| Clone Name | FLbaf124h23 |
|---|---|
| Clone Library Name | barley_pub |
>P49020:TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 precursor -| Cricetulus griseus (Chinese hamster) Length = 196 Score = 63.2 bits (152), Expect = 2e-09 Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 5/197 (2%) Frame = +2 Query: 221 VLCIMPFLHPAAAIRFV-IDR--EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDL 391 VL ++ L A+ FV ID EECF V G + + F V + + + V++ Sbjct: 2 VLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEVAEGG----FLDIDVEI 56 Query: 392 VVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYFD 565 D+ G D ++S K+ F G ++FCF+N+ + + + F + +G Sbjct: 57 TGPDNKGIYKGDR--ESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQ 114 Query: 566 QHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAA 745 + H + L E I +L A+ ++ EQ ++E + +N+N + R + + FE+ Sbjct: 115 DMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALV 174 Query: 746 LITASVIQVYLLRRLFE 796 L+ ++ Q+Y L+R FE Sbjct: 175 LVAMTLGQIYYLKRFFE 191
>Q63524:TMED2_RAT Transmembrane emp24 domain-containing protein 2 precursor - Rattus| norvegicus (Rat) Length = 201 Score = 62.8 bits (151), Expect = 2e-09 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 EECF V G + + F V + + + V++ D+ G D ++S K+ F Sbjct: 30 EECFFERVT-SGTKMGLIFEVAEGG----FLDIDVEITGPDNKGIYKGDR--ESSGKYTF 82 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYFDQHAKDEHFSPLFEQIAKLDEALY 634 G ++FCF+N+ + + + F + +G + H + L E I +L A+ Sbjct: 83 AAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMT 142 Query: 635 NIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFE 796 ++ EQ ++E + +N+N + R + + FE+ L+ ++ Q+Y L+R FE Sbjct: 143 AVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
>Q9R0Q3:TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 precursor - Mus| musculus (Mouse) Length = 201 Score = 62.8 bits (151), Expect = 2e-09 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 EECF V G + + F V + + + V++ D+ G D ++S K+ F Sbjct: 30 EECFFERVT-SGTKMGLIFEVAEGG----FLDIDVEITGPDNKGIYKGDR--ESSGKYTF 82 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYFDQHAKDEHFSPLFEQIAKLDEALY 634 G ++FCF+N+ + + + F + +G + H + L E I +L A+ Sbjct: 83 AAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMT 142 Query: 635 NIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFE 796 ++ EQ ++E + +N+N + R + + FE+ L+ ++ Q+Y L+R FE Sbjct: 143 AVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
>Q15363:TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 precursor - Homo| sapiens (Human) Length = 201 Score = 62.8 bits (151), Expect = 2e-09 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 EECF V G + + F V + + + V++ D+ G D ++S K+ F Sbjct: 30 EECFFERVT-SGTKMGLIFEVAEGG----FLDIDVEITGPDNKGIYKGDR--ESSGKYTF 82 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYFDQHAKDEHFSPLFEQIAKLDEALY 634 G ++FCF+N+ + + + F + +G + H + L E I +L A+ Sbjct: 83 AAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMT 142 Query: 635 NIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFE 796 ++ EQ ++E + +N+N + R + + FE+ L+ ++ Q+Y L+R FE Sbjct: 143 AVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
