ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf126m11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067664:Os11g0490600 328 5e-90
2AK104957:Os11g0490600 195 9e-50
3AK072610:Os02g0520100 34 0.35
4AK120546:Os08g0207600 32 1.7
5AK073315:Os08g0207600 32 1.7
6AK100192:Os01g0726700 31 3.0
7AK111280:Os01g0955000 30 3.9
8Os02g0549800:Os02g0549800 30 6.6
9AK109107: 30 6.6
10Os03g0840500:Os03g0840500 29 8.7
11AK072286:Os05g0453300 29 8.7

>AK067664:Os11g0490600 |
          Length = 416
 Score =  328 bits (842), Expect = 5e-90
 Identities = 217/427 (50%), Positives = 245/427 (57%), Gaps = 38/427 (8%)
 Frame = +3

Query: 27   MTLLGWMHRKLRSNNDVFKDFNTPGGGACNCIAGLASPD---DEYYGDDVFIANHPSPPV 197
            M LLGWMHRKLRSNNDVFK+FNT GGGACNCI GLASPD   D + GDD   A H SPPV
Sbjct: 1    MKLLGWMHRKLRSNNDVFKEFNTGGGGACNCITGLASPDHDNDYFSGDD---AAHASPPV 57

Query: 198  NADDXXXXXXXXXXXXXXXXXXAVNVPXXXXXXXXXXXXXXXCVDIDLDSMDGTTDEVDN 377
             A D                  AV +P                VD   D   G T E D+
Sbjct: 58   TAGDLFTFGGSGLLTIGTLGIAAVAIPSGGDDDDYDIDFE---VDATSDDDGGFTVEDDD 114

Query: 378  GNVDDGAVTPTFTFP-----QLEPSCVEKVMVSVEAIAEKDDGTTTEDDLMLVSAELEKV 542
             +V  GAVTPTFTFP     +   + VEK + +VEAIAEKDD TTTEDDLM+VSAELEKV
Sbjct: 115  ADVG-GAVTPTFTFPAATAAEAVVATVEKAVAAVEAIAEKDDDTTTEDDLMVVSAELEKV 173

Query: 543  LGGSNVPSARVSFAM--GIDCPLQGFLLGSPVCSDTESWPE----------KPNGGGRRA 686
            LGG +V SARVSFAM  G+DCPLQGFL GSPV SD ES PE             GGGRR 
Sbjct: 174  LGGVDVASARVSFAMGGGVDCPLQGFLFGSPV-SDVESRPEYLQAPRDSSGSCGGGGRRT 232

Query: 687  SLGELFMRTRFTEEKGALVSVQESXXXXXXXXXXXXXXXXXNH---------KRTKKWRX 839
            SLGELFMRTRF +EK ALV+V E                  +           + +K + 
Sbjct: 233  SLGELFMRTRFADEKVALVAVAEGEDGVAGDDGAAAAGVGGDRAGKGGGYKTMKKRKVKD 292

Query: 840  XXXXXXXXXXXPASTTAKSKFQKILKIFHRKVYPESTM----PNKKNRKRGPPDNSGGGG 1007
                         +T  KSKFQKIL+IFHRKVYPE+T+      KK+R RG  DN GG  
Sbjct: 293  EKGGGGAAGGGMPATVTKSKFQKILQIFHRKVYPENTLLTRNLTKKSRNRGATDNGGGAV 352

Query: 1008 AT---DEPVISPT--AKKTGPRRLSFGCCCTKRSFSASPVVDGGEELNGDKSGHWIKTDA 1172
            AT   D P+ SP    +K  P R  FG CCT  +F AS    G  E+NG+KSGHWIKTDA
Sbjct: 353  ATGDPDGPLASPVLRCRKDHPMR-GFG-CCTNGAFGASS-PGGNAEMNGNKSGHWIKTDA 409

Query: 1173 DYLVLEL 1193
            DYLVLEL
Sbjct: 410  DYLVLEL 416



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>AK104957:Os11g0490600 |
          Length = 253

 Score =  195 bits (495), Expect = 9e-50
 Identities = 128/257 (49%), Positives = 148/257 (57%), Gaps = 30/257 (11%)
 Frame = +3

Query: 513  MLVSAELEKVLGGSNVPSARVSFAMG--IDCPLQGFLLGSPVCSDTESWPE--------- 659
            M+VSAELEKVLGG +V SARVSFAMG  +DCPLQGFL GSPV SD ES PE         
Sbjct: 1    MVVSAELEKVLGGVDVASARVSFAMGGGVDCPLQGFLFGSPV-SDVESRPEYLQAPRDSS 59

Query: 660  -KPNGGGRRASLGELFMRTRFTEEKGALVSVQESXXXXXXXXXXXXXXXXXNHK------ 818
                GGGRR SLGELFMRTRF +EK ALV+V E                  +        
Sbjct: 60   GSCGGGGRRTSLGELFMRTRFADEKVALVAVAEGEDGVAGDDGAAAAGVGGDRAGKGGGY 119

