>Q9JR30:DBHC_NEIMA DNA-binding protein HU-beta 2 - Neisseria meningitidis serogroup A|
          Length = 91
 Score = 33.9 bits (76), Expect = 2.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 956 LS*ATSETNDASEVALITTGTLHARDTRQRHKRNPATAK 840
           +S  T E  D ++V L+  GT HA  + +R  RNP T +
Sbjct: 29  VSVVTQELKDGNDVTLVGFGTFHAAQSAERQGRNPKTGE 67

>Q06486:KC1D_RAT Casein kinase I isoform delta - Rattus norvegicus (Rat)|
          Length = 415

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -1

Query: 884 RDTRQRHKRNPATAKRPYDVRRVSTYISRATSRMSGTHMQALPDPSMVQSQLIGRTRRQ* 705
           R+ R RH RNPAT   P          S A+ R+ GT   A P P    S     + R  
Sbjct: 311 REERLRHSRNPATRGLP----------STASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 704 SAVER 690
           S +ER
Sbjct: 361 SGMER 365

>Q9DC28:KC1D_MOUSE Casein kinase I isoform delta - Mus musculus (Mouse)|
          Length = 415

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -1

Query: 884 RDTRQRHKRNPATAKRPYDVRRVSTYISRATSRMSGTHMQALPDPSMVQSQLIGRTRRQ* 705
           R+ R RH RNPAT   P          S A+ R+ GT   A P P    S     + R  
Sbjct: 311 REERLRHSRNPATRGLP----------STASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 704 SAVER 690
           S +ER
Sbjct: 361 SGMER 365

>P48730:KC1D_HUMAN Casein kinase I isoform delta - Homo sapiens (Human)|
          Length = 415

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -1

Query: 884 RDTRQRHKRNPATAKRPYDVRRVSTYISRATSRMSGTHMQALPDPSMVQSQLIGRTRRQ* 705
           R+ R RH RNPAT   P          S A+ R+ GT   A P P    S     + R  
Sbjct: 311 REERLRHSRNPATRGLP----------STASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 704 SAVER 690
           S +ER
Sbjct: 361 SGMER 365

>P35508:KC1D_BOVIN Casein kinase I isoform delta - Bos taurus (Bovine)|
          Length = 415

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -1

Query: 884 RDTRQRHKRNPATAKRPYDVRRVSTYISRATSRMSGTHMQALPDPSMVQSQLIGRTRRQ* 705
           R+ R RH RNPAT   P          S A+ R+ GT   A P P    S     + R  
Sbjct: 311 REERLRHSRNPATRGLP----------STASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 704 SAVER 690
           S +ER
Sbjct: 361 SGMER 365

>Q95KD5:DJC18_MACFA DnaJ homolog subfamily C member 18 - Macaca fascicularis (Crab eating|
            macaque) (Cynomolgus monkey)
          Length = 358

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 1103 PLEIDNRLGCCLCVSMQVEPEDDNQCWTSSRTCYLVDPASSHML--VSKIKPCMCKYE 1270
            P E  +  GCC CV  Q E + +N+ WT +R        S   L  V +IK C   YE
Sbjct: 29   PPESHDPCGCCNCVKAQKEKKSENE-WTQTRQGEGSSMYSEEQLLGVQRIKKCRNYYE 85

>Q60AY8:IHFA_METCA Integration host factor subunit alpha - Methylococcus capsulatus|
          Length = 110

 Score = 32.0 bits (71), Expect = 9.8
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -1

Query: 917 VALITTGTLHARDTRQRHKRNPATAKR-PYDVRRVSTYISRATSRMSGTHMQALPDPSM 744
           V L   G    RD RQR  RNP T +  P   RRV T+  +A  ++  T ++AL +P +
Sbjct: 44  VKLSGFGNFDLRDKRQRPGRNPKTGEEIPITARRVVTF--KAGQKLKAT-VEALQEPEL 99


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 379,083,197
Number of extensions: 8886935
Number of successful extensions: 21653
Number of sequences better than 10.0: 7
Number of HSP's gapped: 21639
Number of HSP's successfully gapped: 7
Length of query: 664
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 544
Effective length of database: 67,771,039
Effective search space: 36867445216
Effective search space used: 36867445216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)