>Q9Y3B3:TMED7_HUMAN Transmembrane emp24 domain-containing protein 7 precursor - Homo| sapiens (Human) Length = 224 Score = 62.4 bits (150), Expect = 3e-09 Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 9/216 (4%) Frame = +2 Query: 200 WTRACVLVLCIMPFLHPAAAIRFVI--DREECFSHNVEYEGDTVHVSFVVIKADTPWHYS 373 W + +L ++P A+ I F + + ++CF ++ +G + F VI T HY Sbjct: 17 WGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIA-QGTKCTLEFQVI---TGGHYD 72 Query: 374 EDGVDLVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK--SPYHETIDFDVHVG 547 VD ++D +G + K D F F K G ++FCF+N+ + H+T+ FD VG Sbjct: 73 ---VDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVG 129 Query: 548 H-YSYFDQHAKDEHFSPLFEQIAKLDEALYN-IQFEQHW--LEAQTDRQAILNENMSRRA 715 F + + + + EAL + I ++ H+ EAQ +A E+++ R Sbjct: 130 EDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRA---EDLNTRV 186 Query: 716 IHKALFESAALITASVIQVYLLRRLF-ERKLGTSRV 820 + ++ E+ L+ S+ QV+LL+ F +++ T+RV Sbjct: 187 AYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTTRV 222
>O17528:SEL9_CAEEL Suppressor/enhancer of lin-12 protein 9 precursor - Caenorhabditis| elegans Length = 203 Score = 62.4 bits (150), Expect = 3e-09 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 13/217 (5%) Frame = +2 Query: 185 MEGLSWTRACVLVLCIMPFLHPAAAIRFVID--REECFSHNVEYEGDTVHVSFVVIKADT 358 M L+W A + F+ PAA+ +D E+CF + G + + F V Sbjct: 1 MNSLTWILAVL-------FVTPAASYFIHVDANEEQCFFDRLT-SGTKMGLMFEV----- 47 Query: 359 PWHYSEDG---VDLVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK----SPYH 517 +E G +D+ + + ++ ++S KF F GV+ +CF NK +P Sbjct: 48 ----AEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKA 103 Query: 518 ETIDFDVHVGHY----SYFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQA 685 ++ H + +Q A D + L E + +L AL +++ EQ ++E + Sbjct: 104 VMFTVEITEPHQQAPGAAANQDAADN--AKLEEMVRELSSALMSVKHEQEYMEVRERVHR 161 Query: 686 ILNENMSRRAIHKALFESAALITASVIQVYLLRRLFE 796 +NEN + R + A FE+ L+ +V Q++ L+R FE Sbjct: 162 NINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFE 198
>Q78IS1:TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 precursor - Mus| musculus (Mouse) Length = 221 Score = 57.4 bits (137), Expect = 9e-08 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 4/183 (2%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 ++CF VE +G + + VI T HY VD V+D G + K D F + Sbjct: 42 KQCFHEEVE-QGVKFSLDYQVI---TGGHYD---VDCYVEDPRGNVIYRETKKQYDSFTY 94 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYF--DQHAKDEHFSPLFEQIAKLDEA 628 + +GV+RFCF+N+ + H+T+ FD VG D + + + + EA Sbjct: 95 KTEAKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEA 154 Query: 629 LYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFERKLG 808 L + Q + + E+++ R + ++ E+ AL S QV LL+ F K Sbjct: 155 LKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRP 214 Query: 809 TSR 817 +R Sbjct: 215 VNR 217
