ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf124n04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109388:Os03g0861800 | 360 | 2e-99 | 2 | AK104839:Os03g0116800 | 350 | 2e-96 | 3 | AK066955:Os03g0116800 | 350 | 2e-96 | 4 | AK068434:Os03g0861800 | 334 | 1e-91 | 5 | AK068678:Os03g0116800 | 246 | 3e-65 | 6 | AF358762:Os03g0861800 | 114 | 2e-25 | 7 | AK112089:Os11g0182400 | 35 | 0.13 | 8 | AK100366:Os04g0667700 | 33 | 0.51 | 9 | AK106771:Os12g0607800 | 31 | 2.5 | 10 | AK071152:Os12g0273700 | 31 | 2.5 | 11 | Os01g0823400:Os01g0823400 | 30 | 4.3 | 12 | Os07g0517700:Os07g0517700 | 30 | 5.6 | 13 | Os02g0194600:Os02g0194600 | 30 | 5.6 | 14 | AK107049:Os01g0557400 | 30 | 5.6 | 15 | AK103152:Os06g0166000 | 30 | 5.6 | 16 | AK069736:Os03g0423000 | 30 | 5.6 | 17 | AK060317:Os06g0166000 | 30 | 5.6 | 18 | AK121607:Os09g0261100 | 29 | 7.3 | 19 | Os06g0313000:Os06g0313000 | 29 | 9.6 | 20 | AK121015:Os02g0753000 | 29 | 9.6 |
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>AK109388:Os03g0861800 | Length = 402 Score = 360 bits (923), Expect = 2e-99 Identities = 195/342 (57%), Positives = 228/342 (66%), Gaps = 26/342 (7%) Frame = +3 Query: 168 EEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCLRVYPE 347 EE DFLE +GPD SA VF+ LD PADLARA+AVSRSWRRFV+ N FSK+ CLR+ PE Sbjct: 12 EEEARFDFLEWIGPDTSAAVFTFLDHPADLARASAVSRSWRRFVVRNGFSKIQCLRLCPE 71 Query: 348 VSNFTRVELGSFSNAHQNAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINHCVGA 527 SNFTR+ A +A SD HR YMHLS+ LL +P+DCI C+GA Sbjct: 72 ASNFTRIIT---KQAIASASESDAE------HQHRAYMHLSYALLLD-DPQDCIIRCIGA 121 Query: 528 SSTDHFPEEAIGNTLEPVDRDER-RPSYWSSGGHKDPAVPECLIYRLQSELCLVDEIKIR 704 S+TD+FPEE I NTL P D RPSYWSS GH DPAVPECL YRL+S+LCLV +I I+ Sbjct: 122 STTDNFPEETIQNTLVPTDWVAMMRPSYWSSAGHFDPAVPECLFYRLRSDLCLVQQINIQ 181 Query: 705 PFK-------------------------AFFRRNHPIYSAKHIRFHMGYVKPPLWSETHV 809 PF+ AFF+ PIYSAK++RF MGY K PL S+ V Sbjct: 182 PFRGQPTHPPSFFLLLLLNTSITCLLHPAFFQYGDPIYSAKYVRFQMGYPKTPLPSQLLV 241 Query: 810 HVQTDDGELIDDSNYIWTYTSPEFPMLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDT 989 ++G+L D NYIWTYTSP+FPMLQE+V+QSFKLP VLCIGGVVKIE LGRV K Sbjct: 242 S-HDNEGQLAADDNYIWTYTSPQFPMLQESVLQSFKLPRAVLCIGGVVKIEFLGRVQKQE 300 Query: 990 VDGLYYICVSHVQIVGKPLSQDFGVAPSKNDVVLSYYLDYHR 1115 +D LYYIC+SHVQIVG PL ++ GV P KN VVL YY D R Sbjct: 301 MDDLYYICISHVQIVGIPLPRELGVDPYKNGVVLKYYPDTRR 342
>AK104839:Os03g0116800 | Length = 396 Score = 350 bits (897), Expect = 2e-96 Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 1/306 (0%) Frame = +3 Query: 159 MSWEEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCLRV 338 M ++ RG DF++ +GPD SA++F LDDPAD+ RA AVSRSWRRFV+ N+FSK +CLR+ Sbjct: 6 MEVDDPRGWDFVDWVGPDASASIFRSLDDPADIVRAAAVSRSWRRFVVENEFSKSICLRI 65 Query: 339 YPEVSNFTRVELGSFSNAHQ-NAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINH 515 PE++NFT E S S +A SS + L D+R+Y +LS L+S DCI Sbjct: 66 CPEIANFTSAEEVSRSPPQPPHAESSHGVQRKALERDYRIYSYLSGALVSNSPSMDCILQ 125 Query: 516 CVGASSTDHFPEEAIGNTLEPVDRDERRPSYWSSGGHKDPAVPECLIYRLQSELCLVDEI 695 C+GASSTD+FP+E I NTL P DR + RPSYWSSGGH DP PE L YRL ++C+VDEI Sbjct: 126 CIGASSTDNFPDETIENTLIPHDRVKHRPSYWSSGGHDDPDTPETLTYRLNCDMCIVDEI 185 Query: 696 KIRPFKAFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDSNYIWTYTSP 875 K++PFKA+F+ HPIYS+K +RF MG+ K P S++ V V+ ++ I D NY+WTYTSP Sbjct: 186 KLQPFKAYFQYGHPIYSSKAVRFRMGHSKLPHGSDSFVTVEDENLMAIADENYVWTYTSP 245 Query: 876 EFPMLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYICVSHVQIVGKPLSQD 1055 EFPMLQENV+QSFKLP PVLCIGG+VK+ELLGRV K D YYIC+ H Q+ G+ LS Sbjct: 246 EFPMLQENVLQSFKLPRPVLCIGGIVKVELLGRVQKQEADDRYYICICHAQVRGRSLSPV 305 Query: 1056 FGVAPS 1073 F V S Sbjct: 306 FMVDTS 311
>AK066955:Os03g0116800 | Length = 396 Score = 350 bits (897), Expect = 2e-96 Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 1/306 (0%) Frame = +3 Query: 159 MSWEEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCLRV 338 M ++ RG DF++ +GPD SA++F LDDPAD+ RA AVSRSWRRFV+ N+FSK +CLR+ Sbjct: 6 MEVDDPRGWDFVDWVGPDASASIFRSLDDPADIVRAAAVSRSWRRFVVENEFSKSICLRI 65 Query: 339 YPEVSNFTRVELGSFSNAHQ-NAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINH 515 PE++NFT E S S +A SS + L D+R+Y +LS L+S DCI Sbjct: 66 CPEIANFTSAEEVSRSPPQPPHAESSHGVQRKALERDYRIYSYLSGALVSNSPSMDCILQ 125 Query: 516 CVGASSTDHFPEEAIGNTLEPVDRDERRPSYWSSGGHKDPAVPECLIYRLQSELCLVDEI 695 C+GASSTD+FP+E I NTL P DR + RPSYWSSGGH DP PE L YRL ++C+VDEI Sbjct: 126 CIGASSTDNFPDETIENTLIPHDRVKHRPSYWSSGGHDDPDTPETLTYRLNCDMCIVDEI 185 Query: 696 KIRPFKAFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDSNYIWTYTSP 875 K++PFKA+F+ HPIYS+K +RF MG+ K P S++ V V+ ++ I D NY+WTYTSP Sbjct: 186 KLQPFKAYFQYGHPIYSSKAVRFRMGHSKLPHGSDSFVTVEDENLMAIADENYVWTYTSP 245 Query: 876 EFPMLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYICVSHVQIVGKPLSQD 1055 EFPMLQENV+QSFKLP PVLCIGG+VK+ELLGRV K D YYIC+ H Q+ G+ LS Sbjct: 246 EFPMLQENVLQSFKLPRPVLCIGGIVKVELLGRVQKQEADDRYYICICHAQVRGRSLSPV 305 Query: 1056 FGVAPS 1073 F V S Sbjct: 306 FMVDTS 311
>AK068434:Os03g0861800 | Length = 316 Score = 334 bits (856), Expect = 1e-91 Identities = 174/283 (61%), Positives = 204/283 (72%), Gaps = 1/283 (0%) Frame = +3 Query: 168 EEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCLRVYPE 347 EE DFLE +GPD SA VF+ LD PADLARA+AVSRSWRRFV+ N FSK+ CLR+ PE Sbjct: 12 EEEARFDFLEWIGPDTSAAVFTFLDHPADLARASAVSRSWRRFVVRNGFSKIQCLRLCPE 71 Query: 348 VSNFTRVELGSFSNAHQNAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINHCVGA 527 SNFTR+ A +A SD HR YMHLS+ LL +P+DCI C+GA Sbjct: 72 ASNFTRIIT---KQAIASASESDAE------HQHRAYMHLSYALLLD-DPQDCIIRCIGA 121 Query: 528 SSTDHFPEEAIGNTLEPVDRDER-RPSYWSSGGHKDPAVPECLIYRLQSELCLVDEIKIR 704 S+TD+FPEE I NTL P D RPSYWSS GH DPAVPECL YRL+S+LCLV +I I+ Sbjct: 122 STTDNFPEETIQNTLVPTDWVAMMRPSYWSSAGHFDPAVPECLFYRLRSDLCLVQQINIQ 181 Query: 705 PFKAFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDSNYIWTYTSPEFP 884 PF+AFF+ PIYSAK++RF MGY K PL S+ V ++G+L D NYIWTYTSP+FP Sbjct: 182 PFRAFFQYGDPIYSAKYVRFQMGYPKTPLPSQLLVS-HDNEGQLAADDNYIWTYTSPQFP 240 Query: 885 MLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYIC 1013 MLQE+V+QSFKLP VLCIGGVVKIE LGRV K +D LYYIC Sbjct: 241 MLQESVLQSFKLPRAVLCIGGVVKIEFLGRVQKQEMDDLYYIC 283
