgtttacagaa 25616421 Query: 857 ataactatcagg 868 | || ||||||| Sbjct: 25616420 acaaatatcagg 25616409 Score = 101 bits (51), Expect = 9e-18 Identities = 150/183 (81%) Strand = Plus / Minus Query: 991 gaccctataattcttggtgattatcctgcagagatgcgcaaaatcttgggcccaacccta 1050 ||||||||| |||||||||||||||| |||||||||| || ||||||| | || |||| Sbjct: 25615809 gaccctatacttcttggtgattatcccacagagatgcgtgaagtcttgggtcaaagccta 25615750 Query: 1051 cctgagttcacatcaaagcagaagaagaaactacatgcaacaaaactggattttattgga 1110 || ||||||||||||| || ||||| | ||| || |||||| |||||||||| ||| Sbjct: 25615749 cccaagttcacatcaaaacaaaagaacagactgcagagcacaaaattggattttatcgga 25615690 Query: 1111 ctaaatcattattcgacatggtatttgaaagactgcatcttttcatcatgtgaaatggat 1170 ||||| ||||| ||||||| ||| |||| || |||||||| ||| | |||||||| ||| Sbjct: 25615689 ctaaaccattacacgacatgttatgtgaaggattgcatcttctcaccgtgtgaaattgat 25615630 Query: 1171 cct 1173 ||| Sbjct: 25615629 cct 25615627 Score = 85.7 bits (43), Expect = 5e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 1231 aaacagacaggagcaccattcttttatgatgttccacatgggatggaaaaggtggtcatg 1290 |||||||||||||| ||||||||| |||| ||||||| ||||||||| | | |||| Sbjct: 25615475 aaacagacaggagcgccattctttcatgacgttccacgagggatggaagaagcagtcaca 25615416 Query: 1291 tattacaaacaaagatacaacaacacggcaacatatataacagaaaatggt 1341 || || |||||||||||||||||||| |||||||||| || ||||||||| Sbjct: 25615415 tactataaacaaagatacaacaacacaccaacatatatcactgaaaatggt 25615365 Score = 85.7 bits (43), Expect = 5e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 529 atacaaccatttgttacgatatttcattacgacattccacatgagcttgaagagcgatat 588 ||||| ||||||||||| |||| || || || || |||||||| || || ||||||||| Sbjct: 25616821 atacagccatttgttacaatatgccactatgatatcccacatgaactggacgagcgatat 25616762 Query: 589 ggtggatggttgagtccagaaatccag 615 ||||||||||||||||||||||||||| Sbjct: 25616761 ggtggatggttgagtccagaaatccag 25616735 Score = 83.8 bits (42), Expect = 2e-12 Identities = 87/102 (85%) Strand = Plus / Minus Query: 1348 caagcaagcaatagcagtatgactgctaaggattttaccggcgacacagaaagaattaat 1407 |||||||||||||||| |||||||| |||||||||||| |||||||| |||||||| Sbjct: 25614369 caagcaagcaatagcaacatgactgccaaggattttaccaacgacacaggaagaattacc 25614310 Query: 1408 tacatcagtggctacctcacttatttagcctcggcaataagg 1449 ||||| |||||||||| || |||||||||||||||||| Sbjct: 25614309 tacattcaaggctacctcatttccttagcctcggcaataagg 25614268 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 615 gaaggactttggttactttgcaaaagtatgcttcaagttgtttggcgaccgagtgaaatt 674 ||||||||| ||||||||||| |||||||||||||| ||||||| |||||| | ||||| Sbjct: 25616662 gaaggacttcagttactttgcagaagtatgcttcaagctgtttggtgaccgaataaaatt 25616603 Query: 675 ctgg 678 |||| Sbjct: 25616602 ctgg 25616599 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Minus Query: 375 ggaagatattgagttgatgcattccttgggagtgaactcatatcgattctccatagcatg 434 ||||||||||||||||||||| |||||||| || ||||| || | ||||||||| |||| Sbjct: 25617141 ggaagatattgagttgatgcactccttgggtgtcaactcgtacaggttctccatatcatg 25617082 Query: 435 gacacgaattctaccaag 452 | || | ||||||||||| Sbjct: 25617081 ggcaaggattctaccaag 25617064 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 251 ttgaaggcggatatttggagggtaagaaaggcctaagtaattgggatgtct 301 ||||||||||||||||||||||||| ||||| || || || |||||||||| Sbjct: 25617593 ttgaaggcggatatttggagggtaacaaaggtctcagcaactgggatgtct 25617543
