ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf129k23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072066.1| Oryza sativa (japonica cultivar-group) Os11g0105800 (Os11g0105800) mRNA, partial cds Length = 1115 Score = 416 bits (210), Expect = e-113 Identities = 561/678 (82%) Strand = Plus / Plus Query: 122 ggagagcccgcttctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggc 181 |||||||||||| ||||||||||||||||| ||||||||||||||| | |||| | || Sbjct: 96 ggagagcccgctgctccgggacgccggcgccgccgtgctcaccggagccaccgccctcgc 155 Query: 182 ggtgctccgcttctgggaggaggtcggcaaccgcgccctcctggaccaaaaactctgcag 241 ||||| || |||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 156 cgtgcttcgtttctgggaagaggtcggcaaccgcgccctcttggaccagaaactctgcag 215 Query: 242 gaagctggtgcacatcagtgtcgggctggtatatttccttatgtggcctctgttcagtgc 301 ||| || ||||| || | ||| || | ||||| ||||||||||||||| |||||||||| Sbjct: 216 gaaactcgtgcatattactgttggcttagtatacttccttatgtggcctttgttcagtgc 275 Query: 302 agatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgtaaaggt 361 |||||||||||||||||||||||||||| | | ||||||||| | |||||| ||||||| Sbjct: 276 ggatgatgtctatgctccatttcttgcttcccttgtcattgcattcaacatcataaaggt 335 Query: 362 gactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgacaagaaa 421 || |||||||| || ||| | || ||||||||||||||| ||||||| ||||| || || Sbjct: 336 taccttgattggacttggtattgtcaaagatgatggcgtcattaactccatgaccaggaa 395 Query: 422 tggagactatagagagcttctcaaaggcccgctctattacgcgtgtactataactctcac 481 |||||| ||||||||||| ||||| || || || ||||| ||| ||||||| ||| | Sbjct: 396 cggagaccgcagagagcttcttaaaggtccactgtactacgcttgtgctataacactcgc 455 Query: 482 taccgtaatcttttggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgc 541 ||| ||||| || |||||||| ||||||||||| ||||| ||||||||||| |||| || Sbjct: 456 tactgtaattttctggaggacatctcccatttcaatcgcagtgatttgcaacttgtgtgc 515 Query: 542 aggggacggtgtggccgacatagccgggaggcgatacgggcatgtgaagctccctcacaa 601 || || ||||| || |||||||| || ||||||| ||| ||||| ||||| ||| |||| Sbjct: 516 cggagatggtgtagctgacatagctggaaggcgattcggacatgtaaagcttccttacaa 575 Query: 602 ccctgacaaatcctacgccggaagcatcgcaatgttctttgccggattcatcgcatcgat 661 |||||| || || || || ||| ||| ||||||||||| || || ||| | ||||| || Sbjct: 576 ccctgataagtcttatgctggatccattgcaatgttcttagctggtttccttgcatcaat 635 Query: 662 cctgttcatgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgc 721 ||||| |||||||||||||||||| || || || || ||| ||||||||| |||||| Sbjct: 636 cctgtacatgtgctacttccacctctttggatttgtcgaggagagctggagcatggtgat 695 Query: 722 tgccttcggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcg 781 ||||| || | || |||||||| || |||||||| ||||||||||| ||||||| || Sbjct: 696 cgcctttggtgtgacatcgcttgctgctgcaattgtggagtcactccctatcagcacacg 755 Query: 782 cttggacgataacctgac 799 | ||||||| || ||||| Sbjct: 756 cctggacgacaatctgac 773
>dbj|AK110748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-G04, full insert sequence Length = 1218 Score = 416 bits (210), Expect = e-113 Identities = 561/678 (82%) Strand = Plus / Plus Query: 122 ggagagcccgcttctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggc 181 |||||||||||| ||||||||||||||||| ||||||||||||||| | |||| | || Sbjct: 199 ggagagcccgctgctccgggacgccggcgccgccgtgctcaccggagccaccgccctcgc 258 Query: 182 ggtgctccgcttctgggaggaggtcggcaaccgcgccctcctggaccaaaaactctgcag 241 ||||| || |||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 259 cgtgcttcgtttctgggaagaggtcggcaaccgcgccctcttggaccagaaactctgcag 318 Query: 242 gaagctggtgcacatcagtgtcgggctggtatatttccttatgtggcctctgttcagtgc 301 ||| || ||||| || | ||| || | ||||| ||||||||||||||| |||||||||| Sbjct: 319 gaaactcgtgcatattactgttggcttagtatacttccttatgtggcctttgttcagtgc 378 Query: 302 agatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgtaaaggt 361 |||||||||||||||||||||||||||| | | ||||||||| | |||||| ||||||| Sbjct: 379 ggatgatgtctatgctccatttcttgcttcccttgtcattgcattcaacatcataaaggt 438 Query: 362 gactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgacaagaaa 421 || |||||||| || ||| | || ||||||||||||||| ||||||| ||||| || || Sbjct: 439 taccttgattggacttggtattgtcaaagatgatggcgtcattaactccatgaccaggaa 498 Query: 422 tggagactatagagagcttctcaaaggcccgctctattacgcgtgtactataactctcac 481 |||||| ||||||||||| ||||| || || || ||||| ||| ||||||| ||| | Sbjct: 499 cggagaccgcagagagcttcttaaaggtccactgtactacgcttgtgctataacactcgc 558 Query: 482 taccgtaatcttttggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgc 541 ||| ||||| || |||||||| ||||||||||| ||||| ||||||||||| |||| || Sbjct: 559 tactgtaattttctggaggacatctcccatttcaatcgcagtgatttgcaacttgtgtgc 618 Query: 542 aggggacggtgtggccgacatagccgggaggcgatacgggcatgtgaagctccctcacaa 601 || || ||||| || |||||||| || ||||||| ||| ||||| ||||| ||| |||| Sbjct: 619 cggagatggtgtagctgacatagctggaaggcgattcggacatgtaaagcttccttacaa 678 Query: 602 ccctgacaaatcctacgccggaagcatcgcaatgttctttgccggattcatcgcatcgat 661 |||||| || || || || ||| ||| ||||||||||| || || ||| | ||||| || Sbjct: 679 ccctgataagtcttatgctggatccattgcaatgttcttagctggtttccttgcatcaat 738 Query: 662 cctgttcatgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgc 721 ||||| |||||||||||||||||| || || || || ||| ||||||||| |||||| Sbjct: 739 cctgtacatgtgctacttccacctctttggatttgtcgaggagagctggagcatggtgat 798 Query: 722 tgccttcggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcg 781 ||||| || | || |||||||| || |||||||| ||||||||||| ||||||| || Sbjct: 799 cgcctttggtgtgacatcgcttgctgctgcaattgtggagtcactccctatcagcacacg 858 Query: 782 cttggacgataacctgac 799 | ||||||| || ||||| Sbjct: 859 cctggacgacaatctgac 876
>ref|NM_001072464.1| Oryza sativa (japonica cultivar-group) Os12g0105500 (Os12g0105500) mRNA, partial cds Length = 1059 Score = 414 bits (209), Expect = e-112 Identities = 551/665 (82%) Strand = Plus / Plus Query: 135 ctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggcggtgctccgcttc 194 ||||||||||||||||| ||||||||||||||| | ||| | || ||||| |||||| Sbjct: 45 ctccgggacgccggcgccgccgtgctcaccggagccaccgcgctcgccgtgcttcgcttc 104 Query: 195 tgggaggaggtcggcaaccgcgccctcctggaccaaaaactctgcaggaagctggtgcac 254 ||||| ||||||||||||||||||||| ||||||| ||||| |||||||| || |||||| Sbjct: 105 tgggaagaggtcggcaaccgcgccctcttggaccagaaactttgcaggaaactcgtgcac 164 Query: 255 atcagtgtcgggctggtatatttccttatgtggcctctgttcagtgcagatgatgtctat 314 || | ||| || | ||||| ||||| ||||||||| |||||||||| |||||||||||| Sbjct: 165 attactgttggcttagtatacttcctcatgtggcctttgttcagtgcggatgatgtctat 224 Query: 315 gctccatttcttgcttgcatcgtcattgcactaaacatcgtaaaggtgactttgattggc 374 |||||||||||||||| ||| ||||||||| | |||||| ||||||| || |||||||| Sbjct: 225 gctccatttcttgcttccattgtcattgcattcaacatcataaaggttaccttgattgga 284 Query: 375 ctcggtgtagttaaagatgatggcgtcgttaactcaatgacaagaaatggagactataga 434 || ||| | || ||||||||||| ||| ||||||| ||||| || || |||||| |||| Sbjct: 285 cttggtattgtcaaagatgatggtgtcattaactccatgaccaggaacggagaccctaga 344 Query: 435 gagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatcttt 494 |||||||| ||||| || || || ||||| ||| |||| |||||| |||| || || || Sbjct: 345 gagcttcttaaaggaccactgtactacgcttgtgctatgactctcgctactgttattttc 404 Query: 495 tggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgcaggggacggtgtg 554 |||||||| ||||||||||| ||||||||||||||||| |||| || || |||||||| Sbjct: 405 tggaggacatctcccatttcaatcgctgtgatttgcaacttgtgtgccggagacggtgta 464 Query: 555 gccgacatagccgggaggcgatacgggcatgtgaagctccctcacaaccctgacaaatcc 614 || |||||||| || |||| | || | | | ||||| ||| |||||||||||||||| Sbjct: 465 gctgacatagctggaaggcagttaggccgtataaagcttccttacaaccctgacaaatct 524 Query: 615 tacgccggaagcatcgcaatgttctttgccggattcatcgcatcgatcctgttcatgtgc 674 ||||| ||| ||| ||||||||||| || || ||| | ||||| ||||||| ||||||| Sbjct: 525 tacgctggatccattgcaatgttcttagctggtttccttgcatcaatcctgtacatgtgc 584 Query: 675 tacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgccttcggcatc 734 ||||||||||| ||||| || || ||| |||||||||||||||| |||||| ||| | Sbjct: 585 tacttccacctcttcggatttgtcgaggagagctggaccatggtgattgcctttggcgtg 644 Query: 735 acgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttggacgataac 794 || |||||| | || |||||||| ||||| ||||| ||||||| ||||||||||| || Sbjct: 645 acatcgctttctgctgcaattgtggagtcgctccctatcagcacacgcttggacgacaat 704 Query: 795 ctgac 799 ||||| Sbjct: 705 ctgac 709
>dbj|AK109049.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E02, full insert sequence Length = 1059 Score = 406 bits (205), Expect = e-110 Identities = 550/665 (82%) Strand = Plus / Plus Query: 135 ctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggcggtgctccgcttc 194 ||||||||||||||||| ||||||||||||||| | ||| | || ||||| |||||| Sbjct: 45 ctccgggacgccggcgccgccgtgctcaccggagccaccgcgctcgccgtgcttcgcttc 104 Query: 195 tgggaggaggtcggcaaccgcgccctcctggaccaaaaactctgcaggaagctggtgcac 254 ||||| ||||||||||||||||||||| ||||||| ||||| |||||||| || |||||| Sbjct: 105 tgggaagaggtcggcaaccgcgccctcttggaccagaaactttgcaggaaactcgtgcac 164 Query: 255 atcagtgtcgggctggtatatttccttatgtggcctctgttcagtgcagatgatgtctat 314 || | ||| || | ||||| ||||| ||||||||| |||||||||| |||||||||||| Sbjct: 165 attactgttggcttagtatacttcctcatgtggcctttgttcagtgcggatgatgtctat 224 Query: 315 gctccatttcttgcttgcatcgtcattgcactaaacatcgtaaaggtgactttgattggc 374 |||||||||||||||| ||| ||||||||| | |||||| ||||||| || |||||||| Sbjct: 225 gctccatttcttgcttccattgtcattgcattcaacatcataaaggttaccttgattgga 284 Query: 375 ctcggtgtagttaaagatgatggcgtcgttaactcaatgacaagaaatggagactataga 