ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf129f09 |
|---|---|
| Clone Library Name | barley_pub |
>Os02g0822900:Os02g0822900 | Length = 855 Score = 45.1 bits (105), Expect(2) = 4e-09 Identities = 29/85 (34%), Positives = 39/85 (45%) Frame = +3 Query: 435 SKALDVLIDICGSQLLPLRFF*WYEAILILIPTAAGTLS*TSGRIRLEQVQARKVVMSED 614 SK LD L+DIC SQ +V A K++ S D Sbjct: 112 SKVLDDLLDICKSQ----------------------------------KVNASKIIFSCD 137 Query: 615 DTARGLV*LFDDHAVTEIVIGAIAD 689 D ARGL+ L DDH +T++V+GA +D Sbjct: 138 DIARGLLQLVDDHGITDLVMGAASD 162 Score = 35.8 bits (81), Expect(2) = 4e-09 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +2 Query: 707 RTPKSKKAVRVQRKANPSSRIWFVYKG 787 R P+SKKA +VQ KA+PS +IW V +G Sbjct: 170 RAPRSKKARKVQLKASPSCKIWEVNEG 196
>AK066841:Os10g0548700 | Length = 899 Score = 41.2 bits (95), Expect(2) = 1e-06 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = +2 Query: 707 RTPKSKKAVRVQRKANPSSRIWFVYKGNLICTR 805 + PKSK A+ V KANPS +IWFV K +LI TR Sbjct: 179 KLPKSKTALSVTVKANPSCKIWFVCKEHLIYTR 211 Score = 31.6 bits (70), Expect(2) = 1e-06 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGAIAD 689 +V+ K+V+ +D A G+ L H V+++V+GA AD Sbjct: 135 KVKCEKIVIENEDIANGITELILLHGVSKLVMGAAAD 171
>AK065488:Os10g0548700 | Length = 807 Score = 41.2 bits (95), Expect(2) = 1e-06 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = +2 Query: 707 RTPKSKKAVRVQRKANPSSRIWFVYKGNLICTR 805 + PKSK A+ V KANPS +IWFV K +LI TR Sbjct: 87 KLPKSKTALSVTVKANPSCKIWFVCKEHLIYTR 119 Score = 31.6 bits (70), Expect(2) = 1e-06 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGAIAD 689 +V+ K+V+ +D A G+ L H V+++V+GA AD Sbjct: 43 KVKCEKIVIENEDIANGITELILLHGVSKLVMGAAAD 79
>Os02g0665800:Os02g0665800 | Length = 900 Score = 39.3 bits (90), Expect(2) = 1e-06 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = +2 Query: 701 QSRTPKSKKAVRVQRKANPSSRIWFVYKGNLICTRYAYVAVGMDAFPSTLDPYKEHPQGQ 880 + + P SK A+++ A+PS +IWF G+LICT + + S+++ KE P + Sbjct: 78 EMKEPNSKIALKLMETASPSCKIWFTCNGHLICT-------SISSQMSSIELKKEAPSSE 130 Query: 881 GWEL 892 + L Sbjct: 131 EYTL 134 Score = 33.1 bits (74), Expect(2) = 1e-06 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGAIAD 689 + +KV++ DD A+GL L H +T +V+GA AD Sbjct: 36 KTDCQKVLIDMDDVAKGLEELITLHGITRLVMGAAAD 72
>AK104571:Os02g0734300 | Length = 160 Score = 50.1 bits (118), Expect = 9e-06 Identities = 33/58 (56%), Positives = 35/58 (60%) Frame = +2 Query: 257 MAVLVVRQGREQ*RCSASTGRRIVVGCIPYRVCXXXXXXXXXXXXISL*KGHGMMFLK 430 MAVLV RQGRE R + S G RIVVGCIPYRV I+ KGHGMMF K Sbjct: 1 MAVLVARQGRELQRYT-SAGGRIVVGCIPYRV---RSGGEMEVLVITSQKGHGMMFPK 54
>AK059780:Os02g0734300 | Length = 160 Score = 50.1 bits (118), Expect = 9e-06 Identities = 33/58 (56%), Positives = 35/58 (60%) Frame = +2 Query: 257 MAVLVVRQGREQ*RCSASTGRRIVVGCIPYRVCXXXXXXXXXXXXISL*KGHGMMFLK 430 MAVLV RQGRE R + S G RIVVGCIPYRV I+ KGHGMMF K Sbjct: 1 MAVLVARQGRELQRYT-SAGGRIVVGCIPYRV---RSGGEMEVLVITSQKGHGMMFPK 54
