ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf129j16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058086.1| Oryza sativa (japonica cultivar-group) Os03g0795800 (Os03g0795800) mRNA, complete cds Length = 1119 Score = 555 bits (280), Expect = e-154 Identities = 514/592 (86%) Strand = Plus / Plus Query: 221 tcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgg 280 |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 295 tcatccacaagatctacgtcatcctctccgtgcagctcgcgatgacggcggccgtggcgg 354 Query: 281 gcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctccaacgccggcttcg 340 ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| Sbjct: 355 ccttcgtcgtcaaggtccgcggcgtctcggagttcttcgtctcctccaacgccggattcg 414 Query: 341 gcctctacatcttcctcctcatcctgcccctcatcgtgctctgccccctgcgctactacc 400 ||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| Sbjct: 415 ccctctacatcttcctcctcttcctgcccctcatcgtgttgtgccctctgcgctactacc 474 Query: 401 accagaagcaccccgtcaacctcatcctgctcggcatcttcaccgtctccatcagcttcg 460 |||||||||| || || ||| | | |||||||| ||||||| || |||||||||||| Sbjct: 475 accagaagcatccggtgaacttgctgttgctcggcctcttcacggttgccatcagcttcg 534 Query: 461 ccgtcggcatgacgtgcgccttcaccagcggaaaaatcatcttggaagctgcaattctga 520 ||||||||||||| || |||| ||||||||||||| |||| || || || ||| ||| | Sbjct: 535 ccgtcggcatgacatgtgcctacaccagcggaaaagtcatttttgaggcggcagctctca 594 Query: 521 cagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccatg 580 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 595 cagcagtggtggtgatcagcttgacagcatacactttctgggctgcaaagagaggccatg 654 Query: 581 acttcaacttccttggccccttcctgtttggagctcttatggtgctgatgatgttctcac 640 ||||||| ||||| ||||||||||||||| ||| | ||||||||||| | || |||| Sbjct: 655 acttcaatttcctcggccccttcctgttttctgctgtgatggtgctgattttattttcac 714 Query: 641 ttatccagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgt 700 | |||||||| || |||||| ||||||||||||| | ||||| ||||| | |||| | Sbjct: 715 tgatccagatattcttcccattgggcaagatctctgaaatgatatatggcggactggcat 774 Query: 701 cgatcatcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgt 760 || || |||||| ||| |||||||||| |||||||||||| ||||||||||||||||| | Sbjct: 775 cgctcgtcttctctggatacatcatctacgacacggacaatatcatcaagcgctacactt 834 Query: 761 atgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 | |||||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 835 acgatgagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 886
>dbj|AK102207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087H03, full insert sequence Length = 1120 Score = 555 bits (280), Expect = e-154 Identities = 514/592 (86%) Strand = Plus / Plus Query: 221 tcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgg 280 |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 296 tcatccacaagatctacgtcatcctctccgtgcagctcgcgatgacggcggccgtggcgg 355 Query: 281 gcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctccaacgccggcttcg 340 ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| Sbjct: 356 ccttcgtcgtcaaggtccgcggcgtctcggagttcttcgtctcctccaacgccggattcg 415 Query: 341 gcctctacatcttcctcctcatcctgcccctcatcgtgctctgccccctgcgctactacc 400 ||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| Sbjct: 416 ccctctacatcttcctcctcttcctgcccctcatcgtgttgtgccctctgcgctactacc 475 Query: 401 accagaagcaccccgtcaacctcatcctgctcggcatcttcaccgtctccatcagcttcg 460 |||||||||| || || ||| | | |||||||| ||||||| || |||||||||||| Sbjct: 476 accagaagcatccggtgaacttgctgttgctcggcctcttcacggttgccatcagcttcg 535 Query: 461 ccgtcggcatgacgtgcgccttcaccagcggaaaaatcatcttggaagctgcaattctga 520 ||||||||||||| || |||| ||||||||||||| |||| || || || ||| ||| | Sbjct: 536 ccgtcggcatgacatgtgcctacaccagcggaaaagtcatttttgaggcggcagctctca 595 Query: 521 cagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccatg 580 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 596 cagcagtggtggtgatcagcttgacagcatacactttctgggctgcaaagagaggccatg 655 Query: 581 acttcaacttccttggccccttcctgtttggagctcttatggtgctgatgatgttctcac 640 ||||||| ||||| ||||||||||||||| ||| | ||||||||||| | || |||| Sbjct: 656 acttcaatttcctcggccccttcctgttttctgctgtgatggtgctgattttattttcac 715 Query: 641 ttatccagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgt 700 | |||||||| || |||||| ||||||||||||| | ||||| ||||| | |||| | Sbjct: 716 tgatccagatattcttcccattgggcaagatctctgaaatgatatatggcggactggcat 775 Query: 701 cgatcatcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgt 760 || || |||||| ||| |||||||||| |||||||||||| ||||||||||||||||| | Sbjct: 776 cgctcgtcttctctggatacatcatctacgacacggacaatatcatcaagcgctacactt 835 Query: 761 atgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 | |||||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 836 acgatgagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 887
>emb|CT830951.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA060D14, full insert sequence Length = 1123 Score = 547 bits (276), Expect = e-152 Identities = 513/592 (86%) Strand = Plus / Plus Query: 221 tcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgg 280 |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 322 tcatccacaagatctacgtcatcctctccgtgcagctcgcgatgacggcggccgtggcgg 381 Query: 281 gcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctccaacgccggcttcg 340 ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| Sbjct: 382 ccttcgtcgtcaaggtccgcggcgtctcggagttcttcgtctcctccaacgccggattcg 441 Query: 341 gcctctacatcttcctcctcatcctgcccctcatcgtgctctgccccctgcgctactacc 400 ||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| Sbjct: 442 ccctctacatcttcctcctcttcctgcccctcatcgtgttgtgccctctgcgctactacc 501 Query: 401 accagaagcaccccgtcaacctcatcctgctcggcatcttcaccgtctccatcagcttcg 460 |||||||||| || || ||| | | |||||||| ||||||| || |||||||||||| Sbjct: 502 accagaagcatccggtgaacttgctgttgctcggcctcttcacggttgccatcagcttcg 561 Query: 461 ccgtcggcatgacgtgcgccttcaccagcggaaaaatcatcttggaagctgcaattctga 520 ||||||||||||| || |||| ||||||||||||| |||| || || || ||| ||| | Sbjct: 562 ccgtcggcatgacatgtgcctacaccagcggaaaagtcatttttgaggcggcagctctca 621 Query: 521 cagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccatg 580 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 622 cagcagtggtggtgatcagcttgacagcatacactttctgggctgcaaagagaggccatg 681 Query: 581 acttcaacttccttggccccttcctgtttggagctcttatggtgctgatgatgttctcac 640 ||||||| ||||| ||||||||||||||| ||| | ||||||||||| | || |||| Sbjct: 682 acttcaatttcctcggccccttcctgttttctgctgtgatggtgctgattttattttcac 741 Query: 641 ttatccagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgt 700 | |||||||| || |||||| ||||||||||||| | ||||| ||||| | |||| | Sbjct: 742 tgatccagatattcttcccattgggcaagatctctgaaatgatatatggcggactggcat 801 Query: 701 cgatcatcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgt 760 || || |||||| ||| |||||||||| |||||||||||| || |||||||||||||| | Sbjct: 802 cgctcgtcttctctggatacatcatctacgacacggacaatattatcaagcgctacactt 861 Query: 761 atgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 | |||||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 862 acgatgagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 913
