| Clone Name | FLbaf126p07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os12g0572800:Os12g0572800 | 42 | 0.002 | 2 | AK063781:Os05g0568600 | 32 | 1.2 | 3 | AK109044: | 32 | 2.1 | 4 | AK106882:Os08g0197200 | 31 | 2.7 | 5 | AK120863:Os09g0434900 | 30 | 6.1 | 6 | AK109104:Os09g0434900 | 30 | 6.1 | 7 | AK065281:Os06g0476100 | 30 | 8.0 |
|---|
>Os12g0572800:Os12g0572800 | Length = 1132 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +3 Query: 246 DKAEAPHENSDC*SICCSCEATMETVPCLRKLCV-WTMKCVFTAWVIYGTA 395 D+ AP+ SD IC S +A M+ VPCL K+CV M+C A + GTA Sbjct: 1020 DRFLAPYPKSDYCIICRSYDAVMQLVPCLHKICVACMMRCNVRACMTCGTA 1070
>AK063781:Os05g0568600 | Length = 231 Score = 32.3 bits (72), Expect = 1.2 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -1 Query: 138 DAMTRDQGWRHGISGAGNGGGR 73 DA R GWR+ SG GNGGGR Sbjct: 182 DAGGRGGGWRYYASGGGNGGGR 203
>AK109044: | Length = 424 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 573 RVQNMVRGQIDQSVSAAASISSRNPMTLSNFAATTQTRMSPAAAGAHTVT 722 RVQ+ + SAAA+ +S P + +ATT+T+ S A AG+ T Sbjct: 217 RVQSTTPASRTEPTSAAAAAASSQPSSAVPTSATTETKPSAATAGSQDGT 266
>AK106882:Os08g0197200 | Length = 484 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = -1 Query: 159 MEAGAAADAMTRDQGWRHGISGAGNGGG 76 M+ GAA A RD G G SG G GGG Sbjct: 1 MQQGAAGQAPRRDDGEAAGPSGGGGGGG 28
>AK120863:Os09g0434900 | Length = 296 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 249 CRGSRAVVDAGSRASLPLESTALCEEEKRGMEAGAAADAMTRDQGW--RHGISGAGNGGG 76 C A+ + A+LPL + A K + A + ++ W RHG G G+GG Sbjct: 154 CGEMAALEGEAAAAALPLRAAA----SKASCPTCSRAFCLQCEEPWDDRHGGGGGGDGGA 209 Query: 75 RC 70 RC Sbjct: 210 RC 211
>AK109104:Os09g0434900 | Length = 296 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 249 CRGSRAVVDAGSRASLPLESTALCEEEKRGMEAGAAADAMTRDQGW--RHGISGAGNGGG 76 C A+ + A+LPL + A K + A + ++ W RHG G G+GG Sbjct: 154 CGEMAALEGEAAAAALPLRAAA----SKASCPTCSRAFCLQCEEPWDDRHGGGGGGDGGA 209 Query: 75 RC 70 RC Sbjct: 210 RC 211
>AK065281:Os06g0476100 | Length = 126 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +1 Query: 103 PMSPPLVSRHRIGGSSRFHSPFLFFTQGSGL*WERCSRSRINDCSGAP 246 PM PLV H++ +R+H+ L Q + L W CS +D AP Sbjct: 47 PMPRPLVPLHQLRPLTRYHAAGLLPEQDALLSWCLCSPRLQDDPGAAP 94 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 55,860,016 Number of extensions: 1312932 Number of successful extensions: 3617 Number of sequences better than 10.0: 7 Number of HSP's gapped: 3607 Number of HSP's successfully gapped: 7 Length of query: 650 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 543 Effective length of database: 11,115,468 Effective search space: 6035699124 Effective search space used: 6035699124 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)