>Q6DGZ0:CCD75_DANRE Coiled-coil domain-containing protein 75 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 262
 Score = 40.8 bits (94), Expect = 0.007
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
 Frame = +3

Query: 327 AGMAEAIPESNVGFKMLKQMGYDPAT----RGAGS-EPVGIEIRRSRAGLGAEPDASVAP 491
           A +  +I   N GF +L++MGY         GAG  EPV + I+  R G+G E    V  
Sbjct: 62  AALQSSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIGME---EVKK 118

Query: 492 LPQSPEPKTXXXXXXXXXXXXXMVVE-LRSRKSTQWKGRRLVWDYRKAEAVLTQLENRE 665
                E +                +E  R RK T+ + R+   D RK++    QL+N++
Sbjct: 119 RKADEELQNYRRKVHMKQHLEKKSIEDFRVRKRTEREERQTQGDLRKSQRACEQLDNQK 177

>Q7S1Y0:RNA14_NEUCR mRNA 3'-end-processing protein rna-14 - Neurospora crassa|
          Length = 1167

 Score = 34.7 bits (78), Expect = 0.52
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 496 GSGATEASGSAPSPARERRISIPTGSEPAPRVA 398
           GSGA+ + GSAP+PA     + P    PAP+ A
Sbjct: 159 GSGASSSGGSAPAPASASATAAPQSHSPAPQTA 191

>Q8N302:AGGF1_HUMAN Angiogenic factor with G patch and FHA domains 1 - Homo sapiens|
           (Human)
          Length = 714

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = +3

Query: 327 AGMAEAIPESNVGFKMLKQMGYDPATRGAGSE------PVGIEIRRSRAGLGAEPDAS 482
           A +   I +SN G KML++MG+     G G +      P+ +++RR+ AGLG    +S
Sbjct: 611 ASVHSEITDSNKGRKMLEKMGWKKG-EGLGKDGGGMKTPIQLQLRRTHAGLGTGKPSS 667

>Q7TN31:AGGF1_MOUSE Angiogenic factor with G patch and FHA domains 1 - Mus musculus|
           (Mouse)
          Length = 711

 Score = 33.1 bits (74), Expect = 1.5
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = +3

Query: 327 AGMAEAIPESNVGFKMLKQMGYDPATRGAGSE------PVGIEIRRSRAGLGAEPDASV 485
           A +   I +SN G KML++MG+     G G +      P+ +++RR+ AGLG    +S+
Sbjct: 608 ASVHSEITDSNKGRKMLEKMGWKRG-EGLGKDGGGMKTPIQLQLRRTHAGLGTGKLSSI 665

>Q6DF57:CCD75_XENTR Coiled-coil domain-containing protein 75 - Xenopus tropicalis|
           (Western clawed frog) (Silurana tropicalis)
          Length = 261

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +3

Query: 339 EAIPESNVGFKMLKQMGYDPAT----RGAGS-EPVGIEIRRSRAGLGAE 470
           EA+   N GF +L++MGY        +G G  EP+ + I+  R+G+G E
Sbjct: 66  EALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGIGHE 114

>P41593:PTHR1_MOUSE Parathyroid hormone/parathyroid hormone-related peptide receptor|
           precursor - Mus musculus (Mouse)
          Length = 591

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 513 WVPVTAAAAPQKHLAPPRVRPESGGSRFRPARSRHHGLP 397
           W P + +  P+K  AP +  PES  ++  P  SR  G P
Sbjct: 69  WTPASTSGKPRKEKAPGKFYPESKENKDVPTGSRRRGRP 107

>Q7TQC7:GPTC2_MOUSE G patch domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 527

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +3

Query: 336 AEAIPESNVGFKMLKQMGYDPATRGAG------SEPVGIEIRRSRAGLG--AEPDASVAP 491
           A+ I ESN+G +ML+ MG+ P + G G      +EPV    R    GLG      +  +P
Sbjct: 461 AQPILESNIGNRMLQSMGWTPGS-GLGRDGRGIAEPVQAVQRPKGLGLGFPLPKSSPTSP 519

Query: 492 LPQSPEP 512
            P S  P
Sbjct: 520 APTSGNP 526

>Q06152:YL271_YEAST Uncharacterized protein YLR271W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 274

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
 Frame = +3

Query: 363 GFKMLKQMGYDP-----ATRGAGSEPVGIEIRRSRAGLGAE-PDAS 482
           G+KM++ MGY       +   A  EP+ +EI   R G+ AE PD S
Sbjct: 45  GYKMMENMGYKEGETLGSNESALKEPIKVEINTKRRGIRAEKPDPS 90

