ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf124i13 |
|---|---|
| Clone Library Name | barley_pub |
>P80607:UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-forming] - Zea mays (Maize)| Length = 364 Score = 709 bits (1829), Expect = 0.0 Identities = 330/354 (93%), Positives = 342/354 (96%) Frame = +1 Query: 91 MAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIK 270 MAGTVTVPGSS PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDP+K IK Sbjct: 1 MAGTVTVPGSSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIK 60 Query: 271 VPEGFDYDLYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPS 450 VPEGFDY+LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPS Sbjct: 61 VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPS 120 Query: 451 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNI 630 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGA TAVSHGLWLNI Sbjct: 121 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNI 180 Query: 631 PDYDAPTQMVKPRERNSRYVDAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQP 810 PDYDAPTQ+VKP+ERN RYVDAV+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQP Sbjct: 181 PDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQP 240 Query: 811 IGRYDDMWAGWCVKVICDHLSLGVKTGLPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFF 990 IGRYDDMWAGWCVKVICDHLSLGVKTGLPY+WHSKASNPFVNLKKEYKGIFWQEDIIPFF Sbjct: 241 IGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFF 300 Query: 991 QNATLSKECDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDELNPS 1152 QN T+ K+CDTVQKCYI LS QV+EKLG IDPYF+KL DAMVTWIEAWDELNPS Sbjct: 301 QNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNPS 354
>Q8RU27:UPTG2_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 2 - Solanum tuberosum| (Potato) Length = 366 Score = 674 bits (1740), Expect = 0.0 Identities = 311/346 (89%), Positives = 331/346 (95%) Frame = +1 Query: 115 GSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 294 GSSV TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK I VPEGFDY+ Sbjct: 3 GSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYE 62 Query: 295 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALE 474 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALE Sbjct: 63 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALE 122 Query: 475 QHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQ 654 QHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REGA TAVSHGLWLNIPDYDAPTQ Sbjct: 123 QHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQ 182 Query: 655 MVKPRERNSRYVDAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMW 834 +VKPRERN+RYVDAV+TIPKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMW Sbjct: 183 LVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMW 242 Query: 835 AGWCVKVICDHLSLGVKTGLPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKE 1014 AGWC+KVICDHL LGVKTGLPY+WHSKASNPFVNLKKEYKGI+WQE+IIPF Q+ATL K+ Sbjct: 243 AGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKD 302 Query: 1015 CDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDELNPS 1152 C +VQ+CY+ LS+QV+EKL IDPYF KLADAMVTWIEAWDELNP+ Sbjct: 303 CTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNPT 348
>O04300:UPTG_PEA Alpha-1,4-glucan-protein synthase [UDP-forming] - Pisum sativum| (Garden pea) Length = 364 Score = 665 bits (1717), Expect = 0.0 Identities = 306/344 (88%), Positives = 330/344 (95%), Gaps = 1/344 (0%) Frame = +1 Query: 118 SSVPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 294 +S+P TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDPSK IKVPEGFDY+ Sbjct: 2 ASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYE 61 Query: 295 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALE 474 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDP+G +INALE Sbjct: 62 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALE 121 Query: 475 QHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQ 654 QHIKNLLSPSTPFFFNTLYDPYREG DFVRGYPFSLREG PTAVSHGLWLNIPDYDAPTQ Sbjct: 122 QHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQ 181 Query: 655 MVKPRERNSRYVDAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMW 834 +VKP ERN+R+VDAVLTIPKG+LFPMCGMNLAF+R+LIGPAMYFGLMGDGQPIGRYDDMW Sbjct: 182 LVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMW 241 Query: 835 AGWCVKVICDHLSLGVKTGLPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKE 1014 AGWC+KVICDHL GVKTGLPY+WHSKASNPFVNLKKEYKGIFWQE+IIPFFQ ATLSK+ Sbjct: 242 AGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKD 301 Query: 1015 CDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDELN 1146 C +VQKCYI LS+QV+EKLG IDPYF+KLADAMVTW+EAWDE+N Sbjct: 302 CTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEIN 345
>Q9SC19:UPTG1_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 1 - Solanum tuberosum| (Potato) Length = 365 Score = 665 bits (1715), Expect = 0.0 Identities = 305/339 (89%), Positives = 323/339 (95%) Frame = +1 Query: 130 STPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRN 309 +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK IKVPEGFDY+LYNRN Sbjct: 4 ATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRN 63 Query: 310 DINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKN 489 DINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALEQHIKN Sbjct: 64 DINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKN 123 Query: 490 LLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQMVKPR 669 LL PSTP FFNTLYDPYR+GADFVRGYPFS+REGAPTAVSHGLWLNIPDYDAPTQ+VKP Sbjct: 124 LLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPH 183 Query: 670 ERNSRYVDAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCV 849 ERN+RYVDAV+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC Sbjct: 184 ERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCT 243 Query: 850 KVICDHLSLGVKTGLPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKECDTVQ 1029 KVICDHL LG+KTGLPY+WHSKASNPFVNLKKEY GIFWQE+IIPFFQ ATL KEC TVQ Sbjct: 244 KVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECTTVQ 303 Query: 1030 KCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDELN 1146 +CY+ LS+QV++KL IDPYF KL +AMVTWIEAWDELN Sbjct: 304 QCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342
>P43635:CISY3_YEAST Citrate synthase 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 486 Score = 33.1 bits (74), Expect = 2.9 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 739 MNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSL--GVKTGLPYLWHS 912 +NL L+ +Y + +G P+G+Y + WC IC L + G + S Sbjct: 202 LNLIASLPLLTGRIYSNITNEGHPLGQYSEE-VDWCTN-ICSLLGMTNGTNSSNTCNLTS 259 Query: 913 KASNPFVNLKKEYKGI 960 + S F+NL + Y GI Sbjct: 260 QQSLDFINLMRLYTGI 275
>Q9Y6Y8:S23IP_HUMAN SEC23-interacting protein - Homo sapiens (Human)| Length = 1000 Score = 32.7 bits (73), Expect = 3.8 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Frame = +1 Query: 67 IEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIP---TIRNLDFLEMWRPF--FQPYHL 231 ++ P Q+ + P VPS LL+++ + V P + +++ ++W PF F +L Sbjct: 237 VQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNL 296 Query: 232 IIVQDG---DPSKAIKVPEGFDYDLY 300 + + DP + +G YD+Y Sbjct: 297 EEIYNSVQPDPESVVLGTDGGRYDVY 322
>Q822I4:EFTU_CHLCV Elongation factor Tu - Chlamydophila caviae| Length = 394 Score = 32.3 bits (72), Expect = 5.0 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Frame = +1 Query: 688 VDAVLTIPKGTLFPMCGMNLAFDRQLIGP-----AMYFGLMGDGQPIG 816 V V+T+P+GT M G N+ F+ QLI P M F + G+ IG Sbjct: 338 VTGVVTLPEGTEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIG 385 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 233,454,181 Number of extensions: 5387785 Number of successful extensions: 14510 Number of sequences better than 10.0: 7 Number of HSP's gapped: 14506 Number of HSP's successfully gapped: 7 Length of query: 475 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 358 Effective length of database: 68,593,924 Effective search space: 24556624792 Effective search space used: 24556624792 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
