>LOC_Os08g01350:12008.t00035:unspliced-genomic transmembrane protein 18, putative, expressed|
Length = 2904
Score = 95.9 bits (203), Expect(4) = 5e-63
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = +2 / +1
Query: 335 SGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGP 454
SGVFLAE++NTFLGQ+WKSFSSQNYFDPQGLFISV+WSGP
Sbjct: 2164 SGVFLAERINTFLGQHWKSFSSQNYFDPQGLFISVVWSGP 2283
Score = 88.1 bits (186), Expect(4) = 5e-63
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +2 / +1
Query: 107 LNEHADVVAELFGRVSTELRGGFGPAVDSFVGFFHAVDWK 226
LNEHADVVAELFGRVS++LR GF PA+DSF+GFFHAVDWK
Sbjct: 247 LNEHADVVAELFGRVSSDLRSGFRPALDSFLGFFHAVDWK 366
Score = 73.0 bits (153), Expect(4) = 5e-63
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +2 / +3
Query: 224 KEPWLIGMISFHAILLLVTIISRRNINFQLILSAFT 331
+EPWLI M+ FHAILLLVTIISRRN+NFQLILSA T
Sbjct: 1419 QEPWLISMLIFHAILLLVTIISRRNVNFQLILSALT 1526
Score = 53.8 bits (111), Expect(4) = 5e-63
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +2 / +1
Query: 503 CMLMVRWKRAELKHRAREARSKQE* 577
C+LMVRWKRAEL+HRARE R+KQ+*
Sbjct: 2416 CLLMVRWKRAELRHRAREVRNKQD* 2490
Score = 101 bits (215), Expect(5) = 1e-62
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = -3 / -2
Query: 483 TRISIVIRSRGPDHMTEMKRPWGSK*FWLEKLFQFCPKNVFSFSARNTPE 334
T+I IVI+ RGPD TEM RPWGSK*FWLEKLFQ CPKNVF SARNTPE
Sbjct: 2312 TKIRIVIKRRGPDQTTEMNRPWGSK*FWLEKLFQCCPKNVFILSARNTPE 2163
Score = 67.5 bits (141), Expect(5) = 1e-62
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -3 / -2
Query: 573 SCLLRASRARCLSSALFHLTISMQSVTRVFT 481
SCLLR SRARCLSSALFHLTIS QSVTRVFT
Sbjct: 2486 SCLLRTSRARCLSSALFHLTISRQSVTRVFT 2394
Score = 58.3 bits (121), Expect(5) = 1e-62
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / -2
Query: 331 CEG*QNKLEIDVPPGDDGYQ*QNGMETYHADQPRFL 224
C *Q+KLE+D+ P DD YQ QNGM+ HADQPRFL
Sbjct: 1526 C*S*QDKLEVDISP*DDCYQQQNGMKN*HADQPRFL 1419
Score = 57.0 bits (118), Expect(5) = 1e-62
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -3 / -2
Query: 228 SFQSTAWKKPTKESTAGPNPPRSSVETRPK 139
+FQSTAWKKP KES AG NP R S ETRPK
Sbjct: 368 TFQSTAWKKPRKESRAGRNPERRSEETRPK 279
Score = 45.1 bits (92), Expect(5) = 1e-62
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 160 LGGDTAEELGYHVSVLVQRRTHLLHRSPN 74
+GGD +EL +HV VLVQR HL HR+P+
Sbjct: 300 VGGDAPKELRHHVGVLVQRLPHLTHRAPH 214
Score = 72.5 bits (152), Expect(3) = 2e-30
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = -2 / -1
Query: 484 HQNKYRNQEQGTRPHDRDEEALGIKVILA*EALPVLS*ECV*FLRKEYTRKC 329
+QNK R Q++G RP + +E+ LGIK+ILA*EALPVL *EC+ L ++YTR C
Sbjct: 2313 YQNKDRYQKEGPRPDN*NEQTLGIKIILA*EALPVLP*ECIYSLSEKYTRNC 2158
Score = 55.6 bits (115), Expect(3) = 2e-30