>AK121815:Os10g0552400 | Length = 431 Score = 39.7 bits (91), Expect(2) = 2e-05 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 15/81 (18%) Frame = +2 Query: 713 PKSKKAVRVQRKANPSSRIWFVYKGNLICTRYAYVAV-----------GMDAFPSTL--- 850 P S+ A + ++A+PS +IWFV K LICT V + G DA TL Sbjct: 135 PASRTATEIMQRADPSCKIWFVCKERLICTSGVEVEIAPGHTPFIPDTGHDALQLTLHQE 194 Query: 851 -DPYKEHPQGQGWELAEFCSA 910 D E G E+ E C A Sbjct: 195 QDDNNESELGFYDEIKEACKA 215 Score = 28.5 bits (62), Expect(2) = 2e-05 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGAIAD 689 +++ K+V+ ++ GLV L + H VT++VI A D Sbjct: 89 KMKCEKLVIENENVVDGLVELINLHGVTKLVISAAPD 125
>AK066658:Os09g0551600 | Length = 127 Score = 46.2 bits (108), Expect = 1e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGYT 2704 +GKA G+KWKS++D KA + TKAE+LK YT Sbjct: 59 IGKAGGDKWKSMTDADKAPFVTKAEKLKAEYT 90 Score = 37.0 bits (84), Expect = 0.081 Identities = 25/77 (32%), Positives = 31/77 (40%) Frame = +3 Query: 1479 RLAVKNLKAE*DPGKPKRTSSTFLVFMAALVSIRWRGXXXXXXXXXXRVLTRGRAFWFSF 1658 RL+V+ KAE DP KPKR S F VFM F Sbjct: 13 RLSVRKTKAEKDPNKPKRPPSAFFVFME------------------------------QF 42 Query: 1659 HRDSFSKDSNIKQVSLV 1709 +D K N+KQVS++ Sbjct: 43 RKDYKEKHPNVKQVSVI 59
>Os09g0569800:Os09g0569800 | Length = 858 Score = 34.3 bits (77), Expect(2) = 2e-04 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIG 677 +VQA K+V+ ++ A G+V L D H +T++V+G Sbjct: 151 KVQAEKLVIEKNSVANGIVELIDQHHITKLVMG 183 Score = 30.4 bits (67), Expect(2) = 2e-04 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +2 Query: 707 RTPKSKKAVRVQRKANPSSRIWFVYKGNLICTRYA 811 + PKSK A V ++A P +I ++ K L CTR A Sbjct: 192 QVPKSKVAAIVHQQAKPYCQILYICKEALACTREA 226
>AK066578:Os07g0210000 | Length = 700 Score = 34.7 bits (78), Expect(2) = 2e-04 Identities = 14/35 (40%), Positives = 26/35 (74%) Frame = +2 Query: 701 QSRTPKSKKAVRVQRKANPSSRIWFVYKGNLICTR 805 ++ T ++K A+ ++++A+PS +I FV+KGNL R Sbjct: 169 KTSTQRTKLAITMEKEADPSCKILFVHKGNLFSIR 203 Score = 30.0 bits (66), Expect(2) = 2e-04 Identities = 11/35 (31%), Positives = 23/35 (65%) Frame = +3 Query: 576 EQVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGA 680 E+VQA +++ D+ A GL+ +H ++ +++GA Sbjct: 130 EKVQAEAFMIANDNIAHGLIGAIQEHKISTLIMGA 164
>AK064894:Os06g0255400 | Length = 168 Score = 45.1 bits (105), Expect = 3e-04 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = +2 Query: 260 AVLVVRQGREQ*RCSASTGRRIVVGCIPYRV 352 AV+V RQGRE R S +TG R+VVGCIPYRV Sbjct: 3 AVMVARQGRELQRYSDNTGGRMVVGCIPYRV 33
>Os03g0222600:Os03g0222600 | Length = 327 Score = 42.4 bits (98), Expect = 0.002 Identities = 19/24 (79%), Positives = 19/24 (79%) Frame = +3 Query: 819 Q*GWMPSRLLLIHIKNIHKGKDGS 890 Q GWMPS L IHIKNIHKGK GS Sbjct: 207 QPGWMPSPLFSIHIKNIHKGKHGS 230
>AK068898:Os06g0728000 | Length = 157 Score = 40.8 bits (94), Expect = 0.006 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 VGKA+G++WKSL++ KA Y KA +LK Y Sbjct: 73 VGKAAGDRWKSLTEADKAPYVAKANKLKAEY 103
>AK062226:Os06g0728000 | Length = 157 Score = 40.8 bits (94), Expect = 0.006 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 VGKA+G++WKSL++ KA Y KA +LK Y Sbjct: 73 VGKAAGDRWKSLTEADKAPYVAKANKLKAEY 103
>AF541859:Os06g0728000 | Length = 157 Score = 40.8 bits (94), Expect = 0.006 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 VGKA+G++WKSL++ KA Y KA +LK Y Sbjct: 73 VGKAAGDRWKSLTEADKAPYVAKANKLKAEY 103
