ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132l07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104514:Os03g0282900 | 261 | 4e-70 | 2 | AK102161:Os03g0282900 | 261 | 4e-70 | 3 | AK061166:Os03g0282900 | 261 | 4e-70 | 4 | Os08g0207700:Os08g0207700 | 31 | 1.1 | 5 | Y07956:Os01g0633500 | 30 | 2.4 | 6 | AB003496:Os01g0633500 | 30 | 2.4 | 7 | AK121586:Os11g0266800 | 29 | 4.0 | 8 | AK121684:Os01g0266000 | 29 | 5.3 | 9 | AK068277:Os09g0563300 | 28 | 9.0 | 10 | AK060773:Os09g0563300 | 28 | 9.0 |
|---|
>AK104514:Os03g0282900 | Length = 238 Score = 261 bits (668), Expect = 4e-70 Identities = 133/205 (64%), Positives = 162/205 (79%), Gaps = 10/205 (4%) Frame = +1 Query: 187 RLFSTDASG-------AVAGSQDD---SSSGEGHTYGRFYTNISGVGRLGKNMLKTDIIH 336 RLFST+ASG A GSQD+ S EG YGRFY+ I G RL K+MLKTDIIH Sbjct: 34 RLFSTEASGETPAAGAAAQGSQDEPFFKPSDEGVAYGRFYSVIPGGSRLPKSMLKTDIIH 93 Query: 337 YLDQCELSLDDVKIDYNKGFYPMGALLKFPSVESFEAALRQTIQGRMYRLERVSPDVWEH 516 +LD+ ELSLDDVKIDYN+G+YP+GALL+F SV F A+RQT +GR YRLE +S + ++ Sbjct: 94 HLDKSELSLDDVKIDYNRGYYPVGALLRFSSVPLFNTAVRQTREGRQYRLEMISREEFDL 153 Query: 517 KISLNGKAVLLQGVPRSAQADDIERFLCGTNYEPPPFENFVRAGVPEPVRMVLVKFGSRT 696 K S +GKA+LLQGVPR+A +DIERFLCGTN EPPPFE+F+R GVP+P+R+VLVKF SRT Sbjct: 154 KQSYDGKAILLQGVPRNAVPEDIERFLCGTNVEPPPFESFLRPGVPDPIRVVLVKFRSRT 213 Query: 697 DATNAFIAKNKGFCLNSPVTMRVIQ 771 DA NAFI KN+GFCLN+PV+MRV+Q Sbjct: 214 DAANAFITKNRGFCLNNPVSMRVLQ 238
>AK102161:Os03g0282900 | Length = 238 Score = 261 bits (668), Expect = 4e-70 Identities = 133/205 (64%), Positives = 162/205 (79%), Gaps = 10/205 (4%) Frame = +1 Query: 187 RLFSTDASG-------AVAGSQDD---SSSGEGHTYGRFYTNISGVGRLGKNMLKTDIIH 336 RLFST+ASG A GSQD+ S EG YGRFY+ I G RL K+MLKTDIIH Sbjct: 34 RLFSTEASGETPAAGAAAQGSQDEPFFKPSDEGVAYGRFYSVIPGGSRLPKSMLKTDIIH 93 Query: 337 YLDQCELSLDDVKIDYNKGFYPMGALLKFPSVESFEAALRQTIQGRMYRLERVSPDVWEH 516 +LD+ ELSLDDVKIDYN+G+YP+GALL+F SV F A+RQT +GR YRLE +S + ++ Sbjct: 94 HLDKSELSLDDVKIDYNRGYYPVGALLRFSSVPLFNTAVRQTREGRQYRLEMISREEFDL 153 Query: 517 KISLNGKAVLLQGVPRSAQADDIERFLCGTNYEPPPFENFVRAGVPEPVRMVLVKFGSRT 696 K S +GKA+LLQGVPR+A +DIERFLCGTN EPPPFE+F+R GVP+P+R+VLVKF SRT Sbjct: 154 KQSYDGKAILLQGVPRNAVPEDIERFLCGTNVEPPPFESFLRPGVPDPIRVVLVKFRSRT 213 Query: 697 DATNAFIAKNKGFCLNSPVTMRVIQ 771 DA NAFI KN+GFCLN+PV+MRV+Q Sbjct: 214 DAANAFITKNRGFCLNNPVSMRVLQ 238
>AK061166:Os03g0282900 | Length = 238 Score = 261 bits (668), Expect = 4e-70 Identities = 133/205 (64%), Positives = 162/205 (79%), Gaps = 10/205 (4%) Frame = +1 Query: 187 RLFSTDASG-------AVAGSQDD---SSSGEGHTYGRFYTNISGVGRLGKNMLKTDIIH 336 RLFST+ASG A GSQD+ S EG YGRFY+ I G RL K+MLKTDIIH Sbjct: 34 RLFSTEASGETPAAGAAAQGSQDEPFFKPSDEGVAYGRFYSVIPGGSRLPKSMLKTDIIH 93 Query: 337 YLDQCELSLDDVKIDYNKGFYPMGALLKFPSVESFEAALRQTIQGRMYRLERVSPDVWEH 516 +LD+ ELSLDDVKIDYN+G+YP+GALL+F SV F A+RQT +GR YRLE +S + ++ Sbjct: 94 HLDKSELSLDDVKIDYNRGYYPVGALLRFSSVPLFNTAVRQTREGRQYRLEMISREEFDL 153 Query: 517 KISLNGKAVLLQGVPRSAQADDIERFLCGTNYEPPPFENFVRAGVPEPVRMVLVKFGSRT 696 K S +GKA+LLQGVPR+A +DIERFLCGTN EPPPFE+F+R GVP+P+R+VLVKF SRT Sbjct: 154 KQSYDGKAILLQGVPRNAVPEDIERFLCGTNVEPPPFESFLRPGVPDPIRVVLVKFRSRT 213 Query: 697 DATNAFIAKNKGFCLNSPVTMRVIQ 771 DA NAFI KN+GFCLN+PV+MRV+Q Sbjct: 214 DAANAFITKNRGFCLNNPVSMRVLQ 238