Identities = 24/33 (72%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 578 IIPACYGPHERGA*ARPFSTLPSACRASQGCSP 480
I PACY PHE GA*A PFS LPSA R Q CSP
Sbjct: 2491 INPACYEPHEHGA*APPFSILPSAGRV*QECSP 2393
Score = 51.5 bits (106), Expect(3) = 2e-30
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -1 / -1
Query: 353 PQGIHQKM*RLTK*VGN*CSSWR*WLPVAEWHGNLSCRSTKVP 225
P+ I M +LT+*VG+* S R* LP AEWH L+C STKVP
Sbjct: 1548 PRQIKTYMLKLTR*VGS*HFSLR*LLPAAEWHEKLTC*STKVP 1420
Score = 60.2 bits (125), Expect(3) = 1e-27
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = +3 / +2
Query: 333 FLVYSLRRN*THS*DKTGRASQARITLIPKASSSRSCGLVPCS*LRYLFW* 485
FLVY R * HS* TGRASQARI LIPK S + GL P * R LFW*
Sbjct: 2162 FLVYFSLRE*IHS*GNTGRASQARIILIPKVCSFQLSGLGPSF**RSLFW* 2314
Score = 59.7 bits (124), Expect(3) = 1e-27
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1 / +2
Query: 226 GTLVDRHDKFPCHSATGNHHLQEEHQFPTYFVSLHI 333
GTLVD+H F CHSA GN+HL+E+ Q PTY VS ++
Sbjct: 1421 GTLVDQHVNFSCHSAAGNNHLKEKCQLPTYLVSFNM 1528
Score = 50.1 bits (103), Expect(3) = 1e-27
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 481 GEHPCDALHADGKVEKGRAQAPRS*GP*QAGMMM 582
GEH C L ADGK+EKG A AP S*G *QAG+++
Sbjct: 2394 GEHSCHTLPADGKMEKGGA*APCS*GS*QAGLIL 2495
Score = 67.0 bits (140), Expect(2) = 1e-17
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3 / -3
Query: 375 PKNVFSFSARNTPENVKADKISWKLMFLLEMMVTSSRMAWKLIMPINQGS 226
P S + N +VKADKISWKL FLLEM+VTSSRMA K+ M INQGS
Sbjct: 1570 PCRTISATKTNQNLHVKADKISWKLTFLLEMIVTSSRMA*KINMLINQGS 1421
Score = 48.3 bits (99), Expect(2) = 1e-17
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 577 SFLLATGLTSAVLELGPFPPYHQHAERHKGVHQNKYRNQEQGT 449
S LL T LTS V +L PFP YHQ AE K VH K ++ T
Sbjct: 2490 SILLVTNLTSTVPKLRPFPSYHQQAECDKSVHLQKQDKKQLPT 2362
Score = 48.7 bits (100), Expect(2) = 1e-09
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 225 RNLG*SA**VSMPFCYW*PSSPGGTSISNLFCQPSH 332
RNLG*SA * MPFC W* SS G S SNL CQ H
Sbjct: 1420 RNLG*SAC*FFMPFCCW*QSSQGEMSTSNLSCQL*H 1527
Score = 39.1 bits (79), Expect(2) = 1e-09
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 483 *TPL*RSAC*W*GGKGPSSSTALVRPVASRND 578
*T L SAC*W* GKG S T LVR V SR D
Sbjct: 2396 *TLLSHSAC*W*DGKGRSLGTVLVRFVTSRID 2491
Score = 57.4 bits (119), Expect = 2e-07
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = -1 / -3
Query: 482 PE*VS*SGAGDQTT*PR*RGLGDQSNSGLRSSSSFVLRMCLVSPQGIHQKM*RLTK 315
P+* S S G QT +* LGDQ+NSGLRSSSS LRM L S + IHQK+ + K
Sbjct: 2311 PK*GSLSKGGAQTRQLK*TDLGDQNNSGLRSSSSVALRMYLFSQREIHQKLHQTNK 2144
>LOC_Os05g35720:12005.t03165:unspliced-genomic transmembrane protein 18, putative, expressed|
Length = 1838
Score = 71.6 bits (150), Expect(4) = 2e-34
Identities = 23/40 (57%), Positives = 36/40 (90%)
