ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf129b04 |
|---|---|
| Clone Library Name | barley_pub |
>Q84W91:ZFNL1_ARATH Zinc finger CCCH domain-containing protein ZFN-like 1 - Arabidopsis| thaliana (Mouse-ear cress) Length = 468 Score = 152 bits (385), Expect = 4e-36 Identities = 114/395 (28%), Positives = 162/395 (41%), Gaps = 8/395 (2%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+RPG +CA+YMRT C Y C+++HP+ + + + +A YPER G+P C Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPR--DRASV---EATVRATGQYPERFGEPPC 96 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 F++KTG CKFG+ CKF+HPK +G +S+ + LNI Sbjct: 97 QFYLKTGTCKFGASCKFHHPK--------NAGGSMSH--------VPLNI---------- 130 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKDM- 994 PV+ + C +Y K G+CK G CKF H + Sbjct: 131 ------YGYPVREGD------------------NECSYYLKTGQCKFGITCKFHHPQPAG 166 Query: 995 ----EAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKG-MPIRPGEVDC 1159 P+S + G L Q + G M + PG V Sbjct: 167 TTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPI 226 Query: 1160 SFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPS-FDFRAAHVPIEPEPIT 1336 + S A S+ L LP + ++ + + Sbjct: 227 PGW-SPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQA 285 Query: 1337 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 1516 +P+RPGE C +Y KTG CKF CKFHHP DR P + +L+ G P R Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPP---------RANCVLSPIGLPLRP 336 Query: 1517 DAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVS 1621 + C +Y++ G CKFG CKFDH P+G + N S Sbjct: 337 GVQRCTFYVQNGFCKFGSTCKFDH-PMGTIRYNPS 370 Score = 124 bits (310), Expect = 2e-27 Identities = 69/164 (42%), Positives = 86/164 (52%), Gaps = 1/164 (0%) Frame = +2 Query: 1121 SKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFR 1300 S P RPG DC++Y++TG C YG CR+NHP + ASV R Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR--DRASV--------------EATVR 82 Query: 1301 AAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQP 1480 A YP+R GE C FY KTG CKF CKFHHP ++A GS++ Sbjct: 83 ATG--------QYPERFGEPPCQFYLKTGTCKFGASCKFHHP--KNAGGSMSH------- 125 Query: 1481 VMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP-PLGEVI 1609 V L + G+P RE C+YY+KTG CKFG+ CKF HP P G + Sbjct: 126 VPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTV 169 Score = 117 bits (292), Expect = 2e-25 Identities = 97/394 (24%), Positives = 141/394 (35%), Gaps = 46/394 (11%) Frame = +2 Query: 548 PQWVPKG---GIPK--WKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 P W P G+ + W+ G +SYPERPG PDC ++++TG+C +G+ C++NHP+ Sbjct: 17 PDWTPADADTGLQESMWRLGL-GSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR--- 72 Query: 713 DGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISG 892 D+ S E+ + P + EP Sbjct: 73 --------DRASV----------------------EATVRATGQYPERFGEP-------- 94 Query: 893 NSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAV 1069 PC Y K G CK G +CKF H K+ S Sbjct: 95 ----------PCQFYLKTGTCKFGASCKFHHPKNAGGSMS-------------------- 124 Query: 1070 HDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEA---- 1237 + N G P+R G+ +CS+Y+KTG C++G C+F+HP+ Sbjct: 125 ------------HVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPP 172 Query: 1238 ------------SVVPGKILNP------AAKFLPSFDFRAAHVPI--------------E 1321 S++P + P A LP + A+ P+ Sbjct: 173 PASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPY 232 Query: 1322 PEPITYPQRPGET----VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 1489 P++ PG Y T + +P S G I K ++ Sbjct: 233 SAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQA------- 285 Query: 1490 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 FP R C YY+KTG CKFG CKF HP Sbjct: 286 ----FPERPGEPECQYYLKTGDCKFGTSCKFHHP 315 Score = 82.0 bits (201), Expect = 8e-15 Identities = 47/131 (35%), Positives = 62/131 (47%) Frame = +2 Query: 1115 QNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFD 1294 Q + P RPGE +C +Y+KTG C++G +C+F+HP VP P A + S Sbjct: 281 QKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDR-----VP-----PRANCVLS-- 328 Query: 1295 FRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQ 1474 PI P RPG C FY + GFCKF CKF HP+ G+I S+ Sbjct: 329 -----------PIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM-----GTIRYNPSAS 372 Query: 1475 QPVMLTVAGFP 1507 VA +P Sbjct: 373 SLADAPVAPYP 383
>Q8GXX7:ZFN1_ARATH Zinc finger CCCH domain-containing protein ZFN1 - Arabidopsis| thaliana (Mouse-ear cress) Length = 397 Score = 151 bits (381), Expect = 1e-35 Identities = 111/382 (29%), Positives = 156/382 (40%), Gaps = 5/382 (1%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+RPGE +C++Y+RT C++ TC+F+HP+ G+ YPER G+P+C Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE-----YPERIGQPEC 91 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 +++KTG CKFG CKF+HP+ K AG +VS L Sbjct: 92 EYYLKTGTCKFGVTCKFHHPRNK-----AGIAGRVSLNML-------------------- 126 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAK--- 988 P++ +E C ++ + G CK G CKF+H + Sbjct: 127 -------GYPLRSNEV------------------DCAYFLRTGHCKFGGTCKFNHPQPQP 161 Query: 989 -DMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSF 1165 +M P+SG D S +G G++ Sbjct: 162 TNMMVPTSGQQSYPWSRASFIASPRW--QDPSSYASLIMPQGVVPVQGWNPYSGQLGSVS 219 Query: 1166 YIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPITYPQ 1345 TG+ + R + N S NP + +P + A P +P+ Sbjct: 220 PSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSS-VPLGGYYAL-----PRENVFPE 273 Query: 1346 RPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAE 1525 RPG+ C FY KTG CKF CKFHHP DR AP +L+ G P R Sbjct: 274 RPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAP---------PPDCLLSSIGLPLRPGEP 324 Query: 1526 ACAYYMKTGACKFGVQCKFDHP 1591 C +Y + G CKFG CKFDHP Sbjct: 325 LCVFYTRYGICKFGPSCKFDHP 346 Score = 88.6 bits (218), Expect = 8e-17 Identities = 76/290 (26%), Positives = 117/290 (40%), Gaps = 11/290 (3%) Frame = +2 Query: 389 GQSDDFYSPNTMAK-RPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPK 565 G + F+ P A R+ ++ YP R E +CA+++RT CK+ TCKF+HPQ P Sbjct: 103 GVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPT 162 Query: 566 GGIPKWKEGQK---AEESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVA--G 730 + Q + S+ P D + M + + +P G+V+ G Sbjct: 163 NMMVPTSGQQSYPWSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSG 222 Query: 731 SGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCPVS---LISGNST 901 +G+ +Y +L I + S S P P+ + + Sbjct: 223 TGNDQNYRNLQQNETI------------ESGSQSQGSFSGYNPGSSVPLGGYYALPRENV 270 Query: 902 LPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHD 1075 P +P +P C Y K G CK GT CKF H +D +AP Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLL------------------ 312 Query: 1076 LVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPER 1225 +S G+P+RPGE C FY + G C++G +C+F+HP R Sbjct: 313 --------------SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMR 348 Score = 85.5 bits (210), Expect = 7e-16 Identities = 37/86 (43%), Positives = 48/86 (55%) Frame = +2 Query: 1334 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 1513 +YP+RPGE