ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf124l01 |
|---|---|
| Clone Library Name | barley_pub |
>AK121016:Os07g0446600 | Length = 100 Score = 64.7 bits (156), Expect = 5e-11 Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 4/46 (8%) Frame = +1 Query: 235 GRMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLM----LCLLWYIL 360 G MNWV RKIHLYNV +GLYMLDWWER LF+ L CLL I+ Sbjct: 2 GEMNWVSRKIHLYNVTMGLYMLDWWERCLFSILFHLTPYCLLQIII 47
>Os07g0446900:Os07g0446900 | Length = 75 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 6/68 (8%) Frame = +1 Query: 235 GRMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLM-LCLLWYIL----RYLTGFFQSNLET 399 G MNWV RKIHLYNV +GLYMLD +M L LLW++ R+ + F S+L+ Sbjct: 2 GEMNWVSRKIHLYNVTMGLYMLDCRSSLTGEDMMVLILLWFVCFNGSRFASDVFDSHLKA 61 Query: 400 -ILHGANY 420 I+ G NY Sbjct: 62 RIIPGGNY 69
>AK067493:Os01g0332800 | Length = 480 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Frame = -1 Query: 583 ADIQYK--KRLQTQQHIN-RSFLVSQSETNQNIDYRG 482 AD+ Y+ K ++T QHIN + F+V +ET+ DY+G Sbjct: 199 ADVVYERNKHVETNQHINLKGFIVGNAETDDYYDYKG 235
>AK061997:Os01g0332800 | Length = 461 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Frame = -1 Query: 583 ADIQYK--KRLQTQQHIN-RSFLVSQSETNQNIDYRG 482 AD+ Y+ K ++T QHIN + F+V +ET+ DY+G Sbjct: 180 ADVVYERNKHVETNQHINLKGFIVGNAETDDYYDYKG 216
>Os01g0718900:Os01g0718900 | Length = 351 Score = 31.2 bits (69), Expect = 0.63 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Frame = +3 Query: 60 SEYSFRTKPTPSTKRRSSERSA--------PIPQDTTPFFLSSDNPTPRRLFPDLSEGS 212 S S T P+P +KRR ++R A P P T ++ PTP R P+ SEGS Sbjct: 48 SPSSSGTSPSPRSKRRRTDRYAQGFEFAPRPAPATAT---ATAPAPTPARGTPEWSEGS 103
>AK071065:Os04g0469500 | Length = 487 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1 Query: 250 PSSSSPKRDPTRADPSLRSGNKRRGVGLSDER-KKGVVSCG 131 PSS+SP R R+ P+ R+G R GV + R + VV+CG Sbjct: 88 PSSTSPPRRRPRSSPTARAG-PRAGVAVDPARARAAVVTCG 127
>Os06g0197300:Os06g0197300 | Length = 334 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +3 Query: 9 HGKKFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRL 188 H K+ ++ + R F T P P+ + RSA +T SS PT R L Sbjct: 117 HSKRNQSQRKRESREERERMDFSTPPPPAATATRTGRSATATASSTSAAGSSTRPTSRTL 176 Query: 189 FPDL 200 P L Sbjct: 177 LPPL 180
>Os06g0197000:Os06g0197000 | Length = 334 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +3 Query: 9 HGKKFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRL 188 H K+ ++ + R F T P P+ + RSA +T SS PT R L Sbjct: 117 HSKRNQSQRKRESREERERMDFSTPPPPAATATRTGRSATATASSTSAAGSSTRPTSRTL 176 Query: 189 FPDL 200 P L Sbjct: 177 LPPL 180
>AK100846:Os01g0521500 | Length = 603 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 247 SSSSPKRDPTRADPSLRSGNKRRGVGLSDERKK 149 S+SSP R P R S SG+KRR S R + Sbjct: 43 SASSPSRSPDRRSRSRSSGSKRRKASSSSRRHR 75
>Os02g0506400:Os02g0506400 | Length = 379 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 519 ETRKERFMCCCVCSRFLYCMSA 584 ETRK F C VCS +YC A Sbjct: 313 ETRKHEFRRCSVCSGVIYCSRA 334
>AK073497:Os05g0153000 | Length = 849 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSA 215 P+PS + RSS S+P ++TP + RRLFP SA Sbjct: 801 PSPSPRSRSSASSSPASWNSTP------STVARRLFPPSLHASA 838
>AK072095:Os05g0153000 | Length = 849 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSA 215 P+PS + RSS S+P ++TP + RRLFP SA Sbjct: 801 PSPSPRSRSSASSSPASWNSTP------STVARRLFPPSLHASA 838
>AY341828:Os01g0131600 | Length = 338 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQD 263 PTP+ SS +AP + L + P P+ P L E +A + +E D Sbjct: 183 PTPTASSSSSTSAAPFAHPSPSSVLEATKPAPKPESPPLPEQAATPLLVEATNETAELPD 242 Query: 264 PP 269 P Sbjct: 243 DP 244
