ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf124j16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066161:Os05g0163000 1080 0.0
2Os01g0158500:Os01g0158500 806 0.0
3Os11g0675200:Os11g0675200 30 5.5
4AK099538:Os03g0109300 30 7.2
5Os05g0573900:Os05g0573900 30 9.4
6AK068553:Os05g0408300 30 9.4

>AK066161:Os05g0163000 |
          Length = 606
 Score = 1080 bits (2792), Expect = 0.0
 Identities = 534/609 (87%), Positives = 568/609 (93%)
 Frame = +3

Query: 204  MGDETSTSASGSAQEPAAPAVQGAGSVKQQISNLVALSLHATXXXXXXXXXXXXCTGKFG 383
            MGDETSTS +  +QEPAA    GAGSVKQQ+S LV  SL  T            CT KFG
Sbjct: 1    MGDETSTSVATQSQEPAAV---GAGSVKQQLSKLVIASLRTTVPEVEVDPMVEVCTAKFG 57

Query: 384  DYQCNNAMGLWSKVKGSGTSFKNPNAIGQSIAKNLPACDVIESASVAGPGFVNIVLSKSW 563
            DYQCNNAMGLWS++KGSGTSFKNPNAIGQ+IAKNLP  D+IES SVAGPGFVNIVLS SW
Sbjct: 58   DYQCNNAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSW 117

Query: 564  VAKRIQDMLVNGIKTWAPILPVKRVVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN 743
            VAKRIQDMLVNGIKTWAPILPVKR VLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN
Sbjct: 118  VAKRIQDMLVNGIKTWAPILPVKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSN 177

Query: 744  VEVLRRNHVGDWGTQFGMLIEFLFEKFPNWEELGSQAIGDLQLFYKASKQRFDDDAEFKD 923
            VEVLRRNHVGDWGTQFGMLI++LFEKFPNWEE+GSQAIGDLQ FYKASK RFD DAEFKD
Sbjct: 178  VEVLRRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKD 237

Query: 924  RAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKLLDVQLEEKGESFYNPYIPQVLEK 1103
            RAQQAVVRLQGGEE+YRAAW KICEISRNEFD VYKLL+V+LEEKGESFYNP+IPQVLE+
Sbjct: 238  RAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEE 297

Query: 1104 LSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT 1283
            L+++GLI+ESEGA+VIFI+GHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT
Sbjct: 298  LNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVT 357

Query: 1284 DVGQQQHFDMFFKAARMAGWLPDPKEKKFPKTSHVGFGLVLGADGKRFRTRSTEVVRLGD 1463
            DVGQQQHFDMFF AARMAGWLPDPKEKK+PKT+HVGFGLVLG+DGKRFRTRSTEVVRL +
Sbjct: 358  DVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIE 417

Query: 1464 LLDEAKSRSKSELLQRLTENGKIVDWTDEELEKTSKAVGYGAVKYADLKNNRLTNYTFSF 1643
            LLDEAKSRSKSELLQRLTENGKIVDWT+EELEKTS+AVGYGAVKYADLKNNRLTNYTFSF
Sbjct: 418  LLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSF 477

Query: 1644 DQMLSDKGNTAVYLQYAHARICSIIRKSNMDVEELKVSGNISLAHPDERVLGLYLIRYAE 1823
            +QMLSDKGNTAVYLQYAHARICSIIRKSN DVEELK+SG ISL HPDERVLGLYLIR+AE
Sbjct: 478  EQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAE 537

Query: 1824 IVEEACTNLLPSVLCEYLYNLSEMFTRFYTNCQVVGSPEEPSRLLLCEATAVVMRQCFQL 2003
            +VEEACTNLLP+VLCEYLYNLSEMFTRFYTNCQVVGSPEE SRLLLC+ATAVVMRQCF+L
Sbjct: 538  VVEEACTNLLPNVLCEYLYNLSEMFTRFYTNCQVVGSPEETSRLLLCQATAVVMRQCFEL 597

Query: 2004 LGITPVYKL 2030
            LGITPVYKL
Sbjct: 598  LGITPVYKL 606



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>Os01g0158500:Os01g0158500 |
          Length = 542

 Score =  806 bits (2081), Expect = 0.0
 Identities = 390/551 (70%), Positives = 465/551 (84%)
 Frame = +3

Query: 378  FGDYQCNNAMGLWSKVKGSGTSFKNPNAIGQSIAKNLPACDVIESASVAGPGFVNIVLSK 557
            FGDYQCNNAM ++S+++GS T+F+NP A+GQ+IA NLP  ++IES SVAGPG++NI LS 
Sbjct: 34   FGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSS 93

Query: 558  SWVAKRIQDMLVNGIKTWAPILPVKRVVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEF 737
            +W+A+RIQDMLV GIKTWAPILPVKR VLDFSSPNIAKEMHVGH+RSTIIGDTLA MFEF
Sbjct: 94   NWIAQRIQDMLVCGIKTWAPILPVKRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEF 153