>Q9Y3Q3:TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 precursor - Homo| sapiens (Human) Length = 217 Score = 56.6 bits (135), Expect = 2e-07 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 4/183 (2%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 ++CF VE +G + + VI T HY VD V+D G + K D F + Sbjct: 38 KQCFHEEVE-QGVKFSLDYQVI---TGGHYD---VDCYVEDPQGNTIYRETKKQYDSFTY 90 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYF--DQHAKDEHFSPLFEQIAKLDEA 628 + +GV++FCF+N+ + H+T+ FD VG D + + + + EA Sbjct: 91 RAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEA 150 Query: 629 LYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFERKLG 808 L + Q + + E+++ R + ++ E+ AL S QV LL+ F K Sbjct: 151 LKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRP 210 Query: 809 TSR 817 SR Sbjct: 211 ISR 213
>Q6AY25:TMED3_RAT Transmembrane emp24 domain-containing protein 3 precursor - Rattus| norvegicus (Rat) Length = 221 Score = 55.5 bits (132), Expect = 3e-07 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 4/183 (2%) Frame = +2 Query: 281 EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEF 460 ++CF VE +G + + VI T HY VD V+D G + K D F + Sbjct: 42 KQCFHEEVE-QGVKFSLDYQVI---TGGHYD---VDCYVEDPMGNIIYRETKKQYDSFTY 94 Query: 461 IVQKRGVHRFCFTNK--SPYHETIDFDVHVGHYSYF--DQHAKDEHFSPLFEQIAKLDEA 628 + +GV+RFCF+N+ + H+T+ FD VG D + + + + EA Sbjct: 95 KTEVKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEA 154 Query: 629 LYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFERKLG 808 L + Q + + E+++ R + ++ E+ AL S QV LL+ F K Sbjct: 155 LKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRP 214 Query: 809 TSR 817 +R Sbjct: 215 INR 217
>Q90515:TMEDA_FUGRU Transmembrane emp24 domain-containing protein 10 precursor - Fugu| rubripes (Japanese pufferfish) (Takifugu rubripes) Length = 213 Score = 53.1 bits (126), Expect = 2e-06 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 4/165 (2%) Frame = +2 Query: 320 TVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFT 499 TVH S V+ DG + DS+ + D T KF F + + CF Sbjct: 54 TVHTSSTVVG---------DGSIFKITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCFE 104 Query: 500 NKSPYH---ETIDFDVHVG-HYSYFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEA 667 +K + ++ D+ G +++ AK E PL ++ +L++ +I + +++ Sbjct: 105 SKCTGRVPDQLVNLDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKK 164 Query: 668 QTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFERK 802 + + NE+ + R ++ ++F LI + QV+ LRR F+ K Sbjct: 165 REEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAK 209
>Q5RE32:TMEDA_PONPY Transmembrane emp24 domain-containing protein 10 precursor - Pongo| pygmaeus (Orangutan) Length = 219 Score = 51.2 bits (121), Expect = 6e-06 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + ++E + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>P49755:TMEDA_HUMAN Transmembrane emp24 domain-containing protein 10 precursor - Homo| sapiens (Human) Length = 219 Score = 49.7 bits (117), Expect = 2e-05 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>Q5E971:TMEDA_BOVIN Transmembrane emp24 domain-containing protein 10 precursor - Bos| taurus (Bovine) Length = 219 Score = 49.7 bits (117), Expect = 2e-05 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>Q6C503:ERV25_YARLI Endoplasmic