C +Y +TG C+F C+F+HP DR + A+ +P R Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE----------YPER 85 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDHP 1591 C YY+KTG CKFGV CKF HP Sbjct: 86 IGQPECEYYLKTGTCKFGVTCKFHHP 111 Score = 45.8 bits (107), Expect = 6e-04 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +2 Query: 1487 LTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGE-VIANVSKQGDGKKVVG 1651 + +P R C+YY++TG C+FG C+F+HP E VIA +G+ + +G Sbjct: 32 METGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYPERIG 87 Score = 43.9 bits (102), Expect = 0.002 Identities = 18/32 (56%), Positives = 20/32 (62%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQWV 559 P RPGE C FY R CK+ +CKFDHP V Sbjct: 318 PLRPGEPLCVFYTRYGICKFGPSCKFDHPMRV 349
>Q8L7N8:ZFN3_ARATH Zinc finger type domain-containing protein ZFN3 - Arabidopsis| thaliana (Mouse-ear cress) Length = 375 Score = 150 bits (378), Expect = 2e-35 Identities = 102/370 (27%), Positives = 144/370 (38%), Gaps = 42/370 (11%) Frame = +2 Query: 608 SYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILN 787 SYPER G+PDC ++++TG+C+FGS C+FNHP R ++I Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHD--------------------RKLVIAT 77 Query: 788 INVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGT 964 + P + +P C Y K G CK G Sbjct: 78 ARIK-------------GEYPERIGQP------------------ECEFYLKTGTCKFGV 106 Query: 965 NCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRP 1144 CKF H ++ G +G+V N P+RP Sbjct: 107 TCKFHHPRNKA------------------GIDGSV--------------SVNVLSYPLRP 134 Query: 1145 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVV-------------------------- 1246 E DCS++++ G C++G C+FNHP+ + +V Sbjct: 135 NEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTS 194 Query: 1247 ----PGKILNPAAKF------LPSFDFRAAH-VPIE----PEPITYPQRPGETVCDFYKK 1381 P ++ +P+ L S F + + VP+ P +P+RPG+ C FY K Sbjct: 195 FVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMK 254 Query: 1382 TGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACK 1561 TG CKF CKFHHP DR P +L+ G P R C +Y + G CK Sbjct: 255 TGDCKFGTVCKFHHPRDRQTP---------PPDCVLSSVGLPLRPGEPLCVFYSRYGICK 305 Query: 1562 FGVQCKFDHP 1591 FG CKFDHP Sbjct: 306 FGPSCKFDHP 315 Score = 134 bits (336), Expect = 2e-30 Identities = 94/325 (28%), Positives = 142/325 (43%), Gaps = 2/325 (0%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+R GE +CA+Y+RT C++ TC+F+HP +G+ YPER G+P+C Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE-----YPERIGQPEC 93 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 F++KTG CKFG CKF+HP+ K AG VS ++L+ + + S+ L + + Sbjct: 94 EFYLKTGTCKFGVTCKFHHPRNK-----AGIDGSVSV-NVLSYPLRPNEDDCSYFLRIGQ 147 Query: 821 SLLSGNSTL--PVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDM 994 G P S VS+ ++ P Y+ + N +D Sbjct: 148 CKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPP--RLQDP 205 Query: 995 EAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIK 1174 +SG + H S +N P RPG+ +C FY+K Sbjct: 206 SGFASGSQGGLF---------SSGFHSGNSVPLGFYALPRENV--FPERPGQPECQFYMK 254 Query: 1175 TGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPITYPQRPG 1354 TG C++G C+F+HP + + P +L+ + P RPG Sbjct: 255 TGDCKFGTVCKFHHP--RDRQTPPPDCVLS---------------------SVGLPLRPG 291 Query: 1355 ETVCDFYKKTGFCKFSERCKFHHPV 1429 E +C FY + G CKF CKF HP+ Sbjct: 292 EPLCVFYSRYGICKFGPSCKFDHPM 316 Score = 132 bits (333), Expect = 4e-30 Identities = 98/317 (30%), Positives = 136/317 (42%), Gaps = 22/317 (6%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEE--SYPERPGKP 634 