434 || ||| | || ||||||||||| ||| ||||||| ||||| || || |||||| |||| Sbjct: 285 cttggtattgtcaaagatgatggtgtcattaactccatgaccaggaacggagaccctaga 344 Query: 435 gagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatcttt 494 |||||||| ||||| || || || ||||| ||| |||| |||||| |||| || || || Sbjct: 345 gagcttcttaaaggaccactgtactacgcttgtgctatgactctcgctactgttattttc 404 Query: 495 tggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgcaggggacggtgtg 554 |||||||| ||||||||||| ||||||||||||||||| |||| || || |||||||| Sbjct: 405 tggaggacatctcccatttcaatcgctgtgatttgcaacttgtgtgccggagacggtgta 464 Query: 555 gccgacatagccgggaggcgatacgggcatgtgaagctccctcacaaccctgacaaatcc 614 || |||||||| || |||| | || | | | ||||| ||| |||||||||||||||| Sbjct: 465 gctgacatagctggaaggcagttaggccgtataaagcttccttacaaccctgacaaatct 524 Query: 615 tacgccggaagcatcgcaatgttctttgccggattcatcgcatcgatcctgttcatgtgc 674 ||||| ||| ||| ||||||||||| || || ||| | ||||| ||||||| ||||||| Sbjct: 525 tacgctggatccattgcaatgttcttagctggtttccttgcatcaatcctgtacatgtgc 584 Query: 675 tacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgccttcggcatc 734 ||||||||||| ||||| || || ||| |||||||||||||||| |||||| ||| | Sbjct: 585 tacttccacctcttcggatttgtcgaggagagctggaccatggtgattgcctttggcgtg 644 Query: 735 acgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttggacgataac 794 || |||||| | || |||||||| ||||| ||| | ||||||| ||||||||||| || Sbjct: 645 acatcgctttctgctgcaattgtggagtcgctctctatcagcacacgcttggacgacaat 704 Query: 795 ctgac 799 ||||| Sbjct: 705 ctgac 709
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 113 bits (57), Expect = 1e-21 Identities = 114/133 (85%) Strand = Plus / Minus Query: 296 cagtgcagatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgt 355 |||||| |||||||||||||||||||||||||||| ||| ||||||||| | |||||| | Sbjct: 289942 cagtgcggatgatgtctatgctccatttcttgcttccattgtcattgcattcaacatcat 289883 Query: 356 aaaggtgactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgac 415 |||||| || |||||||| || ||| | || ||||||||||| ||| ||||||| ||||| Sbjct: 289882 aaaggttaccttgattggacttggtattgtcaaagatgatggtgtcattaactccatgac 289823 Query: 416 aagaaatggagac 428 || || |||||| Sbjct: 289822 caggaacggagac 289810 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Minus Query: 135 ctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggcggtgctccgcttc 194 ||||||||||||||||| ||||||||||||||| | ||| | || ||||| |||||| Sbjct: 290469 ctccgggacgccggcgccgccgtgctcaccggagccaccgcgctcgccgtgcttcgcttc 290410 Query: 195 tgggaggaggtcggcaaccgcgccctcctggacca 229 ||||| ||||||||||||||||||||| ||||||| Sbjct: 290409 tgggaagaggtcggcaaccgcgccctcttggacca 290375 Score = 87.7 bits (44), Expect = 8e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 668 catgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgcctt 727 |||||||||||||||||| ||||| || || ||| |||||||||||||||| |||||| Sbjct: 289198 catgtgctacttccacctcttcggatttgtcgaggagagctggaccatggtgattgcctt 289139 Query: 728 cggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttgga 787 ||| | || |||||| | || |||||||| ||||| ||||| ||||||| |||||||| Sbjct: 289138 tggcgtgacatcgctttctgctgcaattgtggagtcgctccctatcagcacacgcttgga 289079 Query: 788 cgataacctgac 799 ||| || ||||| Sbjct: 289078 cgacaatctgac 289067 Score = 83.8 bits (42), Expect = 1e-12 Identities = 105/126 (83%) Strand = Plus / Minus Query: 432 agagagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatc 491 ||||||||||| ||||| || || || ||||| ||| |||| |||||| |||| || || Sbjct: 289641 agagagcttcttaaaggaccactgtactacgcttgtgctatgactctcgctactgttatt 289582 Query: 492 ttttggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgcaggggacggt 551 || |||||||| ||||||||||| ||||||||||||||||| |||| || || |||||| Sbjct: 289581 ttctggaggacatctcccatttcaatcgctgtgatttgcaacttgtgtgccggagacggt 289522 Query: 552 gtggcc 557 ||||| Sbjct: 289521 atggcc 289516 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Minus Query: 588 aagctccctcacaaccctgacaaatcctacgccggaagcatcgcaatgttctttgccgga 647 ||||| ||| |||||||||||||||| ||||| ||| ||| ||||||||||| || || Sbjct: 289360 aagcttccttacaaccctgacaaatcttacgctggatccattgcaatgttcttagctggt 289301 Query: 648 ttcatcgcatcgatcctgt 666 ||| | ||||| ||||||| Sbjct: 289300 ttccttgcatcaatcctgt 289282
