| Clone Name | FLbaf129m10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z18804.1|TATFIIDMR T.aestivum TFIID mRNA encoding DNA binding protein Length = 1154 Score = 1070 bits (540), Expect = 0.0 Identities = 648/681 (95%), Gaps = 6/681 (0%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 122 ctggaggggagcgagccggtggatctgaccaagcacccctccggcatcatccccacgctc 181 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 182 cagaatattgtgtcgacggtcaacctggactgtaagttggacctgaaagcaatagctctc 241 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 242 caggcacgcaatgcagagtataaccccaagcgttttgctgcagttatcatgcggataaga 301 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 302 gaaccaaaaactaccgcattgatatttgcttcaggaaaaatggtttgcactggagcaaaa 361 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 362 agtgaacaacaatctaaactcgcagctagaaagtatgctcgtataattcagaagcttgga 421 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 tttcctgcaaaattcaaggacttcaagatccagaatattgttgcctcttgtgatgtcaaa 481 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 482 ttccctatcaggcttgagggcctcgcatattcccatggcgctttctcaagttatgagcca 541 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 542 gagctatttcccggtctgatttaccggatgaggcagccgaagattgtcctcctaattttt 601 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 602 gtttctggcaagattgttctgactggagcaaaggtgagagaagagacatactccgccttc 661 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatgatggtgactttgg 699 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 662 gagaacatatatcctgtcctgacagagttcagaaaagtccagcaatgatggtgactttgg 721 Query: 700 aagtaa-gcagaattggagatattgttgcttgctgcctgctccaacctcgcaaagagtct 758 |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||| Sbjct: 722 aagtaaagcagaattggagacattgttgcttgctgccagctccaacctcgcaaag--tct 779 Query: 759 ataaggcatagcccgtcttcc 779 | ||||||||||||||||| Sbjct: 780 a---ggcatagcccgtcttcc 797 Score = 119 bits (60), Expect = 2e-23 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 815 ctgtccatcagattaggagcacctggtgtcgtaaccgactagggt-cttctttttgtgat 873 |||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||||||| Sbjct: 824 ctgtccatcagatttggagtacctgttgtcgtaatcgactagggttcttctttttgtgat 883 Query: 874 ggatcatggttgatcatcgcaggt 897 |||||||||||||||||||||||| Sbjct: 884 ggatcatggttgatcatcgcaggt 907 Score = 81.8 bits (41), Expect = 5e-12 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand = Plus / Plus Query: 909 tcgttcctcacttgaagcactct-gtggaagtcgagtaaaacccaagcaaattttgctcc 967 |||| ||||||| ||| |||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 936 tcgtccctcactcgaaacactcttgtggaagttgagtgaaacccaagcaaattttgctcc 995 Query: 968 tggatttctaaagccttttctttctcctgatgatg 1002 |||| ||||| |||||| ||||||||||||||| Sbjct: 996 tgga-ttctagagcctt---tttctcctgatgatg 1026 Score = 65.9 bits (33), Expect = 3e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 1016 gctgatgtatatctactcgtagacgcgtt-gcgccctgttaaaaggagggctt 1067 |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1044 gctgatgtatattcacttgtagacgcgtttgcgccctgttaaaaggagggctt 1096
>gb|L07604.1|WHTTFIIDA Triticum aestivum DNA-binding protein (TFIID) mRNA, complete cds Length = 1154 Score = 1070 bits (540), Expect = 0.0 Identities = 648/681 (95%), Gaps = 6/681 (0%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 122 ctggaggggagcgagccggtggatctgaccaagcacccctccggcatcatccccacgctc 181 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 182 cagaatattgtgtcgacggtcaacctggactgtaagttggacctgaaagcaatagctctc 241 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 242 caggcacgcaatgcagagtataaccccaagcgttttgctgcagttatcatgcggataaga 301 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 302 gaaccaaaaactaccgcattgatatttgcttcaggaaaaatggtttgcactggagcaaaa 361 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 362 agtgaacaacaatctaaactcgcagctagaaagtatgctcgtataattcagaagcttgga 421 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 tttcctgcaaaattcaaggacttcaagatccagaatattgttgcctcttgtgatgtcaaa 481 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 482 ttccctatcaggcttgagggcctcgcatattcccatggcgctttctcaagttatgagcca 541 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 542 gagctatttcccggtctgatttaccggatgaggcagccgaagattgtcctcctaattttt 601 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 602 gtttctggcaagattgttctgactggagcaaaggtgagagaagagacatactccgccttc 661 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatgatggtgactttgg 699 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 662 gagaacatatatcctgtcctgacagagttcagaaaagtccagcaatgatggtgactttgg 721 Query: 700 aagtaa-gcagaattggagatattgttgcttgctgcctgctccaacctcgcaaagagtct 758 |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||| Sbjct: 722 aagtaaagcagaattggagacattgttgcttgctgccagctccaacctcgcaaag--tct 779 Query: 759 ataaggcatagcccgtcttcc 779 | ||||||||||||||||| Sbjct: 780 a---ggcatagcccgtcttcc 797 Score = 119 bits (60), Expect = 2e-23 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 815 ctgtccatcagattaggagcacctggtgtcgtaaccgactagggt-cttctttttgtgat 873 |||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||||||| Sbjct: 824 ctgtccatcagatttggagtacctgttgtcgtaatcgactagggttcttctttttgtgat 883 Query: 874 ggatcatggttgatcatcgcaggt 897 |||||||||||||||||||||||| Sbjct: 884 ggatcatggttgatcatcgcaggt 907 Score = 81.8 bits (41), Expect = 5e-12 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand = Plus / Plus Query: 909 tcgttcctcacttgaagcactct-gtggaagtcgagtaaaacccaagcaaattttgctcc 967 |||| ||||||| ||| |||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 936 tcgtccctcactcgaaacactcttgtggaagttgagtgaaacccaagcaaattttgctcc 995 Query: 968 tggatttctaaagccttttctttctcctgatgatg 1002 |||| ||||| |||||| ||||||||||||||| Sbjct: 996 tgga-ttctagagcctt---tttctcctgatgatg 1026 Score = 65.9 bits (33), Expect = 3e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 1016 gctgatgtatatctactcgtagacgcgtt-gcgccctgttaaaaggagggctt 1067 |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1044 gctgatgtatattcacttgtagacgcgtttgcgccctgttaaaaggagggctt 1096
>emb|CT830226.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103A15, full insert sequence Length = 1218 Score = 563 bits (284), Expect = e-157 Identities = 509/584 (87%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 250 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 309 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || || ||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 310 caaaacatcgtatcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 369 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || || ||||||||||| ||||| || |||||||||||||||||||||||| | |||||| Sbjct: 370 caagctcgcaatgcagaatataatccaaagcgttttgctgcggttatcatgagaataaga 429 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 |||||||||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 430 gaaccaaaaactacagctctgatatttgcatcgggtaaaatggtctgtactggggcaaag 489 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 490 agtgaacaacaatccaagcttgcagcaagaaagtacgctcgtattatccagaagcttggc 549 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||| ||||||||||| |||||||| ||||| || |||| |||||||||||| ||| Sbjct: 550 tttcctgctaaattcaaggatttcaagattcagaacattgttggctcttgtgatgttaaa 609 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 610 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcca 669 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| || |||||||| || | |||||| Sbjct: 670 gaactctttcctggtctgatatatcggatgaagcaaccaaagattgttcttctgattttt 729 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 730 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 789 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagca 683 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 790 gagaacatataccctgtgctaacggagttcagaaaagtccagca 833
>ref|NM_001057347.1| Oryza sativa (japonica cultivar-group) Os03g0657000 (Os03g0657000) mRNA, complete cds Length = 1175 Score = 563 bits (284), Expect = e-157 Identities = 509/584 (87%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 207 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 266 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || || ||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 267 caaaacatcgtatcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 326 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || || ||||||||||| ||||| || |||||||||||||||||||||||| | |||||| Sbjct: 327 caagctcgcaatgcagaatataatccaaagcgttttgctgcggttatcatgagaataaga 386 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 |||||||||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 387 gaaccaaaaactacagctctgatatttgcatcgggtaaaatggtctgtactggggcaaag 446 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 447 agtgaacaacaatccaagcttgcagcaagaaagtacgctcgtattatccagaagcttggc 506 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||| ||||||||||| |||||||| ||||| || |||| |||||||||||| ||| Sbjct: 507 tttcctgctaaattcaaggatttcaagattcagaacattgttggctcttgtgatgttaaa 566 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 567 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcca 626 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| || |||||||| || | |||||| Sbjct: 627 gaactctttcctggtctgatatatcggatgaagcaaccaaagattgttcttctgattttt 686 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 687 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 746 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagca 683 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 747 gagaacatataccctgtgctaacggagttcagaaaagtccagca 790
>dbj|AK061103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B06, full insert sequence Length = 1175 Score = 563 bits (284), Expect = e-157 Identities = 509/584 (87%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 207 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 266 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || || ||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 267 caaaacatcgtatcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 326 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || || ||||||||||| ||||| || |||||||||||||||||||||||| | |||||| Sbjct: 327 caagctcgcaatgcagaatataatccaaagcgttttgctgcggttatcatgagaataaga 386 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 |||||||||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 387 gaaccaaaaactacagctctgatatttgcatcgggtaaaatggtctgtactggggcaaag 446 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 447 agtgaacaacaatccaagcttgcagcaagaaagtacgctcgtattatccagaagcttggc 506 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||| ||||||||||| |||||||| ||||| || |||| |||||||||||| ||| Sbjct: 507 tttcctgctaaattcaaggatttcaagattcagaacattgttggctcttgtgatgttaaa 566 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 567 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcca 626 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| || |||||||| || | |||||| Sbjct: 627 gaactctttcctggtctgatatatcggatgaagcaaccaaagattgttcttctgattttt 686 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 687 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 746 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagca 683 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 747 gagaacatataccctgtgctaacggagttcagaaaagtccagca 790
>ref|NM_001073660.1| Oryza sativa (japonica cultivar-group) Os12g0580300 (Os12g0580300) mRNA, complete cds Length = 1133 Score = 557 bits (281), Expect = e-155 Identities = 512/589 (86%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 194 ctggaggggagcgagcccgtggacctggtcaagcacccctccggcatcatccccacgctc 253 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || |||||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 254 caaaacatcgtgtcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 313 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || |||||||||||||| ||||| || |||||||||||||| ||||||||| | |||||| Sbjct: 314 caagcacgcaatgcagaatataatccaaagcgttttgctgcagttatcatgagaataaga 373 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||| |||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 374 gaaccgaaaactacagctctgatatttgcatcgggtaaaatggtatgtactggggcaaag 433 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 |||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 434 agcgaacaacaatcaaagcttgcagcaagaaagtatgctcgtattatccaaaagcttggc 493 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 ||| |||| || || |||||||||||||| ||||| || |||| ||||||||||| ||| Sbjct: 494 tttgctgctaagtttaaggacttcaagattcagaacattgttggttcttgtgatgttaaa 553 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 554 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcct 613 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| ||||||||||| || | |||||| Sbjct: 614 gaactctttcctggtctgatatatcggatgaagcaaccgaagattgttcttctgattttt 673 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 674 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 733 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatgat 688 ||||||||||| ||||| || ||||||||||||||||| |||||||||| Sbjct: 734 gagaacatataccctgtgctaacagagttcagaaaagtccagcaatgat 782
>gb|AF464907.1| Oryza sativa TATA-binding protein TBP2 (TBP2) mRNA, complete cds Length = 1071 Score = 557 bits (281), Expect = e-155 Identities = 508/584 (86%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 192 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 251 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || || ||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 252 caaaacatcgtatcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 311 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || || ||||||||||| ||||| || |||||||||||||||||||||||| | |||||| Sbjct: 312 caagctcgcaatgcagaatataatccaaagcgttttgctgcggttatcatgagaataaga 371 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 |||||||||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 372 gaaccaaaaactacagctctgatatttgcatcgggtaaaatggtctgtactggggcaaag 431 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 432 agtgaacaacaatccaagcttgcagcaagaaagtacgctcgtattatccagaagcttggc 491 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||| ||||||||||| |||||||| || || || |||| |||||||||||| ||| Sbjct: 492 tttcctgctaaattcaaggatttcaagattcanaacattgttggctcttgtgatgttaaa 551 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 552 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcca 611 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| || |||||||| || | |||||| Sbjct: 612 gaactctttcctggtctgatatatcggatgaagcaaccaaagattgttcttctgattttt 671 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 672 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 731 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagca 683 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 732 gagaacatataccctgtgctaacggagttcagaaaagtccagca 775
>dbj|AK102871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112A19, full insert sequence Length = 1135 Score = 557 bits (281), Expect = e-155 Identities = 512/589 (86%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 196 ctggaggggagcgagcccgtggacctggtcaagcacccctccggcatcatccccacgctc 255 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || |||||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 256 caaaacatcgtgtcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 315 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || |||||||||||||| ||||| || |||||||||||||| ||||||||| | |||||| Sbjct: 316 caagcacgcaatgcagaatataatccaaagcgttttgctgcagttatcatgagaataaga 375 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||| |||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 376 gaaccgaaaactacagctctgatatttgcatcgggtaaaatggtatgtactggggcaaag 435 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 |||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 436 agcgaacaacaatcaaagcttgcagcaagaaagtatgctcgtattatccaaaagcttggc 495 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 ||| |||| || || |||||||||||||| ||||| || |||| ||||||||||| ||| Sbjct: 496 tttgctgctaagtttaaggacttcaagattcagaacattgttggttcttgtgatgttaaa 555 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 556 tttccaatcaggctggagggacttgcatattctcatggtgctttctcaagttatgagcct 615 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| ||||||||||| || | |||||| Sbjct: 616 gaactctttcctggtctgatatatcggatgaagcaaccgaagattgttcttctgattttt 675 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 676 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 735 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatgat 688 ||||||||||| ||||| || ||||||||||||||||| |||||||||| Sbjct: 736 gagaacatataccctgtgctaacagagttcagaaaagtccagcaatgat 784
>dbj|AK099162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I02, full insert sequence Length = 1166 Score = 555 bits (280), Expect = e-154 Identities = 508/584 (86%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 198 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 257 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || || ||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 258 caaaacatcgtatcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 317 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || || ||||||||||| ||||| || |||||||||||||||||||||||| | |||||| Sbjct: 318 caagctcgcaatgcagaatataatccaaagcgttttgctgcggttatcatgagaataaga 377 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 |||||||||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 378 gaaccaaaaactacagctctgatatttgcatcgggtaaaatggtctgtactggggcaaag 437 Query: 340 agcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggc 399 || ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 438 agtgaacaacaatccaagcttgcagcaagaaagtacgctcgtattatccagaagcttggc 497 Query: 400 tttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaa 459 |||||||| ||||||||||| |||||||| ||||| || |||| |||||||||||| ||| Sbjct: 498 tttcctgctaaattcaaggatttcaagattcagaacattgttggctcttgtgatgttaaa 557 Query: 460 ttccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagcca 519 || || |||||||| ||||| || |||||||||||||||| ||||||||||||||||||| Sbjct: 558 tttccaatcaggctggagggacttgcatattctcatggtgttttctcaagttatgagcca 617 Query: 520 gagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaattttt 579 || || |||||||||||||| || ||||||| ||| || |||||||| || | |||||| Sbjct: 618 gaactctttcctggtctgatatatcggatgaagcaaccaaagattgttcttctgattttt 677 Query: 580 gtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttc 639 |||||||||||||||||| ||||||||||||||||||| || ||||| || || ||||| Sbjct: 678 gtttcaggcaagattgttttgaccggagcaaaggtgagggatgagacgtataccgccttt 737 Query: 640 gagaacatatatcctgtcctcacagagttcagaaaagtgcagca 683 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 738 gagaacatataccctgtgctaacggagttcagaaaagtccagca 781
