| Clone Name | FLbaf124j16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066161:Os05g0163000 | 1080 | 0.0 | 2 | Os01g0158500:Os01g0158500 | 806 | 0.0 | 3 | Os11g0675200:Os11g0675200 | 30 | 5.5 | 4 | AK099538:Os03g0109300 | 30 | 7.2 | 5 | Os05g0573900:Os05g0573900 | 30 | 9.4 | 6 | AK068553:Os05g0408300 | 30 | 9.4 |
|---|
>AK066161:Os05g0163000 | Length = 606 Score = 1080 bits (2792), Expect = 0.0 Identities = 534/609 (87%), Positives = 568/609 (93%) Frame = +3 Query: 204 MGDETSTSASGSAQEPAAPAVQGAGSVKQQISNLVALSLHATXXXXXXXXXXXXCTGKFG 383 MGDETSTS + +QEPAA GAGSVKQQ+S LV SL T CT KFG Sbjct: 1 MGDETSTSVATQSQEPAAV---GAGSVKQQLSKLVIASLRTTVPEVEVDPMVEVCTAKFG 57 Query: 384 DYQCNNAMGLWSKVKGSGTSFKNPNAIGQSIAKNLPACDVIESASVAGPGFVNIVLSKSW 563 DYQCNNAMGLWS++KGSGTSFKNPNAIGQ+IAKNLP D+IES SVAGPGFVNIVLS SW Sbjct: 58 DYQCNNAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSW 117 Query: 564 VAKRIQDMLVNGIKTWAPILPVKRVVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN 743 VAKRIQDMLVNGIKTWAPILPVKR VLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN Sbjct: 118 VAKRIQDMLVNGIKTWAPILPVKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN 177 Query: 744 VEVLRRNHVGDWGTQFGMLIEFLFEKFPNWEELGSQAIGDLQLFYKASKQRFDDDAEFKD 923 VEVLRRNHVGDWGTQFGMLI++LFEKFPNWEE+GSQAIGDLQ FYKASK RFD DAEFKD Sbjct: 178 VEVLRRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKD 237 Query: 924 RAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKLLDVQLEEKGESFYNPYIPQVLEK 1103 RAQQAVVRLQGGEE+YRAAW KICEISRNEFD VYKLL+V+LEEKGESFYNP+IPQVLE+ Sbjct: 238 RAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEE 297 Query: 1104 LSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT 1283 L+++GLI+ESEGA+VIFI+GHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT Sbjct: 298 LNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT 357 Query: 1284 DVGQQQHFDMFFKAARMAGWLPDPKEKKFPKTSHVGFGLVLGADGKRFRTRSTEVVRLGD 1463 DVGQQQHFDMFF AARMAGWLPDPKEKK+PKT+HVGFGLVLG+DGKRFRTRSTEVVRL + Sbjct: 358 DVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIE 417 Query: 1464 LLDEAKSRSKSELLQRLTENGKIVDWTDEELEKTSKAVGYGAVKYADLKNNRLTNYTFSF 1643 LLDEAKSRSKSELLQRLTENGKIVDWT+EELEKTS+AVGYGAVKYADLKNNRLTNYTFSF Sbjct: 418 LLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSF 477 Query: 1644 DQMLSDKGNTAVYLQYAHARICSIIRKSNMDVEELKVSGNISLAHPDERVLGLYLIRYAE 1823 +QMLSDKGNTAVYLQYAHARICSIIRKSN DVEELK+SG ISL HPDERVLGLYLIR+AE Sbjct: 478 EQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAE 537 Query: 1824 IVEEACTNLLPSVLCEYLYNLSEMFTRFYTNCQVVGSPEEPSRLLLCEATAVVMRQCFQL 2003 +VEEACTNLLP+VLCEYLYNLSEMFTRFYTNCQVVGSPEE SRLLLC+ATAVVMRQCF+L Sbjct: 538 VVEEACTNLLPNVLCEYLYNLSEMFTRFYTNCQVVGSPEETSRLLLCQATAVVMRQCFEL 597 Query: 2004 LGITPVYKL 2030 LGITPVYKL Sbjct: 598 LGITPVYKL 606
>Os01g0158500:Os01g0158500 | Length = 542 Score = 806 bits (2081), Expect = 0.0 Identities = 390/551 (70%), Positives = 465/551 (84%) Frame = +3 Query: 378 FGDYQCNNAMGLWSKVKGSGTSFKNPNAIGQSIAKNLPACDVIESASVAGPGFVNIVLSK 557 FGDYQCNNAM ++S+++GS T+F+NP A+GQ+IA NLP ++IES SVAGPG++NI LS Sbjct: 34 FGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSS 93 Query: 558 SWVAKRIQDMLVNGIKTWAPILPVKRVVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEF 737 +W+A+RIQDMLV GIKTWAPILPVKR VLDFSSPNIAKEMHVGH+RSTIIGDTLA MFEF Sbjct: 94 NWIAQRIQDMLVCGIKTWAPILPVKRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEF 153 Query: 738 SNVEVLRRNHVGDWGTQFGMLIEFLFEKFPNWEELGSQAIGDLQLFYKASKQRFDDDAEF 917 +NVEVLRRNHVGDWGTQFGMLIEFLFE+FP+WE++G+QA+GDLQ FYKASK+RFDDD +F Sbjct: 154 TNVEVLRRNHVGDWGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDF 213 Query: 918 KDRAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKLLDVQLEEKGESFYNPYIPQVL 1097 K+RA+QA GESFYNPYIP VL Sbjct: 214 KERARQA----------------------------------------GESFYNPYIPPVL 233 Query: 1098 EKLSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIY 1277 E+L+++GLI ES+GARVIF++ H PLIV+K+DGGFNYASTDLAALWYRLNVEKAEWIIY Sbjct: 234 EELTNKGLIVESKGARVIFVEDH--PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIY 291 Query: 1278 VTDVGQQQHFDMFFKAARMAGWLPDPKEKKFPKTSHVGFGLVLGADGKRFRTRSTEVVRL 1457 VTDVGQQ+HF M F AA+MAGWLP+ KK+PK SHVGFGLVLG+DGKRFRTR +EVVRL Sbjct: 292 VTDVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGKRFRTRCSEVVRL 351 Query: 1458 GDLLDEAKSRSKSELLQRLTENGKIVDWTDEELEKTSKAVGYGAVKYADLKNNRLTNYTF 1637 DLLDEAK+RSK++L++R T NG+I DWTD+EL++TS+A+GYGAVKY+DLKNNRLT+YTF Sbjct: 352 VDLLDEAKARSKAQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTF 411 Query: 1638 SFDQMLSDKGNTAVYLQYAHARICSIIRKSNMDVEELKVSGNISLAHPDERVLGLYLIRY 1817 SFDQMLSDKGNTAVYLQYAHARICSIIRK++ DVE+LK++G I+L HP ER LGL+LI++ Sbjct: 412 SFDQMLSDKGNTAVYLQYAHARICSIIRKASKDVEKLKMTGAITLGHPYERFLGLHLIQF 471 Query: 1818 AEIVEEACTNLLPSVLCEYLYNLSEMFTRFYTNCQVVGSPEEPSRLLLCEATAVVMRQCF 1997 E+VE+AC +L P LC+YLY+LS F++FYTNCQVVGSPEE SRLLLCEAT ++MRQCF Sbjct: 472 TEVVEQACADLQPHRLCDYLYSLSLTFSKFYTNCQVVGSPEETSRLLLCEATGIIMRQCF 531 Query: 1998 QLLGITPVYKL 2030 LLGITPV+KL Sbjct: 532 HLLGITPVHKL 542
>Os11g0675200:Os11g0675200 | Length = 727 Score = 30.4 bits (67), Expect = 5.5 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 1319 QGCQDGWLASRSKGKEVPKNESCWVWPC 1402 +G +DG +AS+ KGK S W+ PC Sbjct: 667 EGGEDGTVASKQKGKVALSPRSSWLMPC 694
>AK099538:Os03g0109300 | Length = 211 Score = 30.0 bits (66), Expect = 7.2 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -1 Query: 1211 IVEATISFNHYQRNLMTLNEYYTSTLTFLDQTLATQFLQNLRNIRIIKALP 1059 I A + +H L+ ++ YY S LTF+DQ + F+ RII + P Sbjct: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSAR-RIIVSAP 179
>Os05g0573900:Os05g0573900 | Length = 694 Score = 29.6 bits (65), Expect = 9.4 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +3 Query: 1443 EVVRLGDLLDEAKSRSKSELLQR--LTENGKIVDWTDEELEKTSKAVG 1580 E+VRL + L E +SR ++ELL+ L E IV + + EL S +G Sbjct: 100 ELVRLVEELQERESRLRTELLEHKILKETVAIVPFLENELAAKSSELG 147
>AK068553:Os05g0408300 | Length = 471 Score = 29.6 bits (65), Expect = 9.4 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = +3 Query: 1095 LEKLSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWII 1274 L +++ G EE GA + + G P+++V G F + L L Y EK + + Sbjct: 54 LVNVAAAGEEEERRGAAPVVLDGSPPPIVLV--HGIFGFGKGRLGGLSYFAGAEKKDDRV 111 Query: 1275 YVTDVG 1292 V D+G Sbjct: 112 LVPDLG 117 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 66,194,641 Number of extensions: 1550787 Number of successful extensions: 4669 Number of sequences better than 10.0: 6 Number of HSP's gapped: 4667 Number of HSP's successfully gapped: 7 Length of query: 747 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 639 Effective length of database: 11,075,427 Effective search space: 7077197853 Effective search space used: 7077197853 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)