reticulum vesicle protein 25 precursor - Yarrowia| lipolytica (Candida lipolytica) Length = 211 Score = 49.7 bits (117), Expect = 2e-05 Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 8/207 (3%) Frame = +2 Query: 206 RACVLVLCIMPFLHPAAAIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGV 385 ++ V VL ++ ++ AA+RFV+ ++ + VV+ ++P + + Sbjct: 2 KSIVSVLTLLLLINAVAALRFVLPAKDKNELPFCVRDFVKNGELVVVTVESPKYADGQQL 61 Query: 386 DLVVKDSNGAQVRDSRDKTSDKFE-FIVQKRGVHRFCFTNKSPYHET------IDFDVHV 544 +VV+D++G + ++ + F + CF N + H+ ID V + Sbjct: 62 SVVVRDAHGNEYTRIKNVLGREITTFSSHQDTALDVCFHNVANSHQDLGKTKEIDLSVAI 121 Query: 545 GHYSY-FDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIH 721 G + ++Q E P Q+ K++E + + E ++L+ + R NE+ +RR Sbjct: 122 GANARDWEQIQASEKLKPAEVQLRKIEEIVDEVDKEMNYLKMREIRLRDTNESTNRRVKF 181 Query: 722 KALFESAALITASVIQVYLLRRLFERK 802 ++ + ALI V Q+ LR F K Sbjct: 182 FSVGITLALIALGVWQIIYLRSYFRSK 208
>O35587:TMEDA_MESAU Transmembrane protein Tmp21 precursor - Mesocricetus auratus| (Golden hamster) Length = 219 Score = 49.3 bits (116), Expect = 2e-05 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MLCLIGLATWQVFYLRRFFKAK 215
>Q63584:TMEDA_RAT Transmembrane emp24 domain-containing protein 10 precursor - Rattus| norvegicus (Rat) Length = 219 Score = 48.9 bits (115), Expect = 3e-05 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>Q9D1D4:TMEDA_MOUSE Transmembrane emp24 domain-containing protein 10 precursor - Mus| musculus (Mouse) Length = 219 Score = 48.9 bits (115), Expect = 3e-05 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D T KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>Q6CWW7:ERV25_KLULA Endoplasmic reticulum vesicle protein 25 precursor - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 212 Score = 48.5 bits (114), Expect = 4e-05 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 12/210 (5%) Frame = +2 Query: 209 ACVLVLCIMPFLHPAAAIRFVIDR----EECFSHNVEYEGDTVHVSFVVIKADTPWHYSE 376 ACVL+LC + F A+RF I E+ + EG V+I +T + Sbjct: 6 ACVLLLCAL-FFEQVFAVRFDIPASTKPEQVCIRDFVSEGQ-----LVLIDIETDGSVGD 59 Query: 377 -DGVDLVVKDSNGAQVRDSRDKTSD-KFEFIVQKRGVHRFCFTNKSPYH-----ETIDFD 535 ++L V+DSNG + R +RD + + F + CF N + + +I+ D Sbjct: 60 GQQLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELD 119 Query: 536 VHVGHYSY-FDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRR 712 + G + +++ E P+ ++ +++E I E ++L+ + +R NE+ +RR Sbjct: 120 IESGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRR 179 Query: 713 AIHKALFESAALITASVIQVYLLRRLFERK 802 + ++ L+ QV ++ F K Sbjct: 180 VRNFSIAVIVVLVALGAWQVNYMKNFFRAK 209
>Q28735:TMEDA_RABIT Transmembrane emp24 domain-containing protein 10 precursor -| Oryctolagus cuniculus (Rabbit) Length = 219 Score = 48.1 bits (113), Expect = 5e-05 Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2 Query: 389 LVVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH---ETIDFDVHVG-HYS 556 L + DS G + D + KF F + + CF +K + + D+ G Sbjct: 74 LKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAK 133 Query: 557 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 736 +++ AK E PL ++ +L++ +I + +++ + + NE+ + R ++ ++F Sbjct: 134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFS 193 Query: 737 SAALITASVIQVYLLRRLFERK 802 LI + QV+ LRR F+ K Sbjct: 194 MFCLIGLATWQVFYLRRFFKAK 215
