>LOC_Os03g02560:12003.t00146:unspliced-genomic F-box protein, putative, expressed|
Length = 3104
Score = 140 bits (301), Expect(5) = 7e-87
Identities = 58/105 (55%), Positives = 73/105 (69%)
Frame = +3 / +1
Query: 399 NAGSSDCAGLEKLGSDHRVYMHLSHGLLSPYNPKDCINHCVGASSTDHFPEEAIGNTLEP 578
+A SS + L D+R+Y +LS L+S DCI C+GASSTD+FP+E I NTL P
Sbjct: 538 HAESSHGVQRKALERDYRIYSYLSGALVSNSPSMDCILQCIGASSTDNFPDETIENTLIP 717
Query: 579 VDRDERRPSYWSSGGHKDPAVPECLIYRLQSELCLVDEIKIRPFK 713
DR + RPSYWSSGGH DP PE L YRL ++C+VDEIK++PFK
Sbjct: 718 HDRVKHRPSYWSSGGHDDPDTPETLTYRLNCDMCIVDEIKLQPFK 852
Score = 84.9 bits (179), Expect(5) = 7e-87
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +3 / +2
Query: 714 AFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDSNYIWTYTSPEFPMLQ 893
A+F+ HPIYS+K +RF MG+ K P S++ V V+ ++ I D NY+WTYTSPEFPMLQ
Sbjct: 965 AYFQYGHPIYSSKAVRFRMGHSKLPHGSDSFVTVEDENLMAIADENYVWTYTSPEFPMLQ 1144
Score = 74.4 bits (156), Expect(5) = 7e-87
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 894 ENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYI 1010
ENV+QSFKLP PVLCIGG+VK+ELLGRV K D YYI
Sbjct: 1927 ENVLQSFKLPRPVLCIGGIVKVELLGRVQKQEADDRYYI 2043
Score = 72.5 bits (152), Expect(5) = 7e-87
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3 / +2
Query: 111 ASSRGLTMERIRELPAMSWEEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWR 290
+S R T + M ++ RG DF++ +GPD SA++F LDDPAD+ RA AVSRSWR
Sbjct: 161 SSRRAATQKSSMVPVEMEVDDPRGWDFVDWVGPDASASIFRSLDDPADIVRAAAVSRSWR 340
Query: 291 RF 296
RF
Sbjct: 341 RF 346
Score = 41.8 bits (85), Expect(5) = 7e-87
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3 / +1
Query: 297 VIANQFSKLLCLRVYPEVSNFTRVE 371
V+ N+FSK +CLR+ PE++NFT E
Sbjct: 433 VVENEFSKSICLRICPEIANFTSAE 507
Score = 92.7 bits (196), Expect(6) = 2e-44
Identities = 51/91 (56%), Positives = 58/91 (63%)
Frame = -1 / -1
Query: 712 LNGRILISSTRHSSD*SLYIRHSGTAGSLWPPLDQ*DGLLSSRSTGSRVFPMASSGK*SV 533
LNG LISST H S SLY++ SG +GS WPPLDQ*+G +RS G VF M SSGK SV
Sbjct: 851 LNGCSLISSTMHISQLSLYVKVSGVSGSSWPPLDQ*EGRCLTRSCGMSVFSMVSSGKLSV 672
Query: 532 LDAPTQ*LMQSLGLYGERRPWLRCIYTL*SL 440
L+AP MQS+ E R LR L*SL
Sbjct: 671 LEAPMHCRMQSMEGLLETRAPLR*E*IL*SL 579
Score = 61.6 bits (128), Expect(6) = 2e-44
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 1012 HM*YRPSTVSLWTLPRSSIFTTPPIHRTGCGSLKDCITFSCNI 884
HM*Y S TLP SS FT PP+ RTG GSLKDC TFS +I
Sbjct: 2045 HM*YLSSASCFCTLPNSSTFTIPPMQRTGRGSLKDCSTFSYHI 1917
Score = 44.1 bits (90), Expect(6) = 2e-44
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = -1 / -3
Query: 295 NRRHERETXXXXXXXXXXXXRLKTVAELSGPRLSRKSNPRPSSHDIAGNSLILSIVNPRE 116
NRR ERET K AE SGP S KS PR SS I+ +++L V R
Sbjct: 345 NRRQERETAAARTMSAGSSRERKMEAEASGPTQSTKSQPRGSSTSISTGTILLFCVAARR 166
Query: 115 D 113
+
Sbjct: 165 E 163