Frame = +2 / +2
Query: 335 SGVFLAEKLNTFLGQNWKSFSSQNYFDPQGLFISVMWSGP 454
SGV+LAEK+N+++ ++WKS +++NYFD G+F+SV+WSGP
Sbjct: 1196 SGVYLAEKINSYMAEHWKSIATRNYFDRAGVFVSVVWSGP 1315
Score = 46.9 bits (96), Expect(4) = 2e-34
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / +3
Query: 503 CMLMVRWKRAELKHRAREARSKQE* 577
C LMV+WKRAEL+HRA+ AR KQ+*
Sbjct: 1482 CRLMVKWKRAELRHRAQLARDKQD* 1556
Score = 46.4 bits (95), Expect(4) = 2e-34
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 116 HADVVAELFGRVSTELRGGFGPAVDSFVGFFHAVDW 223
H D V+ L +S ELR G GPA DS + F AVDW
Sbjct: 118 HLDQVSGLVQALSAELRRGIGPAADSLLAFVRAVDW 225
Score = 46.4 bits (95), Expect(4) = 2e-34
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 221 WKEPWLIGMISFHAILLLVTIISRRNINFQLIL 319
++EPWLI ++ FHA LLL + RRN NFQL +
Sbjct: 349 FQEPWLICLMVFHATLLLTAVGLRRNANFQLFM 447
Score = 49.2 bits (101), Expect(4) = 1e-20
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = -3 / -3
Query: 489 VFTRISIVIRSRGPDHMTEMKRPWGSK*FWLEKLFQFCPKNVFSFSARNTPEN 331
+ T ++I ++ RGPD TE K P SK*F + LFQ +F FSAR TPE+
Sbjct: 1350 LLTTMTIDMKIRGPDQTTETKTPARSK*FRVAMLFQCSAI*LFIFSAR*TPES 1192
Score = 47.3 bits (97), Expect(4) = 1e-20
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 573 SCLLRASRARCLSSALFHLTISMQSVTRVFT 481
SCL RAS ARCLSSALFH TI+ +V R T
Sbjct: 1552 SCLSRAS*ARCLSSALFHFTINRHNVIRELT 1460
Score = 37.7 bits (76), Expect(4) = 1e-20
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 312 SWKLMFLLEMMVTSSRMAWKLIMPINQGS 226
SWKL FLL S+R+AW I I+ GS
Sbjct: 440 SWKLAFLLNPTAVSNRVAWNTIKQISHGS 354
Score = 29.5 bits (58), Expect(4) = 1e-20
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 222 QSTAWKKPTKESTAGPNPPRSSVET 148
QSTA K + S AGP P RSS E+
Sbjct: 224 QSTARTKARRLSAAGPIPRRSSAES 150
Score = 39.1 bits (79), Expect(2) = 3e-06
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 484 HQNKYRNQEQGTRPHDRDEEALGIKVILA*EALPVL 377
+ N +R +++GTRP DR++ + ++VI ALPVL
Sbjct: 1345 NHNDHRYEDKGTRPDDRNKNSSAVEVISCGNALPVL 1238
Score = 36.3 bits (73), Expect(2) = 3e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 313 KLEIDVPPGDDGYQ*QNGMETYHADQPRFL 224
+LEI +PP DG + Q+ ME + A+QP FL
Sbjct: 441 ELEIGIPPQPDGREQQSRMEYHQANQPWFL 352
Score = 31.8 bits (63), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 226 GTLVDRHDKFPCHSATGNHHLQEEHQFP 309
GT+ D D PC S ++EE QFP
Sbjct: 354 GTMADLLDGIPCDSVAHGRRVEEECQFP 437
>LOC_Os01g61410:12001.t05520:unspliced-genomic rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial|
precursor, putative, expressed
Length = 4245
Score = 28.1 bits (55), Expect(2) = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3 / -3
Query: 258 MPFCYW*PSSPGGTSISNLFCQPSHFLVYSLR 353
