ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf127b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063887:Os08g0104100 251 6e-67
2AK061550:Os08g0104100 251 6e-67
3AK072834:Os05g0432500 164 1e-40
4AK072948:Os08g0104100 83 4e-16
5Os12g0477100:Os12g0477100 33 0.45
6AK065129:Os11g0207100 27 4.5
7AK061224:Os01g0170000 29 4.9
8AK060684:Os01g0874300 29 6.4

>AK063887:Os08g0104100 |
          Length = 180
 Score =  251 bits (641), Expect = 6e-67
 Identities = 120/156 (76%), Positives = 134/156 (85%)
 Frame = +2

Query: 107 LNEHADVVAELFGRVSTELRGGFGPAVDSFVGFFHAVDWKEPWLIGMISFHAILLLVTII 286
           LNEHADVVAELFGRVS++LR GF PA+DSF+GFFHAVDWKEPWLI M+ FHAILLLVTII
Sbjct: 25  LNEHADVVAELFGRVSSDLRSGFRPALDSFLGFFHAVDWKEPWLISMLIFHAILLLVTII 84

Query: 287 SRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGPXXXX 466
           SRRN+NFQLILSA TFSGVFLAE++NTFLGQ+WKSFSSQNYFDPQGLFISV+WSGP    
Sbjct: 85  SRRNVNFQLILSALTFSGVFLAERINTFLGQHWKSFSSQNYFDPQGLFISVVWSGPLLLI 144

Query: 467 XXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574
                       C+LMVRWKRAEL+HRARE R+KQ+
Sbjct: 145 TILILVNTLVTLCLLMVRWKRAELRHRAREVRNKQD 180



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>AK061550:Os08g0104100 |
          Length = 180

 Score =  251 bits (641), Expect = 6e-67
 Identities = 120/156 (76%), Positives = 134/156 (85%)
 Frame = +2

Query: 107 LNEHADVVAELFGRVSTELRGGFGPAVDSFVGFFHAVDWKEPWLIGMISFHAILLLVTII 286
           LNEHADVVAELFGRVS++LR GF PA+DSF+GFFHAVDWKEPWLI M+ FHAILLLVTII
Sbjct: 25  LNEHADVVAELFGRVSSDLRSGFRPALDSFLGFFHAVDWKEPWLISMLIFHAILLLVTII 84

Query: 287 SRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGPXXXX 466
           SRRN+NFQLILSA TFSGVFLAE++NTFLGQ+WKSFSSQNYFDPQGLFISV+WSGP    
Sbjct: 85  SRRNVNFQLILSALTFSGVFLAERINTFLGQHWKSFSSQNYFDPQGLFISVVWSGPLLLI 144

Query: 467 XXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574
                       C+LMVRWKRAEL+HRARE R+KQ+
Sbjct: 145 TILILVNTLVTLCLLMVRWKRAELRHRAREVRNKQD 180



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>AK072834:Os05g0432500 |
          Length = 163

 Score =  164 bits (415), Expect = 1e-40
 Identities = 77/153 (50%), Positives = 102/153 (66%)
 Frame = +2

Query: 116 HADVVAELFGRVSTELRGGFGPAVDSFVGFFHAVDWKEPWLIGMISFHAILLLVTIISRR 295
           H D V+ L   +S ELR G GPA DS + F  AVDW EPWLI ++ FHA LLL  +  RR
Sbjct: 11  HLDQVSGLVQALSAELRRGIGPAADSLLAFVRAVDWTEPWLICLMVFHATLLLTAVGLRR 70

Query: 296 NINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGPXXXXXXX 475
           N NFQL +    +SGV+LAEK+N+++ ++WKS +++NYFD  G+F+SV+WSGP       
Sbjct: 71  NANFQLFMLFLAYSGVYLAEKINSYMAEHWKSIATRNYFDRAGVFVSVVWSGPLIFISMV 130

Query: 476 XXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574
                    C LMV+WKRAEL+HRA+ AR KQ+
Sbjct: 131 IVVSSLITLCRLMVKWKRAELRHRAQLARDKQD 163



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>AK072948:Os08g0104100 |
          Length = 90

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = +2

Query: 335 SGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGP 454
           SGVFLAE++NTFLGQ+WKSFSSQNYFDPQGLFISV+WSGP
Sbjct: 15  SGVFLAERINTFLGQHWKSFSSQNYFDPQGLFISVVWSGP 54



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>Os12g0477100:Os12g0477100 |
          Length = 802

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 23/84 (27%), Positives = 37/84 (44%)
 Frame = -2

Query: 631 DQQLNLLPHNRSAGMAASSFLLATGLTSAVLELGPFPPYHQHAERHKGVHQNKYRNQEQG 452
           ++ +NLLP  RS  M     L+ T LT    EL    PY      H+   +   R   +G
Sbjct: 283 EELINLLPSGRSGCM----ILITTRLTKIASELKTLEPYEVPKLPHEECRKIFVRYAFRG 338

Query: 451 TRPHDRDEEALGIKVILA*EALPV 380
            +  DR+   +G  ++   + LP+
Sbjct: 339 EKAKDRELLKIGESIVQKCDGLPL 362



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>AK065129:Os11g0207100 |
          Length = 933

 Score = 26.6 bits (57), Expect(2) = 4.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 538 ELGPFPPYHQHAERHKGVHQNKYRNQEQGTRPHDRDEEAL 419
           +LG      QH  +H+  HQ++ + Q+Q  + HD   + L
Sbjct: 876 QLGQLQQQQQHQHQHQ--HQHQQQQQQQQQQQHDLGNQLL 913



 Score = 21.2 bits (43), Expect(2) = 4.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 422 LGDQSNSGLRSSSSF 378
           LG+Q  SGLR+++SF
Sbjct: 908 LGNQLLSGLRAANSF 922



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>AK061224:Os01g0170000 |
          Length = 338

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 460 PDYDTYSGEHPCDALHADGKVEKG 531
           PD+D +   HPC A HA  +   G
Sbjct: 68  PDWDMFQSTHPCAAFHAASRAVSG 91



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>AK060684:Os01g0874300 |
          Length = 287

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 610 PHNRSAGMAASSFLLATGLTSAVLELGPFPPYHQHAERHKGVH 482
           P +  +  AA+S L  T  T+A   L P PP  QH   H  VH
Sbjct: 128 PVSAGSSAAAASGLTTTASTAAFPSLAPAPPPQQH-RLHNPVH 169


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,785,851
Number of extensions: 595644
Number of successful extensions: 1590
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1581
Number of HSP's successfully gapped: 9
Length of query: 354
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 252
Effective length of database: 11,315,673
Effective search space: 2851549596
Effective search space used: 2851549596
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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