>AK119645:Os01g0131600 | Length = 338 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQD 263 PTP+ SS +AP + L + P P+ P L E +A + +E D Sbjct: 183 PTPTASSSSSTSAAPFAHPSPSSVLEATKPAPKPESPPLPEQAATPLLVEATNETAELPD 242 Query: 264 PP 269 P Sbjct: 243 DP 244
>AK108068:Os02g0454300 | Length = 106 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = +3 Query: 3 AVH-GKKFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTP 179 AVH +R P++S H + R + ++P+P+T+R SS+ A P F++ NP Sbjct: 24 AVHPSPTYRRPSTSGHRRSRC-FRHPSRPSPATRRTSSD--AQEPGALFSFWVRRQNP-- 78 Query: 180 RRLFPDLSEGSARVG 224 R P S S G Sbjct: 79 -RRSPPTSTSSPPAG 92
>AK102277:Os01g0131600 | Length = 338 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQD 263 PTP+ SS +AP + L + P P+ P L E +A + +E D Sbjct: 183 PTPTASSSSSTSAAPFAHPSPSSVLEATKPAPKPESPPLPEQAATPLLVEATNETAELPD 242 Query: 264 PP 269 P Sbjct: 243 DP 244
>AK101133:Os01g0131600 | Length = 338 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQD 263 PTP+ SS +AP + L + P P+ P L E +A + +E D Sbjct: 183 PTPTASSSSSTSAAPFAHPSPSSVLEATKPAPKPESPPLPEQAATPLLVEATNETAELPD 242 Query: 264 PP 269 P Sbjct: 243 DP 244
>AK062063:Os01g0131600 | Length = 309 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQD 263 PTP+ SS +AP + L + P P+ P L E +A + +E D Sbjct: 154 PTPTASSSSSTSAAPFAHPSPSSVLEATKPAPKPESPPLPEQAATPLLVEATNETAELPD 213 Query: 264 PP 269 P Sbjct: 214 DP 215
>AK108900:Os10g0531300 | Length = 211 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -1 Query: 238 SPKRDPTRADPSLRSG----NKRRG--VGLSDERKKGVVSCGIGADLSEDLRLVDGVGFV 77 +P++DP P L R G VG+ + G V G+ L +DLRLVDG V Sbjct: 121 APEQDPQPRQPHLVVDVCRPEPRHGALVGVGGQHGGGAVGPGLVDVLQDDLRLVDGAAGV 180 Query: 76 RK 71 + Sbjct: 181 EE 182
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 Query: 82 SRRHRPSGDPLKDPRRSHKTPRPSSSRQ 165 S RH PS PL+ P R TP PS S+Q Sbjct: 730 SPRHPPSPPPLRSPPR-QPTPPPSPSQQ 756
>Os04g0120000:Os04g0120000 | Length = 2422 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 Query: 82 SRRHRPSGDPLKDPRRSHKTPRPSSSRQ 165 S RH PS PL+ P R TP PS S+Q Sbjct: 719 SPRHPPSPPPLRSPPR-QPTPPPSPSQQ 745
>AK065478:Os06g0154200 | Length = 371 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Frame = -2 Query: 351 PEKAKH*RIEEVALPPIEHVEADVDIVEVDLAPDPVHPPRRETRR---GQIPRSDPETSG 181 P A+ LPP A LAP P HPPRR R G + R+ Sbjct: 159 PHHARQPHPALAGLPPPRQARA--------LAPAPAHPPRRRGSRAAAGDLRRAPGARPV 210 Query: 180 EVLDYLTRGRR 148 VL L RGRR Sbjct: 211 GVL-LLDRGRR 220
>Os05g0141000:Os05g0141000 | Length = 1201 Score = 25.4 bits (54), Expect(2) = 6.1 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -1 Query: 244 SSSPKRDPTRADPSLRSGNKRR 179 S SP DP A P L SG +RR Sbjct: 1035 SLSPLLDPPLAPPPLESGGRRR 1056 Score = 20.8 bits (42), Expect(2) = 6.1 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 Query: 110 GSPLGRWRRLCS 75 G P+ R RRLCS Sbjct: 1058 GCPVARRRRLCS 1069
>AK122118:Os01g0101600 | Length = 978 Score = 27.7 bits (60), Expect = 6.9 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 19/91 (20%) Frame = +3 Query: 12 GKKFRTPTSSTHVKFRSEYSFRTKPTP--STKRRSSERSAPIPQDTTPFFLS-------- 161 G++ R+P+ S H K+ S+ S+R + RR S+RS ++ S Sbjct: 553 GRRSRSPSRSYHSKYGSDRSYRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHK 612 Query: 162 ----SDNPTPRR-----LFPDLSEGSARVGS 227 SD+ +P+R L P S SAR GS Sbjct: 613 KSSRSDSRSPKRHREESLSPSKSRRSARAGS 643
>AK102577:Os06g0670100 | Length = 413 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = +3 Query: 150 FFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELG 251 FFLS P PR D S GS R SL +D LG Sbjct: 23 FFLSFFGPHPRDRDRDDSPGSGRRDSLAHKDRLG 56
