| Clone Name | FLbaf127b07 |
|---|---|
| Clone Library Name | barley_pub |
>Q28GF5:TMM18_XENTR Transmembrane protein 18 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 136 Score = 80.5 bits (197), Expect = 1e-14 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Frame = +2 Query: 215 VDWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSF 394 +DWKEPWLIG+ FH + L+VT +S ++ Q+ V AE +N F +W+S+ Sbjct: 16 IDWKEPWLIGLAVFHILCLIVTYVSFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRSY 75 Query: 395 SSQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHR-AREARSKQ 571 S Q YFD G+FIS+ +S P +M K + K + +RE R K+ Sbjct: 76 SKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRKKK 135 Query: 572 E 574 E Sbjct: 136 E 136
>Q4V7N7:TMM18_XENLA Transmembrane protein 18 - Xenopus laevis (African clawed frog)| Length = 136 Score = 77.0 bits (188), Expect = 1e-13 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%) Frame = +2 Query: 215 VDWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSF 394 +DW EPWLIG+ +FH + +VT IS ++ Q+ V AE +N F +W+++ Sbjct: 16 IDWTEPWLIGLAAFHILCFIVTYISFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRAY 75 Query: 395 SSQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHR-AREARSKQ 571 S Q YFD G+FIS+ +S P +M K + K + +RE R K+ Sbjct: 76 SKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRKKK 135 Query: 572 E 574 E Sbjct: 136 E 136
>Q96B42:TMM18_HUMAN Transmembrane protein 18 - Homo sapiens (Human)| Length = 140 Score = 76.6 bits (187), Expect = 2e-13 Identities = 37/119 (31%), Positives = 62/119 (52%) Frame = +2 Query: 218 DWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFS 397 DW EPWL+G+ +FHA+ +L+T +S R+ Q+ V+ AE +N NW+ FS Sbjct: 22 DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81 Query: 398 SQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574 YFD +G+FIS+++S P +M K A+ + + ++ R K++ Sbjct: 82 KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 140
>Q641M3:TMM18_DANRE Transmembrane protein 18 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 152 Score = 75.9 bits (185), Expect = 3e-13 Identities = 39/129 (30%), Positives = 60/129 (46%) Frame = +2 Query: 185 VDSFVGFFHAVDWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLN 364 + S F +VDW EPWL+ +++FH T++S + Q+ + V+ AE LN Sbjct: 22 ITSIWTFLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLN 81 Query: 365 TFLGQNWKSFSSQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKH 544 NW+SFS YFD +G+FIS+++S P M K +LK Sbjct: 82 ELAAMNWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKR 141 Query: 545 RAREARSKQ 571 +A K+ Sbjct: 142 KAARENHKK 150
>Q3SZ36:TMM18_BOVIN Transmembrane protein 18 - Bos taurus (Bovine)| Length = 139 Score = 73.6 bits (179), Expect = 1e-12 Identities = 39/119 (32%), Positives = 59/119 (49%) Frame = +2 Query: 218 DWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFS 397 DW EPWL+G+ FH + LL+T S + Q+ + V+ AE +N NW+ FS Sbjct: 22 DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFS 81 Query: 398 SQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574 YFD +G+FIS+++S P ++M + + RAR AR K+E Sbjct: 82 KHQYFDSRGMFISLVFSAPLLLNALVIVVLWVRKTLVVMTDLRSLREQRRAR-ARPKEE 139
>Q6DGF8:TMM18_RAT Transmembrane protein 18 - Rattus norvegicus (Rat)| Length = 140 Score = 73.2 bits (178), Expect = 2e-12 Identities = 36/119 (30%), Positives = 59/119 (49%) Frame = +2 Query: 218 DWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFS 397 DW EPWL+G+++FH + LL+T S + Q+ V+ AE +N NW+ F+ Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFA 81 Query: 398 SQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574 YFD +G+FIS+++S P +M K + + + R+ R K+E Sbjct: 82 KYQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140