>gb|AY112478.1| Zea mays CL3582_1 mRNA sequence Length = 1032 Score = 500 bits (252), Expect = e-138 Identities = 548/650 (84%) Strand = Plus / Minus Query: 208 ctgcgctgggccttcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacg 267 ||||| ||||| ||| ||||||||||||||| |||||| |||| ||||||||||||||| Sbjct: 858 ctgcggtgggcgttcgtccgcaagatctacgccatcctagccgtccagctcgccatgacg 799 Query: 268 gccgccgtcgcgggcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctcc 327 ||||| ||| | | ||||||||||||||| |||||||||||| | ||||||||||||||| Sbjct: 798 gccgcggtctccgccttcgtcgtcaaggtgcccgccgtctccaacttcttcgtctcctcc 739 Query: 328 aacgccggcttcggcctctacatcttcctcctcatcctgcccctcatcgtgctctgcccc 387 |||||||| ||| ||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 738 aacgccggggtcgcgctctacatcttcctcatcatcctgcccttcatcgtgctgtgccct 679 Query: 388 ctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggcatcttcaccgtc 447 ||||||||||||||||||||||| || ||||| || | ||||||||| ||||||||||| Sbjct: 678 ctgcgctactaccaccagaagcatccggtcaatctgctgctgctcggcctcttcaccgtc 619 Query: 448 tccatcagcttcgccgtcggcatgacgtgcgccttcaccagcggaaaaatcatcttggaa 507 ||||||||||||||||||||||||| ||||| ||||| ||||| |||| ||||| Sbjct: 618 gccatcagcttcgccgtcggcatgacatgcgctttcactagcggnnnnntcattttggag 559 Query: 508 gctgcaattctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgca 567 ||||| ||||| ||||| |||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 558 gctgccattcttacagcggtggtggtgaacagcttaactgcttacactttctgggctgcg 499 Query: 568 aagagaggccatgacttcaacttccttggccccttcctgtttggagctcttatggtgctg 627 ||||| |||||||||||||||||||| ||||||||||| ||| ||| | |||||||| Sbjct: 498 aagaggggccatgacttcaacttcctcggccccttcctaattgctgctatcatggtgctc 439 Query: 628 atgatgttctcacttatccagatctttttcccactgggcaagatctccgtcatgatctat 687 ||| |||| ||||| ||||||||| |||||||||||||||||| || ||||| ||| Sbjct: 438 atggtgttttcactaatccagatcnnnnncccactgggcaagatctctgtgatgatatat 379 Query: 688 ggggccgtggcgtcgatcatcttctgtggctacatcatcttcgacacggacaacatcatc 747 || | |||| || | |||||||||||||| ||||||| ||||| ||||| |||||| Sbjct: 378 ggtggattggcatctcttatcttctgtggctatatcatctatgacacagacaatatcatc 319 Query: 748 aagcgctacacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatc 807 |||||| |||| || ||| | ||||| ||||| || || || |||||||||||| | ||| Sbjct: 318 aagcgccacacatacgatcaatacatatgggcagctgtttcactctacctcgacgtcatc 259 Query: 808 aacctgttcctgaatctgatgcagattctgcgtgcggctgatagctgagc 857 ||| |||||||| |||| ||||| | ||| | || || ||||||||||| Sbjct: 258 aacttgttcctgtctctgctgcagctgctgagggcagccgatagctgagc 209
>ref|NM_001065561.1| Oryza sativa (japonica cultivar-group) Os07g0177300 (Os07g0177300) mRNA, complete cds Length = 1201 Score = 367 bits (185), Expect = 6e-98 Identities = 368/429 (85%) Strand = Plus / Plus Query: 177 gctctacccggggatgacggaggacgtggggctgcgctgggccttcatccgcaagatcta 236 |||||||||||||||||||||| || | |||| ||||| ||||||| |||||||| Sbjct: 216 gctctacccggggatgacggagccgccggagatgcggtgggcgctcatccggaagatcta 275 Query: 237 cgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgggcttcgtcgtcaaggt 296 ||||||||||||| |||||||| | | || ||||||||||| | | ||||||||||||| Sbjct: 276 cgtcatcctctccatgcagctcctcctcaccgccgccgtcgccgccgtcgtcgtcaaggt 335 Query: 297 ccccgccgtctccgagttcttcgtctcctccaacgccggcttcggcctctacatcttcct 356 || |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 336 ccgcgccatctcccacttcttcgtctcctcccacgccggcctcggcctctacatcttcct 395 Query: 357 cctcatcctgcccctcatcgtgctctgccccctgcgctactaccaccagaagcaccccgt 416 | ||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||| || Sbjct: 396 catcatcctccccttcatcgtgctctgcccgctgtactactaccaccagaagcacccggt 455 Query: 417 caacctcatcctgctcggcatcttcaccgtctccatcagcttcgccgtcggcatgacgtg 476 |||||| ||||||||||| ||||||||||| ||||||||||||| || || ||||| || Sbjct: 456 caacctgatcctgctcggtctcttcaccgtcgccatcagcttcgcggttgggatgacatg 515 Query: 477 cgccttcaccagcggaaaaatcatcttggaagctgcaattctgacagcagtggtggtgat 536 |||||||||||| || || |||| |||| |||||||||| ||| |||| || ||| | Sbjct: 516 cgccttcaccagtggcaaggtcattctggagtctgcaattcttacaacagttgttgtgtt 575 Query: 537 cagcttgactgcctacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 ||| ||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 576 tagcctgactgcctacacattctgggctgcaaagaggggccgtgacttcagcttccttgg 635 Query: 597 ccccttcct 605 ||| ||||| Sbjct: 636 ccctttcct 644 Score = 137 bits (69), Expect = 1e-28 Identities = 147/173 (84%) Strand = Plus / Plus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 |||||| | ||||| ||||||| ||||||| ||||||||||| | | |||||| || Sbjct: 685 cagatcctattcccgctgggcaggatctcccagatgatctatggcgggatcgcgtcgctc 744 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 745 atcttcagtggctacatcgtctacgacacggacaacatcatcaagcgctacacctacgac 804 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 ||||| ||||||| ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 805 cagtacgtctgggccgccgtctccctctacctcgacgtcatcaacctcttcct 857
>dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H10, full insert sequence Length = 1203 Score = 359 bits (181), Expect = 1e-95 Identities = 367/429 (85%) Strand = Plus / Plus Query: 177 gctctacccggggatgacggaggacgtggggctgcgctgggccttcatccgcaagatcta 236 |||||||||||||||||||||| || | |||| ||||| ||||||| |||||||| Sbjct: 218 gctctacccggggatgacggagccgccggagatgcggtgggcgctcatccggaagatcta 277 Query: 237 cgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgggcttcgtcgtcaaggt 296 ||||||||||||| |||||||| | | || ||||||||||| | | ||||||||||||| Sbjct: 278 cgtcatcctctccatgcagctcctcctcaccgccgccgtcgccgccgtcgtcgtcaaggt 337 Query: 297 ccccgccgtctccgagttcttcgtctcctccaacgccggcttcggcctctacatcttcct 356 | |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 338 cagcgccatctcccacttcttcgtctcctcccacgccggcctcggcctctacatcttcct 397 Query: 357 cctcatcctgcccctcatcgtgctctgccccctgcgctactaccaccagaagcaccccgt 416 | ||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||| || Sbjct: 398 catcatcctccccttcatcgtgctctgcccgctgtactactaccaccagaagcacccggt 457 Query: 417 caacctcatcctgctcggcatcttcaccgtctccatcagcttcgccgtcggcatgacgtg 476 |||||| ||||||||||| ||||||||||| ||||||||||||| || || ||||| || Sbjct: 458 caacctgatcctgctcggtctcttcaccgtcgccatcagcttcgcggttgggatgacatg 517 Query: 477 cgccttcaccagcggaaaaatcatcttggaagctgcaattctgacagcagtggtggtgat 536 |||||||||||| || || |||| |||| |||||||||| ||| |||| || ||| | Sbjct: 518 cgccttcaccagtggcaaggtcattctggagtctgcaattcttacaacagttgttgtgtt 577 Query: 537 cagcttgactgcctacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 ||| ||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 578 tagcctgactgcctacacattctgggctgcaaagaggggccgtgacttcagcttccttgg 637 Query: 597 ccccttcct 605 ||| ||||| Sbjct: 638 ccctttcct 646 Score = 137 bits (69), Expect = 1e-28 Identities = 147/173 (84%) Strand = Plus / Plus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 |||||| | ||||| ||||||| ||||||| ||||||||||| | | |||||| || Sbjct: 687 cagatcctattcccgctgggcaggatctcccagatgatctatggcgggatcgcgtcgctc 746 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 747 atcttcagtggctacatcgtctacgacacggacaacatcatcaagcgctacacctacgac 806 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 ||||| ||||||| ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 807 cagtacgtctgggccgccgtctccctctacctcgacgtcatcaacctcttcct 859
