| Clone Name | FLbaf126m03 |
|---|---|
| Clone Library Name | barley_pub |
>Q7XLX6:S1FA2_ORYSJ DNA-binding protein S1FA2 - Oryza sativa subsp. japonica (Rice)| Length = 80 Score = 73.2 bits (178), Expect = 8e-13 Identities = 40/80 (50%), Positives = 44/80 (55%) Frame = +1 Query: 145 MAEQFAESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXX 324 MA+QFA+SANNV+IEEVNKGLNPGMI GNYALY+YAQ Sbjct: 1 MADQFADSANNVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKP 60 Query: 325 XXXXXXXXXXXXQGVSAPGE 384 QGVSAPGE Sbjct: 61 VSKKKMKREKLKQGVSAPGE 80
>P42553:S1FA1_ORYSJ DNA-binding protein S1FA1 - Oryza sativa subsp. japonica (Rice)| Length = 76 Score = 59.3 bits (142), Expect = 1e-08 Identities = 33/75 (44%), Positives = 37/75 (49%) Frame = +1 Query: 160 AESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXX 339 A+ +NN+IIEEVNKGLNPG I GNYALY+YAQ Sbjct: 2 ADQSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKK 61 Query: 340 XXXXXXXQGVSAPGE 384 QGVSAPGE Sbjct: 62 LKREKLKQGVSAPGE 76
>P42554:S1FA_MAIZE DNA-binding protein S1FA - Zea mays (Maize)| Length = 63 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/63 (41%), Positives = 27/63 (42%) Frame = +1 Query: 196 NKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSA 375 NKGLNPGM+ GNYALY YAQ QGVSA Sbjct: 1 NKGLNPGMVVXLVVASFLLIFFVGNYALYXYAQKTLPPKKKKPVSKKKLKKEKLKQGVSA 60 Query: 376 PGE 384 PGE Sbjct: 61 PGE 63
>Q42337:S1FA2_ARATH DNA-binding protein S1FA2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 76 Score = 35.8 bits (81), Expect = 0.14 Identities = 22/73 (30%), Positives = 27/73 (36%) Frame = +1 Query: 166 SANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXX 345 SA ++E KGLNPG+I NY +Y+YAQ Sbjct: 6 SAGKAVVEA--KGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLK 63 Query: 346 XXXXXQGVSAPGE 384 QGV PGE Sbjct: 64 REKLKQGVPVPGE 76
>Q93VI0:S1FA3_ARATH DNA-binding protein S1FA3 - Arabidopsis thaliana (Mouse-ear cress)| Length = 73 Score = 34.7 bits (78), Expect = 0.32 Identities = 20/63 (31%), Positives = 23/63 (36%) Frame = +1 Query: 196 NKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSA 375 +KGLNPG+I GN+ LY YAQ QGV Sbjct: 11 SKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGVQV 70 Query: 376 PGE 384 PGE Sbjct: 71 PGE 73
>P42552:S1FA_SPIOL DNA-binding protein S1FA - Spinacia oleracea (Spinach)| Length = 70 Score = 34.3 bits (77), Expect = 0.41 Identities = 20/62 (32%), Positives = 23/62 (37%) Frame = +1 Query: 199 KGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSAP 378 KGLNPG+I GN+ LY YAQ QGV+ P Sbjct: 9 KGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLKQGVAPP 68 Query: 379 GE 384 GE Sbjct: 69 GE 70
>P42551:S1FA1_ARATH DNA-binding protein S1FA1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 76 Score = 34.3 bits (77), Expect = 0.41 Identities = 20/62 (32%), Positives = 22/62 (35%) Frame = +1 Query: 199 KGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSAP 378 KGLNPG+I NY LY+YAQ QGV P Sbjct: 15 KGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVPVP 74 Query: 379 GE 384 GE Sbjct: 75 GE 76
>Q96P88:GNRR2_HUMAN Gonadotropin-releasing hormone II receptor - Homo sapiens (Human)| Length = 379 Score = 30.0 bits (66), Expect = 7.8 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 404 LMSIALCWAPFYLIKKTYQLEPQRLFM*KPCLEWYIVGIGHL 529 L++ LCW P+YL+ Y P L P L + +G L Sbjct: 270 LLTFILCWTPYYLLGMWYWFSPTMLTEVPPSLSHILFLLGLL 311 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 105,285,071 Number of extensions: 2085976 Number of successful extensions: 4776 Number of sequences better than 10.0: 8 Number of HSP's gapped: 4773 Number of HSP's successfully gapped: 8 Length of query: 218 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 109 Effective length of database: 70,788,284 Effective search space: 7715922956 Effective search space used: 7715922956 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)