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 113 bits (57), Expect = 1e-21 Identities = 114/133 (85%) Strand = Plus / Minus Query: 296 cagtgcagatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgt 355 |||||| |||||||||||||||||||||||||||| | | ||||||||| | |||||| | Sbjct: 262850 cagtgcggatgatgtctatgctccatttcttgcttcccttgtcattgcattcaacatcat 262791 Query: 356 aaaggtgactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgac 415 |||||| || |||||||| || ||| | || ||||||||||||||| ||||||| ||||| Sbjct: 262790 aaaggttaccttgattggacttggtattgtcaaagatgatggcgtcattaactccatgac 262731 Query: 416 aagaaatggagac 428 || || |||||| Sbjct: 262730 caggaacggagac 262718 Score = 111 bits (56), Expect = 6e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 122 ggagagcccgcttctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggc 181 |||||||||||| ||||||||||||||||| ||||||||||||||| | |||| | || Sbjct: 263400 ggagagcccgctgctccgggacgccggcgccgccgtgctcaccggagccaccgccctcgc 263341 Query: 182 ggtgctccgcttctgggaggaggtcggcaaccgcgccctcctggacca 229 ||||| || |||||||| ||||||||||||||||||||| ||||||| Sbjct: 263340 cgtgcttcgtttctgggaagaggtcggcaaccgcgccctcttggacca 263293 Score = 81.8 bits (41), Expect = 5e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 432 agagagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatc 491 ||||||||||| ||||| || || || ||||| ||| ||||||| ||| |||| ||||| Sbjct: 262572 agagagcttcttaaaggtccactgtactacgcttgtgctataacactcgctactgtaatt 262513 Query: 492 ttttggaggacgtctcccatttcgatcgctgtgatttgcaa 532 || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 262512 ttctggaggacatctcccatttcaatcgcagtgatttgcaa 262472 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Minus Query: 668 catgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgcctt 727 |||||||||||||||||| || || || || ||| ||||||||| |||||| ||||| Sbjct: 262098 catgtgctacttccacctctttggatttgtcgaggagagctggagcatggtgatcgcctt 262039 Query: 728 cggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttgga 787 || | || |||||||| || |||||||| ||||||||||| ||||||| ||| |||| Sbjct: 262038 tggtgtgacatcgcttgctgctgcaattgtggagtcactccctatcagcacacgcctgga 261979 Query: 788 cgataacctgac 799 ||| || ||||| Sbjct: 261978 cgacaatctgac 261967 Score = 52.0 bits (26), Expect = 0.005 Identities = 95/118 (80%) Strand = Plus / Minus Query: 549 ggtgtggccgacatagccgggaggcgatacgggcatgtgaagctccctcacaaccctgac 608 ||||| || |||||||| || ||||||| ||| ||||| ||||| ||| |||||||||| Sbjct: 262310 ggtgtagctgacatagctggaaggcgattcggacatgtaaagcttccttacaaccctgat 262251 Query: 609 aaatcctacgccggaagcatcgcaatgttctttgccggattcatcgcatcgatcctgt 666 || || || || ||| ||| ||||||||||| || || ||| | ||||| ||||||| Sbjct: 262250 aagtcttatgctggatccattgcaatgttcttagctggtttccttgcatcaatcctgt 262193 Score = 48.1 bits (24), Expect = 0.070 Identities = 57/68 (83%) Strand = Plus / Minus Query: 231 aaactctgcaggaagctggtgcacatcagtgtcgggctggtatatttccttatgtggcct 290 |||||||||||||| || ||||| || | ||| || | ||||| ||||||||||||||| Sbjct: 263036 aaactctgcaggaaactcgtgcatattactgttggcttagtatacttccttatgtggcct 262977 Query: 291 ctgttcag 298 ||||||| Sbjct: 262976 ttgttcag 262969
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 113 bits (57), Expect = 1e-21 Identities = 114/133 (85%) Strand = Plus / Plus Query: 296 cagtgcagatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgt 355 |||||| |||||||||||||||||||||||||||| | | ||||||||| | |||||| | Sbjct: 42143 cagtgcggatgatgtctatgctccatttcttgcttcccttgtcattgcattcaacatcat 42202 Query: 356 aaaggtgactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgac 415 |||||| || |||||||| || ||| | || ||||||||||||||| ||||||| ||||| Sbjct: 42203 aaaggttaccttgattggacttggtattgtcaaagatgatggcgtcattaactccatgac 42262 Query: 416 aagaaatggagac 428 || || |||||| Sbjct: 42263 caggaacggagac 42275 Score = 111 bits (56), Expect = 6e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 122 ggagagcccgcttctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggc 181 |||||||||||| ||||||||||||||||| ||||||||||||||| | |||| | || Sbjct: 41593 ggagagcccgctgctccgggacgccggcgccgccgtgctcaccggagccaccgccctcgc 41652 Query: 182 ggtgctccgcttctgggaggaggtcggcaaccgcgccctcctggacca 229 ||||| || |||||||| ||||||||||||||||||||| ||||||| Sbjct: 41653 cgtgcttcgtttctgggaagaggtcggcaaccgcgccctcttggacca 41700 Score = 81.8 bits (41), Expect = 5e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 432 agagagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatc 491 ||||||||||| ||||| || || || ||||| ||| ||||||| ||| |||| ||||| Sbjct: 42421 agagagcttcttaaaggtccactgtactacgcttgtgctataacactcgctactgtaatt 42480 Query: 492 ttttggaggacgtctcccatttcgatcgctgtgatttgcaa 532 || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 42481 ttctggaggacatctcccatttcaatcgcagtgatttgcaa 42521 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 668 catgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgcctt 727 |||||||||||||||||| || || || || ||| ||||||||| |||||| ||||| Sbjct: 42895 catgtgctacttccacctctttggatttgtcgaggagagctggagcatggtgatcgcctt 42954 Query: 728 cggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttgga 787 || | || |||||||| || |||||||| ||||||||||| ||||||| ||| |||| Sbjct: 42955 tggtgtgacatcgcttgctgctgcaattgtggagtcactccctatcagcacacgcctgga 43014 Query: 788 cgataacctgac 799 ||| || ||||| Sbjct: 43015 cgacaatctgac 43026 Score = 52.0 bits (26), Expect = 0.005 Identities = 95/118 (80%) Strand = Plus / Plus Query: 549 ggtgtggccgacatagccgggaggcgatacgggcatgtgaagctccctcacaaccctgac 608 ||||| || |||||||| || ||||||| ||| ||||| ||||| ||| |||||||||| Sbjct: 42683 ggtgtagctgacatagctggaaggcgattcggacatgtaaagcttccttacaaccctgat 42742 Query: 609 aaatcctacgccggaagcatcgcaatgttctttgccggattcatcgcatcgatcctgt 666 || || || || ||| ||| ||||||||||| || || ||| | ||||| ||||||| Sbjct: 42743 aagtcttatgctggatccattgcaatgttcttagctggtttccttgcatcaatcctgt 42800 Score = 48.1 bits (24), Expect = 0.070 Identities = 57/68 (83%) Strand = Plus / Plus Query: 231 aaactctgcaggaagctggtgcacatcagtgtcgggctggtatatttccttatgtggcct 290 |||||||||||||| || ||||| || | ||| || | ||||| ||||||||||||||| Sbjct: 41957 aaactctgcaggaaactcgtgcatattactgttggcttagtatacttccttatgtggcct 42016 Query: 291 ctgttcag 298 ||||||| Sbjct: 42017 ttgttcag 42024
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 113 bits (57), Expect = 1e-21 Identities = 114/133 (85%) Strand = Plus / Minus Query: 296 cagtgcagatgatgtctatgctccatttcttgcttgcatcgtcattgcactaaacatcgt 355 |||||| |||||||||||||||||||||||||||| ||| ||||||||| | |||||| | Sbjct: 22993 cagtgcggatgatgtctatgctccatttcttgcttccattgtcattgcattcaacatcat 22934 Query: 356 aaaggtgactttgattggcctcggtgtagttaaagatgatggcgtcgttaactcaatgac 415 |||||| || |||||||| || ||| | || ||||||||||| ||| ||||||| ||||| Sbjct: 22933 aaaggttaccttgattggacttggtattgtcaaagatgatggtgtcattaactccatgac 22874 Query: 416 aagaaatggagac 428 || || |||||| Sbjct: 22873 caggaacggagac 22861 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Minus Query: 135 ctccgggacgccggcgctgccgtgctcaccggatgcgtcgccttggcggtgctccgcttc 194 ||||||||||||||||| ||||||||||||||| | ||| | || ||||| |||||| Sbjct: 23520 ctccgggacgccggcgccgccgtgctcaccggagccaccgcgctcgccgtgcttcgcttc 23461 Query: 195 tgggaggaggtcggcaaccgcgccctcctggacca 229 ||||| ||||||||||||||||||||| ||||||| Sbjct: 23460 tgggaagaggtcggcaaccgcgccctcttggacca 23426 Score = 87.7 bits (44), Expect = 8e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 668 catgtgctacttccaccttttcgggttcgtggagcagagctggaccatggtcgctgcctt 727 |||||||||||||||||| ||||| || || ||| |||||||||||||||| |||||| Sbjct: 22249 catgtgctacttccacctcttcggatttgtcgaggagagctggaccatggtgattgcctt 22190 Query: 728 cggcatcacgtcgcttgcagcggcaattgtcgagtcactcccggtcagcacgcgcttgga 787 ||| | || |||||| | || |||||||| ||||| ||||| ||||||| |||||||| Sbjct: 22189 tggcgtgacatcgctttctgctgcaattgtggagtcgctccctatcagcacacgcttgga 22130 Query: 788 cgataacctgac 799 ||| || ||||| Sbjct: 22129 cgacaatctgac 22118 Score = 83.8 bits (42), Expect = 1e-12 Identities = 105/126 (83%) Strand = Plus / Minus Query: 432 agagagcttctcaaaggcccgctctattacgcgtgtactataactctcactaccgtaatc 491 ||||||||||| ||||| || || || ||||| ||| |||| |||||| |||| || || Sbjct: 22692 agagagcttcttaaaggaccactgtactacgcttgtgctatgactctcgctactgttatt 22633 Query: 492 ttttggaggacgtctcccatttcgatcgctgtgatttgcaatctgtgcgcaggggacggt 551 || |||||||| ||||||||||| ||||||||||||||||| |||| || || |||||| Sbjct: 22632 ttctggaggacatctcccatttcaatcgctgtgatttgcaacttgtgtgccggagacggt 22573 Query: 552 gtggcc 557 ||||| Sbjct: 22572 atggcc 22567 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Minus Query: 588 aagctccctcacaaccctgacaaatcctacgccggaagcatcgcaatgttctttgccgga 647 ||||| ||| |||||||||||||||| ||||| ||| ||| ||||||||||| || || Sbjct: 22411 aagcttccttacaaccctgacaaatcttacgctggatccattgcaatgttcttagctggt 22352 Query: 648 ttcatcgcatcgatcctgt 666 ||| | ||||| ||||||| Sbjct: 22351 ttccttgcatcaatcctgt 22333
>gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley stem rust resistance protein (Rpg1) gene, complete cds Length = 17974 Score = 71.9 bits (36), Expect = 5e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1057 acccccggcctctgcatctgaggcgatgcatgtagccattttattaattatttataaaga 1116 |||||||||||||||||||| | |||||||| ||||||||||||||||||| | ||||| Sbjct: 5230 acccccggcctctgcatctg-gaagatgcatgcagccattttattaattattcacaaaga 5288 Query: 1117 ccttacaa 1124 | |||||| Sbjct: 5289 ctttacaa 5296