>gb|AY105221.1| Zea mays PCO086679 mRNA sequence Length = 1138 Score = 287 bits (145), Expect = 4e-74 Identities = 496/613 (80%) Strand = Plus / Plus Query: 207 gctgcgctgggccttcatccgcaagatctacgtcatcctctccgtgcagctcgccatgac 266 |||||||||||| |||||||||||||||||||||| |||||| | ||||| | | || Sbjct: 293 gctgcgctgggcgctcatccgcaagatctacgtcattctctccctccagctgctcctcac 352 Query: 267 ggccgccgtcgcgggcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctc 326 |||| |||||| | ||||||||||||||| |||| || | | |||||| | || | Sbjct: 353 cgccgtcgtcgccgcagtcgtcgtcaaggtccgcgccatcccgcacttcttcaccaccac 412 Query: 327 caacgccggcttcggcctctacatcttcctcctcatcctgcccctcatcgtgctctgccc 386 || ||||||| |||||||||||||||||||| ||||||| ||| | |||||||| ||||| Sbjct: 413 cagcgccggcctcggcctctacatcttcctcatcatcctcccctttatcgtgctgtgccc 472 Query: 387 cctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggcatcttcaccgt 446 ||| || ||||||| |||||||||| |||||||| |||||||||||| |||||||||| Sbjct: 473 gctgtacttctaccacgagaagcacccagtcaacctgatcctgctcggcctcttcaccgt 532 Query: 447 ctccatcagcttcgccgtcggcatgacgtgcgccttcaccagcggaaaaatcatcttgga 506 |||||||||| || || |||||||| || ||||||||||| || || |||| |||| Sbjct: 533 tgccatcagctttgctgtgggcatgacatgtgccttcaccagtggcaaggtcattctgga 592 Query: 507 agctgcaattctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgc 566 |||||||||||||| ||||||| ||| ||||| | || || |||||||||||||| | Sbjct: 593 gtctgcaattctgacaacagtggtcgtgctcagccttaccgcatacactttctgggccgt 652 Query: 567 aaagagaggccatgacttcaacttccttggccccttcctgtttggagctcttatggtgct 626 || || ||| | ||||||| |||||| || || |||||||| | || | || ||||| Sbjct: 653 gaataggggcaaagacttcagcttcctgggtcctttcctgttcgccgccatcatagtgct 712 Query: 627 gatgatgttctcacttatccagatctttttcccactgggcaagatctccgtcatgatcta 686 | | ||||| |||| ||||||||| | ||||||||||||||| ||||| |||||||| Sbjct: 713 gcttgtgttcgcactcatccagatcctgttcccactgggcaagctctcccagatgatcta 772 Query: 687 tggggccgtggcgtcgatcatcttctgtggctacatcatcttcgacacggacaacatcat 746 || | |||||||| |||||||| | || |||||| ||| |||||| |||||||||| Sbjct: 773 cggcgggctggcgtcgctcatcttcagcgggtacatcgtctacgacacaaacaacatcat 832 Query: 747 caagcgctacacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattat 806 ||||||||||||||| || ||||| ||||||| || || || || ||||| ||| |||| Sbjct: 833 caagcgctacacgtacgaccagtacgtctgggccgcagtctcactgtacctggacgttat 892 Query: 807 caacctgttcctg 819 |||||| |||||| Sbjct: 893 caacctcttcctg 905
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 222 bits (112), Expect = 2e-54 Identities = 145/156 (92%) Strand = Plus / Plus Query: 221 tcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgg 280 |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 78365 tcatccacaagatctacgtcatcctctccgtgcagctcgcgatgacggcggccgtggcgg 78424 Query: 281 gcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctccaacgccggcttcg 340 ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| Sbjct: 78425 ccttcgtcgtcaaggtccgcggcgtctcggagttcttcgtctcctccaacgccggattcg 78484 Query: 341 gcctctacatcttcctcctcatcctgcccctcatcg 376 ||||||||||||||||||| ||||||||||||||| Sbjct: 78485 ccctctacatcttcctcctcttcctgcccctcatcg 78520 Score = 147 bits (74), Expect = 1e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 520 acagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccat 579 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 79779 acagcagtggtggtgatcagcttgacagcatacactttctgggctgcaaagagaggccat 79838 Query: 580 gacttcaacttccttggccccttcctgtttggagctcttatggtgctgat 629 |||||||| ||||| ||||||||||||||| ||| | ||||||||||| Sbjct: 79839 gacttcaatttcctcggccccttcctgttttctgctgtgatggtgctgat 79888 Score = 117 bits (59), Expect = 9e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 ||||| || |||||| ||||||||||||| | ||||| ||||| | |||| ||| || Sbjct: 80029 cagatattcttcccattgggcaagatctctgaaatgatatatggcggactggcatcgctc 80088 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||| |||||||||| |||||||||||| ||||||||||||||||| || ||| Sbjct: 80089 gtcttctctggatacatcatctacgacacggacaatatcatcaagcgctacacttacgat 80148 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 ||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 80149 gagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 80195 Score = 91.7 bits (46), Expect = 5e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 382 tgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggcatcttc 441 ||||| ||||||||||||||||||||||| || || ||| | | |||||||| ||||| Sbjct: 78633 tgccctctgcgctactaccaccagaagcatccggtgaacttgctgttgctcggcctcttc 78692 Query: 442 accgtctccatcagcttcgccgtcggcatgacgtgcgccttcaccagcgg 491 || || ||||||||||||||||||||||||| || |||| ||||||||| Sbjct: 78693 acggttgccatcagcttcgccgtcggcatgacatgtgcctacaccagcgg 78742
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 222 bits (112), Expect = 2e-54 Identities = 145/156 (92%) Strand = Plus / Minus Query: 221 tcatccgcaagatctacgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgg 280 |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 32891686 tcatccacaagatctacgtcatcctctccgtgcagctcgcgatgacggcggccgtggcgg 32891627 Query: 281 gcttcgtcgtcaaggtccccgccgtctccgagttcttcgtctcctccaacgccggcttcg 340 ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| Sbjct: 32891626 ccttcgtcgtcaaggtccgcggcgtctcggagttcttcgtctcctccaacgccggattcg 32891567 Query: 341 gcctctacatcttcctcctcatcctgcccctcatcg 376 ||||||||||||||||||| ||||||||||||||| Sbjct: 32891566 ccctctacatcttcctcctcttcctgcccctcatcg 32891531 Score = 147 bits (74), Expect = 1e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 520 acagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccat 579 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 32890272 acagcagtggtggtgatcagcttgacagcatacactttctgggctgcaaagagaggccat 