>gb|L13301.1|MZETBPA Zea mays TATA-binding protein mRNA, complete cds Length = 1353 Score = 525 bits (265), Expect = e-145 Identities = 502/581 (86%) Strand = Plus / Plus Query: 109 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatatt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatatt 189 Query: 169 gtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgc 228 || || || || || |||| |||||| | ||||||||||| |||||| | || ||| | Sbjct: 190 gtatcaacagttaatttggattgtaaacttgacctcaaagcaatagctttgcaagcaaga 249 Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| ||||||||||| |||||||||||||| || |||||| | ||||||||||| ||| Sbjct: 250 aatgcggagtataacccaaagcgttttgctgcagtaatcatgagaataagagaacccaaa 309 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || ||| |||||||||| || || |||||||| || |||||||| || ||||| ||| Sbjct: 310 accacggcactgatatttgcatcgggtaaaatggtatgtactggagctaagagcgagcag 369 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 370 caatctaagcttgcagcaagaaagtatgctcgtattattcagaaacttggttttccagct 429 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 |||||||||||||| ||||| |||||||| |||| |||||||||||| || || || || Sbjct: 430 aaattcaaggactttaagattcagaatattgttggctcttgtgatgtaaagtttccaatt 489 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||||||||| || |||||||||||||| ||||||||||| || ||||| || ||| Sbjct: 490 aggcttgagggccttgcctattctcatggtgccttctcaagttacgaaccagaactcttt 549 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 ||||| || || || ||||||| || || |||||||| || |||||||||||||||||| Sbjct: 550 cctggccttatctatcggatgaaacaaccaaagattgttcttttaatttttgtttcaggc 609 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcgagaacata 648 ||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 610 aagattgttttgactggagcaaaggtgagagaggagacctacactgccttcgaaaacatc 669 Query: 649 tatcctgtcctcacagagttcagaaaagtgcagcaatgatg 689 |||||||| || ||||||| ||||||| ||||||||||| Sbjct: 670 tatcctgtgctggcagagtttcgaaaagttcagcaatgatg 710
>gb|L13302.1|MZETBPB Zea mays TATA-binding protein mRNA, complete cds Length = 1400 Score = 482 bits (243), Expect = e-132 Identities = 501/587 (85%) Strand = Plus / Plus Query: 103 gaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 191 gagggcagccagccggtggatctgtccaagcacccctctggcatcgtccccacgctccag 250 Query: 163 aatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccag 222 ||||| || || || || || |||| |||||| | ||||||||||| |||||| | || Sbjct: 251 aatatcgtatcaacagttaatttggattgtaaacttgacctcaaagcaatagctttgcaa 310 Query: 223 gcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaa 282 ||||| ||||| ||||||||||| |||||||||||||| || |||||| | ||||||||| Sbjct: 311 gcacgaaatgcggagtataacccaaagcgttttgctgcagtcatcatgagaataagagaa 370 Query: 283 ccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagc 342 || ||||| || ||| |||||||||| || || |||||||| || |||||||| || || Sbjct: 371 cccaaaaccacagcactgatatttgcatcgggtaaaatggtatgtactggagcgaagagt 430 Query: 343 gaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggcttt 402 ||||||||||| ||||| ||||| || |||||||| || || || ||||| ||||| ||| Sbjct: 431 gaacagcaatccaagcttgcagcaaggaagtatgcccgcattattcagaaacttggtttt 490 Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 || || || || ||||| || ||||| |||||||| |||| ||||||||||||||| || Sbjct: 491 ccagctaagtttaaggattttaagattcagaatattgttggctcttgtgatgtcaagttt 550 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 || || |||||||||||||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 551 ccaattaggcttgagggccttgcatattctcatggtgccttctcaagttacgaaccagaa 610 Query: 523 ctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtt 582 || |||||||| || || || ||||||| || || |||||||| || |||||||||||| Sbjct: 611 ctctttcctggccttatctatcggatgaaacaaccaaagattgttcttttaatttttgtt 670 Query: 583 tcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcgag 642 ||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 671 tcaggcaagattgttttgactggagcaaaggtgagagaggagacctacactgccttcgaa 730 Query: 643 aacatatatcctgtcctcacagagttcagaaaagtgcagcaatgatg 689 ||||| |||||||| || ||||||| |||||| | ||||||||||| Sbjct: 731 aacatctatcctgtactgtcagagtttagaaaaattcagcaatgatg 777
>gb|AY109414.1| Zea mays CL2004_1 mRNA sequence Length = 1400 Score = 349 bits (176), Expect = 1e-92 Identities = 380/448 (84%) Strand = Plus / Plus Query: 103 gaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 191 gagggcagccagccggtggatctgtccaagcacccctctggcatcgtccccacgctccag 250 Query: 163 aatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccag 222 ||||| || || || || || |||| |||||| | ||||||||||| |||||| | || Sbjct: 251 aatatcgtatcaacagttaatttggattgtaaacttgacctcaaagcaatagctttgcaa 310 Query: 223 gcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaa 282 ||||| ||||| ||||||||||| |||||||||||||| || |||||| | ||||||||| Sbjct: 311 gcacgaaatgcggagtataacccaaagcgttttgctgcagtcatcatgagaataagagaa 370 Query: 283 ccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagc 342 || ||||| || ||| |||||||||| || || |||||||| || |||||||| || || Sbjct: 371 cccaaaaccacggcactgatatttgcatcgggtaaaatggtatgtactggagcgaagagt 430 Query: 343 gaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggcttt 402 ||||||||||| ||||| ||||| || |||||||| || || || ||||| ||||| ||| Sbjct: 431 gaacagcaatccaagcttgcagcaaggaagtatgcccgcattattcagaaacttggtttt 490 Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 || || || || ||||| || ||||| |||||||| |||| ||||||||||||||| || Sbjct: 491 ccagctaagtttaaggattttaagattcagaatattgttggctcttgtgatgtcaagttt 550 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 || || |||||||||||||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 551 ccaattaggcttgagggccttgcatattctcatggtgccttctcaagttacgaaccagaa 610 Query: 523 ctatttcctggtctgatttaccggatga 550 || |||||||| || || || ||||||| Sbjct: 611 ctctttcctggccttatctatcggatga 638 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 586 ggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcgagaac 645 |||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 674 ggcaagattgttttgactggagcaaaggtgagagaggagacctacactgccttcgaaaac 733 Query: 646 atatatcctgtcctcacagagttcagaaaagtgcagcaatgatg 689 || |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 734 atctatcctgtactgtcagagtttagaaaagttcagcaatgatg 777
>gb|AF015784.1|AF015784 Phaseolus vulgaris TATA-box binding protein (PVTBP1) mRNA, complete cds Length = 829 Score = 339 bits (171), Expect = 1e-89 Identities = 441/531 (83%) Strand = Plus / Plus Query: 145 atcgtccccacgctccagaatattgtgtcgacggtcaacctggactgtaaattggacctc 204 ||||| ||||| || || ||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 100 atcgtgcccacccttcaaaatattgtgtccacggtcaatttggattgtaaattggacctc 159 Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||| | || || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 160 aaaacaattgcactacaagctcgtaacgctgagtacaatcccaagcgttttgctgctgtt 219 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||||||||| || ||||| || ||| | |||||||| || ||||| |||||| Sbjct: 220 attatgaggataagagagcccaaaacaactgcactaatatttgcttctggaaagatggtt 279 Query: 325 tgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaagtatgctcgtata 384 || |||||||| || || ||||| || ||||| | |||||||| |||||||||||||| Sbjct: 280 tgtactggagctaagagtgaacaacagtctaaattggcagccaggaagtatgctcgtatc 339 Query: 385 atccagaagcttggctttcctgcaaaattcaaggacttcaagatccagaatatagttgcc 444 ||||| |||||||| || ||||| ||||| ||||| ||||| || ||||| || |||| | Sbjct: 340 atccaaaagcttggtttccctgccaaatttaaggatttcaaaattcagaacattgttggc 399 Query: 445 tcttgtgatgtcaaattccctatcaggcttgagggcctcgcatattctcatggtgctttc 504 ||||||||||||||||| || || |||| ||||| || ||||||||||||||||||||| Sbjct: 400 tcttgtgatgtcaaatttcccatacggctggagggtcttgcatattctcatggtgctttc 459 Query: 505 tcaagttatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagatt 564 ||||||||||| |||||| | ||||| ||| | || ||||| |||| ||| || || || Sbjct: 460 tcaagttatgaaccagagttgtttccgggtttaatctaccgaatgaagcaacccaaaata 519 Query: 565 gtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaaggtgagagaagag 624 || | | || ||||| ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 520 gtgttgcttatatttgtctcaggaaagattgttctgaccggagctaaggtgagagatgaa 579 Query: 625 acatacactgccttcgagaacatatatcctgtcctcacagagttcagaaaa 675 |||||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 580 acatacacagcctttgagaacatatatcctgtacttactgagttcagaaaa 630
>ref|NM_001071203.1| Oryza sativa (japonica cultivar-group) Os10g0432300 (Os10g0432300) mRNA, complete cds Length = 1186 Score = 325 bits (164), Expect = 2e-85 Identities = 413/496 (83%) Strand = Plus / Plus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatattgtgt 172 ||||||||||||| | ||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 240 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagaacattgttt 299 Query: 173 cgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaatg 232 |||| || || |||||||| | ||||| || ||| || ||||| ||||| || |||| Sbjct: 300 cgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatg 359 Query: 233 cagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaacta 292 ||||||| ||||| |||||||||||||| ||||||||| ||||||| || ||||| || | Sbjct: 360 cagagtacaacccaaagcgttttgctgcagttatcatgaggataagggacccaaagacaa 419 Query: 293 ccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaat 352 | || |||||||||| || ||||| |||||||||||||||||||| |||||| | || | Sbjct: 420 cagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaagaccatt 479 Query: 353 ctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaat 412 | ||||| || || || |||||||| || || |||| ||||||||||| || ||||| | Sbjct: 480 caaagcttgctgcgaggaagtatgcgcgaatcgtccaaaagcttggcttcccagcaaagt 539 Query: 413 tcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggc 472 ||||||| |||||||||||||| || |||| || |||||||||||||| ||||| | | Sbjct: 540 tcaaggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcc 599 Query: 473 ttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctatttcctg 532 | |||||||| || ||||||||||| || ||||| ||||||||||||||||| || |||| Sbjct: 600 tggagggccttgcttattctcatggcgcattctctagttatgagccagagctcttccctg 659 Query: 533 gtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggcaaga 592 | |||||||||||||||| |||||| |||||||| || | |||||||| || ||||||| Sbjct: 660 ggctgatttaccggatgaagcagccaaagattgtgcttctcatttttgtctctggcaaga 719 Query: 593 ttgttctgaccggagc 608 ||||||| || ||||| Sbjct: 720 ttgttctcactggagc 735
>emb|CT828414.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105L09, full insert sequence Length = 1205 Score = 321 bits (162), Expect = 3e-84 Identities = 279/318 (87%) Strand = Plus / Plus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttcaagatcc 430 ||||||||||||| ||||| |||||||||||| |||| || || |||||||||||||| | Sbjct: 577 agtatgctcgtattatccaaaagcttggctttgctgctaagtttaaggacttcaagattc 636 Query: 431 agaatatagttgcctcttgtgatgtcaaattccctatcaggcttgagggcctcgcatatt 490 |||| || |||| ||||||||||| ||||| || |||||||| ||||| || ||||||| Sbjct: 637 agaacattgttggttcttgtgatgttaaatttccaatcaggctggagggacttgcatatt 696 Query: 491 ctcatggtgctttctcaagttatgagccagagctatttcctggtctgatttaccggatga 550 |||||||||||||||||||||||||||| || || |||||||||||||| || ||||||| Sbjct: 697 ctcatggtgctttctcaagttatgagcctgaactctttcctggtctgatatatcggatga 756 Query: 551 ggcagccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaa 610 ||| ||||||||||| || | |||||||||||||||||||||||| |||||||||||| Sbjct: 757 agcaaccgaagattgttcttctgatttttgtttcaggcaagattgttttgaccggagcaa 816 Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 ||||||| || ||||| || || ||||| ||||||||||| ||||| || |||||||||| Sbjct: 817 aggtgagggatgagacgtataccgcctttgagaacatataccctgtgctaacagagttca 876 Query: 671 gaaaagtgcagcaatgat 688 ||||||| |||||||||| Sbjct: 877 gaaaagtccagcaatgat 894 Score = 240 bits (121), Expect = 1e-59 Identities = 235/273 (86%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 238 ctggaggggagcgagcccgtggacctggtcaagcacccctccggcatcatccccacgctc 297 Query: 160 cagaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctc 219 || || || |||||||||||||| |||| || ||||| |||||||||||||||||| | Sbjct: 298 caaaacatcgtgtcgacggtcaatttggattgcaaattagacctcaaagctatagctttg 357 Query: 220 caggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataaga 279 || |||||||||||||| ||||| || |||||||||||||| ||||||||| | |||||| Sbjct: 358 caagcacgcaatgcagaatataatccaaagcgttttgctgcagttatcatgagaataaga 417 Query: 280 gaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||| |||||||| || |||||||||| || || |||||||| || ||||| ||||| Sbjct: 418 gaaccgaaaactacagctctgatatttgcatcgggtaaaatggtatgtactggggcaaag 477 Query: 340 agcgaacagcaatctaagctcgcagccagaaag 372 |||||||| ||||| ||||| ||||| |||||| Sbjct: 478 agcgaacaacaatcaaagcttgcagcaagaaag 510
>dbj|AK108240.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G12, full insert sequence Length = 1186 Score = 317 bits (160), Expect = 5e-83 Identities = 412/496 (83%) Strand = Plus / Plus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatattgtgt 172 ||||||||||||| | ||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 240 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagaacattgttt 299 Query: 173 cgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaatg 232 |||| || || |||||||| | ||||| || ||| || ||||| ||||| || |||| Sbjct: 300 cgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatg 359 Query: 233 cagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaacta 292 ||||||| ||||| |||||||||||||| ||||||||| ||||||| || ||||| || | Sbjct: 360 cagagtacaacccaaagcgttttgctgcagttatcatgaggataagggacccaaagacaa 419 Query: 293 ccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaat 352 | || |||||||||| || ||||| |||||||||||||||||||| |||||| | || | Sbjct: 420 cagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaagaccatt 479 Query: 353 ctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaat 412 | ||||| || || || |||||||| || || |||| ||||||||||| || ||||| | Sbjct: 480 caaagcttgctgcgaggaagtatgcgcgaatcgtccaaaagcttggcttcccagcaaagt 539 Query: 413 tcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggc 472 ||||||| |||||||||||||| || |||| || |||||||||||||| ||||| | | Sbjct: 540 tcaaggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcc 599 Query: 473 ttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctatttcctg 532 | ||||||| || ||||||||||| || ||||| ||||||||||||||||| || |||| Sbjct: 600 tggagggccatgcttattctcatggcgcattctctagttatgagccagagctcttccctg 659 Query: 533 gtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggcaaga 592 | |||||||||||||||| |||||| |||||||| || | |||||||| || ||||||| Sbjct: 660 ggctgatttaccggatgaagcagccaaagattgtgcttctcatttttgtctctggcaaga 719 Query: 593 ttgttctgaccggagc 608 ||||||| || ||||| Sbjct: 720 ttgttctcactggagc 735
>gb|AF015785.1|AF015785 Phaseolus vulgaris TATA-box binding protein (PVTBP2) mRNA, complete cds Length = 837 Score = 309 bits (156), Expect = 1e-80 Identities = 456/556 (82%) Strand = Plus / Plus Query: 101 tggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctcc 160 |||| |||| ||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 33 tggaagggaaccagccggtggatctacagaagcatccttctgggatcgtgcccacccttc 92 Query: 161 agaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctcc 220 | ||||||||||| || ||||| |||||||||| |||||||||||| | || || || | Sbjct: 93 aaaatattgtgtccaccgtcaatttggactgtaagttggacctcaaaacaattgcactac 152 Query: 221 aggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagag 280 | || || ||||| ||||| || ||||||||||||||||| ||||| ||| ||||||||| Sbjct: 153 aagctcgtaatgctgagtacaatcccaagcgttttgctgctgttattatgaggataagag 212 Query: 281 aaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaa 340 | || ||||| || ||| | || ||||| || || || |||||||| |||||||| || | Sbjct: 213 agcccaaaacaactgcacttatttttgcttctggcaagatggtttgtactggagctaaga 272 Query: 341 gcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggct 400 | ||||| || ||||| | |||||||| |||||||||||||| ||||| |||||||| | Sbjct: 273 gtgaacaacagtctaaattggcagccaggaagtatgctcgtatcatccaaaagcttggtt 332 Query: 401 ttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaat 460 | ||||| ||||| ||||| ||||| || ||||| || |||| ||||||||||||||| | Sbjct: 333 tccctgccaaatttaaggatttcaaaattcagaacattgttggctcttgtgatgtcaagt 392 Query: 461 tccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccag 520 |||| || | || ||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 393 tccccatacgactggagggtcttgcatattctcatggtgctttctcaagttatgaaccag 452 Query: 521 agctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttg 580 |||| ||||| ||||| || ||||| |||| ||| || || || ||| | | || |||| Sbjct: 453 agctgtttccaggtctaatctaccgtatgaagcaacctaaaatagtcttacttatatttg 512 Query: 581 tttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcg 640 |||| || || |||||||| |||||||| ||||||||||| ||||| || ||||| || | Sbjct: 513 tttctggaaaaattgttctaaccggagctaaggtgagagatgagacgtatactgcgtttg 572 Query: 641 agaacatatatcctgt 656 |||||||||||||||| Sbjct: 573 agaacatatatcctgt 588
>gb|L28002.1|SOYSTBP Glycine max TATA-box binding protein (STBP1) mRNA, complete cds Length = 1070 Score = 268 bits (135), Expect = 4e-68 Identities = 462/571 (80%) Strand = Plus / Plus Query: 101 tggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctcc 160 |||| |||||||||||||||||||| ||||| || || || ||||| || || || | Sbjct: 191 tggaagggagccagccggtggatctacagaagcatccttctgggatcgtgcctacccttc 250 Query: 161 agaatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctcc 220 | ||||||||||| || ||||| |||||||||| |||||||||||| | || || || | Sbjct: 251 aaaatattgtgtccacagtcaatttggactgtaagttggacctcaaaacaattgcacttc 310 Query: 221 aggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagag 280 | || || ||||||||||| || ||||||||||||||||| || || ||| ||||||||| Sbjct: 311 aagctcgtaatgcagagtacaatcccaagcgttttgctgctgtcattatgaggataagag 370 Query: 281 aaccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaa 340 | || ||||| || ||| | || ||||| || || || |||||||| |||||||| || | Sbjct: 371 atcccaaaacaactgcacttatttttgcttctggcaagatggtttgtactggagctaaga 430 Query: 341 gcgaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggct 400 | ||||| || ||||| | ||||| || |||||||||||||| ||||| |||||||||| Sbjct: 431 gtgaacaacagtctaaattggcagcaaggaagtatgctcgtattatccaaaagcttggct 490 Query: 401 ttcctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaat 460 | || || ||||| ||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 491 tcccagccaaatttaaggatttcaaaattcagaacattgtcggctcttgtgatgtcaagt 550 Query: 461 tccctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccag 520 |||| || |||| ||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 551 tccccatacggctggagggtcttgcatattcccatggtgctttctcaagttatgaaccag 610 Query: 521 agctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttg 580 |||| ||||| || || || ||||| |||| ||| || || || || | | || |||| Sbjct: 611 agctgtttccagggctaatctaccgtatgaagcaacctaaaatagttttgcttatatttg 670 Query: 581 tttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcg 640 | || || || |||||||| || ||||| ||||||||||| ||||| ||||||||||| | Sbjct: 671 tctctggaaaaattgttctaacaggagccaaggtgagagatgagacttacactgcctttg 730 Query: 641 agaacatatatcctgtcctcacagagttcag 671 | ||||||||||| || || || |||||||| Sbjct: 731 aaaacatatatcccgtgcttactgagttcag 761