Score = 35.9 bits (72), Expect(6) = 2e-44
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 371 LNTGEVGNLRINPQAQELAELICNN 297
L GE+G+LR PQA LAE + NN
Sbjct: 507 LRAGEIGDLRAYPQAYALAEFVLNN 433
Score = 31.3 bits (62), Expect(6) = 2e-44
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -2
Query: 893 LQHWKFRRCVRPDIIAIINQLPIISLNMYMCFRPEGWLYIAHVESDMFC*VYRM 732
LQH + V P II + N I+ L+ R L +AH ESD VYRM
Sbjct: 1144 LQHGELW*SVSPHIILVSNCHQILILDRNKGIRAMRKLGMAHPESDCL*RVYRM 983
Score = 23.5 bits (45), Expect(6) = 2e-44
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -1 / -2
Query: 1390 CVSFCACQLHKQIHSQFPTGSQRTSFI 1310
C FC+ + K +PT SQ +
Sbjct: 2269 CAQFCSLRCSKTSKDVYPTPSQSADML 2189
Score = 58.8 bits (122), Expect(4) = 9e-13
Identities = 29/93 (31%), Positives = 50/93 (53%)
Frame = -3 / -3
Query: 713 FEWPYLDFINETQLRLKPIYQAFWHSRIFVATARPIRRSPLVTINRFKGISYGLFREMIS 534
FEW LD I++ + ++P+ Q W I VA A P+ + L I ++ + GL E++
Sbjct: 852 FEWLQLDLIDDAHITVEPVRQGLWCVGIVVAAAGPVGGAVLDPIVWYERVLDGLVGEVVG 673
Query: 533 AGCTYAVIDAILGVVRREKTMAKMHIHPVIAPE 435
AG A+ DA+ G ++ A++ + PV+ E
Sbjct: 672 AGGADALQDAVHGGAVGDEGAAEVGVDPVVPLE 574
Score = 30.4 bits (60), Expect(4) = 9e-13
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3 / -3
Query: 1010 YVVQTINRVLVDPPKKLNLYHSTDT*NWVW*LKRLHHIFLQH 885
YVV I + + + NL+++T+ +W L+ L HIFL H
Sbjct: 2043 YVVPIICFLFLYSAQ*FNLHYTTNAKDWARKLEGL*HIFLSH 1918
Score = 28.1 bits (55), Expect(4) = 9e-13
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 379 LPNSTRVKLETSG*TRRHRSLLN*FAIT 296
L +S VKL SG R+H LLN F+ T
Sbjct: 515 LTSSALVKLAISGHIRKHMLLLNSFSTT 432
Score = 23.5 bits (45), Expect(4) = 9e-13
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 895 SCNIGNSGDV 866
+CN+GNSG+V
Sbjct: 1146 TCNMGNSGEV 1117
Score = 49.2 bits (101), Expect(2) = 6e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +2 / +3
Query: 500 GLHQSLRRCIQH*SFP*RGHRKYP*TG*S*REETVLLVERWPQRSCCARMPDI*ASVGAV 679
GLH ++ R +QH P R HR++ T S + +LLV+R P+RS R D+ A + V
Sbjct: 639 GLHPAMHRRLQHRQLPRRDHREHAHTTRSGQAPPLLLVQRRPRRSRHTRDLDVQAQL*YV 818
Query: 680 SR**NQDTAIQ 712
R *+Q AIQ
Sbjct: 819 HRR*DQAAAIQ 851
Score = 27.2 bits (53), Expect(2) = 6e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +2
Query: 886 CCRKM*CNLLSYHTQFYVSVEW*RLSFLGGSTRTRLMVCTTY 1011
C RKM N S+ Q + V *RL++ + M+ TTY
Sbjct: 1919 CDRKMCYNPSSFRAQSFALVV**RLNYWAEYKNRKQMIGTTY 2044
Score = 42.3 bits (86), Expect = 0.008
Identities = 30/98 (30%), Positives = 42/98 (42%)
Frame = -2 / -2
Query: 729 YVGKML*MAVS*FHQRDTAPTEAYISGILAQQDLCGHRSTNKTVSSRHDQPVQGYFLWPL 550
Y L*MA +* H+R T + A S L +D G R T++ + D+ V W
Sbjct: 868 YPDLYL*MAAA*SHRRCTYHS*ACTSRSLVCRDRRGRRWTSRRGGA*PDRVV*ACSRWSR 689
Query: 549 QGNDQCWMHLRSD*CNPWGCTAREDHG*DAYTPCDRSR 436
+G+ +CW C+PW R * C SR