32890213 Query: 580 gacttcaacttccttggccccttcctgtttggagctcttatggtgctgat 629 |||||||| ||||| ||||||||||||||| ||| | ||||||||||| Sbjct: 32890212 gacttcaatttcctcggccccttcctgttttctgctgtgatggtgctgat 32890163 Score = 117 bits (59), Expect = 9e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 ||||| || |||||| ||||||||||||| | ||||| ||||| | |||| ||| || Sbjct: 32890022 cagatattcttcccattgggcaagatctctgaaatgatatatggcggactggcatcgctc 32889963 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||| |||||||||| |||||||||||| ||||||||||||||||| || ||| Sbjct: 32889962 gtcttctctggatacatcatctacgacacggacaatatcatcaagcgctacacttacgat 32889903 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 ||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 32889902 gagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 32889856 Score = 91.7 bits (46), Expect = 5e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 382 tgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggcatcttc 441 ||||| ||||||||||||||||||||||| || || ||| | | |||||||| ||||| Sbjct: 32891418 tgccctctgcgctactaccaccagaagcatccggtgaacttgctgttgctcggcctcttc 32891359 Query: 442 accgtctccatcagcttcgccgtcggcatgacgtgcgccttcaccagcgg 491 || || ||||||||||||||||||||||||| || |||| ||||||||| Sbjct: 32891358 acggttgccatcagcttcgccgtcggcatgacatgtgcctacaccagcgg 32891309 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 313 ttcttcgtctcctccaacgccggcttcggcctctacatcttcctcctcatcctgcccctc 372 |||||||||||| || ||||||||||| |||||||||||||||| ||||||| ||| || Sbjct: 30438287 ttcttcgtctccacccccgccggcttcgccctctacatcttcctcatcatcctccccttc 30438346 Query: 373 atcg 376 |||| Sbjct: 30438347 atcg 30438350 Score = 52.0 bits (26), Expect = 0.005 Identities = 89/110 (80%) Strand = Plus / Plus Query: 709 ttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgatgag 768 ||||| ||||||||| | | ||||||||| ||| |||||||| | ||| | || || ||| Sbjct: 30438780 ttctgcggctacatcgtgtacgacacggataacctcatcaagaggtactcctacgacgag 30438839 Query: 769 tacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 || ||||||| ||||| | |||||||||||| | |||||||| ||||| Sbjct: 30438840 tatgtctgggccgccgtcgcgctctacctcgacgtcatcaacctcttcct 30438889
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 167 bits (84), Expect = 1e-37 Identities = 171/200 (85%) Strand = Plus / Minus Query: 177 gctctacccggggatgacggaggacgtggggctgcgctgggccttcatccgcaagatcta 236 |||||||||||||||||||||| || | |||| ||||| ||||||| |||||||| Sbjct: 4124023 gctctacccggggatgacggagccgccggagatgcggtgggcgctcatccggaagatcta 4123964 Query: 237 cgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgggcttcgtcgtcaaggt 296 ||||||||||||| |||||||| | | || ||||||||||| | | ||||||||||||| Sbjct: 4123963 cgtcatcctctccatgcagctcctcctcaccgccgccgtcgccgccgtcgtcgtcaaggt 4123904 Query: 297 ccccgccgtctccgagttcttcgtctcctccaacgccggcttcggcctctacatcttcct 356 || |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 4123903 ccgcgccatctcccacttcttcgtctcctcccacgccggcctcggcctctacatcttcct 4123844 Query: 357 cctcatcctgcccctcatcg 376 | ||||||| ||| |||||| Sbjct: 4123843 catcatcctccccttcatcg 4123824 Score = 137 bits (69), Expect = 1e-28 Identities = 147/173 (84%) Strand = Plus / Minus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 |||||| | ||||| ||||||| ||||||| ||||||||||| | | |||||| || Sbjct: 4121898 cagatcctattcccgctgggcaggatctcccagatgatctatggcgggatcgcgtcgctc 4121839 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 4121838 atcttcagtggctacatcgtctacgacacggacaacatcatcaagcgctacacctacgac 4121779 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 ||||| ||||||| ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 4121778 cagtacgtctgggccgccgtctccctctacctcgacgtcatcaacctcttcct 4121726 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 376 gtgctctgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggc 435 ||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 4123355 gtgctctgcccgctgtactactaccaccagaagcacccggtcaacctgatcctgctcggt 4123296 Query: 436 atcttcaccgtctccatcagcttcgccgtcggcatgacgtgcgccttcaccag 488 ||||||||||| ||||||||||||| || || ||||| |||||||||||||| Sbjct: 4123295 ctcttcaccgtcgccatcagcttcgcggttgggatgacatgcgccttcaccag 4123243 Score = 97.6 bits (49), Expect = 9e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 509 ctgcaattctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgcaa 568 |||||||||| ||| |||| || ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 4122130 ctgcaattcttacaacagttgttgtgtttagcctgactgcctacacattctgggctgcaa 4122071 Query: 569 agagaggccatgacttcaacttccttggccccttcct 605 |||| |||| |||||||| |||||||||||| ||||| Sbjct: 4122070 agaggggccgtgacttcagcttccttggccctttcct 4122034 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttc 603 |||||| |||||||| || ||||||||||||||||||| |||||| |||||||| Sbjct: 4120259 ctacacattctgggcggccaagagaggccatgacttcagcttcctccgccccttc 4120205
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 167 bits (84), Expect = 1e-37 Identities = 171/200 (85%) Strand = Plus / Minus Query: 177 gctctacccggggatgacggaggacgtggggctgcgctgggccttcatccgcaagatcta 236 |||||||||||||||||||||| || | |||| ||||| ||||||| |||||||| Sbjct: 7645 gctctacccggggatgacggagccgccggagatgcggtgggcgctcatccggaagatcta 7586 Query: 237 cgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgggcttcgtcgtcaaggt 296 ||||||||||||| |||||||| | | || ||||||||||| | | ||||||||||||| Sbjct: 7585 cgtcatcctctccatgcagctcctcctcaccgccgccgtcgccgccgtcgtcgtcaaggt 7526 Query: 297 ccccgccgtctccgagttcttcgtctcctccaacgccggcttcggcctctacatcttcct 356 || |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 7525 ccgcgccatctcccacttcttcgtctcctcccacgccggcctcggcctctacatcttcct 7466 Query: 357 cctcatcctgcccctcatcg 376 | ||||||| ||| |||||| Sbjct: 7465 catcatcctccccttcatcg 7446 Score = 137 bits (69), Expect = 1e-28 Identities = 147/173 (84%) Strand = Plus / Minus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 |||||| | ||||| ||||||| ||||||| ||||||||||| | | |||||| || Sbjct: 5520 cagatcctattcccgctgggcaggatctcccagatgatctatggcgggatcgcgtcgctc 5461 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 5460 atcttcagtggctacatcgtctacgacacggacaacatcatcaagcgctacacctacgac 5401 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 ||||| ||||||| ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 5400 cagtacgtctgggccgccgtctccctctacctcgacgtcatcaacctcttcct 5348 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 376 gtgctctgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggc 435 ||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 6977 gtgctctgcccgctgtactactaccaccagaagcacccggtcaacctgatcctgctcggt 6918 Query: 436 atcttcaccgtctccatcagcttcgccgtcggcatgacgtgcgccttcaccag 488 ||||||||||| ||||||||||||| || || ||||| |||||||||||||| Sbjct: 6917 ctcttcaccgtcgccatcagcttcgcggttgggatgacatgcgccttcaccag 6865 Score = 97.6 bits (49), Expect = 9e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 509 ctgcaattctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgcaa 568 |||||||||| ||| |||| || ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 5752 ctgcaattcttacaacagttgttgtgtttagcctgactgcctacacattctgggctgcaa 5693 Query: 569 agagaggccatgacttcaacttccttggccccttcct 605 |||| |||| |||||||| |||||||||||| ||||| Sbjct: 5692 agaggggccgtgacttcagcttccttggccctttcct 5656 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttc 603 |||||| |||||||| || ||||||||||||||||||| |||||| |||||||| Sbjct: 3881 ctacacattctgggcggccaagagaggccatgacttcagcttcctccgccccttc 3827
