ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf124l01 |
|---|---|
| Clone Library Name | barley_pub |
>Q8TAX7:MUC7_HUMAN Mucin-7 precursor - Homo sapiens (Human)| Length = 377 Score = 34.3 bits (77), Expect = 0.41 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 84 PTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPDLSEGSA 215 PTPS + S+P PQ+TT +++ N +P L PD SE SA Sbjct: 285 PTPSATTPAPP-SSPAPQETTAAPITTPNSSPTTLAPDTSETSA 327
>Q6G2Z4:SYA_BARHE Alanyl-tRNA synthetase - Bartonella henselae (Rochalimaea henselae)| Length = 887 Score = 34.3 bits (77), Expect = 0.41 Identities = 14/39 (35%), Positives = 27/39 (69%) Frame = -1 Query: 169 LSDERKKGVVSCGIGADLSEDLRLVDGVGFVRKLYSDLN 53 L+DERKK V+S GI ED+ +++G+ F+ ++ +++ Sbjct: 756 LNDERKKSVLSGGIVKSDQEDITIINGISFMGRVVKNIS 794
>Q12501:YO22B_YEAST Transposon Ty2-OR2 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 33.1 bits (74), Expect = 0.91 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + +++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSDSTTPIISIETKAACDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q12113:YO21B_YEAST Transposon Ty2-OR1 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 33.1 bits (74), Expect = 0.91 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + +++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAACDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q12472:YD21B_YEAST Transposon Ty2-DR1 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 33.1 bits (74), Expect = 0.91 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + +++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAACDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q6DFT6:CN147_XENTR UPF0445 protein C14orf147 homolog - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 80 Score = 33.1 bits (74), Expect = 0.92 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +1 Query: 214 PASGLSSG--RMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQS 387 P S LS M+W+ + Y + LYML+ WER +FN++++ ++ L F Sbjct: 11 PRSSLSRAWNHMSWL---YYQYLLVTALYMLEPWERTIFNSMLVSIVGMALYTGYIFMPQ 67 Query: 388 NLETILH 408 ++ ILH Sbjct: 68 HILAILH 74
>Q12491:YB21B_YEAST Transposon Ty2-B Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.3 bits (72), Expect = 1.6 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + +++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSPDSDSTTPIISIETKAACDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>P0C2J5:YL22B_YEAST Transposon Ty2-LR2 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1598 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>P0C2J3:YL21B_YEAST Transposon Ty2-LR1 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q12337:YG21B_YEAST Transposon Ty2-GR1 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q12503:YF21B_YEAST Transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein - Saccharomyces| cerevisiae (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q07791:YD23B_YEAST Transposon Ty2-DR3 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q03494:YD22B_YEAST Transposon Ty2-DR2 Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>P25384:YC21B_YEAST Transposon Ty2-C Gag-Pol polyprotein - Saccharomyces cerevisiae| (Baker's yeast) Length = 1770 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 18 KFRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLFPD 197 K+RT S+ + RS S T P S + ++ + P P + SSD+ TP + PD Sbjct: 1073 KYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATP-NIMPD 1131 Query: 198 LSEGSARVGSLFGE 239 S + S+ + Sbjct: 1132 KSSKNVTADSILDD 1145