>gb|U25275.1|MCU25275 Mesembryanthemum crystallinum TATA-binding protein mRNA, complete cds Length = 1221 Score = 266 bits (134), Expect = 2e-67 Identities = 440/542 (81%) Strand = Plus / Plus Query: 130 aagcacccctccggcatcgtccccacgctccagaatattgtgtcgacggtcaacctggac 189 |||||||| || || |||||||| ||||| ||||||||||| || || || ||| ||||| Sbjct: 365 aagcacccatctgggatcgtcccgacgctgcagaatattgtctcaactgtaaacttggac 424 Query: 190 tgtaaattggacctcaaagctatagctctccaggcacgcaatgcagagtataaccccaag 249 || |||||||| || ||||| || || || || || || || ||||| |||||||| ||| Sbjct: 425 tgcaaattggatctgaaagccattgcactgcaagctcgtaacgcagaatataacccaaag 484 Query: 250 cgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcc 309 ||||||||||| ||||| ||| ||||||| || ||||| || || || || |||||||| Sbjct: 485 cgttttgctgccgttattatgaggataagggagccaaagaccactgctttaatatttgct 544 Query: 310 tcaggaaaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccaga 369 || || ||||||||||| || ||||| || || || || ||||| || || ||||| | Sbjct: 545 tccggcaaaatggtttgtacgggagctaagagtgagcaacaatcaaaacttgcagctcgt 604 Query: 370 aagtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttcaagatc 429 ||||||||||| || || |||||||| || |||||||||||||| ||||| ||||| ||| Sbjct: 605 aagtatgctcgaattattcagaagctgggatttcctgcaaaatttaaggatttcaaaatc 664 Query: 430 cagaatatagttgcctcttgtgatgtcaaattccctatcaggcttgagggcctcgcatat 489 ||||| ||||| | ||||| ||||||||||| ||||| || || ||||| || || ||| Sbjct: 665 cagaacatagtgggatcttgcgatgtcaaatttcctattagactggaggggcttgcgtat 724 Query: 490 tctcatggtgctttctcaagttatgagccagagctatttcctggtctgatttaccggatg 549 ||||| ||||| || || |||||||| |||||||| || || || |||| || |||||| Sbjct: 725 tctcacggtgccttttctagttatgaaccagagctgttcccaggcttgatctatcggatg 784 Query: 550 aggcagccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagca 609 | || || |||||||| || | || ||||| ||||| ||||||||| |||| ||||| Sbjct: 785 aaacaaccaaagattgtgctacttatatttgtatcaggaaagattgttttgacaggagct 844 Query: 610 aaggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttc 669 |||||| |||||||||| ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 845 aaggtgcgagaagagacctacaccgcctttgagaacatatatcctgtgcttactgagttc 904 Query: 670 ag 671 || Sbjct: 905 ag 906
>emb|X59874.1|TATFIID T.aestivum L. mRNA for TATA binding protein (TFIID) Length = 1145 Score = 262 bits (132), Expect = 3e-66 Identities = 435/536 (81%) Strand = Plus / Plus Query: 112 cagccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatattgtg 171 |||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||| Sbjct: 245 cagccggtggatctcgccaggcacccctccggcatcgtcccggtcctccagaacattgtg 304 Query: 172 tcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaat 231 || || || || |||||||| | ||||| || ||| || || | ||||| || ||| Sbjct: 305 tcaactgttaatctggactgcaggttggatctgaaacaaattgccttacaggcccgtaat 364 Query: 232 gcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaact 291 |||||||| ||||| ||||||||||| |||||||||||| ||||||| || || || || Sbjct: 365 gcagagtacaacccaaagcgttttgcagcggttatcatgaggataagggaccccaagaca 424 Query: 292 accgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaa 351 || || | |||||||| |||||||| ||||| |||||||||||||| || ||| | || Sbjct: 425 acagctcttatatttgcttcaggaaagatggtatgcactggagcaaagagtgaagaacac 484 Query: 352 tctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaa 411 || ||||| || ||||| |||||||| || || |||| ||||||||||| || || | | Sbjct: 485 tcgaagcttgctgccaggaagtatgcacgaattgtccaaaagcttggcttcccagctaca 544 Query: 412 ttcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcagg 471 ||||||||||||||||||||||| || || ||||| ||||| || ||||| || || | Sbjct: 545 ttcaaggacttcaagatccagaacattgtcgcctcatgtgacgtgaaatttcccattcgt 604 Query: 472 cttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctatttcct 531 || |||||||| || ||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 605 ctcgagggccttgcttattcccatggtgccttctccagttatgagccagagctctttcct 664 Query: 532 ggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggcaag 591 || |||||||||| |||| ||||| |||||||||||| | | ||||| || || ||| Sbjct: 665 gggttgatttaccgtatgaaacagccaaagattgtcctccttgtatttgtctctggaaag 724 Query: 592 attgttctgaccggagcaaaggtgagagaagagacatacactgccttcgagaacat 647 |||||||| || ||||| |||||| | || |||| ||| ||||||| |||||||| Sbjct: 725 attgttctcacgggagctaaggtgcgcgatgagatatatgctgcctttgagaacat 780
>emb|X62494.1|STTATABP S.tuberosum mRNA for TATA-binding protein Length = 1148 Score = 256 bits (129), Expect = 2e-64 Identities = 459/569 (80%) Strand = Plus / Plus Query: 103 gaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 |||||||||||||| |||||||| |||||||||| || || || ||||| || || ||| Sbjct: 228 gaggggagccagccagtggatcttaccaagcacccttctggaatagtccctactctgcag 287 Query: 163 aatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccag 222 |||||||| || ||||| || ||||||| || |||||||| |||||||| || || || Sbjct: 288 aatattgtctcaacggttaatttggactgcaagttggacctgaaagctattgcacttcaa 347 Query: 223 gcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaa 282 || || ||||||||||| || || |||||||||||||| || |||||| | || |||||| Sbjct: 348 gctcgaaatgcagagtacaatccgaagcgttttgctgcagtgatcatgagaattagagaa 407 Query: 283 ccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagc 342 ||||||||||| || ||||| || || || || ||||||||||| |||||||| ||||| Sbjct: 408 ccaaaaactacagcgttgattttcgcttctgggaaaatggtttgtactggagccaaaagt 467 Query: 343 gaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggcttt 402 ||||| || || ||| | |||||| | || |||||| | || || || |||||||| ||| Sbjct: 468 gaacaacagtcaaagttggcagcccggaaatatgctagaatcattcaaaagcttggtttt 527 Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 || || || || ||||| || || |||||||||||||||| ||||||||||| ||||| Sbjct: 528 ccagccaagtttaaggattttaaaatccagaatatagttggttcttgtgatgttaaattt 587 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| | ||||| ||||| |||||| | || ||||||||||||||||| |||||||| Sbjct: 588 cctattcgacttgaaggccttgcatatgcccacggtgctttctcaagttacgagccagaa 647 Query: 523 ctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtt 582 ||||||||||| | || || || |||| || || || || || || | ||||||||| Sbjct: 648 ctatttcctggattaatatatcgcatgaaacaaccaaaaatagtgctgcttatttttgtt 707 Query: 583 tcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcgag 642 || || || ||||| | || ||||| ||||| ||||| |||||||| |||||||| ||| Sbjct: 708 tctgggaaaattgtcatcacaggagccaaggttagagatgagacatatactgcctttgag 767 Query: 643 aacatatatcctgtcctcacagagttcag 671 |||||||| || || || || |||||||| Sbjct: 768 aacatatacccagttcttaccgagttcag 796
>gb|BT023969.1| Zea mays clone EL01N0404F02 mRNA sequence Length = 1382 Score = 250 bits (126), Expect = 1e-62 Identities = 258/302 (85%) Strand = Plus / Plus Query: 103 gaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 242 gagggcagccagccggtggatctgtccaagcacccctctggcatcgtccccacgctccag 301 Query: 163 aatattgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccag 222 ||||| || || || || || |||| |||||| | ||||||||||| |||||| | || Sbjct: 302 aatatcgtatcaacagttaatttggattgtaaacttgacctcaaagcaatagctttgcaa 361 Query: 223 gcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaa 282 ||||| ||||| ||||||||||| |||||||||||||| || |||||| | ||||||||| Sbjct: 362 gcacgaaatgcggagtataacccaaagcgttttgctgcagtcatcatgagaataagagaa 421 Query: 283 ccaaaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagc 342 || ||||| || ||| |||||||||| || || |||||||| || |||||||| || || Sbjct: 422 cccaaaaccacggcactgatatttgcatcgggtaaaatggtatgtactggagcgaagagt 481 Query: 343 gaacagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggcttt 402 ||||||||||| ||||| ||||| ||||||||||| || || || ||||| ||||| ||| Sbjct: 482 gaacagcaatccaagcttgcagcaagaaagtatgcccgcattattcagaaacttggtttt 541 Query: 403 cc 404 || Sbjct: 542 cc 543 Score = 147 bits (74), Expect = 1e-31 Identities = 149/174 (85%) Strand = Plus / Plus Query: 517 ccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatt 576 ||||| || |||||||| || || || ||||||| || || |||||||| || |||||| Sbjct: 832 ccagaactctttcctggccttatctatcggatgaaacaaccaaagattgttcttttaatt 891 Query: 577 tttgtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgcc 636 ||||||||||||||||||||| |||| |||||||||||||| || ||||| ||||||||| Sbjct: 892 tttgtttcaggcaagattgttttgactggagcaaaggtgagggaggagacctacactgcc 951 Query: 637 ttcgagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatgatgg 690 ||||| ||||| |||||||| || ||||||| |||||| | |||||||||||| Sbjct: 952 ttcgaaaacatctatcctgtactgtcagagtttagaaaaattcagcaatgatgg 1005 Score = 101 bits (51), Expect = 6e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 424 aagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttgagggcctc 483 ||||| |||||||| |||| ||||||||||||||| || || || |||||||||||||| Sbjct: 644 aagattcagaatattgttggctcttgtgatgtcaagtttccaattaggcttgagggcctt 703 Query: 484 gcatattctcatggtgctttctcaagt 510 ||||||||||||||||| ||||||||| Sbjct: 704 gcatattctcatggtgccttctcaagt 730
>dbj|D86722.1| Nicotiana tabacum mRNA for TATA binding protein (TBP), complete cds Length = 1240 Score = 218 bits (110), Expect = 4e-53 Identities = 452/566 (79%) Strand = Plus / Plus Query: 106 gggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaat 165 |||| |||||| |||||| |||| |||||||| || || || || || || || |||||| Sbjct: 400 gggaaccagccagtggatttgtctaagcacccatctgggattgtgcctactcttcagaat 459 Query: 166 attgtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggca 225 || || || || |||||| |||| || || ||||| || |||||||| || | || ||| Sbjct: 460 atcgtctcaactgtcaacttggattgcaagttggatcttaaagctattgcattgcaagca 519 Query: 226 cgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaacca 285 || ||||| || || || || |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 520 cgtaatgctgaatacaatccaaagcgttttgctgctgttattatgaggataagagaacca 579 Query: 286 aaaactaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaa 345 || ||||| || ||||| || || || ||||| ||||||||||| || ||||| || ||| Sbjct: 580 aagactacagctttgattttcgcatctggaaagatggtttgcaccggggcaaagagtgaa 639 Query: 346 cagcaatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcct 405 || ||||||||| ||||| || |||||||| | |||||||||||||| || || | Sbjct: 640 caatcatctaagcttgcagcaaggaagtatgcaaggataatccagaagctcgggttcgat 699 Query: 406 gcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccct 465 || ||||| ||||| |||||||| ||||||||||||| || |||||||| ||||| || Sbjct: 700 gccaaatttaaggatttcaagattcagaatatagttggatcctgtgatgtgaaatttccc 759 Query: 466 atcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagcta 525 || || ||||| || | || || || ||||||||||| ||||||||||| ||||| | Sbjct: 760 attagacttgaaggtttggcctactcgcatggtgctttttcaagttatgaaccagaattg 819 Query: 526 tttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttca 585 ||||| || |||| ||||| |||| ||| || |||||||| || | |||||||| || Sbjct: 820 tttccaggattgatataccgaatgaagcaacccaagattgtgctgctcatttttgtgtct 879 Query: 586 ggcaagattgttctgaccggagcaaaggtgagagaagagacatacactgccttcgagaac 645 ||||||||||| || || ||||| |||||| | || |||||||| ||||| || |||||| Sbjct: 880 ggcaagattgtcctcactggagcgaaggtgcgggatgagacatatactgcttttgagaac 939 Query: 646 atatatcctgtcctcacagagttcag 671 || || ||||| || ||||||||||| Sbjct: 940 atctaccctgtgcttacagagttcag 965
>dbj|AK227470.1| Arabidopsis thaliana mRNA for transcription initiation factor TFIID-2, complete cds, clone: RAFL14-10-I06 Length = 1235 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 431 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 490 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 491 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 550 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 551 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 610 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 611 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 670 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 671 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 730 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 731 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 790 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 791 aagattgttataactggagccaagatgagagaagagac 828
>ref|NM_104427.2| Arabidopsis thaliana TBP2; DNA binding / RNA polymerase II transcription factor (TBP2) mRNA, complete cds Length = 1205 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 411 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 470 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 471 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 530 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 531 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 590 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 591 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 650 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 651 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 710 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 711 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 770 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 771 aagattgttataactggagccaagatgagagaagagac 808
>ref|NM_179481.1| Arabidopsis thaliana TBP2; DNA binding / RNA polymerase II transcription factor (TBP2) mRNA, complete cds Length = 1208 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 411 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 470 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 471 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 530 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 531 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 590 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 591 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 650 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 651 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 710 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 711 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 770 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 771 aagattgttataactggagccaagatgagagaagagac 808
>gb|AY463626.1| Arabidopsis thaliana TBP2 (TBP2) mRNA, partial cds Length = 600 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 145 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 204 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 205 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 264 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 265 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 324 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 325 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 384 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 385 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 444 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 445 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 504 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 505 aagattgttataactggagccaagatgagagaagagac 542
>gb|BT006488.1| Arabidopsis thaliana At1g55520 gene, complete cds Length = 603 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 145 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 204 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 205 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 264 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 265 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 324 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 325 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 384 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 385 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 444 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 445 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 504 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 505 aagattgttataactggagccaagatgagagaagagac 542
>emb|X54995.1|ATTFIIDA A.thaliana (clone At-1) TFIID mRNA for transcription initiation factor II Length = 1193 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||| ||||| || |||||| |||| ||||| ||||| Sbjct: 399 aatgctgaatataaccccaagcgtttcgctgctgtaatcatgaggatcagagagccaaag 458 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 459 accacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 518 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 519 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 578 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 579 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 638 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 639 aggcttgaaggtcttgcatactctcatagtgctttctcaagttacgagcctgagctattt 698 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 699 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 758 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 759 aagattgttataactggagccaagatgagagaagagac 796
>emb|BX816719.1|CNS0AD78 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 202 bits (102), Expect = 2e-48 Identities = 324/398 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||||||||||||||||||||| || |||||| |||| ||||| ||||| Sbjct: 399 aatgctgaatataaccccaagcgttttgctgctgtaatcatgaggatcagagagccaaag 458 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || || || ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 459 acaacagcgttaatttttgcttctgggaaaatggtgtgtaccggagctaaaagtgaacat 518 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 | || ||||| || || |||||||||||||| || | || |||||||||||||||||| Sbjct: 519 ctttcaaagcttgctgcaagaaagtatgctcggattgttcaaaagcttggctttcctgca 578 Query: 409 aaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatc 468 || |||||||| || ||||| ||||| || || | ||| ||||||||||||||||| || Sbjct: 579 aagttcaaggattttaagatacagaacattgtaggctcatgtgatgtcaaattccccatt 638 Query: 469 aggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagagctattt 528 |||||||| || || ||||| |||||| |||||||||||||||| ||||| ||| ||||| Sbjct: 639 aggcttgaaggtctagcatactctcatagtgctttctcaagttacgagcctgagatattt 698 Query: 529 cctggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggc 588 || || |||| || |||||| | || |||||||| || | |||||||| ||||| Sbjct: 699 ccaggattgatatataggatgaaacttccaaagattgtactgcttatttttgtgtcagga 758 Query: 589 aagattgttctgaccggagcaaaggtgagagaagagac 626 ||||||||| | || ||||| ||| ||||||||||||| Sbjct: 759 aagattgttataactggagccaagatgagagaagagac 796