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 167 bits (84), Expect = 1e-37 Identities = 171/200 (85%) Strand = Plus / Minus Query: 177 gctctacccggggatgacggaggacgtggggctgcgctgggccttcatccgcaagatcta 236 |||||||||||||||||||||| || | |||| ||||| ||||||| |||||||| Sbjct: 116881 gctctacccggggatgacggagccgccggagatgcggtgggcgctcatccggaagatcta 116822 Query: 237 cgtcatcctctccgtgcagctcgccatgacggccgccgtcgcgggcttcgtcgtcaaggt 296 ||||||||||||| |||||||| | | || ||||||||||| | | ||||||||||||| Sbjct: 116821 cgtcatcctctccatgcagctcctcctcaccgccgccgtcgccgccgtcgtcgtcaaggt 116762 Query: 297 ccccgccgtctccgagttcttcgtctcctccaacgccggcttcggcctctacatcttcct 356 || |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 116761 ccgcgccatctcccacttcttcgtctcctcccacgccggcctcggcctctacatcttcct 116702 Query: 357 cctcatcctgcccctcatcg 376 | ||||||| ||| |||||| Sbjct: 116701 catcatcctccccttcatcg 116682 Score = 137 bits (69), Expect = 1e-28 Identities = 147/173 (84%) Strand = Plus / Minus Query: 646 cagatctttttcccactgggcaagatctccgtcatgatctatggggccgtggcgtcgatc 705 |||||| | ||||| ||||||| ||||||| ||||||||||| | | |||||| || Sbjct: 114756 cagatcctattcccgctgggcaggatctcccagatgatctatggcgggatcgcgtcgctc 114697 Query: 706 atcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgat 765 |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 114696 atcttcagtggctacatcgtctacgacacggacaacatcatcaagcgctacacctacgac 114637 Query: 766 gagtacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 ||||| ||||||| ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 114636 cagtacgtctgggccgccgtctccctctacctcgacgtcatcaacctcttcct 114584 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 376 gtgctctgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctcggc 435 ||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 116213 gtgctctgcccgctgtactactaccaccagaagcacccggtcaacctgatcctgctcggt 116154 Query: 436 atcttcaccgtctccatcagcttcgccgtcggcatgacgtgcgccttcaccag 488 ||||||||||| ||||||||||||| || || ||||| |||||||||||||| Sbjct: 116153 ctcttcaccgtcgccatcagcttcgcggttgggatgacatgcgccttcaccag 116101 Score = 97.6 bits (49), Expect = 9e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 509 ctgcaattctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgcaa 568 |||||||||| ||| |||| || ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 114988 ctgcaattcttacaacagttgttgtgtttagcctgactgcctacacattctgggctgcaa 114929 Query: 569 agagaggccatgacttcaacttccttggccccttcct 605 |||| |||| |||||||| |||||||||||| ||||| Sbjct: 114928 agaggggccgtgacttcagcttccttggccctttcct 114892 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttc 603 |||||| |||||||| || ||||||||||||||||||| |||||| |||||||| Sbjct: 113117 ctacacattctgggcggccaagagaggccatgacttcagcttcctccgccccttc 113063
>dbj|AK120312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055J23, full insert sequence Length = 406 Score = 127 bits (64), Expect = 1e-25 Identities = 148/176 (84%) Strand = Plus / Plus Query: 637 tcacttatccagatctttttcccactgggcaagatctccgtcatgatctatggggccgtg 696 ||||| |||||||| || |||||| ||||||||||||| | ||||| ||||| | || Sbjct: 11 tcactgatccagatattcttcccattgggcaagatctctgaaatgatatatggcggactg 70 Query: 697 gcgtcgatcatcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctac 756 || ||| || |||||| ||| |||||||||| |||||||||||| ||||||||||||||| Sbjct: 71 gcatcgctcgtcttctctggatacatcatctacgacacggacaatatcatcaagcgctac 130 Query: 757 acgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 || || |||||||| |||||||||| || || |||||||||||| | |||||||| Sbjct: 131 acttacgatgagtatgtctgggctgctgtctcgctctacctcgacgtgatcaacct 186
>emb|AJ879936.2| Capsicum chinense mRNA for putative receptor associated protein (ORF1) Length = 1037 Score = 123 bits (62), Expect = 1e-24 Identities = 215/266 (80%) Strand = Plus / Plus Query: 517 ctgacagcagtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggc 576 |||||| ||| ||||||||| || |||| || ||||| |||||||| || || |||||| Sbjct: 493 ctgacaacagcggtggtgattagtctgacagcatacaccttctgggcagctaaaagaggc 552 Query: 577 catgacttcaacttccttggccccttcctgtttggagctcttatggtgctgatgatgttc 636 || || ||||||||||| || || ||| |||| || |||||| | || || | ||||| Sbjct: 553 caagatttcaacttcctgggacctttcttgttcggtgctcttgttgttcttctattgttc 612 Query: 637 tcacttatccagatctttttcccactgggcaagatctccgtcatgatctatggggccgtg 696 || | ||||||||||| ||||| ||||| ||||| || || ||||||||||| | || Sbjct: 613 tccttaatccagatcttcttccctctgggtaagatttcagtgatgatctatggcggtctg 672 Query: 697 gcgtcgatcatcttctgtggctacatcatcttcgacacggacaacatcatcaagcgctac 756 || |||||||| |||||||| |||||| | | ||| || ||||| | |||||||||||| Sbjct: 673 gcatcgatcatattctgtggatacatcgtttacgatacagacaatctaatcaagcgctac 732 Query: 757 acgtatgatgagtacatctgggctgc 782 || ||||||||||||||||||||||| Sbjct: 733 acttatgatgagtacatctgggctgc 758
>gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence Length = 1133 Score = 105 bits (53), Expect = 4e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttcctgttt 609 ||||| |||||||| || || |||||||| || ||||||||||| || || || ||||| Sbjct: 499 tacaccttctgggcggctaaaagaggccaagatttcaacttcctgggaccttttttgttt 558 Query: 610 ggagctcttatggtgctgatgatgttctcacttatccagatctttttcccactgggcaag 669 || |||||||| || || || |||| || | |||||||| ||||||| ||||| ||| Sbjct: 559 ggtgctcttattgttcttctgttgttttccttcatccagattcttttccctctgggtaag 618 Query: 670 atctccgtcatgatctatggggccgtggcgtcgatcatcttctgtggctacatcatcttc 729 ||||| || |||||||||||| | ||||||||||| |||||||| ||||| ||| Sbjct: 619 atctcagtgatgatctatgggtgtcttgcgtcgatcatattctgtgggtacattgtctat 678 Query: 730 gacacggacaacatcatcaagcgctacacgtatgatgagtacatctgggctgc 782 || || ||||| | |||||||| ||||| ||||||||||||||||||||||| Sbjct: 679 gatacagacaatctaatcaagcggtacacttatgatgagtacatctgggctgc 731