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 111 bits (56), Expect = 9e-21 Identities = 146/176 (82%) Strand = Plus / Minus Query: 1446 aaggaaaggagctgacgtacgtggttactttgtgtggtctctcctcgacgactttgagtg 1505 ||||||||||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 100350 aaggaaaggagctgatgtacgtggctactttgtatggtctctccttgatgacttcgagtg 100291 Query: 1506 gacttcgggatacaaggacagattcgggctctaccatgtcgacttcaagacgcagaagag 1565 || || ||||||| | || |||||||||||||||||| ||| |||||| | |||||| Sbjct: 100290 gaattttggatacacgttaaggttcgggctctaccatgtccactacaagacactgaagag 100231 Query: 1566 gatgccaaaactatcagctgaatggttcaggcagttcctcaaaggttcacttctga 1621 || ||||||| | || | || |||| |||| ||||||||| |||||||| |||| Sbjct: 100230 gacgccaaaattgtcggtagattggtacaggaagttcctcacgggttcactgctga 100175 Score = 111 bits (56), Expect = 9e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 737 ctcctggtcattgttcgaagccgtttgggaattgtgcctttggaaattcttcaatcgagc 796 ||||||||| |||||| | || |||||||| |||||||| || ||||||||||| |||| Sbjct: 102738 ctcctggtcgttgttctgaaccatttgggaagtgtgccttagggaattcttcaatagagc 102679 Query: 797 catacatagtaggtcacaatatgatactttcacatgcaaacgcagtgagcatttacagaa 856 ||||| ||| |||||||||||| ||||| || |||||||| ||||| ||| ||||||||| Sbjct: 102678 catacgtagcaggtcacaatatcatactgtcgcatgcaaatgcagtcagcgtttacagaa 102619 Query: 857 ataactatcagg 868 | || ||||||| Sbjct: 102618 acaaatatcagg 102607 Score = 101 bits (51), Expect = 9e-18 Identities = 150/183 (81%) Strand = Plus / Minus Query: 991 gaccctataattcttggtgattatcctgcagagatgcgcaaaatcttgggcccaacccta 1050 ||||||||| |||||||||||||||| |||||||||| || ||||||| | || |||| Sbjct: 102007 gaccctatacttcttggtgattatcccacagagatgcgtgaagtcttgggtcaaagccta 101948 Query: 1051 cctgagttcacatcaaagcagaagaagaaactacatgcaacaaaactggattttattgga 1110 || ||||||||||||| || ||||| | ||| || |||||| |||||||||| ||| Sbjct: 101947 cccaagttcacatcaaaacaaaagaacagactgcagagcacaaaattggattttatcgga 101888 Query: 1111 ctaaatcattattcgacatggtatttgaaagactgcatcttttcatcatgtgaaatggat 1170 ||||| ||||| ||||||| ||| |||| || |||||||| ||| | |||||||| ||| Sbjct: 101887 ctaaaccattacacgacatgttatgtgaaggattgcatcttctcaccgtgtgaaattgat 101828 Query: 1171 cct 1173 ||| Sbjct: 101827 cct 101825 Score = 85.7 bits (43), Expect = 5e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 1231 aaacagacaggagcaccattcttttatgatgttccacatgggatggaaaaggtggtcatg 1290 |||||||||||||| ||||||||| |||| ||||||| ||||||||| | | |||| Sbjct: 101673 aaacagacaggagcgccattctttcatgacgttccacgagggatggaagaagcagtcaca 101614 Query: 1291 tattacaaacaaagatacaacaacacggcaacatatataacagaaaatggt 1341 || || |||||||||||||||||||| |||||||||| || ||||||||| Sbjct: 101613 tactataaacaaagatacaacaacacaccaacatatatcactgaaaatggt 101563 Score = 85.7 bits (43), Expect = 5e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 529 atacaaccatttgttacgatatttcattacgacattccacatgagcttgaagagcgatat 588 ||||| ||||||||||| |||| || || || || |||||||| || || ||||||||| Sbjct: 103019 atacagccatttgttacaatatgccactatgatatcccacatgaactggacgagcgatat 102960 Query: 589 ggtggatggttgagtccagaaatccag 615 ||||||||||||||||||||||||||| Sbjct: 102959 ggtggatggttgagtccagaaatccag 102933 Score = 83.8 bits (42), Expect = 2e-12 Identities = 87/102 (85%) Strand = Plus / Minus Query: 1348 caagcaagcaatagcagtatgactgctaaggattttaccggcgacacagaaagaattaat 1407 |||||||||||||||| |||||||| |||||||||||| |||||||| |||||||| Sbjct: 100567 caagcaagcaatagcaacatgactgccaaggattttaccaacgacacaggaagaattacc 100508 Query: 1408 tacatcagtggctacctcacttatttagcctcggcaataagg 1449 ||||| |||||||||| || |||||||||||||||||| Sbjct: 100507 tacattcaaggctacctcatttccttagcctcggcaataagg 100466 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 615 gaaggactttggttactttgcaaaagtatgcttcaagttgtttggcgaccgagtgaaatt 674 ||||||||| ||||||||||| |||||||||||||| ||||||| |||||| | ||||| Sbjct: 102860 gaaggacttcagttactttgcagaagtatgcttcaagctgtttggtgaccgaataaaatt 102801 Query: 675 ctgg 678 |||| Sbjct: 102800 ctgg 102797 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Minus Query: 375 ggaagatattgagttgatgcattccttgggagtgaactcatatcgattctccatagcatg 434 ||||||||||||||||||||| |||||||| || ||||| || | ||||||||| |||| Sbjct: 103339 ggaagatattgagttgatgcactccttgggtgtcaactcgtacaggttctccatatcatg 103280 Query: 435 gacacgaattctaccaag 452 | || | ||||||||||| Sbjct: 103279 ggcaaggattctaccaag 103262 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 251 ttgaaggcggatatttggagggtaagaaaggcctaagtaattgggatgtct 301 ||||||||||||||||||||||||| ||||| || || || |||||||||| Sbjct: 103791 ttgaaggcggatatttggagggtaacaaaggtctcagcaactgggatgtct 103741