>emb|CT831397.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN050B08, full insert sequence Length = 1202 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Plus Query: 386 tccagaagcttggctttcctgcaaaattcaaggacttcaagatccagaatatagttgcct 445 |||| ||||||||||| || ||||| |||||||| |||||||||||||| || |||| | Sbjct: 665 tccaaaagcttggcttcccagcaaagttcaaggatttcaagatccagaacattgttggtt 724 Query: 446 cttgtgatgtcaaattccctatcaggcttgagggcctcgcatattctcatggtgctttct 505 | |||||||||||||| ||||| | || |||||||| || ||||||||||| || |||| Sbjct: 725 catgtgatgtcaaatttcctattcgcctggagggccttgcttattctcatggcgcattct 784 Query: 506 caagttatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattg 565 | ||||||||||||||||| || ||||| |||||||||||||||| |||||| ||||||| Sbjct: 785 ctagttatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattg 844 Query: 566 tcctcttaatttttgtttcaggcaagattgttctgaccggagc 608 | || | |||||||| || |||||||||||||| || ||||| Sbjct: 845 tgcttctcatttttgtctctggcaagattgttctcactggagc 887 Score = 161 bits (81), Expect = 7e-36 Identities = 195/233 (83%) Strand = Plus / Plus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatattgtgt 172 ||||||||||||| | ||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 240 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagaacattgttt 299 Query: 173 cgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaatg 232 |||| || || |||||||| | ||||| || ||| || ||||| ||||| || |||| Sbjct: 300 cgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatg 359 Query: 233 cagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaacta 292 ||||||| ||||| |||||||||||||| ||||||||| ||||||| || ||||| || | Sbjct: 360 cagagtacaacccaaagcgttttgctgcagttatcatgaggataagggacccaaagacaa 419 Query: 293 ccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaa 345 | || |||||||||| || ||||| |||||||||||||||||||| |||||| Sbjct: 420 cagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaa 472
>emb|CT831396.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102P17, full insert sequence Length = 1203 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Plus Query: 386 tccagaagcttggctttcctgcaaaattcaaggacttcaagatccagaatatagttgcct 445 |||| ||||||||||| || ||||| |||||||| |||||||||||||| || |||| | Sbjct: 662 tccaaaagcttggcttcccagcaaagttcaaggatttcaagatccagaacattgttggtt 721 Query: 446 cttgtgatgtcaaattccctatcaggcttgagggcctcgcatattctcatggtgctttct 505 | |||||||||||||| ||||| | || |||||||| || ||||||||||| || |||| Sbjct: 722 catgtgatgtcaaatttcctattcgcctggagggccttgcttattctcatggcgcattct 781 Query: 506 caagttatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattg 565 | ||||||||||||||||| || ||||| |||||||||||||||| |||||| ||||||| Sbjct: 782 ctagttatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattg 841 Query: 566 tcctcttaatttttgtttcaggcaagattgttctgaccggagc 608 | || | |||||||| || |||||||||||||| || ||||| Sbjct: 842 tgcttctcatttttgtctctggcaagattgttctcactggagc 884 Score = 161 bits (81), Expect = 7e-36 Identities = 195/233 (83%) Strand = Plus / Plus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccagaatattgtgt 172 ||||||||||||| | ||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 237 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagaacattgttt 296 Query: 173 cgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaatg 232 |||| || || |||||||| | ||||| || ||| || ||||| ||||| || |||| Sbjct: 297 cgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatg 356 Query: 233 cagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaacta 292 ||||||| ||||| |||||||||||||| ||||||||| ||||||| || ||||| || | Sbjct: 357 cagagtacaacccaaagcgttttgctgcagttatcatgaggataagggacccaaagacaa 416 Query: 293 ccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaa 345 | || |||||||||| || ||||| |||||||||||||||||||| |||||| Sbjct: 417 cagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaa 469
>ref|NM_112190.3| Arabidopsis thaliana TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor (TBP1) mRNA, complete cds Length = 1143 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 579 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 638 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 639 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 698 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 699 ctcttcccagggctgattta 718 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 381 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 440 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 441 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 500 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 501 tgtactggagctaagagcga 520
>ref|NM_001035611.1| Arabidopsis thaliana TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor (TBP1) mRNA, complete cds Length = 1324 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 579 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 638 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 639 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 698 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 699 ctcttcccagggctgattta 718 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 381 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 440 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 441 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 500 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 501 tgtactggagctaagagcga 520
>gb|AY463625.1| Arabidopsis thaliana TBP1 (At3g13445) mRNA, partial cds Length = 600 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 319 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 378 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 379 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 438 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 439 ctcttcccagggctgattta 458 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 121 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 180 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 181 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 240 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 241 tgtactggagctaagagcga 260
>gb|AF349523.1| Arabidopsis thaliana putative TATA sequence-binding transcription initiation factor protein (At3g13445) mRNA, complete cds Length = 653 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 319 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 378 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 379 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 438 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 439 ctcttcccagggctgattta 458 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 121 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 180 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 181 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 240 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 241 tgtactggagctaagagcga 260
>gb|AF327429.1| Arabidopsis thaliana putative transcription initiation factor TFIID-1 (At3g13445) mRNA, complete cds Length = 1064 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 579 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 638 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 639 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 698 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 699 ctcttcccagggctgattta 718 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 381 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 440 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 441 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 500 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 501 tgtactggagctaagagcga 520
>gb|AY072455.1| Arabidopsis thaliana transcription initiation factor TFIID-1 (At3g13460; MRP15.10) mRNA, complete cds Length = 674 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 319 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 378 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 379 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 438 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 439 ctcttcccagggctgattta 458 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 121 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 180 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 181 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 240 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 241 tgtactggagctaagagcga 260
>gb|AY054608.1| Arabidopsis thaliana transcription initiation factor TFIID-1 (TATA-box factor 1) (TATA sequence-binding protein 1) (TBP-1) (At3g13460; MRP15.10) mRNA, complete cds Length = 1047 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 579 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 638 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 639 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 698 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 699 ctcttcccagggctgattta 718 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 381 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 440 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 441 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 500 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 501 tgtactggagctaagagcga 520
>gb|AY084881.1| Arabidopsis thaliana clone 120126 mRNA, complete sequence Length = 1132 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 569 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 628 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 629 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 688 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 689 ctcttcccagggctgattta 708 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 371 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 430 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 431 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 490 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 491 tgtactggagctaagagcga 510
>gb|AF324696.2|AF324696 Arabidopsis thaliana AT3g13445 (AT3g13445/MRP15_8) mRNA, complete cds Length = 1160 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 691 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 750 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 751 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 810 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 811 ctcttcccagggctgattta 830 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 493 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 552 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 553 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 612 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 613 tgtactggagctaagagcga 632
>emb|BX825143.1|CNS0A4SJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 520 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 579 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 580 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 639 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 640 ctcttcccagggctgattta 659 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 322 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 381 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 382 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 441 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 442 tgtactggagctaagagcga 461
>emb|BX825833.1|CNS0A4OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 773 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 210 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 269 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 270 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 329 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 330 ctcttcccagggctgattta 349 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 12 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 71 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 72 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 131 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 132 tgtactggagctaagagcga 151
>emb|X54996.1|ATTFIIDB A.thaliana (clone At-2) TFIID mRNA for transcription initiation factor II Length = 1109 Score = 119 bits (60), Expect = 2e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 403 cctgcaaaattcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattc 462 ||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||| Sbjct: 546 cctgcaaaattcaaggatttcaagattcagaatattgtaggttcttgtgatgtcaaattc 605 Query: 463 cctatcaggcttgagggcctcgcatattctcatggtgctttctcaagttatgagccagag 522 ||||| || ||||| || || || || ||||| | ||||||||||||||||||||| ||| Sbjct: 606 cctataagacttgaaggtcttgcttactctcacgctgctttctcaagttatgagcccgag 665 Query: 523 ctatttcctggtctgattta 542 || || || || |||||||| Sbjct: 666 ctcttcccagggctgattta 685 Score = 103 bits (52), Expect = 1e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 205 aaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggtt 264 ||||| |||||| | ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 348 aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg 407 Query: 265 atcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || ||| |||| |||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 408 ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc 467 Query: 325 tgcactggagcaaaaagcga 344 || |||||||| || ||||| Sbjct: 468 tgtactggagctaagagcga 487
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 111 bits (56), Expect = 6e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 ||||||||||| || |||||||||||||| || ||||||| ||| || |||||||| || Sbjct: 91821 tatgagccagaactctttcctggtctgatatatcggatgaagcaaccaaagattgttctt 91762 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagcaaaggt 614 | |||||||||||||||||||||||| |||||||||||||||| Sbjct: 91761 ctgatttttgtttcaggcaagattgttttgaccggagcaaaggt 91718 Score = 101 bits (51), Expect = 6e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 |||| |||||||| ||||| || |||| |||||||||||| ||||| || |||||||| | Sbjct: 92001 aggatttcaagattcagaacattgttggctcttgtgatgttaaatttccaatcaggctgg 91942 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 |||| || ||||||||||||||||||||||||||| Sbjct: 91941 agggacttgcatattctcatggtgctttctcaagt 91907 Score = 87.7 bits (44), Expect = 9e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||| Sbjct: 93264 agcgttttgctgcggttatcatgagaataagagaaccaaaaactacagctctgatatttg 93205 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 93204 catcgggtaaaatggt 93189 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 94996 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 94937 Query: 160 cag 162 ||| Sbjct: 94936 cag 94934 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaagg 418 |||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 92144 agtacgctcgtattatccagaagcttggctttcctgctaaattcaagg 92097 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 172 tcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaat 231 ||||||||||| |||| || ||||| |||||||||||||||||| | || || |||||| Sbjct: 93947 tcgacggtcaatttggattgcaaattagacctcaaagctatagctttgcaagctcgcaat 93888 Query: 232 gcagagtataa 242 ||||| ||||| Sbjct: 93887 gcagaatataa 93877 Score = 58.0 bits (29), Expect = 8e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 ||||||| || ||||| || || ||||| ||||||||||| ||||| || || ||||||| Sbjct: 91647 aggtgagggatgagacgtataccgcctttgagaacatataccctgtgctaacggagttca 91588 Query: 671 gaaaagtgcagca 683 ||||||| ||||| Sbjct: 91587 gaaaagtccagca 91575
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 111 bits (56), Expect = 6e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 |||||||| || || |||||||||||||| || ||||||| ||| ||||||||||| || Sbjct: 24068265 tatgagcctgaactctttcctggtctgatatatcggatgaagcaaccgaagattgttctt 24068324 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagcaaaggt 614 | |||||||||||||||||||||||| |||||||||||||||| Sbjct: 24068325 ctgatttttgtttcaggcaagattgttttgaccggagcaaaggt 24068368 Score = 101 bits (51), Expect = 6e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 ||||||||||||| ||||| || |||| ||||||||||| ||||| || |||||||| | Sbjct: 24068084 aggacttcaagattcagaacattgttggttcttgtgatgttaaatttccaatcaggctgg 24068143 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 |||| || ||||||||||||||||||||||||||| Sbjct: 24068144 agggacttgcatattctcatggtgctttctcaagt 24068178 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 24065040 ctggaggggagcgagcccgtggacctggtcaagcacccctccggcatcatccccacgctc 24065099 Query: 160 cag 162 ||| Sbjct: 24065100 cag 24065102 Score = 75.8 bits (38), Expect = 3e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 169 gtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgc 228 |||||||||||||| |||| || ||||| |||||||||||||||||| | || |||||| Sbjct: 24066144 gtgtcgacggtcaatttggattgcaaattagacctcaaagctatagctttgcaagcacgc 24066203 Query: 229 aatgcagagtataa 242 |||||||| ||||| Sbjct: 24066204 aatgcagaatataa 24066217 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| ||||||||| | ||||||||||| |||||||| || ||||||||| Sbjct: 24066808 agcgttttgctgcagttatcatgagaataagagaaccgaaaactacagctctgatatttg 24066867 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 24066868 catcgggtaaaatggt 24066883 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 ||||||| || ||||| || || ||||| ||||||||||| ||||| || |||||||||| Sbjct: 24068440 aggtgagggatgagacgtataccgcctttgagaacatataccctgtgctaacagagttca 24068499 Query: 671 gaaaagtgcagcaatg 686 ||||||| |||||||| Sbjct: 24068500 gaaaagtccagcaatg 24068515 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 371 agtatgctcgtataatccagaagcttggctttcctgc 407 ||||||||||||| ||||| |||||||||||| |||| Sbjct: 24067938 agtatgctcgtattatccaaaagcttggctttgctgc 24067974