>dbj|AK242300.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075192P11, full insert sequence Length = 1002 Score = 93.7 bits (47), Expect = 1e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 313 ttcttcgtctcctccaacgccggcttcggcctctacatcttcctcctcatcctgcccctc 372 |||||||||||| || ||||||||||| |||||||||||||||| ||||||| ||| || Sbjct: 305 ttcttcgtctccacccccgccggcttcgccctctacatcttcctcatcatcctccccttc 364 Query: 373 atcgtgctctgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctc 432 |||||||| ||||| || ||||||| ||||| ||||| || |||||| ||||||| Sbjct: 365 atcgtgctttgcccgctctactactactaccagcgccacccggtgaacctcctcctgctg 424 Query: 433 ggcatcttcaccgtctccatcagcttcgccgtcggcatgacgtgcgccttcacca 487 | | ||||||| | | |||||||||||||| ||| | || ||||| ||||||| Sbjct: 425 gccctcttcacggcggcgatcagcttcgccgtgggcctcacctgcgcgttcacca 479 Score = 52.0 bits (26), Expect = 0.005 Identities = 89/110 (80%) Strand = Plus / Plus Query: 709 ttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgatgag 768 ||||| ||||||||| | | ||||||||| ||| |||||||| | ||| | || || ||| Sbjct: 701 ttctgcggctacatcgtgtacgacacggataacctcatcaagaggtactcctacgacgag 760 Query: 769 tacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 || ||||||| ||||| | |||||||||||| | |||||||| ||||| Sbjct: 761 tatgtctgggccgccgtcgcgctctacctcgacgtcatcaacctcttcct 810
>ref|NM_001057781.1| Oryza sativa (japonica cultivar-group) Os03g0745600 (Os03g0745600) mRNA, complete cds Length = 690 Score = 93.7 bits (47), Expect = 1e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 313 ttcttcgtctcctccaacgccggcttcggcctctacatcttcctcctcatcctgcccctc 372 |||||||||||| || ||||||||||| |||||||||||||||| ||||||| ||| || Sbjct: 148 ttcttcgtctccacccccgccggcttcgccctctacatcttcctcatcatcctccccttc 207 Query: 373 atcgtgctctgccccctgcgctactaccaccagaagcaccccgtcaacctcatcctgctc 432 |||||||| ||||| || ||||||| ||||| ||||| || |||||| ||||||| Sbjct: 208 atcgtgctttgcccgctctactactactaccagcgccacccggtgaacctcctcctgctg 267 Query: 433 ggcatcttcaccgtctccatcagcttcgccgtcggcatgacgtgcgccttcacca 487 | | ||||||| | | |||||||||||||| ||| | || ||||| ||||||| Sbjct: 268 gccctcttcacggcggcgatcagcttcgccgtgggcctcacctgcgcgttcacca 322 Score = 52.0 bits (26), Expect = 0.005 Identities = 89/110 (80%) Strand = Plus / Plus Query: 709 ttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgatgag 768 ||||| ||||||||| | | ||||||||| ||| |||||||| | ||| | || || ||| Sbjct: 544 ttctgcggctacatcgtgtacgacacggataacctcatcaagaggtactcctacgacgag 603 Query: 769 tacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 || ||||||| ||||| | |||||||||||| | |||||||| ||||| Sbjct: 604 tatgtctgggccgccgtcgcgctctacctcgacgtcatcaacctcttcct 653
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 313 ttcttcgtctcctccaacgccggcttcggcctctacatcttcctcctcatcctgcccctc 372 |||||||||||| || ||||||||||| |||||||||||||||| ||||||| ||| || Sbjct: 130150 ttcttcgtctccacccccgccggcttcgccctctacatcttcctcatcatcctccccttc 130091 Query: 373 atcg 376 |||| Sbjct: 130090 atcg 130087 Score = 52.0 bits (26), Expect = 0.005 Identities = 89/110 (80%) Strand = Plus / Minus Query: 709 ttctgtggctacatcatcttcgacacggacaacatcatcaagcgctacacgtatgatgag 768 ||||| ||||||||| | | ||||||||| ||| |||||||| | ||| | || || ||| Sbjct: 129657 ttctgcggctacatcgtgtacgacacggataacctcatcaagaggtactcctacgacgag 129598 Query: 769 tacatctgggctgccgtgtccctctacctcgacattatcaacctgttcct 818 || ||||||| ||||| | |||||||||||| | |||||||| ||||| Sbjct: 129597 tatgtctgggccgccgtcgcgctctacctcgacgtcatcaacctcttcct 129548
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttcctgtt 608 |||||| || |||||||||| |||||| |||| ||||||||||||||||||||| |||| Sbjct: 121162 ctacacattttgggctgcaagtagaggctatgatttcaacttccttggccccttcttgtt 121103 Query: 609 tgg 611 ||| Sbjct: 121102 tgg 121100
>ref|NM_116196.1| Arabidopsis thaliana glutamate binding (AT3G63310) mRNA, complete cds Length = 720 Score = 65.9 bits (33), Expect = 3e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttcctgttt 609 |||||||||||||| || || ||||||||||||||||||||||| || || ||| |||| Sbjct: 415 tacactttctgggcggccaaaagaggccatgacttcaacttcctcggacctttcttgttc 474 Query: 610 ggagctcttatggtgctgatgatgttctcacttatccagatctttttcccactgggcaag 669 || ||| | || || || ||| |||| || | |||||||| | ||||| | || ||| Sbjct: 475 ggtgctgtcattgtcctcatggtgttttccttcatccagattctcttccctttaggaaag 534 Query: 670 atctccgtcatgatctatggggccgtggcgtcgatcatcttctgtggctacat 722 ||||| || ||||||||||| |||| || |||||||||||||||||||| Sbjct: 535 atctctgtgatgatctatggttgtttggcatccatcatcttctgtggctacat 587
>gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds Length = 892 Score = 65.9 bits (33), Expect = 3e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttcctgttt 609 |||||||||||||| || || ||||||||||||||||||||||| || || ||| |||| Sbjct: 505 tacactttctgggcggccaaaagaggccatgacttcaacttcctcggacctttcttgttc 564 Query: 610 ggagctcttatggtgctgatgatgttctcacttatccagatctttttcccactgggcaag 669 || ||| | || || || ||| |||| || | |||||||| | ||||| | || ||| Sbjct: 565 ggtgctgtcattgtcctcatggtgttttccttcatccagattctcttccctttaggaaag 624 Query: 670 atctccgtcatgatctatggggccgtggcgtcgatcatcttctgtggctacat 722 ||||| || ||||||||||| |||| || |||||||||||||||||||| Sbjct: 625 atctctgtgatgatctatggttgtttggcatccatcatcttctgtggctacat 677
>gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds Length = 720 Score = 65.9 bits (33), Expect = 3e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttcctgttt 609 |||||||||||||| || || ||||||||||||||||||||||| || || ||| |||| Sbjct: 415 tacactttctgggcggccaaaagaggccatgacttcaacttcctcggacctttcttgttc 474 Query: 610 ggagctcttatggtgctgatgatgttctcacttatccagatctttttcccactgggcaag 669 || ||| | || || || ||| |||| || | |||||||| | ||||| | || ||| Sbjct: 475 ggtgctgtcattgtcctcatggtgttttccttcatccagattctcttccctttaggaaag 534 Query: 670 atctccgtcatgatctatggggccgtggcgtcgatcatcttctgtggctacat 722 ||||| || ||||||||||| |||| || |||||||||||||||||||| Sbjct: 535 atctctgtgatgatctatggttgtttggcatccatcatcttctgtggctacat 587
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttcct 593 |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 10620 tacactttctgggcggccaaaagaggccatgacttcaacttcct 10577
>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2 Length = 75106 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttcct 593 |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 56003 tacactttctgggcggccaaaagaggccatgacttcaacttcct 55960
>ref|NM_001065560.1| Oryza sativa (japonica cultivar-group) Os07g0177200 (Os07g0177200) mRNA, complete cds Length = 921 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttc 603 |||||| |||||||| || ||||||||||||||||||| |||||| |||||||| Sbjct: 439 ctacacattctgggcggccaagagaggccatgacttcagcttcctccgccccttc 493
>dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070O07, full insert sequence Length = 922 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 549 ctacactttctgggctgcaaagagaggccatgacttcaacttccttggccccttc 603 |||||| |||||||| || ||||||||||||||||||| |||||| |||||||| Sbjct: 440 ctacacattctgggcggccaagagaggccatgacttcagcttcctccgccccttc 494
>gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence Length = 1241 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 745 atcaagcgctacacgtatgatgagtacatctgggctgc 782 |||||||||||||| || |||||||||||||||||||| Sbjct: 640 atcaagcgctacacttacgatgagtacatctgggctgc 677
>ref|NM_116503.1| Arabidopsis thaliana glutamate binding (AT4G02690) mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 647 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 704
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Minus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 23660 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 23603
>gb|AY735634.1| Arabidopsis thaliana chromosome 4 hypothetical protein AT4G02690 mRNA, complete cds, alternatively spliced Length = 1498 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 1112 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 1169
>gb|AY735633.1| Arabidopsis thaliana chromosome 4 hypothetical protein AT4G02690 mRNA, complete cds, alternatively spliced Length = 1356 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 951 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 1008
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 136 gcgccggacctcgacctcgaggccgg 161 |||||||||||||||||||||||||| Sbjct: 1918060 gcgccggacctcgacctcgaggccgg 1918085
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 33193 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 33250
>gb|AY924811.1| Arabidopsis thaliana hypothetical protein (At4g02690) mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 acacgtatgatgagtacatctgggctgccgtgtccctctacctcgacattatcaacct 812 |||||||||||||||| || ||||| || || || |||||||| ||||| |||||||| Sbjct: 647 acacgtatgatgagtatatttgggcagcggtttcactctacctagacatcatcaacct 704
>dbj|AP006429.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17D07, TM0322, complete sequence Length = 109570 Score = 50.1 bits (25), Expect = 0.018 Identities = 73/89 (82%) Strand = Plus / Plus Query: 526 gtggtggtgatcagcttgactgcctacactttctgggctgcaaagagaggccatgacttc 585 ||||||||||||||| | || |||||| || ||||| |||| |||||| ||||| ||| Sbjct: 78262 gtggtggtgatcagcctaacactctacacattttgggccgcaaggagaggtcatgatttc 78321 Query: 586 aacttccttggccccttcctgtttggagc 614 | ||| | ||||||||| |||||||||| Sbjct: 78322 agctttttgggccccttcttgtttggagc 78350
>emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 998 Score = 48.1 bits (24), Expect = 0.071 Identities = 37/40 (92%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaact 589 |||||||||||||| |||| ||||||||||||||||||| Sbjct: 534 tacactttctgggcgccaaa-agaggccatgacttcaact 572
>gb|AC189511.1| Brassica rapa subsp. pekinensis clone KBrB089H07, complete sequence Length = 140025 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 93459 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 93505
>ref|NM_117636.2| Arabidopsis thaliana unknown protein (AT4G15470) mRNA, complete cds Length = 1170 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 560 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 606
>gb|AY811375.1| Schistosoma japonicum SJCHGC09479 protein mRNA, partial cds Length = 1396 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 796 ctcgacattatcaacctgttcct 818 ||||||||||||||||||||||| Sbjct: 1225 ctcgacattatcaacctgttcct 1247
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 cggccgccgtcgcgggcttcgtcgtca 292 ||||||||||||||| ||||||||||| Sbjct: 614591 cggccgccgtcgcggacttcgtcgtca 614617
>gb|AF319555.1| Epinephelus tauvina nervous necrosis virus segment RNA1 protein A and protein B2 mRNAs, complete cds Length = 3103 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 819 gaatctgatgcagattctgcgtg 841 ||||||||||||||||||||||| Sbjct: 738 gaatctgatgcagattctgcgtg 760
>ref|XM_628117.1| Cryptosporidium parvum Iowa II ER lumen protein retaining (KDEL) RECEPTOR 1 (cgd1_3010), partial mRNA Length = 855 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 910 aaattcatggatgcctgcagata 932 ||||||||||||||||||||||| Sbjct: 510 aaattcatggatgcctgcagata 532
>gb|AY097356.1| Arabidopsis thaliana AT4g15470/dl3775w mRNA, complete cds Length = 771 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 466 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 512
>gb|AY056115.1| Arabidopsis thaliana AT4g15470/dl3775w mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 511 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 557
>gb|AY050443.1| Arabidopsis thaliana AT4g15470/dl3775w mRNA, complete cds Length = 983 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 511 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 557
>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4 Length = 205065 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 13737 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 13783
>gb|AF326776.1| Epinephelus tauvina nervous necrosis virus segment RNA1, complete sequence Length = 3007 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 819 gaatctgatgcagattctgcgtg 841 ||||||||||||||||||||||| Sbjct: 683 gaatctgatgcagattctgcgtg 705
>emb|BX826378.1|CNS0A385 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 529 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 575
>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41 Length = 197419 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 550 tacactttctgggctgcaaagagaggccatgacttcaacttccttgg 596 |||||||||||||||||||||| || | ||||||| ||||||||| Sbjct: 163210 tacactttctgggctgcaaagaagggaaaagacttcagcttccttgg 163256
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 cgccgtcgcgggcttcgtcgtcaagg 295 ||||||||||||| |||||||||||| Sbjct: 4252209 cgccgtcgcgggcgtcgtcgtcaagg 4252234
>ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG03089.4) partial mRNA Length = 849 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 793 tacctcgacattatcaacctgttcct 818 ||||||||||| |||||||||||||| Sbjct: 784 tacctcgacatcatcaacctgttcct 809
>gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, complete sequence Length = 181079 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 tcttcctcctcatcctgcccct 371 |||||||||||||||||||||| Sbjct: 3053 tcttcctcctcatcctgcccct 3032
>ref|XM_662918.1| Cryptosporidium hominis TU502 ER lumen protein retaining receptor-like protein (Chro.10334) partial mRNA Length = 855 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 911 aattcatggatgcctgcagata 932 |||||||||||||||||||||| Sbjct: 511 aattcatggatgcctgcagata 532
>gb|AC025881.6| Homo sapiens chromosome 8, clone RP11-393K19, complete sequence Length = 176048 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 tcttcctcctcatcctgcccct 371 |||||||||||||||||||||| Sbjct: 139585 tcttcctcctcatcctgcccct 139564