Sbjct: 688 RGSCRCWRRRCIAGCSPWRGCWRRGRR*GRSRSCSPSR 575
>LOC_Os03g64360:12003.t05646:unspliced-genomic F-box domain containing protein, expressed|
Length = 2794
Score = 80.3 bits (169), Expect(9) = 1e-86
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +3
Query: 597 RPSYWSSGGHKDPAVPECLIYRLQSELCLVDEIKIRPFK 713
RPSYWSS GH DPAVPECL YRL+S+LCLV +I I+PF+
Sbjct: 705 RPSYWSSAGHFDPAVPECLFYRLRSDLCLVQQINIQPFR 821
Score = 73.9 bits (155), Expect(9) = 1e-86
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3 / +1
Query: 168 EEGRGLDFLESLGPDNSATVFSLLDDPADLARATAVSRSWRRF 296
EE DFLE +GPD SA VF+ LD PADLARA+AVSRSWRRF
Sbjct: 127 EEEARFDFLEWIGPDTSAAVFTFLDHPADLARASAVSRSWRRF 255
Score = 73.5 bits (154), Expect(9) = 1e-86
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3 / +3
Query: 885 MLQENVMQSFKLPHPVLCIGGVVKIELLGRVHKDTVDGLYYI 1010
+ QE+V+QSFKLP VLCIGGVVKIE LGRV K +D LYYI
Sbjct: 2052 IFQESVLQSFKLPRAVLCIGGVVKIEFLGRVQKQEMDDLYYI 2177
Score = 55.6 bits (115), Expect(9) = 1e-86
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 492 NPKDCINHCVGASSTDHFPEEAIGNTLEPVD 584
+P+DCI C+GAS+TD+FPEE I NTL P D
Sbjct: 597 DPQDCIIRCIGASTTDNFPEETIQNTLVPTD 689
Score = 51.9 bits (107), Expect(9) = 1e-86
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +3 / +3
Query: 984 DTVDGLYYICVSHVQIVGKPLSQDFGVAPSKNDVVLSYYLDYHR 1115
D V + +SHVQIVG PL ++ GV P KN VVL YY D R
Sbjct: 2235 DNVAHVLIFSISHVQIVGIPLPRELGVDPYKNGVVLKYYPDTRR 2366
Score = 47.3 bits (97), Expect(9) = 1e-86
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3 / +3
Query: 714 AFFRRNHPIYSAKHIRFHMGYVKPPLWSETHVHVQTDDGELIDDS 848
AFF+ PIYSAK++RF MGY K PL S+ V + DD+
Sbjct: 897 AFFQYGDPIYSAKYVRFQMGYPKTPLPSQLLVSHDNEGQLAADDN 1031
Score = 40.9 bits (83), Expect(9) = 1e-86
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3 / +3
Query: 297 VIANQFSKLLCLRVYPEVSNFTRV 368
V+ N FSK+ CLR+ PE SNFTR+
Sbjct: 432 VVRNGFSKIQCLRLCPEASNFTRI 503
Score = 39.6 bits (80), Expect(9) = 1e-86
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 842 **QLYLDVHISGISNVAGKC 901
**QLYLDVHIS ISN AG+C
Sbjct: 1022 **QLYLDVHISTISNAAGQC 1081
Score = 26.3 bits (51), Expect(9) = 1e-86
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 447 HRVYMHLSHGLL 482
HR YMHLS+ LL
Sbjct: 555 HRAYMHLSYALL 590
Score = 62.0 bits (129), Expect(9) = 1e-55
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -1 / -1
Query: 1012 HM*YRPSTVSLWTLPRSSIFTTPPIHRTGCGSLKDCITFSCNI 884
HM*YR S TLPR+SIFTTPP+HRT GSLKD T S N+
Sbjct: 2179 HM*YRSSISCF*TLPRNSIFTTPPMHRTARGSLKD*RTLSWNM 2051
Score = 59.7 bits (124), Expect(9) = 1e-55
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = -1 / -1
Query: 712 LNGRILISSTRHSSD*SLYIRHSGTAGSLWPPLDQ*DGLL 593
LNG +LI TRH S+ SL RHSGTAGS WP LDQ*+GL+
Sbjct: 820 LNGCMLIC*TRHRSERSL*KRHSGTAGSKWPALDQ*EGLI 701