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 111 bits (56), Expect = 6e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 ||||||||||| || |||||||||||||| || ||||||| ||| || |||||||| || Sbjct: 25442848 tatgagccagaactctttcctggtctgatatatcggatgaagcaaccaaagattgttctt 25442907 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagcaaaggt 614 | |||||||||||||||||||||||| |||||||||||||||| Sbjct: 25442908 ctgatttttgtttcaggcaagattgttttgaccggagcaaaggt 25442951 Score = 101 bits (51), Expect = 6e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 |||| |||||||| ||||| || |||| |||||||||||| ||||| || |||||||| | Sbjct: 25442668 aggatttcaagattcagaacattgttggctcttgtgatgttaaatttccaatcaggctgg 25442727 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 |||| || ||||||||||||||||||||||||||| Sbjct: 25442728 agggacttgcatattctcatggtgctttctcaagt 25442762 Score = 87.7 bits (44), Expect = 9e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||| Sbjct: 25441405 agcgttttgctgcggttatcatgagaataagagaaccaaaaactacagctctgatatttg 25441464 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 25441465 catcgggtaaaatggt 25441480 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 25439673 ctggaggggagcgagcccgtggacctggccaagcacccctccggcatcatccccacgctc 25439732 Query: 160 cag 162 ||| Sbjct: 25439733 cag 25439735 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaagg 418 |||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 25442525 agtacgctcgtattatccagaagcttggctttcctgctaaattcaagg 25442572 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 172 tcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgcaat 231 ||||||||||| |||| || ||||| |||||||||||||||||| | || || |||||| Sbjct: 25440722 tcgacggtcaatttggattgcaaattagacctcaaagctatagctttgcaagctcgcaat 25440781 Query: 232 gcagagtataa 242 ||||| ||||| Sbjct: 25440782 gcagaatataa 25440792 Score = 58.0 bits (29), Expect = 8e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 ||||||| || ||||| || || ||||| ||||||||||| ||||| || || ||||||| Sbjct: 25443022 aggtgagggatgagacgtataccgcctttgagaacatataccctgtgctaacggagttca 25443081 Query: 671 gaaaagtgcagca 683 ||||||| ||||| Sbjct: 25443082 gaaaagtccagca 25443094
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 111 bits (56), Expect = 6e-21 Identities = 59/60 (98%) Strand = Plus / Minus Query: 103 gaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35705 gagggcagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 35646 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 ||||||| ||||| |||||||| |||| ||||||||||||||| || || || ||||||| Sbjct: 32653 aggactttaagattcagaatattgttggctcttgtgatgtcaagtttccaattaggcttg 32594 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 ||||||| ||||||||||||||||| ||||||||| Sbjct: 32593 agggccttgcatattctcatggtgccttctcaagt 32559 Score = 87.7 bits (44), Expect = 9e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 |||||||||| ||||| |||||||||||||| ||||| |||||||| || |||||||| | Sbjct: 32278 aggtgagagaggagacctacactgccttcgaaaacatctatcctgtactgacagagttta 32219 Query: 671 gaaaagtgcagcaatg 686 ||||||| |||||||| Sbjct: 32218 gaaaagttcagcaatg 32203 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 517 ccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatt 576 ||||| || |||||||| || || || ||||||| || || |||||||| || |||||| Sbjct: 32455 ccagaactctttcctggccttatctatcggatgaaacaaccaaagattgttcttttaatt 32396 Query: 577 tttgtttcaggcaagattgttctgaccggagcaaaggt 614 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 32395 tttgtttcaggcaagattgttttgactggagcaaaggt 32358 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 328 actggagcaaaaagcgaacagcaatctaagctcgcagccagaaag 372 ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 32909 actggagcaaagagcgaacagcaatctaagcttgcagcaagaaag 32865 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 185 tggactgtaaattggacctcaaagctatagctctccaggcacgcaatgcagagtataacc 244 |||| |||||| | ||||||||||| |||||| | || ||||| ||||| |||||||||| Sbjct: 33945 tggattgtaaacttgacctcaaagcaatagctttgcaagcacgaaatgcggagtataacc 33886 Query: 245 ccaag 249 ||||| Sbjct: 33885 ccaag 33881 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| || |||||| | ||||| ||||| ||||| || ||| ||||||||| Sbjct: 33473 agcgttttgctgcagtcatcatgagaataagggaacccaaaaccacagcactgatatttg 33414 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 33413 catcgggtaaaatggt 33398 Score = 48.1 bits (24), Expect = 0.075 Identities = 42/48 (87%) Strand = Plus / Minus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaagg 418 ||||||||||||| || ||||| ||||| |||||||| ||||| |||| Sbjct: 32780 agtatgctcgtattattcagaaacttggttttcctgctaaatttaagg 32733
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 111 bits (56), Expect = 6e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 |||||||| || || |||||||||||||| || ||||||| ||| ||||||||||| || Sbjct: 19131 tatgagcctgaactctttcctggtctgatatatcggatgaagcaaccgaagattgttctt 19072 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagcaaaggt 614 | |||||||||||||||||||||||| |||||||||||||||| Sbjct: 19071 ctgatttttgtttcaggcaagattgttttgaccggagcaaaggt 19028 Score = 101 bits (51), Expect = 6e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 ||||||||||||| ||||| || |||| ||||||||||| ||||| || |||||||| | Sbjct: 19312 aggacttcaagattcagaacattgttggttcttgtgatgttaaatttccaatcaggctgg 19253 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 |||| || ||||||||||||||||||||||||||| Sbjct: 19252 agggacttgcatattctcatggtgctttctcaagt 19218 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 100 ctggaggggagccagccggtggatctgtccaagcacccctccggcatcgtccccacgctc 159 |||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 22356 ctggaggggagcgagcccgtggacctggtcaagcacccctccggcatcatccccacgctc 22297 Query: 160 cag 162 ||| Sbjct: 22296 cag 22294 Score = 75.8 bits (38), Expect = 3e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 169 gtgtcgacggtcaacctggactgtaaattggacctcaaagctatagctctccaggcacgc 228 |||||||||||||| |||| || ||||| |||||||||||||||||| | || |||||| Sbjct: 21252 gtgtcgacggtcaatttggattgcaaattagacctcaaagctatagctttgcaagcacgc 21193 Query: 229 aatgcagagtataa 242 |||||||| ||||| Sbjct: 21192 aatgcagaatataa 21179 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 ||||||| || ||||| || || ||||| ||||||||||| ||||| || |||||||||| Sbjct: 18956 aggtgagggatgagacgtataccgcctttgagaacatataccctgtgctaacagagttca 18897 Query: 671 gaaaagtgcagcaatg 686 ||||||| |||||||| Sbjct: 18896 gaaaagtccagcaatg 18881 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| ||||||||| | ||||||||||| |||||||| || ||||||||| Sbjct: 20588 agcgttttgctgcagttatcatgagaataagagaaccgaaaactacagctctgatatttg 20529 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 20528 catcgggtaaaatggt 20513 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Minus Query: 371 agtatgctcgtataatccagaagcttggctttcctgc 407 ||||||||||||| ||||| |||||||||||| |||| Sbjct: 19458 agtatgctcgtattatccaaaagcttggctttgctgc 19422
>gb|DQ246180.1| Zea mays clone 13022 mRNA sequence Length = 617 Score = 107 bits (54), Expect = 9e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 109 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 334
>emb|X90652.1|ZMDNATBP1 Z.mays DNA for tbp1 gene Length = 7497 Score = 107 bits (54), Expect = 9e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 109 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 agccagccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 1744 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 ||||||| ||||| |||||||| |||| |||||||||||| || || || || ||||||| Sbjct: 5399 aggactttaagattcagaatattgttggctcttgtgatgtaaagtttccaattaggcttg 5458 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 ||||||| || |||||||||||||| ||||||||| Sbjct: 5459 agggccttgcctattctcatggtgccttctcaagt 5493 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 517 ccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatt 576 ||||| || |||||||| || || || ||||||| || || |||||||| || |||||| Sbjct: 5597 ccagaactctttcctggccttatctatcggatgaaacaaccaaagattgttcttttaatt 5656 Query: 577 tttgtttcaggcaagattgttctgaccggagcaaaggt 614 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 5657 tttgtttcaggcaagattgttttgactggagcaaaggt 5694 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 611 aggtgagagaagagacatacactgccttcgagaacatatatcctgtcctcacagagttca 670 |||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||||| Sbjct: 5774 aggtgagagaggagacctacactgccttcgaaaacatctatcctgtgctggcagagtttc 5833 Query: 671 gaaaagtgcagcaatg 686 ||||||| |||||||| Sbjct: 5834 gaaaagttcagcaatg 5849 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| || |||||| | ||||||||||| ||||| || ||| ||||||||| Sbjct: 4006 agcgttttgctgcagtaatcatgagaataagagaacccaaaaccacggcactgatatttg 4065 Query: 308 cctcaggaaaaatggt 323 | || || |||||||| Sbjct: 4066 catcgggtaaaatggt 4081 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 328 actggagcaaaaagcgaacagcaatctaagctcgcagccagaaag 372 |||||||| || ||||| |||||||||||||| ||||| |||||| Sbjct: 5143 actggagctaagagcgagcagcaatctaagcttgcagcaagaaag 5187 Score = 48.1 bits (24), Expect = 0.075 Identities = 42/48 (87%) Strand = Plus / Plus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaagg 418 ||||||||||||| || ||||| ||||| ||||| || |||||||||| Sbjct: 5274 agtatgctcgtattattcagaaacttggttttccagctaaattcaagg 5321 Score = 42.1 bits (21), Expect = 4.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 185 tggactgtaaattggacctcaaagctatagctctccaggcacgcaatgcagagtataacc 244 |||| |||||| | ||||||||||| |||||| | || ||| | ||||| |||||||||| Sbjct: 3555 tggattgtaaacttgacctcaaagcaatagctttgcaagcaagaaatgcggagtataacc 3614 Query: 245 c 245 | Sbjct: 3615 c 3615
>gb|U18917.1|SCE8229 Saccharomyces cerevisiae chromosome V cosmids 8229, 9115, 9132, 9981, and lambda clones 7990 and 6134 Length = 67883 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 23557 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 23616 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || || || ||||||||||| ||||||||| Sbjct: 23617 actacagctttaatttttgcctcagggaaaatggtt 23652 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 23882 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 23940
>gb|DQ332231.1| Synthetic construct Saccharomyces cerevisiae clone FLH143423.01X SPT15 gene, complete sequence Length = 723 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 271 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 330 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || || || ||||||||||| ||||||||| Sbjct: 331 actacagctttaatttttgcctcagggaaaatggtt 366 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 596 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 654
>emb|X16860.1|SCTFIID Yeast gene for transcription initiation factor IID (TFIID) Length = 1140 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 511 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 570 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || || || ||||||||||| ||||||||| Sbjct: 571 actacagctttaatttttgcctcagggaaaatggtt 606 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 836 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 894
>gb|M27135.1|YSCTFIIDA Yeast (S.cerevisiae) TATA-binding protein (TFIID) gene, complete cds Length = 2439 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 1507 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 1566 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || || || ||||||||||| ||||||||| Sbjct: 1567 actacagctttaatttttgcctcagggaaaatggtt 1602 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 1832 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 1890
>gb|M26403.1|YSCTFIID S.cerevisiae TATA-box factor (TFIID) gene, 5'flank Length = 1157 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 543 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 602 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || ||||| ||||| ||||| ||||||||| Sbjct: 603 actacagctttgatttttgcatcagggaaaatggtt 638 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 868 agccgaaaattgtgttgttaatttttgtttcagggaagattgttcttactggtgcaaag 926
>gb|M29459.1|YSCBTF1Y Yeast (S.cerevisiae) TATA box factor (BTF1Y) gene, complete cds Length = 1254 Score = 103 bits (52), Expect = 1e-18 Identities = 85/96 (88%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct: 645 aatgcagaatataaccccaagcgttttgctgctgtcatcatgcgtattagagagccaaaa 704 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| || || || ||||||||||| ||||||||| Sbjct: 705 actacagctttaatttttgcctcagggaaaatggtt 740 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 970 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 1028
>gb|BT024176.1| Zea mays clone EL01N0421E04 mRNA sequence Length = 2068 Score = 97.6 bits (49), Expect = 9e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 574 atttttgtttcaggcaagattgttctgaccggagcaaaggtgagagaagagacatacact 633 ||||||||||| ||||||||||||||||| |||| ||||||||||| ||||| |||||| Sbjct: 1794 atttttgtttccggcaagattgttctgacaagagctaaggtgagagatgagacgtacact 1853 Query: 634 gccttcgagaacatatatcctgtcctcacagagttcagaaaagtgcagcaatg 686 || || || || || ||||| ||||||| | ||||||||||||| | |||||| Sbjct: 1854 gcttttgaaaatatctatccagtcctcataaagttcagaaaagtccggcaatg 1906 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 448 tgtgatgtcaaattccctatcaggcttgagggcctcgcatattctcatggtgctttctca 507 ||||||||||||| ||| |||||||| ||||| || ||||| ||||| |||||||||||| Sbjct: 1668 tgtgatgtcaaatccccaatcaggctcgagggtcttgcatactctcacggtgctttctca 1727 Query: 508 agttatgagccagagct 524 |||||||| ||||||| Sbjct: 1728 agttatgaaacagagct 1744 Score = 71.9 bits (36), Expect = 5e-09 Identities = 58/64 (90%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 371 agtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttcaagatcc 430 |||||||||| || ||| |||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 1560 agtatgctcgcatcatc-agaagcttgggtttccagcaaaattcaaggacttcaagattc 1618 Query: 431 agaa 434 |||| Sbjct: 1619 agaa 1622
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 |||||||||||||| || ||||| |||||||||||||||| |||||| |||||||| || Sbjct: 91079 tatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattgtgctt 91020 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagc 608 | |||||||| || |||||||||||||| || ||||| Sbjct: 91019 ctcatttttgtctctggcaagattgttctcactggagc 90982 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| ||||||||| ||||||| || ||||| || || || ||||||||| Sbjct: 91733 agcgttttgctgcagttatcatgaggataagggacccaaagacaacagccctgatatttg 91674 Query: 308 cctcaggaaaaatggtttgcactggagcaaaaagcgaa 345 | || ||||| |||||||||||||||||||| |||||| Sbjct: 91673 cttcgggaaagatggtttgcactggagcaaagagcgaa 91636 Score = 61.9 bits (31), Expect = 5e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 |||| |||||||||||||| || |||| || |||||||||||||| ||||| | || | Sbjct: 91330 aggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcctgg 91271 Query: 476 agggcctcgcatattctcatggtgctttctc 506 ||||||| || ||||||||||| || ||||| Sbjct: 91270 agggccttgcttattctcatggcgcattctc 91240 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Minus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||||||||||| | ||||||||||||| ||||||||||| |||||| Sbjct: 92802 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccag 92753
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 511 tatgagccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctc 570 |||||||||||||| || ||||| |||||||||||||||| |||||| |||||||| || Sbjct: 14911301 tatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattgtgctt 14911242 Query: 571 ttaatttttgtttcaggcaagattgttctgaccggagc 608 | |||||||| || |||||||||||||| || ||||| Sbjct: 14911241 ctcatttttgtctctggcaagattgttctcactggagc 14911204 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| ||||||||| ||||||| || ||||| || || || ||||||||| Sbjct: 14911955 agcgttttgctgcagttatcatgaggataagggacccaaagacaacagccctgatatttg 14911896 Query: 308 cctcaggaaaaatggtttgcactggagcaaaaagcgaa 345 | || ||||| |||||||||||||||||||| |||||| Sbjct: 14911895 cttcgggaaagatggtttgcactggagcaaagagcgaa 14911858 Score = 61.9 bits (31), Expect = 5e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 |||| |||||||||||||| || |||| || |||||||||||||| ||||| | || | Sbjct: 14911552 aggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcctgg 14911493 Query: 476 agggcctcgcatattctcatggtgctttctc 506 ||||||| || ||||||||||| || ||||| Sbjct: 14911492 agggccttgcttattctcatggcgcattctc 14911462 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Minus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||||||||||| | ||||||||||||| ||||||||||| |||||| Sbjct: 14913024 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccag 14912975
>gb|AY158633.1| Passer domesticus TATA-box binding protein mRNA, partial cds Length = 504 Score = 87.7 bits (44), Expect = 9e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| | |||||||||||| Sbjct: 381 aatgctgaatataatcccaagcgttttgctgctgttattatgagaataagagaaccacgt 440 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| ||| ||||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 441 actactgcactgatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 496
>ref|XM_623085.2| PREDICTED: Apis mellifera similar to TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit), transcript variant 1 (LOC550692), mRNA Length = 1184 Score = 81.8 bits (41), Expect = 5e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 253 tttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcctca 312 |||||||| ||||| ||| ||||||||||||||| |||||| |||||||||||| Sbjct: 756 tttgctgcagttattatgaggataagagaaccaagaactactgcattgatatttagtagt 815 Query: 313 ggaaaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaag 372 |||||||||||||| ||||||||||| || ||| | | ||| | ||||| |||||| Sbjct: 816 ggaaaaatggtttgtactggagcaaagagtgaagaagattctcgattggcagcaagaaag 875 Query: 373 tatgctcgtataatccagaagcttggctttcctgcaaaatt 413 |||||| | || || ||||| ||||| |||||||||||||| Sbjct: 876 tatgctagaattattcagaaacttggttttcctgcaaaatt 916
>ref|XM_749515.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g10120) partial mRNA Length = 852 Score = 81.8 bits (41), Expect = 5e-12 Identities = 215/273 (78%) Strand = Plus / Plus Query: 196 ttggacctcaaagctatagctctccaggcacgcaatgcagagtataaccccaagcgtttt 255 ||||||||||| |||| || || || || || ||||||||||| ||||| |||||||| Sbjct: 310 ttggacctcaagactatcgcgcttcatgcgcgaaatgcagagtacaacccaaagcgtttc 369 Query: 256 gctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcctcagga 315 || || || |||||||| || | ||||| ||||||||||| ||||||||||||| || Sbjct: 370 gcggccgtgatcatgcgtatccgggaacccaaaactaccgcgctgatatttgcctcgggc 429 Query: 316 aaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaagtat 375 || ||||| |||||| || || ||| | | || ||||||||| |||||||||| Sbjct: 430 aagatggtcgtcactggtgcgaagtctgaagacgattccaagctcgcatccagaaagtac 489 Query: 376 gctcgtataatccagaagcttggctttcctgcaaaattcaaggacttcaagatccagaat 435 || ||||| |||||||| || ||||| ||| || |||| ||||||||||||||||| Sbjct: 490 gcgcgtattatccagaaactgggcttcaatgccaagttcaccgacttcaagatccagaac 549 Query: 436 atagttgcctcttgtgatgtcaaattccctatc 468 || || | ||||||||| |||| ||||||||| Sbjct: 550 atcgtcggctcttgtgacatcaagttccctatc 582
>ref|NM_001016339.2| Xenopus tropicalis hypothetical protein LOC549093 (LOC549093), mRNA emb|CR761393.2| Xenopus tropicalis finished cDNA, clone TEgg042d23 Length = 1681 Score = 81.8 bits (41), Expect = 5e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||||||| Sbjct: 532 aatgcagagtataaccctaagcgttttgctgccgttataatgaggatacgagaaccacgt 591 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaag 341 || || ||| | |||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 592 acaacagcacttatatttagttcagggaaaatggtatgcactggagctaaaag 644