>Q3TUD9:TMM18_MOUSE Transmembrane protein 18 - Mus musculus (Mouse)| Length = 140 Score = 72.8 bits (177), Expect = 2e-12 Identities = 37/119 (31%), Positives = 58/119 (48%) Frame = +2 Query: 218 DWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFS 397 DW EPWL+G+++FH + LL+T S + Q+ V+ AE +N NW+ FS Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFS 81 Query: 398 SQNYFDPQGLFISVMWSGPXXXXXXXXXXXXXXXXCMLMVRWKRAELKHRAREARSKQE 574 YFD +G+FIS+++S P +M K + + + R R K+E Sbjct: 82 KYQYFDSRGMFISLVFSAPLLFNAMLIVIMWVRKTLTVMTDLKTLQEERKERRRRRKEE 140
>Q5F410:TMM18_CHICK Transmembrane protein 18 - Gallus gallus (Chicken)| Length = 142 Score = 68.2 bits (165), Expect = 6e-11 Identities = 30/79 (37%), Positives = 45/79 (56%) Frame = +2 Query: 218 DWKEPWLIGMISFHAILLLVTIISRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSFS 397 DW EPWL+G+ FH + L+T S ++ Q+ V+ AE +N NW+ FS Sbjct: 26 DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85 Query: 398 SQNYFDPQGLFISVMWSGP 454 YFD +G+FIS+++S P Sbjct: 86 KYQYFDSRGMFISLVFSAP 104
>Q06FL5:YCF4_PELHO Photosystem I assembly protein ycf4 - Pelargonium hortorum (Common| geranium) Length = 184 Score = 33.9 bits (76), Expect = 1.2 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 287 SRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSF--SSQNYFDPQGLFIS 436 SR+ NF L F S FL +++LG+NW S S Q F PQG+ +S Sbjct: 16 SRKTSNFLWALILFLGSFAFLLVGTSSYLGRNWISLFPSQQILFFPQGVVMS 67
>Q06RD0:YCF4_JASNU Photosystem I assembly protein ycf4 - Jasminum nudiflorum (Winter| jasmine) Length = 184 Score = 33.5 bits (75), Expect = 1.5 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +2 Query: 287 SRRNINFQLILSAFTFSGVFLAEKLNTFLGQNWKSF--SSQNYFDPQGLFIS 436 SR+ NF L F S FL +++LG+NW SF S Q F PQG+ +S Sbjct: 16 SRKLSNFCWALILFLGSLGFLLVGTSSYLGRNWISFVPSQQFIFFPQGIVMS 67
>Q24523:BUN2_DROME Protein bunched, class 2 isoform - Drosophila melanogaster (Fruit| fly) Length = 1206 Score = 32.7 bits (73), Expect = 2.6 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -2 Query: 601 RSAGMAASSFLLATGLTSAVLELGPFPPYHQHAERHKGVHQNKYRNQEQGT 449 RS G AA+S ATG T+A P +H H H H N + Q+Q T Sbjct: 281 RSVGGAATS--AATGTTAAAGSHHHQPHHHHHHHHHHHQHHNHQQQQQQQT 329
>Q8MT36:MES4_DROME Probable histone-lysine N-methyltransferase Mes-4 - Drosophila| melanogaster (Fruit fly) Length = 1427 Score = 32.3 bits (72), Expect = 3.4 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +3 Query: 726 HGFTHALADVRQIKAYVCVGSSECYLDSCRSQVPLYMHIHCYDLPLK 866 H A A V + Y+CV E C P+ +H HC ++P+K Sbjct: 988 HNIAKADAHVNVLWCYICVKGGELV---CCETCPIAVHAHCRNIPIK 1031
>P20806:7LESS_DROVI Protein sevenless - Drosophila virilis (Fruit fly)| Length = 2594 Score = 32.0 bits (71), Expect = 4.4 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -2 Query: 634 LDQQLNLLPHNRSAGMAASSFLLATGLTSAVLELGPFPPYHQHAERHKGVHQNKYRNQEQ 455 L+ QLNL +RSA + S A GLT + +L P+ Y A+ Y Q+ Sbjct: 1747 LNYQLNLSSSSRSAQLELRSLHSAAGLTLNISQLQPYQAYELRAQ------VGSYYQQQL 1800 Query: 454 GTRP 443 G P Sbjct: 1801 GQEP 1804
>Q9DB98:LENG1_MOUSE Leukocyte receptor cluster member 1 - Mus musculus (Mouse)| Length = 261 Score = 30.8 bits (68), Expect = 9.9 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -2 Query: 532 GPFPPYHQHAERHKGVHQNKYRNQEQGTRPHDRDEEALGIKVIL 401 GP + + E KGV + ++E+ R +R E+ALGI L Sbjct: 74 GPVDLFRELLEERKGVPRGNKEHEEEKRREKERQEKALGILTYL 117 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 170,151,469 Number of extensions: 3573666 Number of successful extensions: 8737 Number of sequences better than 10.0: 14 Number of HSP's gapped: 8720 Number of HSP's successfully gapped: 14 Length of query: 354 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 240 Effective length of database: 69,416,809 Effective search space: 16660034160 Effective search space used: 16660034160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)