Score = 45.1 bits (92), Expect(9) = 1e-55
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 598 LLSSRSTGSRVFPMASSGK*SVLDAPTQ*LMQSLG 494
+++++S G+RVF M SSGK SV++AP Q +MQS G
Sbjct: 703 IMATQSVGTRVFCMVSSGKLSVVEAPMQRMMQSWG 599
Score = 43.7 bits (89), Expect(9) = 1e-55
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 1093 LRTTSFLLGATPKSCDNGFPTIWT*D 1016
LRTT FL G+TP S +G PTIWT*D
Sbjct: 2344 LRTTPFL*GSTPSSRGSGIPTIWT*D 2267
Score = 43.2 bits (88), Expect(9) = 1e-55
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2 / -2
Query: 900 HFPATLEIPEMCTSRYNCYHQSAPHHQFE 814
H PA LEI EMCTSRY+C+ Q H E
Sbjct: 1080 H*PAALEIVEMCTSRYSCHQQPTGLHYHE 994
Score = 38.2 bits (77), Expect(9) = 1e-55
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -1 / -3
Query: 295 NRRHERETXXXXXXXXXXXXRLKTVAELSGPRLSRKSNPRPSS 167
NRR ERET ++KT AE+SGP SRKS SS
Sbjct: 254 NRRQERETAEARARSAGWSRKVKTAAEVSGPIHSRKSKRASSS 126
Score = 35.0 bits (70), Expect(9) = 1e-55
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 796 DQRGGFT*PMWNRICFAEYIG 734
D RG F *P+W R FAEYIG
Sbjct: 979 DGRGVFG*PIWKRTYFAEYIG 917
Score = 30.4 bits (60), Expect(9) = 1e-55
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3 / -3
Query: 368 NTGEVGNLRINPQAQELAELICNN 297
NTGEV + R QA +LAE I NN
Sbjct: 503 NTGEV*SFRAKAQALDLAEAIPNN 432
Score = 24.4 bits (47), Expect(9) = 1e-55
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 483 REDHG*DAYTPC 448
RE H *DA TPC
Sbjct: 591 REGHS*DACTPC 556
Score = 53.8 bits (111), Expect(7) = 5e-39
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2 / +2
Query: 884 NVAGKCDAIF*ATTPSSMYRWSGKD*ASWEGPQGHG*WSVLHM 1012
++ GKC ++F*A+T SSM+RWS +D* SW G + S+LHM
Sbjct: 2051 HIPGKCPSVF*ASTRSSMHRWSCED*VSW*GSETGNG*SILHM 2179
Score = 51.9 bits (107), Expect(7) = 5e-39
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 822 DDGELIDDSNYIWTYTSPEFPMLQENVMQS 911
++G+L D NYIWTYTSP+FPMLQ +V +
Sbjct: 1002 NEGQLAADDNYIWTYTSPQFPMLQVSVFHA 1091
Score = 50.6 bits (104), Expect(7) = 5e-39
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 593 EETVLLVERWPQRSCCARMPDI*ASVGAVSR**NQDTAIQ 712
+E +LLV+R P RSCCARMP + AS+ ++ R NQ TAIQ
Sbjct: 701 DEALLLVQRRPLRSCCARMPLLQASLRSMPRSTNQHTAIQ 820
Score = 39.1 bits (79), Expect(7) = 5e-39
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / +2
Query: 494 PQGLHQSLRRCIQH*SFP*RGHRKYP 571
P GLH L RC+ H FP* H K+P
Sbjct: 599 PPGLHHPLHRCLHHRQFP*GDHTKHP 676
Score = 37.7 bits (76), Expect(7) = 5e-39
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2 / +2
Query: 1016 VSCPNSGEAIVTRFWGRS*QK*CSPQLLSGLPQI 1117
+SCPNSG++ RS Q+ C PQ+LS QI
Sbjct: 2267 ISCPNSGDSTAAGTRSRSLQERCGPQVLSRYSQI 2368
Score = 28.1 bits (55), Expect(7) = 5e-39
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2 / +2
Query: 713 SIFPT*SSDILSKTYPIPHGLCKATPLV*NTC 808