>ref|NM_205103.1| Gallus gallus TATA box binding protein (TBP), mRNA Length = 2184 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 514 aatgctgaatataatcccaagcgttttgctgctgttattatgaggataagagaaccacgt 573 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| || | ||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 574 actactgcgcttatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 629
>gb|AF221564.1|AF221564 Gallus gallus TA-TA binding protein 1 mRNA, partial cds Length = 630 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 418 aatgctgaatataatcccaagcgttttgctgctgttattatgaggataagagaaccacgt 477 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| || | ||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 478 actactgcgcttatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 533
>gb|AF221563.1|AF221563 Gallus gallus TA-TA binding protein 1 mRNA, partial cds Length = 630 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 418 aatgctgaatataatcccaagcgttttgctgctgttattatgaggataagagaaccacgt 477 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| || | ||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 478 actactgcgcttatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 533
>dbj|D83127.1|CHKTBPOB Chicken TBP1 mRNA, complete cds Length = 2213 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 514 aatgctgaatataatcccaagcgttttgctgctgttattatgaggataagagaaccacgt 573 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| || | ||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 574 actactgcgcttatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 629
>dbj|D83126.1|CHKTBPO Chicken TBP0 mRNA, complete cds Length = 1736 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 690 aatgctgaatataatcccaagcgttttgctgctgttattatgaggataagagaaccacgt 749 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcga 344 ||||| || | ||||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 750 actactgcgcttatattcagctctggaaaaatggtgtgcacaggagcaaaaagcga 805
>ref|XM_447540.1| Candida glabrata CBS138 hypothetical protein (CAGL0I06688g) partial mRNA Length = 702 Score = 77.8 bits (39), Expect = 8e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 214 gctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcgg 273 ||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 235 gctctgcacgcacgtaatgccgagtataaccctaagcgttttgccgctgttattatgcgt 294 Query: 274 ataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || |||||||| |||||||| ||| | || |||||||| || || |||||| Sbjct: 295 atcagagaacctaaaactactgcactaatttttgcctctggtaagatggtt 345
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 77.8 bits (39), Expect = 8e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 214 gctctccaggcacgcaatgcagagtataaccccaagcgttttgctgcggttatcatgcgg 273 ||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 648475 gctctgcacgcacgtaatgccgagtataaccctaagcgttttgccgctgttattatgcgt 648416 Query: 274 ataagagaaccaaaaactaccgcattgatatttgcctcaggaaaaatggtt 324 || |||||||| |||||||| ||| | || |||||||| || || |||||| Sbjct: 648415 atcagagaacctaaaactactgcactaatttttgcctctggtaagatggtt 648365
>ref|XM_001235800.1| PREDICTED: Gallus gallus similar to TATA box binding protein (LOC776269), mRNA Length = 987 Score = 75.8 bits (38), Expect = 3e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||||||||||||||| ||| | |||||||| || |||||| |||| || |||||| | Sbjct: 532 aatgcagagtataacccaaagaggtttgctgctgtgatcatgaggatcagggaaccacga 591 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || | || || ||||||||||||||| ||||| ||||||||||| ||| || Sbjct: 592 acaacggcccttatcttcagctcaggaaaaatggtctgcacaggagcaaaaagtgaagag 651 Query: 349 caatctaagctcgcagccagaaagtatgctcgtataatccagaagcttggctttcctgca 408 || || ||||||||| || |||||||| ||| | | |||||||| || || ||||| Sbjct: 652 cagtcacggctcgcagcaaggaagtatgcacgtgtggtgcagaagctgggattccctgcc 711 Query: 409 aaattcaaggacttcaagatccagaa 434 || || |||||||||||||||||| Sbjct: 712 aagtttctggacttcaagatccagaa 737
>gb|AY389958.1| Protopterus dolloi TATA box binding protein (TBP)-associated factor mRNA, partial cds Length = 753 Score = 75.8 bits (38), Expect = 3e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 244 cccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgata 303 |||||||||||||| || ||||| ||| | ||||||||||||| ||| || ||| | || Sbjct: 365 cccaagcgttttgcagctgttattatgagaataagagaaccaagaacaactgcacttatc 424 Query: 304 tttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgca 363 || || ||||||||||||||||||||||| ||||| || ||||||| | ||| ||| Sbjct: 425 ttcagttctggaaaaatggtttgcactggagctaaaagtgaggagcaatccaggcttgca 484 Query: 364 gccagaaagtatgc 377 || ||||||||||| Sbjct: 485 gcaagaaagtatgc 498
>ref|XM_955126.1| Neurospora crassa OR74A hypothetical protein ( Chain A, Tata-Box Binding Protein (Ytbp) Complexed With Dna Containing Tata-Box ) (NCU04770.1) partial mRNA Length = 774 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 235 gagtataaccccaagcgttttgctgcggttatcatgcg 272 |||||||||||||||||||||||||||||||||||||| Sbjct: 328 gagtataaccccaagcgttttgctgcggttatcatgcg 365
>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10 Length = 77986 Score = 73.8 bits (37), Expect = 1e-09 Identities = 37/37 (100%) Strand = Plus / Minus Query: 236 agtataaccccaagcgttttgctgcggttatcatgcg 272 ||||||||||||||||||||||||||||||||||||| Sbjct: 61286 agtataaccccaagcgttttgctgcggttatcatgcg 61250
>gb|BC088819.1| Xenopus laevis hypothetical LOC503680, mRNA (cDNA clone MGC:84973 IMAGE:6324598), complete cds Length = 1249 Score = 73.8 bits (37), Expect = 1e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||| ||| Sbjct: 545 aatgcagagtataacccaaagcgttttgctgctgttataatgaggatacgagagccacgt 604 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaag 341 || || ||| | |||||| || ||||||||||| ||||||||||| ||||| Sbjct: 605 acaacagcacttatatttagttcgggaaaaatggtatgcactggagctaaaag 657
>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH138P04, complete sequence Length = 137697 Score = 73.8 bits (37), Expect = 1e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 199 gacctcaaagctatagctctccaggcacgcaatgcagagtataaccccaagcgttttgct 258 ||||| ||||| |||||| | || ||||| || || || |||||||| || ||||||||| Sbjct: 73925 gacctaaaagcgatagctttgcaagcacgtaacgccgaatataaccctaaacgttttgct 73984 Query: 259 gcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcctcaggaaaa 318 || || |||||| ||||||| ||||| || || || || |||||||||||||| |||| | Sbjct: 73985 gctgtgatcatgaggataagggaaccgaagaccacagcgttgatatttgcctcgggaaga 74044 Query: 319 atggt 323 ||||| Sbjct: 74045 atggt 74049
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 |||||||||||||||| || ||| |||| |||||||| || ||||| ||||| ||||| | Sbjct: 34730 agcgttttgctgcggtgataatgaggatcagagaaccgaagactacagcattaatattcg 34789 Query: 308 cctcaggaaaaatggt 323 ||||||| |||||||| Sbjct: 34790 cctcagggaaaatggt 34805 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 416 aggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttg 475 |||| |||||||| |||||||| || | ||||||||||||||||||||||| || |||| Sbjct: 35217 aggatttcaagattcagaatattgtaggttcttgtgatgtcaaattccctataagacttg 35276 Query: 476 agggcctcgcatattctcatggtgctttctcaagt 510 | || || || || ||||| | ||||||||||||| Sbjct: 35277 aaggtcttgcttactctcacgctgctttctcaagt 35311
>gb|AF144035.1|AF144035 Nosema locustae transcription initiation factor TFIID (TBP) gene, complete cds Length = 911 Score = 71.9 bits (36), Expect = 5e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||||||||| || || | ||||| || ||||| ||||| |||||||| |||||| Sbjct: 387 aatgcagagtataatccgaaaaggtttgcggcagttataatgcgcataagagacccaaaa 446 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacag 348 || || || |||||||||| || ||||| |||||| ||||| ||||||||||||||| Sbjct: 447 acaacagcgctgatatttgcgtctggaaagatggttgtaactggtgcaaaaagcgaacag 506
>gb|L22538.1|SPFDNABIND Spodoptera frugiperda DNA binding protein mRNA, complete cds Length = 1201 Score = 71.9 bits (36), Expect = 5e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgca 297 |||||||| ||| | |||||||| ||||| ||| | ||||||||||| | |||||| ||| Sbjct: 703 tataacccaaagagatttgctgcagttattatgagaataagagaacctagaactacagca 762 Query: 298 ttgatatttgcctcaggaaaaatggtttgcac 329 |||||||| | |||||||| ||||||||||| Sbjct: 763 ctgatattttcatcaggaaagatggtttgcac 794
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 448 tgtgatgtcaaattccctatcaggcttgagggcctcgcatattctcatggtgctttctca 507 ||||||||||||||||| || |||||||| || || ||||| |||||| ||||||||||| Sbjct: 44377 tgtgatgtcaaattccccattaggcttgaaggtcttgcatactctcatagtgctttctca 44436 Query: 508 agt 510 ||| Sbjct: 44437 agt 44439 Score = 48.1 bits (24), Expect = 0.075 Identities = 27/28 (96%) Strand = Plus / Plus Query: 391 aagcttggctttcctgcaaaattcaagg 418 |||||||||||||||||||| ||||||| Sbjct: 44176 aagcttggctttcctgcaaagttcaagg 44203
>ref|XM_388603.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein (FG08427.1) partial mRNA Length = 873 Score = 69.9 bits (35), Expect = 2e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 365 ccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttca 424 |||||||||| |||||||| ||||||||||||||||| || || |||| ||||| | Sbjct: 467 ccagaaagtacgctcgtatcatccagaagcttggcttcaacgccaagttcaccgacttta 526 Query: 425 agatccagaatatagttgcctcttgtgatgtcaaattccctatcaggcttgaggg 479 |||| ||||| || |||| |||||| ||| |||| ||||||||| | |||||||| Sbjct: 527 agattcagaacattgttggctcttgcgatatcaagttccctatccgacttgaggg 581
>tpg|BK001774.1| TPA_exp: Xenopus laevis TBP-related factor 3 (TRF3) mRNA, complete cds Length = 963 Score = 65.9 bits (33), Expect = 3e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 253 tttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcctca 312 |||||||| || ||||||||||| |||||||| | ||| || ||| | ||||| ||| Sbjct: 532 tttgctgcagtaatcatgcggatcagagaacctagaacaacagcactcatattcagctct 591 Query: 313 ggaaaaatggtttgcactggagcaaaaagcgaa 345 ||||||||||| |||||||| |||||||||||| Sbjct: 592 ggaaaaatggtctgcactggtgcaaaaagcgaa 624
>gb|BC106644.1| Xenopus laevis transcription factor, mRNA (cDNA clone MGC:132200 IMAGE:5085399), complete cds Length = 1638 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||| Sbjct: 581 aatgcagagtataacccaaagcgttttgctgctgttataatgaggatacgaga 633
>gb|AY753184.1| Xenopus laevis TATA-binding protein 2 mRNA, complete cds Length = 1149 Score = 65.9 bits (33), Expect = 3e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 253 tttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttgcctca 312 |||||||| || ||||||||||| |||||||| | ||| || ||| | ||||| ||| Sbjct: 616 tttgctgcagtaatcatgcggatcagagaacctagaacaacagcactcatattcagctct 675 Query: 313 ggaaaaatggtttgcactggagcaaaaagcgaa 345 ||||||||||| |||||||| |||||||||||| Sbjct: 676 ggaaaaatggtctgcactggtgcaaaaagcgaa 708
>emb|X66033.1|XLTRAF X.laevis mRNA for transcription factor Length = 891 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||| Sbjct: 439 aatgcagagtataacccaaagcgttttgctgctgttataatgaggatacgaga 491
>dbj|D31777.1|TFLGTFTBPA Trimeresurus flavoviridis gTfTBP gene for TATA-box binding protein, complete cds Length = 17279 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 388 cagaagcttggctttcctgcaaaattcaaggacttcaagatccagaatatagttgcctct 447 |||||| | |||||||||||||||||| ||| || || || || ||||| |||| | | Sbjct: 13359 cagaagttgggctttcctgcaaaattcttggattttaaaattcaaaatatggttggcagt 13418 Query: 448 tgtgatgtcaaattccctatcaggcttgaggg 479 |||||||| |||||||||||||| |||||||| Sbjct: 13419 tgtgatgtaaaattccctatcagacttgaggg 13450
>dbj|D31776.1|TRUCTGTBP Snake (green habu) cTgTBP mRNA for TATA-box binding protein Length = 1761 Score = 63.9 bits (32), Expect = 1e-06 Identities = 131/164 (79%) Strand = Plus / Plus Query: 313 ggaaaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaag 372 ||||||||||| ||||| ||||| ||||| ||| |||| || | || || || |||||| Sbjct: 749 ggaaaaatggtgtgcacgggagctaaaagtgaagagcagtccagactggctgcgagaaag 808 Query: 373 tatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttcaagatccag 432 |||||| | | | |||||| | |||||||||||||||||| ||| || || || || Sbjct: 809 tatgctagagttgtacagaagttgggctttcctgcaaaattcttggattttaaaattcaa 868 Query: 433 aatatagttgcctcttgtgatgtcaaattccctatcaggcttga 476 ||||| |||| | ||||||||| |||||||||||||| ||||| Sbjct: 869 aatatggttggcagttgtgatgtaaaattccctatcagacttga 912
>dbj|D83135.2| Gallus gallus TBP gene, complete cds Length = 3358 Score = 61.9 bits (31), Expect = 5e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 247 aagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatattt 306 |||||||||||||| ||||| ||| |||||||||||||| ||||| || | ||||| Sbjct: 1377 aagcgttttgctgctgttattatgaggataagagaaccacgtactactgcgcttatattc 1436 Query: 307 gcctcaggaaaaatggtttgcactggagcaaaaag 341 ||| ||||||||||| ||||| ||||||||||| Sbjct: 1437 agctctggaaaaatggtgtgcacaggagcaaaaag 1471
>gb|AY376311.1| Gallus gallus proteasome subunit beta-type (PSMB1), TATA-binding protein (TBP), and programmed cell death 2 (PDCD2) genes, complete cds; and glyceronephosphate O-acyl-transferase (GNPAT) gene, partial cds Length = 39218 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattgatatttg 307 ||||||||||||| ||||| ||| |||||||||||||| ||||| || | ||||| Sbjct: 21888 agcgttttgctgctgttattatgaggataagagaaccacgtactactgcgcttatattca 21947 Query: 308 cctcaggaaaaatggtttgcactggagcaaaaag 341 ||| ||||||||||| ||||| ||||||||||| Sbjct: 21948 gctctggaaaaatggtgtgcacaggagcaaaaag 21981
>gb|AF249991.1|AF249991 Habrotrocha constricta TATA-box binding protein 1 (tbp-1) gene, partial cds Length = 426 Score = 58.0 bits (29), Expect = 8e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || ||||||||||| ||||| ||||| ||| || | ||| | Sbjct: 46 aatgctgaatataatcctaaacgttttgctgctgttattatgcgtatacgaaatccacga 105 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaaag 341 || || || || ||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 106 acaacagctttaatatttggttcaggaaaaatggtttgcacaggagctaaaag 158
>dbj|D31782.1|TRUGTGTBPB Trimeresurus gramineus gTgTBP gene for TATA-box binding protein, complete cds Length = 17366 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 388 cagaagcttggctttcctgcaaaattcaaggacttcaagatccagaatatagttgcctct 447 |||||| | |||||||||||||||||| ||| || || || || ||||| |||| | | Sbjct: 12982 cagaagttgggctttcctgcaaaattcttggattttaaaattcaaaatatggttggcagt 13041 Query: 448 tgtgatgtcaaattccctatcaggcttga 476 |||||||| |||||||||||||| ||||| Sbjct: 13042 tgtgatgtaaaattccctatcagacttga 13070
>ref|XR_020135.1| PREDICTED: Pan troglodytes hypothetical protein LOC738472 (LOC738472), mRNA Length = 1934 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 817 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 860 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1087 agttatgagccagagttatttcctggt 1113
>ref|NM_001041179.1| Encephalitozoon cuniculi GB-M1 TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1 (ECU04_1440) partial mRNA Length = 597 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 517 ccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatt 576 |||||||| ||||| || ||||||||| | ||| |||| |||||||| ||||| || Sbjct: 433 ccagagctctttccagggctgatttacagaatggtcaagcccaagattgtactcttgata 492 Query: 577 tttgtttcaggcaagattgttctgaccggagcaaaggtgagaga 620 |||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 493 tttgtttctggaaagattgttctcaccggtgccaaagtgagaga 536
>gb|BT019657.1| Homo sapiens TATA box binding protein mRNA, complete cds Length = 1011 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 565 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 608 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 835 agttatgagccagagttatttcctggt 861
>gb|BT019656.1| Synthetic construct Homo sapiens TATA box binding protein mRNA, partial cds Length = 1011 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 565 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 608 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 835 agttatgagccagagttatttcctggt 861
>gb|AY389957.1| Latimeria chalumnae TATA box binding protein (TBP)-associated factor mRNA, partial cds Length = 749 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgc 260 ||||||||||||||||| |||||||||||||| Sbjct: 347 aatgcagagtataacccaaagcgttttgctgc 378
>ref|XM_705668.1| Candida albicans SC5314 hypothetical protein (CaO19.9396), mRNA Length = 447 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 158 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 99 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 98 actacggcattaatctttgcttcggggaaaatggtt 63
>ref|XM_705667.1| Candida albicans SC5314 hypothetical protein (CaO19.9395), mRNA Length = 717 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 265 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 324 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 325 actacggcattaatctttgcttcggggaaaatggtt 360
>ref|XM_705630.1| Candida albicans SC5314 hypothetical protein (CaO19.1838), mRNA Length = 447 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 158 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 99 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 98 actacggcattaatctttgcttcggggaaaatggtt 63
>ref|XM_705629.1| Candida albicans SC5314 hypothetical protein (CaO19.1837), mRNA Length = 717 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 265 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 324 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 325 actacggcattaatctttgcttcggggaaaatggtt 360
>gb|AY168632.1| Branchiostoma floridae TATA-binding protein isoform 4 (TBP) mRNA, partial cds Length = 1195 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 502 ttctcaagttatgagccagagctatttcctggtctgatttaccg 545 ||||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 229 ttctcaagttatgagcctgagctttttcctggcctgatctaccg 272
>gb|AY168628.1| Branchiostoma floridae TATA-binding protein isoform 3 (TBP) mRNA, complete cds Length = 2025 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 502 ttctcaagttatgagccagagctatttcctggtctgatttaccg 545 ||||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1126 ttctcaagttatgagcctgagctttttcctggcctgatctaccg 1169
>gb|AY168626.1| Branchiostoma floridae TATA-binding protein isoform 2 (TBP) mRNA, complete cds Length = 2075 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 502 ttctcaagttatgagccagagctatttcctggtctgatttaccg 545 ||||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1120 ttctcaagttatgagcctgagctttttcctggcctgatctaccg 1163