>Q9NW75:GPTC2_HUMAN G patch domain-containing protein 2 - Homo sapiens (Human)|
          Length = 528

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = +3

Query: 336 AEAIPESNVGFKMLKQMGYDPATRGAG------SEPVGIEIRRSRAGLGAEPDASVAPLP 497
           A+ I E+N+G +ML+ MG+ P + G G      SEP+    R    GLG        PLP
Sbjct: 462 AQPILENNIGNRMLQNMGWTPGS-GLGRDGKGISEPIQAMQRPKGLGLG-------FPLP 513

Query: 498 QSPEPKT 518
           +S    T
Sbjct: 514 KSTSATT 520

>Q91YE7:RBM5_MOUSE RNA-binding protein 5 - Mus musculus (Mouse)|
          Length = 815

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = +3

Query: 339 EAIPESNVGFKMLKQMGYDPATRGAG------SEPVGIEIRRSRAGLGAEPDA 479
           + I  SN+G KML+ MG+   + G G      + P+  ++R   AGLGA+  A
Sbjct: 739 DGIDHSNIGNKMLQAMGWREGS-GLGRKCQGITAPIEAQVRLKGAGLGAKGSA 790

>P52756:RBM5_HUMAN RNA-binding protein 5 - Homo sapiens (Human)|
          Length = 815

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = +3

Query: 339 EAIPESNVGFKMLKQMGYDPATRGAG------SEPVGIEIRRSRAGLGAEPDA 479
           + I  SN+G KML+ MG+   + G G      + P+  ++R   AGLGA+  A
Sbjct: 739 DGIDHSNIGNKMLQAMGWREGS-GLGRKCQGITAPIEAQVRLKGAGLGAKGSA 790

>Q1RMU5:RBM5_BOVIN RNA-binding protein 5 - Bos taurus (Bovine)|
          Length = 815

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = +3

Query: 339 EAIPESNVGFKMLKQMGYDPATRGAG------SEPVGIEIRRSRAGLGAEPDA 479
           + I  SN+G KML+ MG+   + G G      + P+  ++R   AGLGA+  A
Sbjct: 739 DGIDHSNIGNKMLQAMGWREGS-GLGRKCQGITAPIEAQVRLKGAGLGAKGSA 790

>Q561R1:CENPT_RAT Centromere protein T - Rattus norvegicus (Rat)|
          Length = 518

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +3

Query: 396 PATRGAGSEPVGIEIRRSRAGLGAEPDASVAPLPQSPE 509
           P T   G+ P   + + SRAG GA P     P PQSPE
Sbjct: 292 PRTPSTGTRP---QSQMSRAGFGASPLPFSEPQPQSPE 326

>Q4V8W7:UBTD1_DANRE Ubiquitin domain-containing protein 1 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 227

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
 Frame = +3

Query: 402 TRGAGSEPVGIEIRRSRAGLGAEPDASVAPLPQSPEPKTXXXXXXXXXXXXXMVVELRSR 581
           TRG GS       +R R G   EP     P  +S  P T                +LRS+
Sbjct: 12  TRGRGSRT-----QRKRGGRN-EPLKKDKPKWKSDYPMTEG--------------QLRSK 51

Query: 582 KSTQW------KGRRLVWDYRKAEAVLTQLENREVEPPAADG 689
           +   W      +GR+ +WD  KA AV  +  + E+     DG
Sbjct: 52  RDEFWDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDG 93

>Q8CH09:SFR14_MOUSE Putative splicing factor, arginine/serine-rich 14 - Mus musculus|
            (Mouse)
          Length = 1067

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +3

Query: 339  EAIPESNVGFKMLKQMGYDPATRGAGS------EPVGIEIRRSRAGLGAE 470
            + + + NVGF+ML++MG+     G GS      EPV +       GLGA+
Sbjct: 992  QKLTDKNVGFQMLQKMGWKEG-HGLGSLGKGIREPVSVGALSEGEGLGAD 1040


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 104,595,742
Number of extensions: 1807596
Number of successful extensions: 6839
Number of sequences better than 10.0: 15
Number of HSP's gapped: 6830
Number of HSP's successfully gapped: 15
Length of query: 294
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 182
Effective length of database: 69,965,399
Effective search space: 12733702618
Effective search space used: 12733702618
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)