>gb|DQ289592.1| Oncidium Gower Ramsey beta-mannosidase 4 mRNA, complete cds Length = 1578 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 247 cagattgaaggcggatatttggagggtaagaaaggcctaagtaattgggatgtctacacc 306 ||||||||||| ||||||||||| ||||| |||||| |||| ||||||||||||| | || Sbjct: 143 cagattgaaggtggatatttggatggtaacaaaggcttaagcaattgggatgtcttctcc 202 Query: 307 caca 310 |||| Sbjct: 203 caca 206
>ref|NM_123047.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds (AT5G36890) mRNA, complete cds Length = 1473 Score = 61.9 bits (31), Expect = 8e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccatcgttacatggaagatattga 386 |||||||||||||||||| |||||| |||||||||||| | |||| ||||||| |||| Sbjct: 184 gatggaagtaacggcgatgttgctgtggatcattaccatagatacaaggaagatgttga 242
>ref|NM_001036898.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds (AT5G36890) mRNA, complete cds Length = 1780 Score = 61.9 bits (31), Expect = 8e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccatcgttacatggaagatattga 386 |||||||||||||||||| |||||| |||||||||||| | |||| ||||||| |||| Sbjct: 323 gatggaagtaacggcgatgttgctgtggatcattaccatagatacaaggaagatgttga 381
>gb|BT010611.1| Arabidopsis thaliana At5g36890 gene, complete cds Length = 1473 Score = 61.9 bits (31), Expect = 8e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccatcgttacatggaagatattga 386 |||||||||||||||||| |||||| |||||||||||| | |||| ||||||| |||| Sbjct: 184 gatggaagtaacggcgatgttgctgtggatcattaccatagatacaaggaagatgttga 242
>dbj|AK175760.1| Arabidopsis thaliana mRNA for beta-glucosidase -like protein, complete cds, clone: RAFL22-32-D12 Length = 1760 Score = 61.9 bits (31), Expect = 8e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccatcgttacatggaagatattga 386 |||||||||||||||||| |||||| |||||||||||| | |||| ||||||| |||| Sbjct: 324 gatggaagtaacggcgatgttgctgtggatcattaccatagatacaaggaagatgttga 382
>dbj|AB016877.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18 Length = 74842 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccat 366 |||||||||||||||||| |||||| |||||||||||| Sbjct: 5288 gatggaagtaacggcgatgttgctgtggatcattaccat 5250
>gb|CP000425.1| Lactococcus lactis subsp. cremoris SK11, complete genome Length = 2438589 Score = 50.1 bits (25), Expect = 0.030 Identities = 34/37 (91%) Strand = Plus / Plus Query: 337 aacggcgatattgctgctgatcattaccatcgttaca 373 ||||| ||| |||||| |||||||||||||||||||| Sbjct: 168803 aacggggatgttgctgttgatcattaccatcgttaca 168839
>gb|AY106943.1| Zea mays PCO109123 mRNA sequence Length = 807 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1099 gattttattggactaaatcattat 1122 |||||||||||||||||||||||| Sbjct: 474 gattttattggactaaatcattat 497
>gb|CP000413.1| Lactobacillus gasseri ATCC 33323, complete genome Length = 1894360 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1541 atgtcgacttcaagacgcagaag 1563 ||||||||||||||||||||||| Sbjct: 528599 atgtcgacttcaagacgcagaag 528621
>gb|BT013015.1| Lycopersicon esculentum clone 114253R, mRNA sequence Length = 1714 Score = 46.1 bits (23), Expect = 0.46 Identities = 32/35 (91%) Strand = Plus / Plus Query: 784 tcttcaatcgagccatacatagtaggtcacaatat 818 ||||||| ||||||||||||||||| ||| ||||| Sbjct: 712 tcttcaaccgagccatacatagtagctcataatat 746
>emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 on chromosome 6q22 Contains a high mobility group protein pseudogene, complete sequence Length = 148198 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 gcccctgaactttcagagcagag 78 ||||||||||||||||||||||| Sbjct: 19348 gcccctgaactttcagagcagag 19370
>emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 in linkage group 1, complete sequence Length = 68463 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1318 gcaacatatataacagaaaatg 1339 |||||||||||||||||||||| Sbjct: 48198 gcaacatatataacagaaaatg 48219
>ref|XM_967249.1| PREDICTED: Tribolium castaneum similar to CG9701-PA (LOC661061), mRNA Length = 1464 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1326 tataacagaaaatggttatgct 1347 |||||||||||||||||||||| Sbjct: 1176 tataacagaaaatggttatgct 1197
>ref|XM_581307.2| PREDICTED: Bos taurus similar to Butyrophilin-like protein 2 precursor (BTL-II) (LOC505077), mRNA Length = 1513 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 tctaccaagaggccgatttgga 465 |||||||||||||||||||||| Sbjct: 992 tctaccaagaggccgatttgga 1013
>gb|AC140218.2| Mus musculus BAC clone RP23-474A22 from chromosome 5, complete sequence Length = 184636 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1347 tcaagcaagcaatagcagtatg 1368 |||||||||||||||||||||| Sbjct: 97002 tcaagcaagcaatagcagtatg 96981
>gb|AC102693.9| Mus musculus chromosome 6, clone RP24-127M20, complete sequence Length = 191955 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1758 agttgcaagacatctttatgtg 1779 |||||||||||||||||||||| Sbjct: 9654 agttgcaagacatctttatgtg 9675
>gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome 18, complete sequence Length = 197626 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1328 taacagaaaatggttatgctca 1349 |||||||||||||||||||||| Sbjct: 171275 taacagaaaatggttatgctca 171296
>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete sequence Length = 209064 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1758 agttgcaagacatctttatgtg 1779 |||||||||||||||||||||| Sbjct: 117433 agttgcaagacatctttatgtg 117454
>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence Length = 203330 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 aaggaaggcacaattgaggatg 331 |||||||||||||||||||||| Sbjct: 46281 aaggaaggcacaattgaggatg 46302
>gb|DQ164104.1| HIV-1 isolate 03ZASK010B2 from South Africa, complete genome Length = 9048 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1112 taaatcattattcgacatggta 1133 |||||||||||||||||||||| Sbjct: 448 taaatcattattcgacatggta 469
>gb|AY137343.1| Mus musculus osteoclast inhibitory lectin related protein 2 (Ocilrp2) gene, complete cds, alternatively spliced Length = 9546 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1758 agttgcaagacatctttatgtg 1779 |||||||||||||||||||||| Sbjct: 4267 agttgcaagacatctttatgtg 4246
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1318 gcaacatatataacagaaaatg 1339 |||||||||||||||||||||| Sbjct: 128345 gcaacatatataacagaaaatg 128366
>gb|AC155159.2| Mus musculus BAC clone RP24-482D1 from 18, complete sequence Length = 190752 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1328 taacagaaaatggttatgctca 1349 |||||||||||||||||||||| Sbjct: 176154 taacagaaaatggttatgctca 176133
>gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, complete sequence Length = 210762 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 aaggaaggcacaattgaggatg 331 |||||||||||||||||||||| Sbjct: 168040 aaggaaggcacaattgaggatg 168061
>dbj|AK243365.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100061O18, full insert sequence Length = 1731 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 tgatcattaccatcgttacatggaagatattga 386 ||||||||||||||| |||| |||||| ||||| Sbjct: 294 tgatcattaccatcgatacaaggaagacattga 326