>P32803:EMP24_YEAST Endosomal protein P24B precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 203 Score = 46.6 bits (109), Expect = 2e-04 Identities = 39/193 (20%), Positives = 79/193 (40%) Frame = +2 Query: 218 LVLCIMPFLHPAAAIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVV 397 ++ C + F A + CF ++ +GD + +SF + G ++ Sbjct: 9 VIACFLFFSASAHNVLLPAYGRRCFFEDLS-KGDELSISFQFGDRNPQSSSQLTGDFIIY 67 Query: 398 KDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYHETIDFDVHVGHYSYFDQHAK 577 ++ RD + + +G ++CF N++ ET D ++ Y D Sbjct: 68 GPERHEVLKTVRDTSHGEITLSAPYKGHFQYCFLNENTGIETKDVTFNIHGVVYVD--LD 125 Query: 578 DEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITA 757 D + + L + KL + ++ EQ ++ + E+ + R ++F+ +I Sbjct: 126 DPNTNTLDSAVRKLSKLTREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIAN 185 Query: 758 SVIQVYLLRRLFE 796 S+ Q+Y LRR FE Sbjct: 186 SLFQIYYLRRFFE 198
>Q4P958:ERV25_USTMA Endoplasmic reticulum vesicle protein 25 precursor - Ustilago| maydis (Smut fungus) Length = 224 Score = 45.1 bits (105), Expect = 5e-04 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 11/173 (6%) Frame = +2 Query: 317 DTVHVSFVVIKADTPWHYSEDGVDLVVKDS---NGAQVRDSRDKTSDKFEFIVQKRGVHR 487 D++ + + A P+ +S VD+ V D N + K + Sbjct: 48 DSLVIVTASVVAKEPFDFSHQRVDIEVVDGSQHNNVYLSKKAIKGETRLAINTHSHADLG 107 Query: 488 FCFTNKSPYHE-------TIDFDVHVGHYSY-FDQHAKDEHFSPLFEQIAKLDEALYNIQ 643 CF N TID DV +G + ++ A E S L ++ KL+ I Sbjct: 108 VCFKNTLTSKSGNQIPVVTIDLDVDIGADAVDYNAIANQESLSGLETEMRKLEAVANEIV 167 Query: 644 FEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITASVIQVYLLRRLFERK 802 E +L+ + R A N + + R + A+ ALI V QV+ LR F+RK Sbjct: 168 NEMEYLKKRELRMADTNLSTNMRVTNFAILTLIALIALGVWQVFHLRGFFKRK 220
>O13770:YE98_SCHPO Uncharacterized protein C17A5.08 precursor - Schizosaccharomyces| pombe (Fission yeast) Length = 210 Score = 42.0 bits (97), Expect = 0.004 Identities = 38/202 (18%), Positives = 86/202 (42%), Gaps = 8/202 (3%) Frame = +2 Query: 218 LVLCIMPFLHPAAAIRFVIDREE--CFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDL 391 + L ++ L A + F ++ +E C+ + + G+ H ++ V + VD Sbjct: 9 ITLFLLASLASAIELTFKLENQEKQCYYLDSFHTGEKTHFTYAVQSGGS------FDVDY 62 Query: 392 VVKDSNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK-SPYHETI-----DFDVHVGHY 553 ++K + V + + F ++++G + FCF N S + + I + + Sbjct: 63 MIKAPSQKTVALGKKRRQADVFFTLEEKGEYEFCFDNHMSTFTDKIVTMEITMENELSLP 122 Query: 554 SYFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALF 733 + AKD + + ++ AL I Q++ + + R ++ R +L Sbjct: 123 ALTRDEAKDYKKDSMQSTVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQARIFWFSLA 182 Query: 734 ESAALITASVIQVYLLRRLFER 799 ES ++ S +QV++++ F+R Sbjct: 183 ESIMVVALSALQVFIVKTFFKR 204
>P56474:UVRA_HELPY UvrABC system protein A - Helicobacter pylori (Campylobacter| pylori) Length = 935 Score = 37.0 bits (84), Expect = 0.12 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +2 Query: 608 IAKLDEALYNIQFEQHWLEAQTDRQAILNENMSR--RAIHKALFESAALITASVIQ 769 + +LDE ++ + ++H +EA DR + NEN SR AI KAL ES + ++Q Sbjct: 183 MVRLDEEIHLHKTKKHTIEAVVDRVVVNNENASRIASAIEKALKESYGELEVEILQ 238