>Q66J44:CN47A_XENLA UPF0445 protein C14orf147 homolog A - Xenopus laevis (African| clawed frog) Length = 80 Score = 32.0 bits (71), Expect = 2.1 Identities = 18/62 (29%), Positives = 33/62 (53%) Frame = +1 Query: 223 GLSSGRMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQSNLETI 402 G + M+W+ + Y + LYML+ WER +FN++++ ++ L F ++ I Sbjct: 16 GRAWSHMSWL---YYQYLLVTALYMLEPWERTVFNSMLVSIVGMALYTGYIFMPQHILAI 72 Query: 403 LH 408 LH Sbjct: 73 LH 74
>Q5FVR0:TIMD2_RAT T-cell immunoglobulin and mucin domain-containing protein 2| precursor - Rattus norvegicus (Rat) Length = 349 Score = 31.6 bits (70), Expect = 2.7 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 4/132 (3%) Frame = +3 Query: 12 GKKFRTPTSSTHVKFRSEYSFRTKPTP-STKRRSSERSAPIPQDTTPFFLSSDNPTPRRL 188 G+ T STHV + S T PTP T+ SE + P TT + + TP Sbjct: 186 GRPTTISTRSTHVPTSTRVSTSTPPTPEQTQTHRSEATTYYPDQTTAEVTEAPSHTP--- 242 Query: 189 FPDLSEGSARVGSLFGEDELGRAQDPPLQCQHRPLHARLVGALPLQYVNALPSLVHSTVS 368 D + + + D PP + Q P VG + + L L+ STV+ Sbjct: 243 -TDWNNTATSSDDSWNSD---TEAIPPQKLQRNPTKGFYVG---MSFAALLLLLLASTVA 295 Query: 369 ---HWVLSK*SG 395 + V+ K SG Sbjct: 296 ITRYMVMRKNSG 307
>Q9UG22:GIMA2_HUMAN GTPase IMAP family member 2 - Homo sapiens (Human)| Length = 337 Score = 31.6 bits (70), Expect = 2.7 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = +2 Query: 527 KGTVYVLLCLQPFF---VLYVCIVHGYCNILMSLILS 628 K + VL C+Q F +L++CI+H CN+ L+ S Sbjct: 268 KTQLCVLFCIQLFLRLIILWLCILHSMCNLFCCLLFS 304
>Q969W0:CN147_HUMAN UPF0445 protein C14orf147 - Homo sapiens (Human)| Length = 68 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 238 RMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQSNLETILH 408 +M+W + Y + LYML+ WER +FN++++ ++ L F ++ ILH Sbjct: 9 QMSWF---YYQYLLVTALYMLEPWERTVFNSMLVSIVGMALYTGYVFMPQHIMAILH 62
>Q5E978:CN147_BOVIN UPF0445 protein C14orf147 homolog - Bos taurus (Bovine)| Length = 68 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 238 RMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQSNLETILH 408 +M+W + Y + LYML+ WER +FN++++ ++ L F ++ ILH Sbjct: 9 QMSWF---YYQYLLVTALYMLEPWERTVFNSMLVSIVGMALYTGYVFMPQHIMAILH 62
>Q6PAJ1:BCR_MOUSE Breakpoint cluster region protein - Mus musculus (Mouse)| Length = 1270 Score = 31.2 bits (69), Expect = 3.5 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 36 SSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPR 182 +S+ F S S R P+P+T R ++S Q++ F SS PTP+ Sbjct: 341 TSSEEDFSSGQSSRVSPSPTTYRMFRDKSRSPSQNSQQSFDSSSPPTPQ 389
>P11274:BCR_HUMAN Breakpoint cluster region protein - Homo sapiens (Human)| Length = 1271 Score = 31.2 bits (69), Expect = 3.5 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 36 SSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPR 182 +S+ F S S R P+P+T R ++S Q++ F SS PTP+ Sbjct: 339 TSSEEDFSSGQSSRVSPSPTTYRMFRDKSRSPSQNSQQSFDSSSPPTPQ 387
>Q6GPZ5:CN47B_XENLA UPF0445 protein C14orf147 homolog B - Xenopus laevis (African| clawed frog) Length = 80 Score = 31.2 bits (69), Expect = 3.5 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +1 Query: 193 RI*ARDLPASGLSSGRM-NWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYL 369 ++ D+ S GR N V + Y + LYML+ WER +FN++++ ++ L Sbjct: 2 KVSCEDVNGPRSSLGRAWNHVSWLYYQYLLVTALYMLEPWERTVFNSMLVSIVGMALYTG 61 Query: 370 TGFFQSNLETILH 408 F ++ ILH Sbjct: 62 YIFMPQHILAILH 74
>Q4G019:CN147_RAT UPF0445 protein C14orf147 homolog - Rattus norvegicus (Rat)| Length = 68 Score = 31.2 bits (69), Expect = 3.5 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 238 RMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQSNLETILH 408 +M+W + Y + LYML+ WER +FN++++ ++ L F ++ ILH Sbjct: 9 QMSWF---YYQYLLVTALYMLEPWERTVFNSMLVSVVGMALYTGYVFMPQHIMAILH 62