>AK068678:Os03g0116800 | Length = 272 Score = 246 bits (628), Expect = 3e-65 Identities = 115/186 (61%), Positives = 141/186 (75%) Frame = +3 Query: 516 CVGASSTDHFPEEAIGNTLEPVDRDERRPSYWSSGGHKDPAVPECLIYRLQSELCLVDEI 695 C+GASSTD+FP+E I NTL P DR + RPSYWSSGGH DP PE L YRL ++C+VDEI Sbjct: 2 CIGASSTDNFPDETIENTLIPHDRVKHRPSYWSSGGHDDPDTPETLTYRLNCDMCIVDEI 61 Query: 696 KIRPFKAFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDSNYIWTYTSP 875 K++PFKA+F+ HPIYS+K +RF MG+ K P S++ V V+ ++ I D NY+WTYTSP Sbjct: 62 KLQPFKAYFQYGHPIYSSKAVRFRMGHSKLPHGSDSFVTVEDENLMAIADENYVWTYTSP 121 Query: 876 EFPMLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYICVSHVQIVGKPLSQD 1055 EFPMLQENV+QSFKLP PVLCIGG+VK+ELLGRV K D YYIC+ H Q+ G+ LS Sbjct: 122 EFPMLQENVLQSFKLPRPVLCIGGIVKVELLGRVQKQEADDRYYICICHAQVRGRSLSPV 181 Query: 1056 FGVAPS 1073 F V S Sbjct: 182 FMVDTS 187
>AF358762:Os03g0861800 | Length = 76 Score = 114 bits (285), Expect = 2e-25 Identities = 55/75 (73%), Positives = 62/75 (82%) Frame = +3 Query: 867 TSPEFPMLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYICVSHVQIVGKPL 1046 TSP+FPMLQE+V+QSFKLP VLCIGGVVKIE LGRV K +D LYYIC+SHVQIVG PL Sbjct: 1 TSPQFPMLQESVLQSFKLPRAVLCIGGVVKIEFLGRVQKQEMDDLYYICISHVQIVGIPL 60 Query: 1047 SQDFGVAPSKNDVVL 1091 ++ GV P KN VVL Sbjct: 61 PRELGVDPYKNGVVL 75
>AK112089:Os11g0182400 | Length = 438 Score = 35.0 bits (79), Expect = 0.13 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 Query: 195 ESLGPDNSATVFSLLDDPADLARATAVSRSWRRFV 299 ++L D +VFS LDD DLAR + V SW R + Sbjct: 33 QALNDDTLRSVFSRLDDHFDLARCSTVCNSWNRVI 67
>AK100366:Os04g0667700 | Length = 195 Score = 33.1 bits (74), Expect = 0.51 Identities = 35/105 (33%), Positives = 46/105 (43%) Frame = +3 Query: 153 PAMSWEEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCL 332 P + E G L L+ L D A + LL PAD AR+TAV R+WR N L Sbjct: 37 PQAAGEYG-SLGALDVLPIDVLAQILRLLG-PADAARSTAVCRAWRLLASDNGLWAFF-L 93 Query: 333 RVYPEVSNFTRVELGSFSNAHQNAGSSDCAGLEKLGSDHRVYMHL 467 R+ P+ EL F+ H AG + GL S + H+ Sbjct: 94 RLGPD-----PWELVVFAETHLGAGPALHPGLYYDSSPQLSFKHV 133
>AK106771:Os12g0607800 | Length = 469 Score = 30.8 bits (68), Expect = 2.5 Identities = 15/26 (57%), Positives = 15/26 (57%) Frame = +3 Query: 210 DNSATVFSLLDDPADLARATAVSRSW 287 D ATVF DPADL R AV SW Sbjct: 23 DLLATVFHTFSDPADLLRCAAVCCSW 48
>AK071152:Os12g0273700 | Length = 342 Score = 30.8 bits (68), Expect = 2.5 Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 2/144 (1%) Frame = +3 Query: 330 LRVYPEVSNFTRVELGSFSNAHQNAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCI 509 L + + NF R E G+ +++ +N G++ A + +L S H L P + Sbjct: 174 LEAFQKSKNFGRCETGNAASSSKNLGTTIAARISQLESATGPVKHTDSALSQVKPPIEAF 233 Query: 510 NHCVG--ASSTDHFPEEAIGNTLEPVDRDERRPSYWSSGGHKDPAVPECLIYRLQSELCL 683 V S T E+ + E+ + S H+ P + Q+E Sbjct: 234 PKDVPEITSRTSQLEEQRSSHVTRV---KEKLFGFTSQSAHQKANTPRKEKGKTQNE--- 287 Query: 684 VDEIKIRPFKAFFRRNHPIYSAKH 755 K RP F+RRN + H Sbjct: 288 --SFKARPLPNFYRRNKQAKDSIH 309