Query: 819  ---RTKKWRXXXXXXXXXXXXPASTTAKSKFQKILKIFHRKVYPESTMPN----KKNRKR 977
               + +K +              +T  KSKFQKIL+IFHRKVYPE+T+      KK+R R
Sbjct: 120  KTMKKRKVKDEKGGGGAAGGGMPATVTKSKFQKILQIFHRKVYPENTLLTRNLTKKSRNR 179

Query: 978  GPPDNSGGGGAT---DEPVISPT--AKKTGPRRLSFGCCCTKRSFSASPVVDGGEELNGD 1142
            G  DN GG  AT   D P+ SP    +K  P R  FGCC      ++SP   G  E+NG+
Sbjct: 180  GATDNGGGAVATGDPDGPLASPVLRCRKDHPMR-GFGCCTNGAFGASSP--GGNAEMNGN 236

Query: 1143 KSGHWIKTDADYLVLEL 1193
            KSGHWIKTDADYLVLEL
Sbjct: 237  KSGHWIKTDADYLVLEL 253



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>AK072610:Os02g0520100 |
          Length = 204

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 606 QGFLLGSPVCSDTESWPEKPNGGGRRASLGELFMRTRFTEEKGALVSVQE 755
           +G++    V  + ESWPE+   G R  S GE +   R+   + AL ++ E
Sbjct: 120 KGYIFAMEVTEELESWPEQATHGRRWVSPGEAYQLCRYEWMREALTALLE 169



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>AK120546:Os08g0207600 |
          Length = 210

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 256 PSVPMVRRPLPPKVKRSSALTGGEGW 179
           P  P+  RPLPP+ +R  A+  GEGW
Sbjct: 109 PEAPV--RPLPPRARRRGAVREGEGW 132



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>AK073315:Os08g0207600 |
          Length = 210

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 256 PSVPMVRRPLPPKVKRSSALTGGEGW 179
           P  P+  RPLPP+ +R  A+  GEGW
Sbjct: 109 PEAPV--RPLPPRARRRGAVREGEGW 132



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>AK100192:Os01g0726700 |
          Length = 662

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 939  PESTMPNKKNRKRGPPDNSGGGGATDEPVISPTAKKTGPRRLSFGCCCTKRSFSASPVVD 1118
            P  T P+  +    P    GGGG T  P  +P +  +G  R + G C T       P   
Sbjct: 230  PSDTPPSPSSGS-SPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCSTPTPCGTPPAPS 288

Query: 1119 GG 1124
             G
Sbjct: 289  SG 290



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>AK111280:Os01g0955000 |
          Length = 255

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 978  GPPDNSGGGGATDEPVISPTA 1040
            G PD  GGGG   EPV+ P A
Sbjct: 51   GEPDKDGGGGGDGEPVVRPHA 71



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>Os02g0549800:Os02g0549800 |
          Length = 273

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 905  KDPENLPQESLPRKHYAEQEESQARSPGQQRRWRCHRR 1018
            ++ +  P   LP    A+  E +A   G +RRW+ H R
Sbjct: 190  REEKRSPDPPLPSTPMADPREGRAERMGSRRRWQIHAR 227



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>AK109107: |
          Length = 230

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +3

Query: 936  YPESTMPNKKNRKRGPPDNSGGGGATDEPVISPTAKKTGPRR---LSFGCCCTKRSFSAS 1106
            YP S++P+K +   G P     G A+ +PV+   +K + P      S     T    + +
Sbjct: 85   YPVSSVPSKPSSVPGYPVYPPSGPASSKPVVPVYSKPSKPEESCVSSTTITVTVPYPTGT 144

Query: 1107 PVVDGGEELNG 1139
            P+V GG + +G
Sbjct: 145  PIVPGGPKPSG 155



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>Os03g0840500:Os03g0840500 |
          Length = 664

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 881  YNGQEQVSKDPENLPQESLPRKHYAEQE-ESQARSPGQQRRWRCHRR 1018
            ++  +Q   DPEN   E  P  H  EQE E  AR  G   + R  R+
Sbjct: 461  HHPDDQECNDPENQYHEGEPYDHVIEQEPERDARETGTSMKLRNRRK 507



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>AK072286:Os05g0453300 |
          Length = 368

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 468 AIAEKDDGTTTEDDLMLVSAELEKVLGGSNVPSARVSFAMGIDCPLQGFLLGSPVCSDTE 647
           A+A + D +  ED L  +S  L  +LG      A     + +  P       S +C   +
Sbjct: 31  AVAARSDSSDEEDCLAGLSRRLAGLLGDDGERDAPPKAEVTVGSPQ------STLCGLPK 84

Query: 648 SWPEKPNGGGRRAS 689
           S  E PNGG  + S
Sbjct: 85  SGQESPNGGASQVS 98


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 42,477,232
Number of extensions: 927765
Number of successful extensions: 3598
Number of sequences better than 10.0: 11
Number of HSP's gapped: 3574
Number of HSP's successfully gapped: 13
Length of query: 557
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 451
Effective length of database: 11,155,509
Effective search space: 5031134559
Effective search space used: 5031134559
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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