>Q8R207:CN147_MOUSE UPF0445 protein C14orf147 homolog - Mus musculus (Mouse)| Length = 68 Score = 31.2 bits (69), Expect = 3.5 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 238 RMNWVGRKIHLYNVNIGLYMLDWWERYLFNTLMLCLLWYILRYLTGFFQSNLETILH 408 +M+W + Y + LYML+ WER +FN++++ ++ L F ++ ILH Sbjct: 9 QMSWF---YYQYLLVTALYMLEPWERTVFNSMLVSVVGMALYTGYVFMPQHIMAILH 62
>P53814:SMOO_HUMAN Smoothelin - Homo sapiens (Human)| Length = 917 Score = 30.4 bits (67), Expect = 6.0 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 309 PPIEHVEADVDIVEVDLAPD-PVHPPRRETRRGQIPRSDPETSGEVLDYLTRG 154 PP+E EA EV +P+ P PP+ + Q + P T G+V++ L G Sbjct: 216 PPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSG 268
>P17564:MY116_MOUSE Myeloid differentiation primary response protein MyD116 - Mus| musculus (Mouse) Length = 657 Score = 30.0 bits (66), Expect = 7.7 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +3 Query: 21 FRTPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPIPQD-TTPFFLSSDNPTP 179 + TP S + R+ R P ++ RSS + P+ QD TTP L S+ P+P Sbjct: 599 YLTPDS----RARAWARLRNPSLPQSEPRSSSEATPLTQDVTTPSPLPSETPSP 648
>P98089:MUC2L_RAT Intestinal mucin-like protein - Rattus norvegicus (Rat)| Length = 837 Score = 30.0 bits (66), Expect = 7.7 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +3 Query: 27 TPTSSTHVKFRSEYSFRTKPTPSTKRRSSERSAPI--PQDTTPFFLSSDNP 173 TPTSS + + +K TPST + +S +S P P+ T P L D P Sbjct: 30 TPTSSQTTTPSTPSTTSSKSTPSTPQSTSSKSTPSTPPKTTLPGCLDFDPP 80
>Q55638:HYPF_SYNY3 Carbamoyltransferase hypF - Synechocystis sp. (strain PCC 6803)| Length = 767 Score = 30.0 bits (66), Expect = 7.7 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = +3 Query: 75 RTKPTPSTKRRSSERSAPIPQDTTPFFL--SSDNPTPRRLFPDLSEGSARVGSLFGEDEL 248 +T P P + + P+ + T F + SSD P + PDLS SA + LF + Sbjct: 62 KTLPPPGLIEQLAVEQLPL-ESFTNFTIRPSSDGPKTASILPDLSTCSACLTELFDPSD- 119 Query: 249 GRAQDPPLQCQHRPLHARLVGALP 320 R P + C H ++ ALP Sbjct: 120 RRYLYPFINCTHCGPRYTIIEALP 143
>Q8K298:ANLN_MOUSE Actin-binding protein anillin - Mus musculus (Mouse)| Length = 1121 Score = 30.0 bits (66), Expect = 7.7 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 13/93 (13%) Frame = +3 Query: 3 AVHGKKFRTPTSSTHVKFR----SEYSFRTKPTPSTKRRSS--ERSAPIPQDTTPFFLS- 161 A H K+ R P S + + E TKP+PS KR S E AP ++T P ++ Sbjct: 34 APHAKRGREPLSEASNQQQPLPGGEEKSCTKPSPSKKRCSDKIEVGAPDLENTEPIDVAK 93 Query: 162 --SDNPTPRRLFPD----LSEGSARVGSLFGED 242 S P PR+ P +SE A +L D Sbjct: 94 PCSPMPAPRQAKPPAPAAISESVAAPAALLSAD 126
>Q91YE9:5NT1B_MOUSE Cytosolic 5'-nucleotidase 1B - Mus musculus (Mouse)| Length = 573 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Frame = +3 Query: 18 KFRTPTSST--HVKFRSEYSFRTKPTPSTKRRSSERSAPIPQDTTPFFLSSDNPTPRRLF 191 K P SST S T P P T +SS + P + T L S PTP Sbjct: 87 KVEAPNSSTTSRTSSASPSQHETSPPPQTSEKSSTQQTPQNRPITQ--LESQPPTPPETE 144 Query: 192 PDLSEGSARV 221 P+ SA++ Sbjct: 145 PNSRRTSAKM 154
>P25389:KCC4_YEAST Probable serine/threonine-protein kinase KCC4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1037 Score = 30.0 bits (66), Expect = 7.8 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 232 KRDPTRAD-PSLRSGNKRRGVGLSDERKKGVVSCGIGADLSED 107 +R+P++ PSL S N G + D +KG S I A LS+D Sbjct: 854 QREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDD 896 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 121,773,795 Number of extensions: 2881845 Number of successful extensions: 8757 Number of sequences better than 10.0: 31 Number of HSP's gapped: 8738 Number of HSP's successfully gapped: 31 Length of query: 218 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 109 Effective length of database: 70,788,284 Effective search space: 7715922956 Effective search space used: 7715922956 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