>ref|NM_001051624.1| Oryza sativa (japonica cultivar-group) Os01g0897600 (Os01g0897600) mRNA, complete cds Length = 1452 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 tgatcattaccatcgttacatggaagatattga 386 ||||||||||||||| |||| |||||| ||||| Sbjct: 192 tgatcattaccatcgatacaaggaagacattga 224
>ref|XM_001215515.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_06337) mRNA, complete cds Length = 2868 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 gagttgatgcattccttggga 405 ||||||||||||||||||||| Sbjct: 2363 gagttgatgcattccttggga 2343
>gb|AC189676.2| Trichinella spiralis BAC clone TS195-2H12 from chromosome unknown, complete sequence Length = 94786 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 agcatttacagaaataactat 864 ||||||||||||||||||||| Sbjct: 79829 agcatttacagaaataactat 79809
>ref|NM_106244.2| Arabidopsis thaliana ATA27; hydrolase, hydrolyzing O-glycosyl compounds (ATA27) mRNA, complete cds Length = 1878 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 361 taccatcgttacatggaagatattgagttgatg 393 ||||||||||||| ||||||||| |||||||| Sbjct: 310 taccatcgttacaaggaagatatcaagttgatg 342
>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete sequence Length = 271546 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1663 acttcctgagctactgatggttctt 1687 ||||||||||||| ||||||||||| Sbjct: 189328 acttcctgagctaatgatggttctt 189304
>gb|AF202180.3| Plasmodium falciparum erythrocyte membrane-associated giant protein antigen 332 gene, complete cds Length = 16377 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1663 acttcctgagctactgatggttctt 1687 ||||||||||||| ||||||||||| Sbjct: 3932 acttcctgagctaatgatggttctt 3908
>gb|AC108513.3| Homo sapiens BAC clone RP13-936H15 from 7, complete sequence Length = 166667 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1827 atatttatgtttgtgaataga 1847 ||||||||||||||||||||| Sbjct: 162740 atatttatgtttgtgaataga 162720
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA sequence Length = 1023 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1479 gtggtctctcctcgacgactttgagtgga 1507 |||||||||||||||| |||| ||||||| Sbjct: 742 gtggtctctcctcgacaacttcgagtgga 770
>gb|AY074517.1| Arabidopsis thaliana putative beta-glucosidase (At1g75940) mRNA, partial cds Length = 1765 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 361 taccatcgttacatggaagatattgagttgatg 393 ||||||||||||| ||||||||| |||||||| Sbjct: 180 taccatcgttacaaggaagatatcaagttgatg 212
>ref|XM_746241.1| Aspergillus fumigatus Af293 beta-glucosidase 1 (Afu6g14600) partial mRNA Length = 1512 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 415 tatcgattctccatagcatggacacgaat 443 |||||||||||||| || ||||||||||| Sbjct: 394 tatcgattctccatcgcctggacacgaat 422
>emb|AL132948.2| Caenorhabditis elegans YAC Y39B6A, complete sequence Length = 246237 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1389 cgacacagaaagaattaatta 1409 ||||||||||||||||||||| Sbjct: 202789 cgacacagaaagaattaatta 202769
>gb|AC164656.5| Pan troglodytes BAC clone CH251-483E17 from chromosome unknown, complete sequence Length = 230238 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 accttgtttccctgtgcctga 1739 ||||||||||||||||||||| Sbjct: 189406 accttgtttccctgtgcctga 189426
>emb|AL157948.10| Human DNA sequence from clone RP4-686N16 on chromosome 1p31.3-33 Contains the 3' end of gene KIAA1365, complete sequence Length = 94870 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 gagtccagaaatccagaagga 620 ||||||||||||||||||||| Sbjct: 51168 gagtccagaaatccagaagga 51188