>AF093632:Os06g0728000 | Length = 157 Score = 40.8 bits (94), Expect = 0.006 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 VGKA+G++WKSL++ KA Y KA +LK Y Sbjct: 73 VGKAAGDRWKSLTEADKAPYVAKANKLKAEY 103
>AK102556:Os10g0100500 | Length = 811 Score = 30.0 bits (66), Expect(2) = 0.008 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 579 QVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGAIAD 689 QVQA +V + G++ L DH +T++V+G+ D Sbjct: 130 QVQASLLVTENEQIHDGIITLVKDHGITKLVMGSTPD 166 Score = 29.3 bits (64), Expect(2) = 0.008 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 725 KAVRVQRKANPSSRIWFVYKGNLICTRYAYVAVG 826 KA + R A IWFV++G I TR A A+G Sbjct: 177 KASFMARNAPSFCEIWFVWRGRHIWTREAAAAIG 210
>AK069900:Os08g0101100 | Length = 203 Score = 36.6 bits (83), Expect = 0.11 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 V K GE+WKS+SD K Y KA +LK Y Sbjct: 123 VAKEGGERWKSMSDEDKKPYLDKAAELKAEY 153
>AB079636:Os02g0670400 | Length = 145 Score = 36.6 bits (83), Expect = 0.11 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 V KA+GEKW+++S+ +KA Y KA Q K Y Sbjct: 64 VSKAAGEKWRAMSEQEKAPYVDKAGQKKQDY 94
>X89891:Os04g0511200 | Length = 244 Score = 34.3 bits (77), Expect = 0.52 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +3 Query: 828 WMPSRLLLIHIKNIHKGKDGS 890 W+PS L IHIKNIH+ K GS Sbjct: 122 WIPSLLFPIHIKNIHRAKHGS 142
>AK073764:Os10g0548300 | Length = 652 Score = 33.5 bits (75), Expect = 0.89 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 707 RTPKSKKAVRVQRKANPSSRIWFVYKGNLICTRYA 811 + P+S+ A+ V ++A+ IWF+ G L C R A Sbjct: 66 KAPQSQTAISVMQRAHSYCNIWFICNGKLTCVREA 100
>AK121769:Os12g0145900 | Length = 203 Score = 32.0 bits (71), Expect = 2.6 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Frame = +2 Query: 434 QQGPRRPHRHLRKSTPPPSFFLMV*GDPHFDPHRRRDAELNEWSHSIGAGSGAQGRHVR- 610 +Q RR R LR PP G H P R A ++ G Q R R Sbjct: 24 RQERRRLRRRLRPGAPPQP------GARHCPPRRLHRAGAGGQQAAVAGGRRVQLRRARP 77 Query: 611 -GRHREGAG 634 G HREGAG Sbjct: 78 RGAHREGAG 86
>AK106765:Os03g0810300 | Length = 183 Score = 32.0 bits (71), Expect = 2.6 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = +2 Query: 257 MAVLVVRQGREQ*RCSASTGRRIVVGCIPYR 349 M LV R GR Q R GRR+V GCIP+R Sbjct: 1 MCDLVARTGRHQQRYE--DGRRLVAGCIPFR 29
>AK107375:Os07g0212300 | Length = 182 Score = 31.6 bits (70), Expect = 3.4 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = +2 Query: 257 MAVLVVRQGREQ*RCSASTGRRIVVGCIPYR 349 M LV R GR Q R GRR+V GCIP+R Sbjct: 1 MCDLVARTGRHQQRYEH--GRRLVAGCIPFR 29
>AK120614:Os04g0564600 | Length = 132 Score = 31.2 bits (69), Expect = 4.4 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +2 Query: 2609 VGKASGEKWKSLSDVKKASY 2668 V KA+GEKW+++SD +KA Y Sbjct: 56 VTKAAGEKWRAMSDEEKAQY 75
>AK063625:Os04g0510900 | Length = 144 Score = 30.8 bits (68), Expect = 5.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 825 GWMPSRLLLIHIKNIHKGKDGS 890 GW+PS I+I NIH+ K GS Sbjct: 22 GWLPSPFFPIYIHNIHRSKHGS 43