>AK099952:Os01g0101600 | Length = 978 Score = 27.7 bits (60), Expect = 6.9 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 19/91 (20%) Frame = +3 Query: 12 GKKFRTPTSSTHVKFRSEYSFRTKPTP--STKRRSSERSAPIPQDTTPFFLS-------- 161 G++ R+P+ S H K+ S+ S+R + RR S+RS ++ S Sbjct: 553 GRRSRSPSRSYHSKYGSDRSYRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHK 612 Query: 162 ----SDNPTPRR-----LFPDLSEGSARVGS 227 SD+ +P+R L P S SAR GS Sbjct: 613 KSSRSDSRSPKRHREESLSPSKSRRSARAGS 643
>AK072876:Os11g0485500 | Length = 104 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +3 Query: 99 KRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQDP-PLQ 275 +RR S AP P T L T R++ G + GE+EL P P + Sbjct: 21 RRRPSSTGAPSPSITATEVLPPHQATQHRIWEAQPPAGPWEGEVEGEEELAAPLSPLPSR 80 Query: 276 CQHRPLHARLV 308 C+ R + R++ Sbjct: 81 CR-RGVRRRII 90
>AK063171:Os01g0622800 | Length = 129 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +3 Query: 75 RTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGS 227 R P P + R R PQ ++P SS +P PRR +ARVGS Sbjct: 29 RRLPPPLSARGIRRRQPGPPQRSSPCVASSSSPYPRRC---RLLANARVGS 76
>Os02g0748800:Os02g0748800 | Length = 458 Score = 27.3 bits (59), Expect = 9.1 Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 7/71 (9%) Frame = -3 Query: 239 LPEERPDAGR-------SLAQIRKQAARCWII*REEEGRGVLWDRRGSFRGSPLGRWRRL 81 LP PD+ R SL IRK CW +G GVL D R L Sbjct: 297 LPPPPPDSDRKVVLYLTSLRGIRKTYEDCWATKSILQGYGVLVDERD------------L 344 Query: 80 CSEAVFRSELH 48 A F+ ELH Sbjct: 345 SMHAGFKEELH 355
>Os01g0225300:Os01g0225300 | Length = 530 Score = 27.3 bits (59), Expect = 9.1 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 12/97 (12%) Frame = +3 Query: 12 GKKFRTPTSSTHVK----FRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFL---SSDN 170 G+ T TSS+ F S F P+PS S S P P P L SS + Sbjct: 4 GRSTTTTTSSSASNPFHAFASTLPFLPSPSPSPTSASPSPSPPAPHLAVPLILPITSSSS 63 Query: 171 PTPRRLFPDLSEG-----SARVGSLFGEDELGRAQDP 266 + P+ + G +A G G LG+ P Sbjct: 64 ASAAAASPESNRGARMAAAASGGKAGGGGGLGKGGGP 100
>AK120760:Os01g0930200 | Length = 172 Score = 27.3 bits (59), Expect = 9.1 Identities = 30/107 (28%), Positives = 38/107 (35%), Gaps = 5/107 (4%) Frame = +3 Query: 120 SAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSARVGSLFGEDELGRAQDPPLQCQH----- 284 SA + PF LSS+N +R E +FG RA +P + H Sbjct: 43 SADLILGPPPFLLSSNNTNKQREGKSKEEEEEGRWEMFGGSPPARADNPLVHDPHFLLNQ 102 Query: 285 RPLHARLVGALPLQYVNALPSLVHSTVSHWVLSK*SGDHPTWRELSS 425 RP HA A P L H + H G HP + SS Sbjct: 103 RP-HAAAAAAAP-----ELSIFDHRSTHH-------GHHPAYSSSSS 136
>AK107635:Os09g0572500 | Length = 541 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 24 RTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIP-QDTTPFFLSSDNPTP 179 R+ TSST + S + P+PST S S+P P +P S +P P Sbjct: 341 RSSTSSTISSSSASSSPTSSPSPSTASSSPPASSPAPTTSASPSTSPSTSPPP 393
>AK072879:Os03g0283800 | Length = 883 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 250 PSSSSPKRDPTRADPSLRSGNKRRGVGLSDERK 152 P S P +DP + P+ R G RG+G ++ K Sbjct: 840 PQSGKPNQDPNQDAPNRRLGLLSRGLGWLEKSK 872
>AK071384:Os05g0306000 | Length = 439 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%) Frame = +2 Query: 341 AFSGTFYGISLGSFKVIWRPSYMA---RTIFYKV 433 A G F +S GS+K++W SY + +++ YKV Sbjct: 390 ADQGNFCTVSAGSYKLVWDNSYSSFFKKSLRYKV 423 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,946,054 Number of extensions: 504275 Number of successful extensions: 1953 Number of sequences better than 10.0: 34 Number of HSP's gapped: 1951 Number of HSP's successfully gapped: 35 Length of query: 218 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 121 Effective length of database: 11,515,878 Effective search space: 1393421238 Effective search space used: 1393421238 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