Query: 738  SNVEVLRRNHVGDWGTQFGMLIEFLFEKFPNWEELGSQAIGDLQLFYKASKQRFDDDAEF 917
            +NVEVLRRNHVGDWGTQFGMLIEFLFE+FP+WE++G+QA+GDLQ FYKASK+RFDDD +F
Sbjct: 154  TNVEVLRRNHVGDWGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDF 213

Query: 918  KDRAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKLLDVQLEEKGESFYNPYIPQVL 1097
            K+RA+QA                                        GESFYNPYIP VL
Sbjct: 214  KERARQA----------------------------------------GESFYNPYIPPVL 233

Query: 1098 EKLSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIY 1277
            E+L+++GLI ES+GARVIF++ H  PLIV+K+DGGFNYASTDLAALWYRLNVEKAEWIIY
Sbjct: 234  EELTNKGLIVESKGARVIFVEDH--PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIY 291

Query: 1278 VTDVGQQQHFDMFFKAARMAGWLPDPKEKKFPKTSHVGFGLVLGADGKRFRTRSTEVVRL 1457
            VTDVGQQ+HF M F AA+MAGWLP+   KK+PK SHVGFGLVLG+DGKRFRTR +EVVRL
Sbjct: 292  VTDVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGKRFRTRCSEVVRL 351

Query: 1458 GDLLDEAKSRSKSELLQRLTENGKIVDWTDEELEKTSKAVGYGAVKYADLKNNRLTNYTF 1637
             DLLDEAK+RSK++L++R T NG+I DWTD+EL++TS+A+GYGAVKY+DLKNNRLT+YTF
Sbjct: 352  VDLLDEAKARSKAQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTF 411

Query: 1638 SFDQMLSDKGNTAVYLQYAHARICSIIRKSNMDVEELKVSGNISLAHPDERVLGLYLIRY 1817
            SFDQMLSDKGNTAVYLQYAHARICSIIRK++ DVE+LK++G I+L HP ER LGL+LI++
Sbjct: 412  SFDQMLSDKGNTAVYLQYAHARICSIIRKASKDVEKLKMTGAITLGHPYERFLGLHLIQF 471

Query: 1818 AEIVEEACTNLLPSVLCEYLYNLSEMFTRFYTNCQVVGSPEEPSRLLLCEATAVVMRQCF 1997
             E+VE+AC +L P  LC+YLY+LS  F++FYTNCQVVGSPEE SRLLLCEAT ++MRQCF
Sbjct: 472  TEVVEQACADLQPHRLCDYLYSLSLTFSKFYTNCQVVGSPEETSRLLLCEATGIIMRQCF 531

Query: 1998 QLLGITPVYKL 2030
             LLGITPV+KL
Sbjct: 532  HLLGITPVHKL 542



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>Os11g0675200:Os11g0675200 |
          Length = 727

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 1319 QGCQDGWLASRSKGKEVPKNESCWVWPC 1402
            +G +DG +AS+ KGK      S W+ PC
Sbjct: 667  EGGEDGTVASKQKGKVALSPRSSWLMPC 694



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>AK099538:Os03g0109300 |
          Length = 211

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 1211 IVEATISFNHYQRNLMTLNEYYTSTLTFLDQTLATQFLQNLRNIRIIKALP 1059
            I  A +  +H    L+ ++ YY S LTF+DQ +   F+      RII + P
Sbjct: 130  ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSAR-RIIVSAP 179



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>Os05g0573900:Os05g0573900 |
          Length = 694

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 1443 EVVRLGDLLDEAKSRSKSELLQR--LTENGKIVDWTDEELEKTSKAVG 1580
            E+VRL + L E +SR ++ELL+   L E   IV + + EL   S  +G
Sbjct: 100  ELVRLVEELQERESRLRTELLEHKILKETVAIVPFLENELAAKSSELG 147



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>AK068553:Os05g0408300 |
          Length = 471

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 1095 LEKLSSQGLIEESEGARVIFIQGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWII 1274
            L  +++ G  EE  GA  + + G   P+++V   G F +    L  L Y    EK +  +
Sbjct: 54   LVNVAAAGEEEERRGAAPVVLDGSPPPIVLV--HGIFGFGKGRLGGLSYFAGAEKKDDRV 111

Query: 1275 YVTDVG 1292
             V D+G
Sbjct: 112  LVPDLG 117


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 66,194,641
Number of extensions: 1550787
Number of successful extensions: 4669
Number of sequences better than 10.0: 6
Number of HSP's gapped: 4667
Number of HSP's successfully gapped: 7
Length of query: 747
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 639
Effective length of database: 11,075,427
Effective search space: 7077197853
Effective search space used: 7077197853
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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