+P C + + P TSIS C P F+ + R
Sbjct: 3787 LPRCLYTKAGPRSTSISQFACPPPAFMTWLSR 3692
Score = 26.7 bits (52), Expect(2) = 5.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 817 VKCRCICIFIVMTCLSNTSV 876
VKC C+ + V LSNT++
Sbjct: 1646 VKCECVIVVNVTNYLSNTNI 1587
>LOC_Os09g34920:12009.t03019:unspliced-genomic alpha-L-fucosidase 1 precursor, putative, expressed|
Length = 1963
Score = 27.6 bits (54), Expect(2) = 6.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 984 AHPDSIQHQLKPHHYMF 934
AH D I HQ+ P++Y F
Sbjct: 1731 AHDDIISHQIIPYYYCF 1681
Score = 25.8 bits (50), Expect(2) = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3 / -2
Query: 195 KESTAGPNPPRSSVETRP 142
+ +T P PPR S TRP
Sbjct: 330 RRATRPPRPPRPSTATRP 277
>LOC_Os06g09390:12006.t00818:unspliced-genomic ethylene-responsive element binding protein 1, putative, expressed|
Length = 2582
Score = 29.9 bits (59), Expect(2) = 8.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2 / -1
Query: 529 PFPPYHQHAERHKGVHQNKYRNQEQGTRPHDRDE 428
P P HQ +E + H N +R++ T P +D+
Sbjct: 1931 PHPEIHQSSEGCQSTHPNHHRSEISCTAPGQQDQ 1830
Score = 23.5 bits (45), Expect(2) = 8.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 1061 FFFFFWNILKDLYLGMEGVHWFLA 990
F F W+IL+ +L WFL+
Sbjct: 2518 FSFTLWDILEAAFLVKYDHQWFLS 2447
>LOC_Os03g19930:12003.t01755:unspliced-genomic adenylosuccinate lyase, putative, expressed|
Length = 4181
Score = 30.4 bits (60), Expect(2) = 9.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 591 AWQHHHSCLLRASRARCLSSA 529
AW H C+LRAS++ +S+A
Sbjct: 4061 AWHKFHGCILRASKSLSISTA 3999
Score = 23.5 bits (45), Expect(2) = 9.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1 / -3
Query: 296 SSWR*WLPVAEWHGNLS 246
S WR WL +W L+
Sbjct: 1377 SCWRCWLQAGKWKSKLA 1327
>LOC_Os04g28090:12004.t02508:unspliced-genomic cell division cycle 5-like protein, putative, expressed|
Length = 7314
Score = 24.4 bits (47), Expect(2) = 9.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1 / -2
Query: 950 HITICSNLNCRLK**KN*TNHRTNETEV 867
HI++C L + *+ NH TN T++
Sbjct: 1715 HISMCCKLRKLIYM*RTVLNHTTNMTQI 1632
Score = 24.0 bits (46), Expect(2) = 9.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 1033 KTYI*EWREYIGSWLLCPPRLDTT 962
+T + EW+EY+ + L P+L +T
Sbjct: 1894 RT*LEEWKEYVDNILYIGPKLLST 1823
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 404,218,918
Number of extensions: 6379831
Number of successful extensions: 27581
Number of sequences better than 10.0: 37
Length of query: 354
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 304
Effective length of database: 52,799,986
Effective search space: 16051195744
Effective search space used: 16051195744
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)