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 63.9 bits (32), Expect = 1e-06 Identities = 67/76 (88%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 1056 gacccccggcctctgcatctgaggcgatgcatgtagccattttattaattatt-tataaa 1114 ||||||||||||||||||||| |||||||||| |||| ||||||||||||| | || Sbjct: 38731 gacccccggcctctgcatctg-ggcgatgcatacggccactttattaattattctcacaa 38673 Query: 1115 gaccttacaaagtaat 1130 |||||||||||||||| Sbjct: 38672 gaccttacaaagtaat 38657 Score = 54.0 bits (27), Expect = 0.001 Identities = 62/71 (87%), Gaps = 2/71 (2%) Strand = Plus / Minus Query: 1058 cccccggcctctgcatctgaggcgatgcatgtagccattttattaattatttata-aaga 1116 |||| |||||||||||||| |||||||||| |||| |||||||||||||| | |||| Sbjct: 2439 ccccgggcctctgcatctg-ggcgatgcatacggccactttattaattattttcataaga 2381 Query: 1117 ccttacaaagt 1127 ||||||||||| Sbjct: 2380 ccttacaaagt 2370 Score = 52.0 bits (26), Expect = 0.005 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcatgtagccattttatta 1102 ||||| |||| | ||||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 72168 agaaaaggaggatgacccccggcctctgcatctg-ggagatgcatacggccattttattg 72110 Query: 1103 attatt 1108 |||||| Sbjct: 72109 attatt 72104
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 63.9 bits (32), Expect = 1e-06 Identities = 67/76 (88%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 1056 gacccccggcctctgcatctgaggcgatgcatgtagccattttattaattatt-tataaa 1114 ||||||||||||||||||||| |||||||||| |||| ||||||||||||| | || Sbjct: 33399 gacccccggcctctgcatctg-ggcgatgcatacggccactttattaattattctcacaa 33341 Query: 1115 gaccttacaaagtaat 1130 |||||||||||||||| Sbjct: 33340 gaccttacaaagtaat 33325
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 63.9 bits (32), Expect = 1e-06 Identities = 67/76 (88%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 1056 gacccccggcctctgcatctgaggcgatgcatgtagccattttattaattatt-tataaa 1114 ||||||||||||||||||||| |||||||||| |||| ||||||||||||| | || Sbjct: 12414 gacccccggcctctgcatctg-ggcgatgcatacggccactttattaattattctcacaa 12356 Query: 1115 gaccttacaaagtaat 1130 |||||||||||||||| Sbjct: 12355 gaccttacaaagtaat 12340 Score = 52.0 bits (26), Expect = 0.005 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcatgtagccattttatta 1102 ||||| |||| | ||||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 45851 agaaaaggaggatgacccccggcctctgcatctg-ggagatgcatacggccattttattg 45793 Query: 1103 attatt 1108 |||||| Sbjct: 45792 attatt 45787
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 63.9 bits (32), Expect = 1e-06 Identities = 67/76 (88%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 1056 gacccccggcctctgcatctgaggcgatgcatgtagccattttattaattatt-tataaa 1114 ||||||||||||||||||||| |||||||||| |||| ||||||||||||| | || Sbjct: 10510 gacccccggcctctgcatctg-ggcgatgcatacggccactttattaattattctcacaa 10452 Query: 1115 gaccttacaaagtaat 1130 |||||||||||||||| Sbjct: 10451 gaccttacaaagtaat 10436
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 60.0 bits (30), Expect = 2e-05 Identities = 62/70 (88%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 1059 ccccggcctctgcatctgaggcgatgcatgtagccattttattaattatt-tataaagac 1117 |||||||||||||||||| |||||||||| |||| ||||||||||||| | |||||| Sbjct: 200397 ccccggcctctgcatctg-ggcgatgcatacggccactttattaattattatcaaaagac 200455 Query: 1118 cttacaaagt 1127 |||||||||| Sbjct: 200456 cttacaaagt 200465
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 60.0 bits (30), Expect = 2e-05 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcatgtagccattttatta 1102 ||||| |||| | ||||||||||||||||||||| |||||||||| | ||| ||||||| Sbjct: 36934 agaaaaggaggatgacccccggcctctgcatctg-ggcgatgcatacaaccactttatta 36876 Query: 1103 attatt 1108 |||||| Sbjct: 36875 attatt 36870
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 56.0 bits (28), Expect = 3e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 1059 ccccggcctctgcatctgaggcgatgcatgtagccattttattaattatttataaagacc 1118 |||||||||||||||||| | |||||||| |||||| |||||||||||| ||||| | Sbjct: 74891 ccccggcctctgcatctggag-gatgcatgcagccatattattaattattctcaaagaac 74833 Query: 1119 ttacaaagtaat 1130 ||||||||||| Sbjct: 74832 atacaaagtaat 74821
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1080 cgatgcatgtagccattttattaattatttataaa 1114 ||||||||| || |||||||||||||||||||||| Sbjct: 67380 cgatgcatgcagtcattttattaattatttataaa 67346
>emb|AM050559.1| Hordeum vulgare NH1 gene for NPR1-like 1 protein, exons 1-4 Length = 5716 Score = 52.0 bits (26), Expect = 0.005 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcatgtagccattttatta 1102 ||||| |||| | |||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 2359 agaaaaggaggatgacccccggcctctgcatttg-ggagatgcatgcggccattttattg 2417 Query: 1103 attatt 1108 |||||| Sbjct: 2418 attatt 2423