>Os08g0207700:Os08g0207700 | Length = 520 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = +1 Query: 367 DVKIDYNKGFYPMGALLKFPSVESFEAALRQTIQGRMYRLERVSPDVWEHKISLNGK 537 ++ I Y+K M K+PS++ F A+RQ + + L +V D ++++++ K Sbjct: 140 ELVISYDKNNPCMDRYTKYPSMKEFRLAVRQFAIKKEFELGKVKTDPERYRVTVHNK 196
>Y07956:Os01g0633500 | Length = 323 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 90 DVEARGCRPPRRPHRFRGALLLDPSGISP 176 D EA RPPRRP R R L +P G P Sbjct: 181 DPEAGAVRPPRRPLRRRDLPLREPRGARP 209
>AB003496:Os01g0633500 | Length = 323 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 90 DVEARGCRPPRRPHRFRGALLLDPSGISP 176 D EA RPPRRP R R L +P G P Sbjct: 181 DPEAGAVRPPRRPLRRRDLPLREPRGARP 209
>AK121586:Os11g0266800 | Length = 900 Score = 29.3 bits (64), Expect = 4.0 Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Frame = -3 Query: 792 MIISDKLLNNPHGN--RTVQTETLVFSNEGIGCISPRAELYQHHSYRLRNPSSDKVFKWR 619 ++IS L NN + R ++ +VF ++ + +A+ H+Y L + +VF Sbjct: 319 LLISLYLRNNAYNEALRLIERAHIVFGSQHNLPVQLQAKAVICHAY-LGDMKHAEVFLQN 377 Query: 618 RFIVSAAQETFYVISLSASRDSLQQYSFSIQRYLVFPHIRTH 493 + + T + ++++ ++L QY ++I+ YL+ + H Sbjct: 378 VHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVH 419
>AK121684:Os01g0266000 | Length = 966 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 25/103 (24%) Frame = -3 Query: 711 GIGCISPRAELYQHHSYRLRNPSSDKVFK-WRRFIVSAAQETF------------YVISL 571 GIGC LY+ SY LR+ +D ++K +++F + A + Y + Sbjct: 818 GIGCSEEMNSLYRFWSYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYSYGLEK 877 Query: 570 SASRDSLQQYS------------FSIQRYLVFPHIRTHPLKPV 478 + R+ + + + +++Y F H R P+ Sbjct: 878 NFQRNVYEDFEQLTLEFHHKGDLYGLEKYWAFHHFRNQDSSPI 920
>AK068277:Os09g0563300 | Length = 408 Score = 28.1 bits (61), Expect = 9.0 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 12/65 (18%) Frame = +1 Query: 511 EHKISLN--GKAVLLQG--VPRSAQADD---IERFLC-----GTNYEPPPFENFVRAGVP 654 E KI +N GKA+L+ + R+A AD +E+ L G N FE+ V AGV Sbjct: 296 EEKIGVNIVGKALLVPAMTIARNAGADGPAVVEKLLASEWRVGYNAMTDKFEDLVDAGVV 355 Query: 655 EPVRM 669 +P R+ Sbjct: 356 DPCRV 360
>AK060773:Os09g0563300 | Length = 286 Score = 28.1 bits (61), Expect = 9.0 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 12/65 (18%) Frame = +1 Query: 511 EHKISLN--GKAVLLQG--VPRSAQADD---IERFLC-----GTNYEPPPFENFVRAGVP 654 E KI +N GKA+L+ + R+A AD +E+ L G N FE+ V AGV Sbjct: 174 EEKIGVNIVGKALLVPAMTIARNAGADGPAVVEKLLASEWRVGYNAMTDKFEDLVDAGVV 233 Query: 655 EPVRM 669 +P R+ Sbjct: 234 DPCRV 238 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,611,761 Number of extensions: 614858 Number of successful extensions: 1480 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1480 Number of HSP's successfully gapped: 10 Length of query: 305 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 205 Effective length of database: 11,395,755 Effective search space: 2336129775 Effective search space used: 2336129775 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