>P38819:ERP5_YEAST Protein ERP5 precursor - Saccharomyces cerevisiae (Baker's yeast)| Length = 212 Score = 35.4 bits (80), Expect = 0.36 Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 3/135 (2%) Frame = +2 Query: 407 NGAQVRDSRDKTSDKFEFIVQKRGVHRFCFT---NKSPYHETIDFDVHVGHYSYFDQHAK 577 N +V + ++ + F G HRFCFT +K + ++ +G+ D K Sbjct: 76 NDHRVLNQKNSHTGDVTFTALDTGEHRFCFTPFYSKKSATLRVFIELEIGNVEALDS-KK 134 Query: 578 DEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALITA 757 E + L ++ +L + L +I+ EQ + + +E+ + + + ++F+ L+ Sbjct: 135 KEDMNSLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSESANSKIMTWSVFQLLILLGT 194 Query: 758 SVIQVYLLRRLFERK 802 Q+ L+ F ++ Sbjct: 195 CAFQLRYLKNFFVKQ 209
>Q9ZLD6:UVRA_HELPJ UvrABC system protein A - Helicobacter pylori J99 (Campylobacter| pylori J99) Length = 941 Score = 35.0 bits (79), Expect = 0.47 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +2 Query: 608 IAKLDEALYNIQFEQHWLEAQTDRQAILNENMSR--RAIHKALFESAALITASVIQ 769 + +LDE ++ + ++H +EA DR I +EN SR A+ KAL ES + ++Q Sbjct: 189 MVRLDEEIHLHKTKKHTIEAVVDRVVINSENASRIASAVEKALKESYGELEVEILQ 244
>Q28BQ6:TMED1_XENTR Transmembrane emp24 domain-containing protein 1 precursor - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 220 Score = 32.7 bits (73), Expect = 2.3 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 18/208 (8%) Frame = +2 Query: 233 MPFLHPAAAIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNG 412 + FL PA R+ECF Y G ++ + + VI + VD V +G Sbjct: 27 LTFLLPAG-------RQECFYQTTLYNG-SMEIEYQVIGG------AGLDVDFSVTTPSG 72 Query: 413 AQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK-SPYHETIDFDVHVGHYSYFDQHAKDEHF 589 + R ++ + G + CF N S E + F + FD DE Sbjct: 73 ILLIMERRRSDGVHTVEPTEAGDYMICFDNSFSTISEKLVFFELI-----FDNQQGDEEP 127 Query: 590 SPLFEQIA-------KLDEALYNIQFEQHWLEAQTDRQAIL------NENMSRRAIHKAL 730 + + KL++ +I+ + LE Q +L + N+ + + Sbjct: 128 DSWADVVEPDELLDIKLEDIKESIESVKSRLERSIQMQTVLRAFEARDRNLQDSNLERVN 187 Query: 731 FESA----ALITASVIQVYLLRRLFERK 802 F SA L+T + +QVY+L+ LF+ K Sbjct: 188 FWSAINVGVLVTVAFLQVYMLKSLFDDK 215
>Q13319:CD5R2_HUMAN Cyclin-dependent kinase 5 activator 2 precursor - Homo sapiens| (Human) Length = 367 Score = 32.3 bits (72), Expect = 3.1 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Frame = -3 Query: 267 KRIAAAGCRNGIMQRTKTQALVQLSPSMIYQQRSNSRSYRASQLPPAGGRRRNRCWRPAP 88 KR+ AA + + T P + QQR+ R + PP GG P P Sbjct: 67 KRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVP 126 Query: 87 VLPGGA----PPS 61 +P A PPS Sbjct: 127 TVPAAAATCEPPS 139
>Q08977:YP260_YEAST Uncharacterized protein YPL260W - Saccharomyces cerevisiae (Baker's| yeast) Length = 551 Score = 32.0 bits (71), Expect = 4.0 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = +2 Query: 578 DEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTD---RQAILNENMSRRAIHKALFESAAL 748 D + P++EQ+ + L N+ + W +TD Q LNE ++R K +S Sbjct: 342 DPYLQPIYEQLIDIKTTLENLMITRRWTLRETDLFSYQKKLNEIDNKRINGKFPTKSQDS 401 Query: 749 ITASVIQVYLLRRLF 793 S++ +YLLRR + Sbjct: 402 KGQSIL-LYLLRRCY 415