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman Birk trypsin inhibitor gene, complete cds; Stowaway MITE, complete sequence; and insertion sequences xl_tt1a and xl_tt1b putative ripening related protein genes, complete cds Length = 26073 Score = 52.0 bits (26), Expect = 0.005 Identities = 73/86 (84%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcatgtagccattttatta 1102 ||||| |||| | ||||||||| |||||||||| | ||||||||| ||||| || |||| Sbjct: 9309 agaaaaggaggaggacccccggtttctgcatctg-gacgatgcatgcagccacttaatta 9367 Query: 1103 attatttata-aagaccttacaaagt 1127 |||||| | | ||||||||||||||| Sbjct: 9368 attattcacataagaccttacaaagt 9393
>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence Length = 228427 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 234 ctctgcaggaagctggtgcacatcagtgt 262 |||||||||||||||| |||||||||||| Sbjct: 86721 ctctgcaggaagctggcgcacatcagtgt 86693
>gb|AY622793.2| Aegilops searsii cultivar TA 2355 puroindoline a (Pina-Ss1) gene, Pina-Ss1-b allele, complete cds Length = 1396 Score = 50.1 bits (25), Expect = 0.018 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcat 1087 ||||| |||| | ||||||||||||||||||||| |||||||||| Sbjct: 564 agaaaaggaggatgacccccggcctctgcatctg-ggcgatgcat 521
>gb|AY622792.2| Aegilops searsii cultivar TA 1837 puroindoline a (Pina-Ss1) gene, Pina-Ss1-a allele, complete cds Length = 1395 Score = 50.1 bits (25), Expect = 0.018 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 1043 agaaagggagaaagacccccggcctctgcatctgaggcgatgcat 1087 ||||| |||| | ||||||||||||||||||||| |||||||||| Sbjct: 563 agaaaaggaggatgacccccggcctctgcatctg-ggcgatgcat 520
>gb|AY123939.1| Aegilops tauschii putative RGA protein 567A-4.7 gene, partial cds Length = 4690 Score = 48.1 bits (24), Expect = 0.070 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 1056 gacccccggcctctgcatctgaggcgatgcat 1087 ||||||||||||||||||||| |||||||||| Sbjct: 1668 gacccccggcctctgcatctg-ggcgatgcat 1638
>emb|BX957287.9| Zebrafish DNA sequence from clone DKEYP-59A8 in linkage group 20, complete sequence Length = 154419 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 tatctgtcattctgtctgccagt 25 ||||||||||||||||||||||| Sbjct: 5017 tatctgtcattctgtctgccagt 5039
>ref|XM_562879.1| Anopheles gambiae str. PEST ENSANGP00000026634 (ENSANGG00000023837), partial mRNA Length = 729 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 850 gtggtggaggtggtgccggaagc 872 ||||||||||||||||||||||| Sbjct: 679 gtggtggaggtggtgccggaagc 701
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 872 cggcggcaggagcagcatcttg 893 |||||||||||||||||||||| Sbjct: 1583811 cggcggcaggagcagcatcttg 1583790
>ref|XR_020607.1| PREDICTED: Pan troglodytes similar to hexokinase II (LOC740980), mRNA Length = 4732 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 attggcctcggtgtagttaaag 390 |||||||||||||||||||||| Sbjct: 4103 attggcctcggtgtagttaaag 4124
>gb|AY951948.1| Triticum monococcum CRT/DRE binding factor 14 (CBF14) gene, complete cds Length = 5244 Score = 44.1 bits (22), Expect = 1.1 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 1059 ccccggcctctgcatctgaggcgatgcatgtagccattttattaattatttataaagacc 1118 |||||||||||||||||| || ||||||| |||| |||||| ||||||| | |||| Sbjct: 2091 ccccggcctctgcatctg-ggagatgcatacggccactttattgattattttcgaggacc 2149 Query: 1119 ttacaaagta 1128 |||||||||| Sbjct: 2150 ttacaaagta 2159
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 855 ggaggtggtgccggaagcggcg 876 |||||||||||||||||||||| Sbjct: 4406242 ggaggtggtgccggaagcggcg 4406221
>gb|AC092159.4| Homo sapiens BAC clone RP11-455F15 from 2, complete sequence Length = 82115 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1096 tttattaattatttataaagaccttacaaa 1125 |||||||||||||| |||| |||||||||| Sbjct: 52016 tttattaattatttttaaataccttacaaa 52045
>gb|AC153629.3| Mus musculus 6 BAC RP23-462O13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177194 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1047 agggagaaagacccccggcctctgca 1072 ||||||||||||||| |||||||||| Sbjct: 110959 agggagaaagaccccaggcctctgca 110984
>ref|XM_001017902.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00617800) mRNA, complete cds Length = 11115 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1092 ccattttattaattatttata 1112 ||||||||||||||||||||| Sbjct: 9104 ccattttattaattatttata 9084
>ref|NM_001055823.1| Oryza sativa (japonica cultivar-group) Os03g0200400 (Os03g0200400) mRNA, complete cds Length = 820 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 atgttggtggtggaggtggtg 864 ||||||||||||||||||||| Sbjct: 257 atgttggtggtggaggtggtg 237
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 201 gaggtcggcaaccgcgccctcctggacca 229 ||||||||||| |||||||||||||||| Sbjct: 5098371 gaggtcggcaaaagcgccctcctggacca 5098343
>ref|XM_632579.1| Dictyostelium discoideum AX4 RasGEF domain-containing protein (gflB) mRNA, complete cds Length = 4806 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 845 tgttggtggtggaggtggtgc 865 ||||||||||||||||||||| Sbjct: 165 tgttggtggtggaggtggtgc 145