>gb|AY168625.1| Branchiostoma floridae TATA-binding protein isoform 1 (TBP) mRNA, complete cds Length = 2081 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 502 ttctcaagttatgagccagagctatttcctggtctgatttaccg 545 ||||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1126 ttctcaagttatgagcctgagctttttcctggcctgatctaccg 1169
>ref|NM_003194.3| Homo sapiens TATA box binding protein (TBP), mRNA Length = 1867 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 806 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 849 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1076 agttatgagccagagttatttcctggt 1102
>emb|CR618783.1| full-length cDNA clone CS0DC029YI14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1714 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 725 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 768 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 995 agttatgagccagagttatttcctggt 1021
>emb|CR612496.1| full-length cDNA clone CS0DI033YH14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1809 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 815 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 858 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1085 agttatgagccagagttatttcctggt 1111
>emb|CR590323.1| full-length cDNA clone CS0DI037YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1819 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 810 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 853 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1080 agttatgagccagagttatttcctggt 1106
>emb|CR456776.1| Homo sapiens full open reading frame cDNA clone RZPDo834F024D for gene TBP, TATA box binding protein; complete cds, incl. stopcodon Length = 1020 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 574 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 617 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 844 agttatgagccagagttatttcctggt 870
>gb|U95550.1|U95550 Candida albicans TATA-binding protein (TBP) mRNA, complete cds Length = 910 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 299 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 358 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 359 actacggcattaatctttgcttcggggaaaatggtt 394
>gb|U95549.1|U95549 Candida albicans TATA-binding protein (TBP) gene, complete cds Length = 1059 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 ||||| || ||||| || || |||||||||||||| || ||| | || ||||| |||||| Sbjct: 478 aatgccgaatataatccaaaacgttttgctgcggtgattatgagaattagagatccaaaa 537 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtt 324 ||||| ||||| || ||||| || || ||||||||| Sbjct: 538 actacggcattaatctttgcttcggggaaaatggtt 573
>gb|BC109053.1| Homo sapiens TATA box binding protein, mRNA (cDNA clone MGC:126054 IMAGE:40032492), complete cds Length = 1393 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 764 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 807 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1034 agttatgagccagagttatttcctggt 1060
>gb|BC109054.1| Homo sapiens TATA box binding protein, mRNA (cDNA clone MGC:126055 IMAGE:40032493), complete cds Length = 1247 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 618 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 661 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 888 agttatgagccagagttatttcctggt 914
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 517 ccagagctatttcctggtctgatttaccggatgaggcagccgaagattgtcctcttaatt 576 |||||||| ||||| || ||||||||| | ||| |||| |||||||| ||||| || Sbjct: 186533 ccagagctctttccagggctgatttacagaatggtcaagcccaagattgtactcttgata 186592 Query: 577 tttgtttcaggcaagattgttctgaccggagcaaaggtgagaga 620 |||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 186593 tttgtttctggaaagattgttctcaccggtgccaaagtgagaga 186636
>gb|M34960.1|HUMTFIIDA Homo sapiens transcription factor IID mRNA, complete cds Length = 1020 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 574 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 617 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 844 agttatgagccagagttatttcctggt 870
>emb|Z22828.1|HSTFIIDAA H.sapiens transcription factor TFIID mRNA Length = 920 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 812 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 855
>emb|X54993.1|HSTFIIDX H.sapiens TFIID mRNA Length = 1710 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 660 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 703 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 930 agttatgagccagagttatttcctggt 956
>gb|BC110341.1| Homo sapiens TATA box binding protein, mRNA (cDNA clone MGC:117320 IMAGE:5761426), complete cds Length = 1887 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 812 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 855 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1082 agttatgagccagagttatttcctggt 1108
>gb|M55654.1|HUMTFIID Human TATA-binding protein mRNA, complete cds Length = 1876 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 238 tataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 815 tataatcccaagcggtttgctgcggtaatcatgaggataagaga 858 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1085 agttatgagccagagttatttcctggt 1111
>gb|AF249993.1|AF249993 Brachionus plicatilis TATA-box binding protein (tbp) gene, partial cds Length = 327 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 364 gccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttc 423 |||||||||||||| || || || |||||||| |||||||| || || |||| ||||||| Sbjct: 181 gccagaaagtatgcgcgcatcattcagaagctgggctttccggccaagttcatggacttc 240 Query: 424 aagatccagaa 434 || || ||||| Sbjct: 241 aaaattcagaa 251
>emb|Y07594.1|SCPEA2 S.cerevisiae gene encoding Pea2 protein Length = 3450 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 554 agccgaagattgtcctcttaatttttgtttcaggcaagattgttctgaccggagcaaag 612 ||||||| ||||| | ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 3324 agccgaaaattgtgttgttaatttttgtttcaggaaagattgttcttactggtgcaaag 3266
>gb|L13731.1|ONGTBP Onchocerca volvulus TATA box-binding protein gene, complete cds Length = 5072 Score = 54.0 bits (27), Expect = 0.001 Identities = 90/111 (81%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| ||||| || |||||||||||||| ||||| ||||| || | || || Sbjct: 2405 aatgcagaatataatccaaagcgttttgctgctgttataatgcgtattcgtgagccccgc 2464 Query: 289 actaccgcattgatatttgcctcaggaaaaatggtttgcactggagcaaaa 339 ||||| || ||||||||| | || |||||||||||||| || ||||||||| Sbjct: 2465 actactgctttgatattttcatcgggaaaaatggtttgtacaggagcaaaa 2515
>gb|BC116553.1| Danio rerio TATA box binding protein like 2, mRNA (cDNA clone MGC:136482 IMAGE:8108534), complete cds Length = 1423 Score = 52.0 bits (26), Expect = 0.005 Identities = 92/114 (80%) Strand = Plus / Plus Query: 241 aaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattg 300 ||||| |||||||||||||| ||||| ||| |||| | ||||||| |||||| || | Sbjct: 643 aacccaaagcgttttgctgctgttataatgaggatccgtgaaccaagaactacggctctc 702 Query: 301 atatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaatct 354 || || ||| ||||||||||| ||||||||||| || || ||| |||||||| Sbjct: 703 attttcagctctggaaaaatggtctgcactggagccaagagtgaagagcaatct 756
>gb|AC152111.1| Pichia stipitis clone JGIAHYZ-17L1, complete sequence Length = 38449 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 421 ttcaagatccagaatatagttgcctcttgtgatgtcaaattccctatcag 470 |||||||| |||||||| || | ||| |||||||||||||| |||||||| Sbjct: 36259 ttcaagattcagaatatcgtcggctcgtgtgatgtcaaatttcctatcag 36308
>ref|NM_214796.1| Danio rerio TATA box binding protein like 2 (tbpl2), mRNA gb|AY256970.1| Danio rerio TATA-binding protein 2 mRNA, complete cds Length = 1601 Score = 52.0 bits (26), Expect = 0.005 Identities = 92/114 (80%) Strand = Plus / Plus Query: 241 aaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattg 300 ||||| |||||||||||||| ||||| ||| |||| | ||||||| |||||| || | Sbjct: 816 aacccaaagcgttttgctgctgttataatgaggatccgtgaaccaagaactactgctctc 875 Query: 301 atatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaatct 354 || || ||| ||||||||||| ||||||||||| || || ||| |||||||| Sbjct: 876 attttcagctctggaaaaatggtctgcactggagccaagagtgaagagcaatct 929
>gb|AF085685.1| Lytechinus variegatus TATA-binding protein (TBP) mRNA, complete cds Length = 1101 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 502 ttctcaagttatgagccagagctatttcctggtctgatttac 543 ||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 666 ttctctagctatgaaccagagctatttccaggtctgatttac 707
>ref|XM_697638.1| PREDICTED: Danio rerio hypothetical protein LOC554647 (LOC554647), mRNA Length = 1581 Score = 52.0 bits (26), Expect = 0.005 Identities = 92/114 (80%) Strand = Plus / Plus Query: 241 aaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattg 300 ||||| |||||||||||||| ||||| ||| |||| | ||||||| |||||| || | Sbjct: 815 aacccaaagcgttttgctgctgttataatgaggatccgtgaaccaagaactacggctctc 874 Query: 301 atatttgcctcaggaaaaatggtttgcactggagcaaaaagcgaacagcaatct 354 || || ||| ||||||||||| ||||||||||| || || ||| |||||||| Sbjct: 875 attttcagctctggaaaaatggtctgcactggagccaagagtgaagagcaatct 928
>dbj|AK111369.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A03, full insert sequence Length = 587 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 113 agccggtggatctgtccaagcacccctccggcatcgtccccacgctccag 162 ||||||||||||| | ||||||||||||| ||||||||||| |||||| Sbjct: 240 agccggtggatctcgtcgagcacccctccgggatcgtccccaccctccag 289
>emb|BX824252.1|CNS0A5S4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1283 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 244 cccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactaccgcattga 301 |||||||||||||||||||| || ||| |||| |||||||| || || || ||||||| Sbjct: 405 cccaagcgttttgctgcggtgataatgaggatgagagaaccgaagacgacagcattga 462
>gb|AY168630.1| Eptatretus stoutii TATA-binding protein (TBP) mRNA, complete cds Length = 2078 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 226 cgcaatgcagagtataaccccaagcgttttgctgcggttat 266 |||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 716 cgcaatgctgagtacaaccccaagcgatttgctgcagttat 756
>ref|NM_001075742.1| Bos taurus TATA-box binding protein (LOC516578), mRNA gb|BC113308.1| Bos taurus TATA-box binding protein, mRNA (cDNA clone MGC:138100 IMAGE:8089033), complete cds Length = 1951 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagaga 281 ||||| || ||||| ||||||||||||||||| || |||||| | |||||||| Sbjct: 883 aatgctgaatataatcccaagcgttttgctgctgtaatcatgagaataagaga 935 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1162 agttatgagccagagttatttcctggt 1188
>gb|AY945932.1| Penicillium marneffei TATA-binding protein (TBP) gene, complete cds Length = 1372 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Plus Query: 412 ttcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccc 464 |||| |||||||||||||||||| || || | ||| |||||| |||||||||| Sbjct: 921 ttcacggacttcaagatccagaacatcgtcggctcgtgtgatatcaaattccc 973
>gb|AY945931.1| Penicillium marneffei TATA-binding protein (TBP) mRNA, complete cds Length = 1682 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Plus Query: 412 ttcaaggacttcaagatccagaatatagttgcctcttgtgatgtcaaattccc 464 |||| |||||||||||||||||| || || | ||| |||||| |||||||||| Sbjct: 891 ttcacggacttcaagatccagaacatcgtcggctcgtgtgatatcaaattccc 943
>ref|XM_638541.1| Dictyostelium discoideum AX4 TATA-binding protein (tbpA) mRNA, complete cds Length = 618 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Plus Query: 316 aaaatggtttgcactggagcaaaa 339 |||||||||||||||||||||||| Sbjct: 238 aaaatggtttgcactggagcaaaa 261 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Plus Query: 424 aagatccagaatatagttgcctcttgtgatgtcaaattccctatca 469 ||||| || ||||| |||| |||||||||||||||||||| |||| Sbjct: 346 aagattcaaaatatcgttggatcttgtgatgtcaaattcccaatca 391
>ref|XM_866803.1| PREDICTED: Bos taurus similar to TATA box binding protein like 2 (LOC615096), mRNA Length = 1482 Score = 48.1 bits (24), Expect = 0.075 Identities = 75/92 (81%) Strand = Plus / Plus Query: 316 aaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaagtat 375 |||||||| ||||| ||||| ||||||||| |||| ||| || ||||| || ||||| Sbjct: 1117 aaaatggtctgcacaggagccaaaagcgaagagcagtctcgacttgcagcgaggaagtac 1176 Query: 376 gctcgtataatccagaagcttggctttcctgc 407 || ||| | | |||||||||||||||||||| Sbjct: 1177 gcccgtgtggtgcagaagcttggctttcctgc 1208
>gb|AC114258.3| Dictyostelium discoideum chromosome 2 map complement(427476-387492) strain AX4, complete sequence Length = 39984 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Minus Query: 316 aaaatggtttgcactggagcaaaa 339 |||||||||||||||||||||||| Sbjct: 7774 aaaatggtttgcactggagcaaaa 7751 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Minus Query: 424 aagatccagaatatagttgcctcttgtgatgtcaaattccctatca 469 ||||| || ||||| |||| |||||||||||||||||||| |||| Sbjct: 7666 aagattcaaaatatcgttggatcttgtgatgtcaaattcccaatca 7621
>emb|CR731077.1|CNS0GR1M Tetraodon nigroviridis full-length cDNA Length = 1192 Score = 48.1 bits (24), Expect = 0.075 Identities = 30/32 (93%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgc 260 |||||||||||||| || |||||||||||||| Sbjct: 623 aatgcagagtataatccaaagcgttttgctgc 654 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 cagaagcttggctttcctgcaaa 410 ||||||||||||||||||||||| Sbjct: 782 cagaagcttggctttcctgcaaa 804
>emb|AJ133692.1|ECR133692 Euplotes crassus TBP gene for eukaryotic transcription factor Length = 1491 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 408 aaaattcaaggacttcaagatccagaatatagttgcctct 447 |||||||| ||||| ||| |||||||||||||||||||| Sbjct: 906 aaaattcaccgactttaaggtccagaatatagttgcctct 945
>dbj|AB051823.1| Ephydatia fluviatilis TBP mRNA for TATA-box binding protein, complete cds Length = 984 Score = 48.1 bits (24), Expect = 0.075 Identities = 66/80 (82%) Strand = Plus / Plus Query: 193 aaattggacctcaaagctatagctctccaggcacgcaatgcagagtataaccccaagcgt 252 ||||||||||||||| ||||| || || ||| | || |||||||| ||||| ||||| Sbjct: 388 aaattggacctcaaaaagatagcccttcatgcaagaaacgcagagtacaaccctaagcga 447 Query: 253 tttgctgcggttatcatgcg 272 ||||||||||| || ||||| Sbjct: 448 tttgctgcggtcattatgcg 467 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 ggaaaaatggtttgcactggagcaaaaag 341 ||||||||||| ||||| ||||||||||| Sbjct: 508 ggaaaaatggtgtgcacaggagcaaaaag 536
>gb|M64861.1|DDITFIID D.discoideum TFIID mRNA, complete cds Length = 1265 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Plus Query: 316 aaaatggtttgcactggagcaaaa 339 |||||||||||||||||||||||| Sbjct: 522 aaaatggtttgcactggagcaaaa 545 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Plus Query: 424 aagatccagaatatagttgcctcttgtgatgtcaaattccctatca 469 ||||| || ||||| |||| |||||||||||||||||||| |||| Sbjct: 630 aagattcaaaatatcgttggatcttgtgatgtcaaattcccaatca 675
>ref|XM_001213720.1| Aspergillus terreus NIH2624 TATA-box binding protein (ATEG_04542) mRNA, complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.30 Identities = 68/83 (81%) Strand = Plus / Plus Query: 532 ggtctgatttaccggatgaggcagccgaagattgtcctcttaatttttgtttcaggcaag 591 |||||||||||||| |||| | |||| |||||||| ||||| || || || |||||| Sbjct: 643 ggtctgatttaccgcatgatgaagcccaagattgtgctcttgatcttcgtcagtggcaag 702 Query: 592 attgttctgaccggagcaaaggt 614 ||||| ||||| || |||||||| Sbjct: 703 attgtcctgactggtgcaaaggt 725 Score = 44.1 bits (22), Expect = 1.2 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 ccagaaagtatgctcgtataatccagaagcttggctttcctgcaaaattcaaggacttca 424 ||||||| || || ||||| ||||||||||| ||||| ||| || |||| ||| |||| Sbjct: 476 ccagaaaatacgcgcgtatcatccagaagctcggcttcaatgccaagttcacggatttca 535 Query: 425 agatccagaa 434 |||||||||| Sbjct: 536 agatccagaa 545
>ref|XM_001085250.1| PREDICTED: Macaca mulatta similar to TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit), transcript variant 2 (LOC696258), mRNA Length = 1682 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 886 agttatgagccagagttatttcctggt 912
>ref|XM_001085368.1| PREDICTED: Macaca mulatta similar to TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit), transcript variant 3 (LOC696258), mRNA Length = 1844 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1048 agttatgagccagagttatttcctggt 1074
>ref|XM_583731.1| PREDICTED: Bos taurus similar to TATA-box binding protein (TATA-box factor) (TATA binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit), transcript variant 1 (LOC538929), mRNA Length = 912 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 736 agttatgagccagagttatttcctggt 762
>ref|XM_501249.1| Yarrowia lipolytica CLIB122, YALI0B23056g predicted mRNA Length = 684 Score = 46.1 bits (23), Expect = 0.30 Identities = 44/51 (86%) Strand = Plus / Plus Query: 138 ctccggcatcgtccccacgctccagaatattgtgtcgacggtcaacctgga 188 |||||| ||||||||||| || ||||| ||||| |||| ||||||||||| Sbjct: 141 ctccggtatcgtccccacactacagaacattgttgcgaccgtcaacctgga 191
>ref|NM_001032673.1| Takifugu rubripes TBP-related factor 3 (TRF3), mRNA gb|AY457925.1| Takifugu rubripes TBP-related factor 3 (TRF3) mRNA, complete cds Length = 1119 Score = 46.1 bits (23), Expect = 0.30 Identities = 41/47 (87%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggat 275 ||||||||||| ||||| |||||||| ||||| || |||||| |||| Sbjct: 531 aatgcagagtacaacccaaagcgtttcgctgcagtcatcatgaggat 577
>dbj|AB178959.1| Macaca fascicularis testis cDNA clone: QtsA-10091, similar to human TATA box binding protein (TBP), mRNA, RefSeq: NM_003194.2 Length = 1852 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1072 agttatgagccagagttatttcctggt 1098
>dbj|AB168365.1| Macaca fascicularis testis cDNA clone: QtsA-11515, similar to human TATA box binding protein (TBP), mRNA, RefSeq: NM_003194.2 Length = 1875 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 1070 agttatgagccagagttatttcctggt 1096
>emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21 on chromosome 6q27 Contains a 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) pseudogene, the PDCD2 gene for programmed cell death 2 (RP8 homolog), the TBP gene for TATA box binding protein, the PSMB1 gene for proteasome subunit HC5 and two CpG islands, complete sequence Length = 113820 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 agttatgagccagagctatttcctggt 534 ||||||||||||||| ||||||||||| Sbjct: 77534 agttatgagccagagttatttcctggt 77508 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 248 agcgttttgctgcggttatcatgcggataagaga 281 |||| ||||||||||| |||||| |||||||||| Sbjct: 82026 agcggtttgctgcggtaatcatgaggataagaga 81993
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.30 Identities = 44/51 (86%) Strand = Plus / Plus Query: 138 ctccggcatcgtccccacgctccagaatattgtgtcgacggtcaacctgga 188 |||||| ||||||||||| || ||||| ||||| |||| ||||||||||| Sbjct: 3019307 ctccggtatcgtccccacactacagaacattgttgcgaccgtcaacctgga 3019357