>AK060594:Os01g0532800 | Length = 320 Score = 30.8 bits (68), Expect = 5.8 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 557 RSAQRPGGGGDQNEDRLIPSEKTKGEELTSADVDE 453 R ++P GG +N D IPSE G++ + VDE Sbjct: 159 RRRKKPLGGSRENTDDFIPSEPWDGDDFCNDHVDE 193
>Os08g0520600:Os08g0520600 | Length = 235 Score = 30.8 bits (68), Expect = 5.8 Identities = 25/86 (29%), Positives = 35/86 (40%) Frame = +1 Query: 94 KAEARAQREPLLLALVPRHGRG*GRALVTRGAASRVHGDGRGADQAWEPAQDSKDGSSCG 273 +A++R R LL G G ALV G+A GD D + ++ G Sbjct: 119 EADSRTVRR-LLSGAEEEEEDGAGMALVPWGSAPAAAGDSMAEDTVGVSSSSEEEEEEDG 177 Query: 274 EAGARAVAVQREHRQAHRGGVHSVPG 351 E A A+ V+ E AH G + G Sbjct: 178 EGSAEAMEVEEE--GAHLAGAGAAAG 201
>Os05g0464200:Os05g0464200 | Length = 461 Score = 30.8 bits (68), Expect = 5.8 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = +1 Query: 157 G*GRALVTRGAASRVHGDGRGADQAWEPAQDSKDGSSCGEAGAR 288 G GRA RG S G G QA S+DG GE G+R Sbjct: 158 GDGRAAGERGGGSARQASGGGRRQASAGGGQSRDGRVAGERGSR 201
>Os07g0201300:Os07g0201300 | Length = 551 Score = 30.4 bits (67), Expect = 7.5 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +1 Query: 145 RHGRG*GRALVTRGAASRVHGDGRGADQAWEPAQDSKDGSSCGEAGARA 291 R+GRG GRA R G Q W A +K CG G A Sbjct: 498 RYGRGRGRAATARRRRGTSGAAATGDHQGWTTAASAKYAVRCGGGGPLA 546
>AK107647: | Length = 318 Score = 30.4 bits (67), Expect = 7.5 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Frame = +1 Query: 151 GRG*GRALVTRGAASRVHGDGRGADQAWEPAQDSKDGSSCGEA----GARAVAVQREHRQ 318 G+G G A T G A R GDG + EP Q + G C A G A R Sbjct: 50 GQGGGGARRTSGQAGRA-GDGAQEPREGEPGQQQRAGRECVGAYAVDGGACGAACARRRF 108 Query: 319 AHRGGV 336 H+G V Sbjct: 109 GHQGAV 114
>D29711: | Length = 97 Score = 30.0 bits (66), Expect = 9.8 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +3 Query: 1470 CQRRLAVKNLKAE*DPGKPKRTSSTFLVF 1556 C V+ AE DP KPKR S F VF Sbjct: 34 CXXXXXVRKXXAEKDPNKPKRPPSAFFVF 62
>AK070270:Os02g0258200 | Length = 269 Score = 30.0 bits (66), Expect = 9.8 Identities = 10/32 (31%), Positives = 22/32 (68%) Frame = +2 Query: 2606 QVGKASGEKWKSLSDVKKASYFTKAEQLKVGY 2701 ++G+ +GE+WK++S+ +KA + A + + Y Sbjct: 77 EIGRITGEEWKAMSEAEKAPFEAAARKQREEY 108
>AK068054:Os07g0210000 | Length = 672 Score = 30.0 bits (66), Expect = 9.8 Identities = 11/35 (31%), Positives = 23/35 (65%) Frame = +3 Query: 576 EQVQARKVVMSEDDTARGLV*LFDDHAVTEIVIGA 680 E+VQA +++ D+ A GL+ +H ++ +++GA Sbjct: 128 EKVQAEAFMIANDNIAHGLIGAIQEHKISTLIMGA 162
>AK071382:Os07g0481000 | Length = 380 Score = 30.0 bits (66), Expect = 9.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 Query: 957 QALEIKVELRAFRTVLALQNSASSHPCPCGCSLYG 853 Q L + +++ FR +A+ NSA PC C ++G Sbjct: 337 QPLRVPIQVNPFRQPVAVDNSALCLPCYSNCFVFG 371 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 76,425,725 Number of extensions: 1646651 Number of successful extensions: 5000 Number of sequences better than 10.0: 35 Number of HSP's gapped: 4990 Number of HSP's successfully gapped: 45 Length of query: 995 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 885 Effective length of database: 10,995,345 Effective search space: 9730880325 Effective search space used: 9730880325 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