>ref|XM_629711.1| Dictyostelium discoideum AX4 putative protein serine/threonine kinase (DDB_0230010) mRNA, complete cds Length = 3675 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 845 tgttggtggtggaggtggtgc 865 ||||||||||||||||||||| Sbjct: 918 tgttggtggtggaggtggtgc 898
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 atgttggtggtggaggtggtg 864 ||||||||||||||||||||| Sbjct: 63271 atgttggtggtggaggtggtg 63251
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gcgctgccgtgctcaccggat 168 ||||||||||||||||||||| Sbjct: 617564 gcgctgccgtgctcaccggat 617544
>emb|CR628387.12| Zebrafish DNA sequence from clone DKEY-59J17 in linkage group 17, complete sequence Length = 220664 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cttctgggaggaggtcggcaa 211 ||||||||||||||||||||| Sbjct: 99785 cttctgggaggaggtcggcaa 99765
>emb|AJ715544.1| Xenopus tropicalis partial mRNA for alpha-2,8-sialyltransferase ST8Sia III (siat 8C gene) Length = 1128 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 aaactctgcaggaagctggtg 251 ||||||||||||||||||||| Sbjct: 1065 aaactctgcaggaagctggtg 1045
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 844 atgttggtggtggaggtggtg 864 ||||||||||||||||||||| Sbjct: 16649 atgttggtggtggaggtggtg 16669
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1094 attttattaattatttataaa 1114 ||||||||||||||||||||| Sbjct: 766829 attttattaattatttataaa 766809
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtatctgtcattctgtctgc 21 ||||||||||||||||||||| Sbjct: 6069719 ggtatctgtcattctgtctgc 6069739
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 atgttggtggtggaggtggtg 864 ||||||||||||||||||||| Sbjct: 5239084 atgttggtggtggaggtggtg 5239064
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ggtcggcaaccgcgccctcct 223 ||||||||||||||||||||| Sbjct: 154654 ggtcggcaaccgcgccctcct 154674
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1094 attttattaattatttataaa 1114 ||||||||||||||||||||| Sbjct: 52168 attttattaattatttataaa 52148
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1094 attttattaattatttataaa 1114 ||||||||||||||||||||| Sbjct: 139370 attttattaattatttataaa 139350
>gb|AF538053.1|MBREV Monosiga brevicollis mitochondrion, complete genome Length = 76568 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1094 attttattaattatttataaa 1114 ||||||||||||||||||||| Sbjct: 36486 attttattaattatttataaa 36466
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtatctgtcattctgtctgc 21 ||||||||||||||||||||| Sbjct: 124889 ggtatctgtcattctgtctgc 124909
>dbj|AK107086.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G06, full insert sequence Length = 820 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 atgttggtggtggaggtggtg 864 ||||||||||||||||||||| Sbjct: 257 atgttggtggtggaggtggtg 237
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cttctgggaggaggtcggcaa 211 ||||||||||||||||||||| Sbjct: 33985 cttctgggaggaggtcggcaa 33965
>gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2, complete sequence Length = 174149 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gatgatgtctatgctccattt 323 ||||||||||||||||||||| Sbjct: 111522 gatgatgtctatgctccattt 111502
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105 Length = 340000 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ctgcagcagccacgaatctgt 77 ||||||||||||||||||||| Sbjct: 332982 ctgcagcagccacgaatctgt 332962
>gb|AY279557.1| Babesia bovis putative variant erythrocyte surface antigen-1a related protein (ves1-betaG) and putative variant erythrocyte surface antigen-1a (ves1-alphaF) genes, partial cds Length = 1810 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 848 tggtggtggaggtggtgccgg 868 ||||||||||||||||||||| Sbjct: 619 tggtggtggaggtggtgccgg 599
>dbj|AP000476.2| Homo sapiens genomic DNA, chromosome 21q21.2, clone:B86D9, LL56-APP region, complete sequence Length = 171452 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ctgcagcagccacgaatctgt 77 ||||||||||||||||||||| Sbjct: 168363 ctgcagcagccacgaatctgt 168343 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 183,002,654 Number of extensions: 9615025 Number of successful extensions: 223942 Number of sequences better than 10.0: 55 Number of HSP's gapped: 223915 Number of HSP's successfully gapped: 86 Length of query: 1145 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1122 Effective length of database: 18,503,978,556 Effective search space: 20761463939832 Effective search space used: 20761463939832 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