>Os01g0823400:Os01g0823400 | Length = 480 Score = 30.0 bits (66), Expect = 4.3 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = -2 Query: 912 KIASHFPATLEIPEMCTSRYNCYHQSAPHHQFEHVHVFQ-TRGVALHSPCGIGYVL 748 K+++HF T+ + + +SRY+ Y + + + + +F T+ A +S CG +VL Sbjct: 381 KMSNHFSKTVIVALVLSSRYDPYVMISSNCSYANTTIFNTTKTFAFYSYCGKHHVL 436
>Os07g0517700:Os07g0517700 | Length = 519 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 177 RGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRFVIAN 308 R + SLG D VF L A L RA R+WRR V ++ Sbjct: 23 RSTTTIHSLGDDLLLAVFLRLPSLAALVRAALACRAWRRAVASS 66
>Os02g0194600:Os02g0194600 | Length = 733 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -3 Query: 917 LKRLHHIFLQHWKFRRCVRPDIIAIINQLPIISLNM 810 LK LHH++LQH +F V ++ LP+ SLN+ Sbjct: 169 LKNLHHLYLQHNEFTGSV-----ILLADLPLSSLNI 199
>AK107049:Os01g0557400 | Length = 451 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 Query: 240 DDPADLARATAVSRSWRRFVIANQF 314 D+PA LARA+AV + WRR + F Sbjct: 35 DEPACLARASAVCKRWRRLLSDRAF 59
>AK103152:Os06g0166000 | Length = 228 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 192 LESLGPDNSATVFSLLDDPADLARATAVSRSWRRFV 299 +E L D A V SLL DL+ A VSR WRR V Sbjct: 35 VERLPADLLAHVLSLLPSFHDLSMAGGVSRRWRRAV 70
>AK069736:Os03g0423000 | Length = 250 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 225 VFSLLDDPADLARATAVSRSWRRFVIANQFSKLLCLRVYPEV 350 VF LLD DL V R WR + F K +C R +P + Sbjct: 13 VFPLLDGQ-DLVFCMLVCRQWREIAKDDYFWKCICARKWPSI 53
>AK060317:Os06g0166000 | Length = 251 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 192 LESLGPDNSATVFSLLDDPADLARATAVSRSWRRFV 299 +E L D A V SLL DL+ A VSR WRR V Sbjct: 35 VERLPADLLAHVLSLLPSFHDLSMAGGVSRRWRRAV 70
>AK121607:Os09g0261100 | Length = 408 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 10/43 (23%) Frame = +3 Query: 195 ESLGPDNSATVFSLLDD----------PADLARATAVSRSWRR 293 E+L P + TV +L DD PADL RA V WRR Sbjct: 4 ETLLPPPTTTVAALTDDTLLDILRRLAPADLLRAALVCHRWRR 46
>Os06g0313000:Os06g0313000 | Length = 132 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/66 (27%), Positives = 28/66 (42%) Frame = +3 Query: 360 TRVELGSFSNAHQNAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINHCVGASSTD 539 T + +F+N H +A +S AG + H ++ LS LSP G + D Sbjct: 67 TAAAVVTFANPHSSADASALAGNDGASPSHIAFLSLSQDSLSPAGRMGQRPKKPGEAPRD 126 Query: 540 HFPEEA 557 H +A Sbjct: 127 HLGADA 132
>AK121015:Os02g0753000 | Length = 367 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = +3 Query: 96 DLPAMASSRGLTMERIRELPAMSWEEGRGLDF-LESLGPDNSATVFSLL--DDPAD 254 + P + ++G + IR P++ W++G+ L+F LESLG N V + DD D Sbjct: 252 EYPKLKLTQGRKVLEIR--PSIEWDKGKALEFLLESLGFANCGDVMPVYIGDDRTD 305 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 45,869,231 Number of extensions: 1124728 Number of successful extensions: 2788 Number of sequences better than 10.0: 20 Number of HSP's gapped: 2777 Number of HSP's successfully gapped: 20 Length of query: 486 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 381 Effective length of database: 11,195,550 Effective search space: 4265504550 Effective search space used: 4265504550 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