S P S+IL K P+P GL K T + TC
Sbjct: 896 SFLPVW*SNILRKICPLPDGLPKDTSTISITC 991
Score = 27.2 bits (53), Expect(7) = 5e-39
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 298 LLQISSASSCACGFIRRFPTSPVL 369
L ++SA S AC F + TSPVL
Sbjct: 433 LFGMASARSNACAFALKLQTSPVL 504
Score = 50.1 bits (103), Expect(8) = 2e-34
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = -3 / -3
Query: 1010 YVVQTINRVLVDPPKKLNLYHSTDT*NWVW*LKRLHHIFLQH 885
YV+ I+ + ++P KKLNL++STD *N W LKRL FL++
Sbjct: 2177 YVI*IIHFLFLNPTKKLNLHNSTDA*NCAWKLKRLKDTFLEY 2052
Score = 48.7 bits (100), Expect(8) = 2e-34
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -3 / -3
Query: 710 EWPYLDFINETQLRLKPIYQAFWHSRIFVATARPIR 603
EW Y+D +NE + KP+ +AF HSRI VA A PIR
Sbjct: 818 EWLYVDLLNEA*IGAKPVKEAFGHSRIEVAGAGPIR 711
Score = 43.2 bits (88), Expect(8) = 2e-34
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 893 LQHWKFRRCVRPDIIAIINQLPII 822
LQHWK RCVRPDI+ I +QL I
Sbjct: 1073 LQHWKLWRCVRPDIVVISSQLAFI 1002
Score = 40.5 bits (82), Expect(8) = 2e-34
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3 / -3
Query: 584 INRFKGISYGLFREMISAGCTYAVIDAILGVVRRE 480
I KG+ YGL RE++ G T A DA+LGV++ +
Sbjct: 689 IGGHKGVLYGLLREIVGGGGTDAADDAVLGVIQEK 585
Score = 30.4 bits (60), Expect(8) = 2e-34
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / -2
Query: 1116 ICGNPDSN*GLHHFC*ERPQNLVTMASPLFGHE 1018
IC DS *G H C + + SPLFGHE
Sbjct: 2367 ICEYLDST*GPHRSCKDLLLVPAAVESPLFGHE 2269
Score = 27.2 bits (53), Expect(8) = 2e-34
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 782 LYIAHVESDMFC*VY 738
L++ H+E+D+FC VY
Sbjct: 965 LWVTHLEADIFCGVY 921
Score = 26.3 bits (51), Expect(8) = 2e-34
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1 / -1
Query: 364 RVKLETSG*TRRHRSLLN*FAITNRRHER 278
RVK E SG RRH LL F T + +
Sbjct: 499 RVKFEASGQRRRHWILLKPFRTTEGKDSK 413
Score = 23.5 bits (45), Expect(8) = 2e-34
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 491 VRREKTMAKMHIHPVI 444
V +EK +A+MH+ PV+
Sbjct: 599 VIQEKGIAEMHVRPVL 552
Score = 49.2 bits (101), Expect(6) = 9e-23
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1 / +1
Query: 868 HLRNFQCCRKM*CNLLSYHTQFYVSVEW*RLSFLGGSTRTRLMVCTTY 1011
++ N RK+ +LLS+H QFY SVE *RLSFL G + M+ TY
Sbjct: 2035 NVNNVPYSRKVSFSLLSFHAQFYASVEL*RLSFLVGFRNRKWMIYITY 2178
Score = 43.2 bits (88), Expect(6) = 9e-23
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 604 LIGRAVATKILLCQNA*YIGFSRSCVSLMKSRYGHSK 714
LIG A AT ILLC NA + GF+ S KS Y HS+
Sbjct: 712 LIGPAPATSILLCPNASFTGFAPIYASFNKSTYSHSE 822
Score = 33.1 bits (66), Expect(6) = 9e-23
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1 / +1
Query: 721 SDVIIRYTQQNISDSTWAM*SHPSGLKHMYMFKLMMGS*LMIAI 852
S ++I+YT QN+S S W H L ++Y+ + LM I
Sbjct: 904 SSMVIQYTPQNMSASRWVTQRHLYHLNYLYLMIMKASWLLMTTI 1035