>dbj|AK231510.1| Sus scrofa mRNA, clone:ITT010083G04, expressed in intestine Length = 1270 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 428 cctcaggaaaaattatttgcactggagcaa 457
>ref|XM_001169892.1| PREDICTED: Pan troglodytes TBP-like 1, transcript variant 2 (TBPL1), mRNA Length = 840 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 492 cctcaggaaaaattatttgcactggagcaa 521
>ref|XM_001169874.1| PREDICTED: Pan troglodytes TBP-like 1, transcript variant 1 (TBPL1), mRNA Length = 887 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 492 cctcaggaaaaattatttgcactggagcaa 521
>ref|XM_518750.2| PREDICTED: Pan troglodytes TBP-like 1, transcript variant 3 (TBPL1), mRNA Length = 1236 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 236 cctcaggaaaaattatttgcactggagcaa 265
>ref|XM_001056405.1| PREDICTED: Rattus norvegicus TATA box binding protein-like 1 (predicted) (Tbpl1_predicted), mRNA Length = 1092 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 614 cctcaggaaaaattatttgcactggagcaa 643
>ref|XM_001069243.1| PREDICTED: Rattus norvegicus similar to TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein) (LOC689030), mRNA Length = 3918 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 614 cctcaggaaaaattatttgcactggagcaa 643
>ref|XR_012501.1| PREDICTED: Macaca mulatta similar to TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein) (LOC707475), mRNA Length = 5086 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 492 cctcaggaaaaattatttgcactggagcaa 521
>ref|XM_364033.1| Magnaporthe grisea 70-15 hypothetical protein (MG08878.4) partial mRNA Length = 768 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 235 gagtataaccccaagcgttttgctgcggttatcatgcg 272 ||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 322 gagtacaaccctaagcgtttcgctgctgttatcatgcg 359
>ref|NM_004865.2| Homo sapiens TBP-like 1 (TBPL1), mRNA Length = 1340 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 492 cctcaggaaaaattatttgcactggagcaa 521
>ref|XM_590017.2| PREDICTED: Bos taurus similar to REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (LOC512493), mRNA Length = 4962 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1101 gtttttccatccctttgttgtt 1122 |||||||||||||||||||||| Sbjct: 3628 gtttttccatccctttgttgtt 3607
>gb|BC017559.2| Homo sapiens TBP-like 1, mRNA (cDNA clone MGC:9620 IMAGE:3911352), complete cds Length = 1245 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 403 cctcaggaaaaattatttgcactggagcaa 432
>gb|BC000381.2| Homo sapiens TBP-like 1, mRNA (cDNA clone MGC:8389 IMAGE:2820491), complete cds Length = 1311 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 460 cctcaggaaaaattatttgcactggagcaa 489
>ref|XM_454405.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10076g predicted mRNA Length = 702 Score = 44.1 bits (22), Expect = 1.2 Identities = 61/74 (82%) Strand = Plus / Plus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| || || || ||||||||||| || || || ||||| || |||||||| || Sbjct: 250 aatgcagaatacaatccaaagcgttttgcggctgtgattatgcgtatcagagaaccgaag 309 Query: 289 actaccgcattgat 302 ||||| |||||||| Sbjct: 310 actactgcattgat 323
>gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181903 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 49123 cctcaggaaaaattatttgcactggagcaa 49152
>gb|AY179593.1| Schizophyllum fasciatum mitochondrial intermediate peptidase (mip) gene, partial cds; nuclear gene for mitochondrial product Length = 631 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 11 cacgcccacgccaccgcctcctcctccctc 40 |||||| || |||||||||||||||||||| Sbjct: 182 cacgccgactccaccgcctcctcctccctc 211
>ref|XM_861305.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 4 (LOC609509), mRNA Length = 1243 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 444 cctcaggaaaaattatttgcactggagcaa 473
>ref|XM_861295.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 3 (LOC609509), mRNA Length = 1296 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 444 cctcaggaaaaattatttgcactggagcaa 473
>ref|XM_847715.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 1 (LOC609509), mRNA Length = 1266 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 414 cctcaggaaaaattatttgcactggagcaa 443
>ref|XM_861268.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 2 (LOC609509), mRNA Length = 1172 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 320 cctcaggaaaaattatttgcactggagcaa 349
>ref|XM_848617.1| PREDICTED: Canis familiaris similar to TATA box binding protein like 2 (LOC611011), mRNA Length = 1035 Score = 44.1 bits (22), Expect = 1.2 Identities = 55/66 (83%) Strand = Plus / Plus Query: 316 aaaatggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaagtat 375 |||||||| ||||| ||||| ||||| ||| |||| ||| |||||||| || |||||| Sbjct: 670 aaaatggtctgcacaggagccaaaagtgaagagcagtctcgactcgcagcgaggaagtat 729 Query: 376 gctcgt 381 |||||| Sbjct: 730 gctcgt 735
>gb|BC033926.1| Mus musculus TATA box binding protein-like 1, mRNA (cDNA clone MGC:41136 IMAGE:1382180), complete cds Length = 1338 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 401 cctcaggaaaaattatttgcactggagcaa 430
>ref|XM_854613.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 9 (LOC476209), mRNA Length = 1282 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 484 cctcaggaaaaattatttgcactggagcaa 513
>ref|XM_854581.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 8 (LOC476209), mRNA Length = 802 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 484 cctcaggaaaaattatttgcactggagcaa 513
>ref|XM_854553.1| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 7 (LOC476209), mRNA Length = 1223 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 391 cctcaggaaaaattatttgcactggagcaa 420
>ref|XM_533413.2| PREDICTED: Canis familiaris similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), transcript variant 6 (LOC476209), mRNA Length = 1319 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 487 cctcaggaaaaattatttgcactggagcaa 516
>ref|XM_753448.1| Ustilago maydis 521 transcription initiation factor TFIID-1 (UM02394.1) partial mRNA Length = 570 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 235 gagtataaccccaagcgttttgctgcggttatcatgcg 272 ||||||||||| ||||||||||| || || |||||||| Sbjct: 124 gagtataaccctaagcgttttgccgcagtcatcatgcg 161
>dbj|AB168611.1| Macaca fascicularis testis cDNA clone: QtsA-13476, similar to human TBP-like 1 (TBPL1), mRNA, RefSeq: NM_004865.2 Length = 2039 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 429 cctcaggaaaaattatttgcactggagcaa 458
>ref|NM_001076290.1| Bos taurus similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein) (MGC134257), mRNA gb|BC109666.1| Bos taurus similar to TATA box binding protein-like protein 1 (TBP-like protein 1) (TATA box binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein), mRNA (cDNA clone MGC:134257 IMAGE:8053628), complete cds Length = 1195 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 359 cctcaggaaaaattatttgcactggagcaa 388
>dbj|AK005604.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700001K07 product:TATA box binding protein-like protein, full insert sequence Length = 1190 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 380 cctcaggaaaaattatttgcactggagcaa 409
>dbj|AK028621.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732418P20 product:TATA box binding protein-like protein, full insert sequence Length = 2821 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 1972 cctcaggaaaaattatttgcactggagcaa 1943
>dbj|AK049975.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630034P06 product:TATA box binding protein-like protein, full insert sequence Length = 2123 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 432 cctcaggaaaaattatttgcactggagcaa 461
>ref|NM_011603.2| Mus musculus TATA box binding protein-like 1 (Tbpl1), mRNA dbj|AK078547.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820446N06 product:TATA box binding protein-like protein, full insert sequence Length = 2809 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 492 cctcaggaaaaattatttgcactggagcaa 521
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcccacgccaccgcctcctcc 34 |||||||||||||||||||||| Sbjct: 8145409 cgcccacgccaccgcctcctcc 8145430
>emb|AL035699.4|HS73H22 Human DNA sequence from clone RP1-73H22 on chromosome 6q23 Contains the TBPL1 gene for TBP-like 1, the 3' part of the SLC2A12 gene for solute carrier family 2 (facilitated glucose transporter) member 12 and one CpG island, complete sequence Length = 104824 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 23510 cctcaggaaaaattatttgcactggagcaa 23481
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 44.1 bits (22), Expect = 1.2 Identities = 61/74 (82%) Strand = Plus / Minus Query: 229 aatgcagagtataaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaa 288 |||||||| || || || ||||||||||| || || || ||||| || |||||||| || Sbjct: 893723 aatgcagaatacaatccaaagcgttttgcggctgtgattatgcgtatcagagaaccgaag 893664 Query: 289 actaccgcattgat 302 ||||| |||||||| Sbjct: 893663 actactgcattgat 893650
>emb|CR860011.1| Pongo pygmaeus mRNA; cDNA DKFZp459I1225 (from clone DKFZp459I1225) Length = 2981 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 427 cctcaggaaaaattatttgcactggagcaa 456
>emb|CR596561.1| full-length cDNA clone CS0DN003YJ11 of Adult brain of Homo sapiens (human) Length = 1164 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 367 cctcaggaaaaattatttgcactggagcaa 396
>emb|CR593032.1| full-length cDNA clone CS0DC027YO06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1208 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 411 cctcaggaaaaattatttgcactggagcaa 440
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcccacgccaccgcctcctcc 34 |||||||||||||||||||||| Sbjct: 28432 cgcccacgccaccgcctcctcc 28453
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcccacgccaccgcctcctcc 34 |||||||||||||||||||||| Sbjct: 79181 cgcccacgccaccgcctcctcc 79202
>gb|AC073050.5| Homo sapiens BAC clone RP11-70E4 from 2, complete sequence Length = 135586 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 atatttgcctcaggaaaaatgg 322 |||||||||||||||||||||| Sbjct: 96182 atatttgcctcaggaaaaatgg 96161
>emb|AL111132.1|CNS01939 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 247 aagcgttttgctgcggttatcatgcg 272 |||||||| ||||||||||||||||| Sbjct: 57 aagcgtttcgctgcggttatcatgcg 82
>emb|AL113773.1|CNS01B4L Botrytis cinerea strain T4 cDNA library Length = 720 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 247 aagcgttttgctgcggttatcatgcg 272 |||||||| ||||||||||||||||| Sbjct: 57 aagcgtttcgctgcggttatcatgcg 82
>gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete sequence Length = 158302 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 971 atttctaaagccttttctttct 992 |||||||||||||||||||||| Sbjct: 44544 atttctaaagccttttctttct 44565
>emb|Z96662.1|HS6QT056 H.sapiens telomeric DNA sequence, clone 6QTEL056, read 6QTELOO056.seq Length = 413 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 248 agcgttttgctgcggttatcatgcggataagaga 281 |||| ||||||||||| |||||| |||||||||| Sbjct: 121 agcggtttgctgcggtaatcatgaggataagaga 154
>gb|AC153369.4| Mus musculus 10 BAC RP23-103E4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197003 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 177463 cctcaggaaaaattatttgcactggagcaa 177492
>gb|AF136570.1|AF136570 Homo sapiens TATA box binding protein-related factor 2 mRNA, complete cds Length = 1287 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 439 cctcaggaaaaattatttgcactggagcaa 468
>gb|AF130312.1|AF130312 Homo sapiens STUD protein mRNA, complete cds Length = 1283 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 435 cctcaggaaaaattatttgcactggagcaa 464
>gb|AY609437.1| Sus scrofa clone Clu_115249.scr.msk.p1.Contig1, mRNA sequence Length = 1552 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 442 cctcaggaaaaattatttgcactggagcaa 471
>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence Length = 208779 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 cagaagcttggctttcctgcaa 409 |||||||||||||||||||||| Sbjct: 154977 cagaagcttggctttcctgcaa 154998
>gb|U14411.1|PCU14411 Pneumocystis carinii variant TATA binding protein gene, complete cds Length = 1051 Score = 44.1 bits (22), Expect = 1.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 418 gacttcaagatccagaatatagttgcctcttgtgatgtcaaattccctat 467 ||||| ||||| |||||||| |||| || |||||||||||||| ||||| Sbjct: 662 gactttaagattcagaatattgttggttcatgtgatgtcaaatttcctat 711
>dbj|AB017697.1| Mus musculus TLP21 mRNA for 21-kDa TBP-like protein, complete cds Length = 1273 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 457 cctcaggaaaaattatttgcactggagcaa 486
>dbj|AB020881.1| Homo sapiens mRNA for TBP-like protein, complete cds Length = 1227 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 cctcaggaaaaatggtttgcactggagcaa 337 ||||||||||||| ||||||||||||||| Sbjct: 407 cctcaggaaaaattatttgcactggagcaa 436
>ref|XM_423253.2| PREDICTED: Gallus gallus similar to Methylosome subunit pICln (Chloride conductance regulatory protein ICln) (I(Cln)) (Chloride channel, nucleotide sensitive 1A) (LOC425500), mRNA Length = 1392 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gccaccgcctcctcctccctc 40 ||||||||||||||||||||| Sbjct: 39 gccaccgcctcctcctccctc 19
>ref|XM_001088740.1| PREDICTED: Macaca mulatta similar to TATA box binding protein like 2 (LOC697371), mRNA Length = 1363 Score = 42.1 bits (21), Expect = 4.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 319 atggtttgcactggagcaaaaagcgaacagcaatctaagctcgcagccagaaagtatgct 378 ||||||||||| ||||| ||||| ||| |||| ||| || ||||| ||||| |||||| Sbjct: 827 atggtttgcacgggagccaaaagtgaagagcagtctcgacttgcagcgagaaaatatgct 886 Query: 379 cgtataatccagaagcttggctttcctgc 407 ||| | | ||||||||||| || ||||| Sbjct: 887 cgtgtggtgcagaagcttgggttccctgc 915
>gb|CP000376.1| Silicibacter sp. TM1040 mega plasmid, complete sequence Length = 821788 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 aattcaaggacttcaagatcc 430 ||||||||||||||||||||| Sbjct: 105828 aattcaaggacttcaagatcc 105808
>ref|NM_004091.2| Homo sapiens E2F transcription factor 2 (E2F2), mRNA Length = 5273 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 tgaagcactctgtggaagtcg 941 ||||||||||||||||||||| Sbjct: 4051 tgaagcactctgtggaagtcg 4031
>ref|XM_876118.1| PREDICTED: Bos taurus similar to TATA-box binding protein (TATA-box factor) (TATA binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit), transcript variant 2 (LOC538929), mRNA Length = 753 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 510 ttatgagccagagctatttcctggt 534 ||||||||||||| ||||||||||| Sbjct: 579 ttatgagccagagttatttcctggt 603
>gb|BC053676.1| Homo sapiens E2F transcription factor 2, mRNA (cDNA clone MGC:61488 IMAGE:6170186), complete cds Length = 4859 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 tgaagcactctgtggaagtcg 941 ||||||||||||||||||||| Sbjct: 3635 tgaagcactctgtggaagtcg 3615
>gb|BC007609.1| Homo sapiens E2F transcription factor 2, mRNA (cDNA clone IMAGE:3351479), complete cds Length = 2917 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 tgaagcactctgtggaagtcg 941 ||||||||||||||||||||| Sbjct: 1733 tgaagcactctgtggaagtcg 1713
>dbj|AK092799.1| Homo sapiens cDNA FLJ35480 fis, clone SMINT2007932 Length = 2258 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 tgaagcactctgtggaagtcg 941 ||||||||||||||||||||| Sbjct: 1116 tgaagcactctgtggaagtcg 1096
>emb|AL021154.1|HS150O5 Human DNA sequence from clone RP1-150O5 on chromosome 1p36.13-36.22 Contains the 5' end of the gene for up-regulated in liver cancer 1 (UPLC1) (FLJ34972), the E2F2 gene for E2F transcription factor 2, the ID3 gene for inhibitor of DNA binding 3 dominant negative helix-loop-helix protein, a novel gene and two CpG islands, complete sequence Length = 129722 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 tgaagcactctgtggaagtcg 941 ||||||||||||||||||||| Sbjct: 57336 tgaagcactctgtggaagtcg 57356
>emb|BX664015.1| Serratia marcescens plasmid R478 Length = 274762 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1061 agggcttttatgtcaatccaa 1081 ||||||||||||||||||||| Sbjct: 42796 agggcttttatgtcaatccaa 42776
>gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448G15, complete sequence Length = 199450 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 ccatcagattaggagcacctggtgt 843 |||||||||| |||||||||||||| Sbjct: 134939 ccatcagattgggagcacctggtgt 134963
>dbj|AP006362.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34B12, TM0147a, complete sequence Length = 36143 Score = 42.1 bits (21), Expect = 4.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 430 cagaatatagttgcctcttgtgatgtcaaattccctatcaggcttgagggcctcgcatat 489 ||||| || |||| ||| ||||||||||| ||||| || |||| ||||| || |||||| Sbjct: 22885 cagaacattgttggctcatgtgatgtcaagttcccaatacggctggagggtctagcatat 22944 Query: 490 tctcatggt 498 || |||||| Sbjct: 22945 tcccatggt 22953
>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete sequence Length = 153467 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 ttctaaagccttttctttctc 993 ||||||||||||||||||||| Sbjct: 2207 ttctaaagccttttctttctc 2187
>gb|AC154349.1| Mus musculus BAC clone RP23-222O19 from 17, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1133 atgtcatttctgtaagaacat 1153 ||||||||||||||||||||| Sbjct: 70822 atgtcatttctgtaagaacat 70802
>emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chromosome 4, complete sequence Length = 160873 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 968 tggatttctaaagccttttct 988 ||||||||||||||||||||| Sbjct: 155631 tggatttctaaagccttttct 155611
>dbj|AB051821.1| Oryzias latipes TBP mRNA for TATA-box binding protein, partial cds Length = 1262 Score = 42.1 bits (21), Expect = 4.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 241 aaccccaagcgttttgctgcggttatcatgcggataagagaaccaaaaactac 293 ||||| |||||||||||||| || || ||| | ||| ||||||||| |||||| Sbjct: 521 aacccaaagcgttttgctgcagtcattatgagaatacgagaaccaagaactac 573 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 213,338,414 Number of extensions: 11351938 Number of successful extensions: 225073 Number of sequences better than 10.0: 220 Number of HSP's gapped: 225044 Number of HSP's successfully gapped: 348 Length of query: 1219 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1196 Effective length of database: 18,503,978,556 Effective search space: 22130758352976 Effective search space used: 22130758352976 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)