>emb|BX681417.10| Zebrafish DNA sequence from clone DKEY-161L11 in linkage group 2, complete sequence Length = 233760 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 901 catatcagaaaattcatggatg 922 |||||||||||||||||||||| Sbjct: 224196 catatcagaaaattcatggatg 224217
>ref|NM_011417.2| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (Smarca4), mRNA gb|BC079560.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, mRNA (cDNA clone MGC:90778 IMAGE:30533489), complete cds Length = 5521 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 4044 catcttcctcctcatcctgctcctc 4020
>gb|BC026672.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, mRNA (cDNA clone IMAGE:5025538), partial cds Length = 2789 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 1193 catcttcctcctcatcctgctcctc 1169
>gb|BC060229.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, mRNA (cDNA clone MGC:77959 IMAGE:6840009), complete cds Length = 5417 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 3938 catcttcctcctcatcctgctcctc 3914
>gb|BC023186.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, mRNA (cDNA clone IMAGE:4945540), partial cds Length = 2114 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 633 catcttcctcctcatcctgctcctc 609
>dbj|AK147285.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1007E14 product:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, full insert sequence Length = 5456 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 3998 catcttcctcctcatcctgctcctc 3974
>dbj|AK147047.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920091F08 product:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, full insert sequence Length = 2819 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 1360 catcttcctcctcatcctgctcctc 1336
>dbj|AK160825.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:3425403L20 product:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, full insert sequence Length = 6280 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 3948 catcttcctcctcatcctgctcctc 3924
>dbj|AK166837.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015P12 product:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, full insert sequence Length = 5405 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 3949 catcttcctcctcatcctgctcctc 3925
>gb|AE006016.1| Caulobacter crescentus CB15 section 342 of 359 of the complete genome Length = 10963 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gacctcgacctcgaggccggc 162 ||||||||||||||||||||| Sbjct: 1584 gacctcgacctcgaggccggc 1604
>gb|AC055714.11| Homo sapiens 3 BAC RP11-85P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167788 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 896 ttgtgcatatcagaaaattca 916 ||||||||||||||||||||| Sbjct: 47444 ttgtgcatatcagaaaattca 47464
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gacctcgacctcgaggccggc 162 ||||||||||||||||||||| Sbjct: 22107814 gacctcgacctcgaggccggc 22107834
>gb|S68108.1| brg1=brahma homolog [mice, embryo, erythroleukemia cell line CB7, mRNA Partial, 3513 nt] Length = 3513 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 2010 catcttcctcctcatcctgctcctc 1986
>gb|S75174.1| E2F-4=transcription factor [human, Nalm6 and HeLa cells, mRNA, 1539 nt] Length = 1539 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 agccaggccaggccaggcgcg 117 ||||||||||||||||||||| Sbjct: 31 agccaggccaggccaggcgcg 11
>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11 Length = 344249 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 725 tcttcgacacggacaacatcatcaa 749 |||||||| |||||||||||||||| Sbjct: 17834 tcttcgacccggacaacatcatcaa 17858
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 tcgtctcctccaacgccggct 337 ||||||||||||||||||||| Sbjct: 131040 tcgtctcctccaacgccggct 131060
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 gctcgccatgacggccgccgtcgcg 279 ||||||| ||||||||||||||||| Sbjct: 226983 gctcgccctgacggccgccgtcgcg 227007
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gacctcgacctcgaggccggc 162 ||||||||||||||||||||| Sbjct: 6295 gacctcgacctcgaggccggc 6315
>emb|X99723.1|RNBRAHMA R.norvegicus mRNA for homologue of brahma protein, C terminal Length = 416 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 catcttcctcctcatcctgcccctc 372 |||||||||||||||||||| |||| Sbjct: 28 catcttcctcctcatcctgctcctc 4
>gb|AC005230.1|AC005230 Homo sapiens PAC clone RP5-1163L11 from 14q24.3, complete sequence Length = 112902 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 tcttatggtgctgatgatgtt 635 ||||||||||||||||||||| Sbjct: 85744 tcttatggtgctgatgatgtt 85724
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 273 cgtcgcgggcttcgtcgtcaaggtccccgccgt 305 ||||||||||||||||||| |||| ||||||| Sbjct: 958738 cgtcgcgggcttcgtcgtcgtggtcgccgccgt 958706
>gb|AF250378.1|AF250378 Homo sapiens E2F transcription factor 4 (E2F4) gene, complete cds Length = 5988 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 agccaggccaggccaggcgcg 117 ||||||||||||||||||||| Sbjct: 38 agccaggccaggccaggcgcg 18
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 785 tgtccctctacctcgacatta 805 ||||||||||||||||||||| Sbjct: 181329 tgtccctctacctcgacatta 181309
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aggcgccggacctcgacctcg 154 ||||||||||||||||||||| Sbjct: 153259 aggcgccggacctcgacctcg 153239
>emb|BX321907.4| Mouse DNA sequence from clone RP23-207D8 on chromosome 4, complete sequence Length = 3994 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 agggagccaggccaggccagg 113 ||||||||||||||||||||| Sbjct: 3726 agggagccaggccaggccagg 3706
>gb|U15641.1|HSU15641 Human transcription factor E2F-4 mRNA, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 agccaggccaggccaggcgcg 117 ||||||||||||||||||||| Sbjct: 38 agccaggccaggccaggcgcg 18
>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete sequence Length = 251930 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 agggagccaggccaggccagg 113 ||||||||||||||||||||| Sbjct: 1732 agggagccaggccaggccagg 1712 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 166,574,871 Number of extensions: 8994891 Number of successful extensions: 218372 Number of sequences better than 10.0: 81 Number of HSP's gapped: 218344 Number of HSP's successfully gapped: 120 Length of query: 1156 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1133 Effective length of database: 18,503,978,556 Effective search space: 20965007703948 Effective search space used: 20965007703948 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