Score = 31.3 bits (62), Expect(6) = 9e-23
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1 / +1
Query: 1018 LMSK*WGSHCHKILGSLLAKMM*SSVTIWITTD 1116
LMSK*WG HC +L + + SS TI I D
Sbjct: 2269 LMSK*WGFHCRGN*E*ILTRTVWSSSTIQILAD 2367
Score = 29.9 bits (59), Expect(6) = 9e-23
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1 / +1
Query: 493 TPRIASITA*VHPALIISLKRP*EIPL 573
TPR AS A V P ISL+RP + PL
Sbjct: 598 TPRTASSAASVPPPPTISLRRPYKTPL 678
Score = 26.3 bits (51), Expect(6) = 9e-23
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 311 VQQAPVPAGLSGGFQLHP 364
+QQ P+PA L F+LHP
Sbjct: 446 LQQDPMPAPLP*SFKLHP 499
Score = 45.1 bits (92), Expect(5) = 2e-19
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = -2 / -2
Query: 1011 ICSTDHQPCPCGPSQEAQSLPLHRYIELGVVA*KIASHFP 892
IC+ DH P QE QS LHR IEL V A*K HFP
Sbjct: 2178 ICNIDHPFPVSEPYQETQSSQLHRCIELRVEA*KTEGHFP 2059
Score = 40.5 bits (82), Expect(5) = 2e-19
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -2 / -2
Query: 714 L*MAVS*FHQRDTAPTEAYISGILAQQDLCGHRSTNKTVSS 592
L*MAV *F +R +EA GI AQQD G R TNK SS
Sbjct: 822 L*MAVC*FVERGIDRSEACKRGIRAQQDRSGRRWTNKRASS 700
Score = 36.8 bits (74), Expect(5) = 2e-19
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 573 QGYFLWPLQGNDQCWMHLRSD*CNPWG 493
QG F+W QGN + W H S *C+P G
Sbjct: 678 QGCFVWSPQGNCRWWRHRCSG*CSPGG 598
Score = 31.8 bits (63), Expect(5) = 2e-19
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 901 TFSCNIGNSGDVYVQ 857
T +C+IGN GDVYVQ
Sbjct: 1081 TLTCSIGNCGDVYVQ 1037
Score = 29.0 bits (57), Expect(5) = 2e-19
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 1046 QWLPHYLDMRH 1014
QW PHYLDMR+
Sbjct: 2297 QWNPHYLDMRY 2265
Score = 43.7 bits (89), Expect = 0.003
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 820 LMMGS*LMIAIISGRTHLRNFQCCRKM 900
+M S L++ ISGRTHL NFQCCR +
Sbjct: 1000 IMKASWLLMTTISGRTHLHNFQCCRSV 1080
>LOC_Os07g14514:12007.t01315:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
Length = 14198
Score = 24.9 bits (48), Expect(2) = 9.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 205 PRLSRKSNPRPSSH 164
PR+ R ++P PSSH
Sbjct: 4157 PRVHRSNSPSPSSH 4198
Score = 24.0 bits (46), Expect(2) = 9.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / +3
Query: 64 SRGEGQKRLEQGASRSVP 11
S GEG R+ G RS+P
Sbjct: 4323 SSGEGDHRVATGIRRSIP 4376
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 642,363,773
Number of extensions: 11096706
Number of successful extensions: 42530
Number of sequences better than 10.0: 26
Length of query: 486
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 435
Effective length of database: 52,743,708
Effective search space: 22943512980
Effective search space used: 22943512980
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)