>emb|AL121722.9|HSJ788L20 Human DNA sequence from clone RP4-788L20 on chromosome 20 Contains the FOXA2 gene for forkhead box A2, a novel gene, the 5' end of the C20orf56 gene for chromosome 20 open reading frame 56, the 5' end of a novel gene and five CpG islands, complete sequence Length = 120869 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1319 caacatatataacagaaaatg 1339 ||||||||||||||||||||| Sbjct: 43814 caacatatataacagaaaatg 43834
>emb|AL109842.7|HSDJ726A1 Human DNA sequence from clone RP4-726A1 on chromosome 6q22.2-23.1 Contains part of the TCBA1 gene for T-cell lymphoma breakpoint associated target 1, complete sequence Length = 120998 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 gagtccagaaatccagaagga 620 ||||||||||||||||||||| Sbjct: 111450 gagtccagaaatccagaagga 111470
>gb|AC158243.2| Pan troglodytes BAC clone CH251-334P1 from chromosome unknown, complete sequence Length = 167489 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 accttgtttccctgtgcctga 1739 ||||||||||||||||||||| Sbjct: 76618 accttgtttccctgtgcctga 76638
>emb|Z92824.1|CEB0413 Caenorhabditis elegans cosmid B0413, complete sequence Length = 39726 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1389 cgacacagaaagaattaatta 1409 ||||||||||||||||||||| Sbjct: 1228 cgacacagaaagaattaatta 1248
>gb|BT002735.1| Arabidopsis thaliana clone C105021 putative beta-glucosidase (At1g75940) mRNA, complete cds Length = 1639 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 361 taccatcgttacatggaagatattgagttgatg 393 ||||||||||||| ||||||||| |||||||| Sbjct: 280 taccatcgttacaaggaagatatcaagttgatg 312
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1295 acaaacaaagatacaacaaca 1315 ||||||||||||||||||||| Sbjct: 158591 acaaacaaagatacaacaaca 158611
>gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, complete sequence Length = 208009 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1295 acaaacaaagatacaacaaca 1315 ||||||||||||||||||||| Sbjct: 53483 acaaacaaagatacaacaaca 53503
>gb|AC152499.17| Medicago truncatula clone mth2-56f20, complete sequence Length = 125561 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 328 gatggaagtaacggcgatattgctgctgatcattaccatcg 368 |||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 77970 gatggaagtaacggggatatcgctgttgaccattatcatcg 77930
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 7.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 413 catatcgattctccatagcatggacacgaattctacc 449 ||||||| ||||| || ||||||||||||||| |||| Sbjct: 1213647 catatcgtttctcgattgcatggacacgaattttacc 1213683
>gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome 3, complete sequence Length = 215382 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aggaaggcacaattgaggatg 331 ||||||||||||||||||||| Sbjct: 82495 aggaaggcacaattgaggatg 82515
>gb|AF037590.1|AF037590 Arabidopsis thaliana ATA27 mRNA, complete cds Length = 1882 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 361 taccatcgttacatggaagatattgagttgatg 393 ||||||||||||| ||||||||| |||||||| Sbjct: 310 taccatcgttacaaggaagatatcaagttgatg 342
>emb|AL672254.9| Mouse DNA sequence from clone RP23-409H23 on chromosome X, complete sequence Length = 173251 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1366 atgactgctaaggattttacc 1386 ||||||||||||||||||||| Sbjct: 39909 atgactgctaaggattttacc 39929 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 361,420,545 Number of extensions: 18796004 Number of successful extensions: 354779 Number of sequences better than 10.0: 54 Number of HSP's gapped: 354765 Number of HSP's successfully gapped: 74 Length of query: 1890 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1867 Effective length of database: 18,503,978,556 Effective search space: 34546927964052 Effective search space used: 34546927964052 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)