>Q9HNS3:GLPB_HALSA Probable anaerobic glycerol-3-phosphate dehydrogenase subunit B -| Halobacterium salinarium (Halobacterium halobium) Length = 427 Score = 31.6 bits (70), Expect = 5.2 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Frame = +2 Query: 302 VEYEGDTVHVSFVVIKADTPWHYSEDGVDLVVKDSNGAQVRDSRDKTSDKFEFIVQKRG- 478 +E G + V+ ADT + GV+ V + NGA++ +S D E+++ G Sbjct: 272 LEAAGVRIETGNPVVDADT----TAGGVETVYVEKNGARIPNSAD------EYVLATGGL 321 Query: 479 VHRFCFTNKSPYHETIDFDVHVGH----YSYFDQHAKDEH 586 V + +++ +E I FD + H Y++FD A +H Sbjct: 322 VGKGIDSDRDAVYEPI-FDCRIAHSDDRYAWFDDDAFGDH 360
>Q8WXH0:SYNE2_HUMAN Nesprin-2 - Homo sapiens (Human)| Length = 6885 Score = 31.2 bits (69), Expect = 6.8 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = +2 Query: 503 KSPYHETIDFDVHVG------HYSYFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLE 664 +S +E +F H+G H + + K +H L E I + + IQ +WLE Sbjct: 5131 ESKRYERTEFAEHLGEMNRQWHRVHGMLNRKIQHLEQLLESITESEN---KIQILNNWLE 5187 Query: 665 AQTDRQAILNENMSRRAIHKALFE 736 AQ +R L + S ++ K L + Sbjct: 5188 AQEERLKTLQKPESVISVQKLLLD 5211
>Q2KJ84:TMED5_BOVIN Transmembrane emp24 domain-containing protein 5 precursor - Bos| taurus (Bovine) Length = 226 Score = 30.8 bits (68), Expect = 8.9 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 14/136 (10%) Frame = +2 Query: 437 KTSDKFEFIVQKRGVHRFCFTN--KSPYHETIDFDVHVGHYSYFDQHAKD---------- 580 + SD I + G + FCF N + + I F++ + + +Q +D Sbjct: 86 RKSDGVHTIETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQEQEQEDWKKYITGTDM 145 Query: 581 --EHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFESAALIT 754 + E I + L Q L A R + E+ R ++ ++ Sbjct: 146 LDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVV 205 Query: 755 ASVIQVYLLRRLFERK 802 S IQVY+L+ LFE K Sbjct: 206 VSAIQVYMLKSLFEDK 221
>P07003:POXB_ECOLI Pyruvate dehydrogenase [cytochrome] - Escherichia coli| Length = 572 Score = 30.8 bits (68), Expect = 8.9 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = +1 Query: 655 LARGPNRPASNIEREHEQEGHPQGTFRVGCAHYSQRHSSLSATPTLRAQA 804 LA + P+S I + QE HPQ FR C+HY + SS P + A A Sbjct: 96 LAIAAHIPSSEIGSGYFQETHPQELFR-ECSHYCELVSSPEQIPQVLAIA 144
>P11708:MDHC_PIG Malate dehydrogenase, cytoplasmic - Sus scrofa (Pig)| Length = 334 Score = 30.8 bits (68), Expect = 8.9 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -1 Query: 620 LTLQFVQTKVKNVHLW--HADQNTNNVQHARRSLWFRDMGIYW*SRSDGHLSSEL*TQI 450 L L VKNV +W H+ +V HA+ L +++G+Y + D L E T + Sbjct: 169 LKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTV 227 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 180,079,540 Number of extensions: 4080959 Number of successful extensions: 11082 Number of sequences better than 10.0: 33 Number of HSP's gapped: 11073 Number of HSP's successfully gapped: 33 Length of query: 330 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 216 Effective length of database: 69,416,809 Effective search space: 14994030744 Effective search space used: 14994030744 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)