YP+R G+ EC FY++T TCK+ TCKF HP+ K GI +G + SYP RP + Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPR--NKAGI----DGSVSVNVLSYPLRPNED 137 Query: 635 DCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHL--LTRAIIILNINVSFVL 808 DC +F++ G CKFG CKFNHP+ + + Y L LT SFV Sbjct: 138 DCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVA 197 Query: 809 *---LQE--SLLSGN------STLPVKPSEPCPVSLISGNSTLPVKPFKP-CPHYAK-GK 949 LQ+ SG+ S S P + + P +P +P C Y K G Sbjct: 198 NPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGD 257 Query: 950 CKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKG 1129 CK GT CKF H +D + P +S G Sbjct: 258 CKFGTVCKFHHPRDRQTPPPDCVL--------------------------------SSVG 285 Query: 1130 MPIRPGEVDCSFYIKTGSCRYGRACRFNHPER-----HNEASVVPGKILNPAAKFLPSFD 1294 +P+RPGE C FY + G C++G +C+F+HP R +N AS P L+ Sbjct: 286 LPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITTELR 345 Query: 1295 FRAAHVPIEPEPITYPQ 1345 +E +P + P+ Sbjct: 346 NLLVSSSVEAKPTSLPE 362 Score = 115 bits (289), Expect = 5e-25 Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 1/167 (0%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P R GE DC++YI+TG CR+G CRFNHP H+ V+ A Sbjct: 40 PERHGEPDCAYYIRTGLCRFGSTCRFNHP--HDRKLVI-------------------ATA 78 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSA-PGSIAKRESSQQPVML 1489 I+ E YP+R G+ C+FY KTG CKF CKFHHP +++ GS++ + Sbjct: 79 RIKGE---YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVS----------V 125 Query: 1490 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQG 1630 V +P R + + C+Y+++ G CKFG CKF+HP VS +G Sbjct: 126 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRG 172 Score = 80.5 bits (197), Expect = 2e-14 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 6/110 (5%) Frame = +2 Query: 395 SDDFYSPNTMAKRPRLESSLP---IYPQRPGEKECAFYMRTRTCKYEETCKFDHP---QW 556 S F+S N++ P +LP ++P+RPG+ EC FYM+T CK+ CKF HP Q Sbjct: 218 SSGFHSGNSV---PLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQT 274 Query: 557 VPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKK 706 P + + P RPG+P C F+ + G+CKFG CKF+HP + Sbjct: 275 PPPDCV-------LSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMR 317
>Q9SWF9:ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum| (Garden pea) Length = 417 Score = 144 bits (364), Expect = 1e-33 Identities = 110/413 (26%), Positives = 168/413 (40%), Gaps = 14/413 (3%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+ PGE +C++Y+RT C++ TC+F+HP P + K E +PER G+P+C Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHP---PNRKLAIATARMKGE--FPERLGQPEC 81 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 +++KTG CKFG+ C+F+HPK K AG +V+ LNI Sbjct: 82 QYYLKTGTCKFGATCRFHHPKDK-----AGVAGRVA-----------LNI---------- 115 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAK--DM 994 P++P+E + + G+CK G CKF H + +M Sbjct: 116 ------LGYPLRPNES-----------------ERAYYLRTGQCKFGNTCKFHHPQPSNM 152 Query: 995 EAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIK 1174 G G + + + P + Sbjct: 153 VLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSSSYVPSPRWQGPSSYAPLILPQGVVSV 212 Query: 1175 TGSCRYGRACRFNHPER-----HNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPIT- 1336 G YG P++ + G++ N + S +R+ VP+ + Sbjct: 213 PGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAYS-QYRSGSVPVGFYALQR 271 Query: 1337 ---YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP 1507 +P+RP + C FY KTG CKF C+FHHP +R P +L+ G P Sbjct: 272 DNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPA---------PDCVLSPIGLP 322 Query: 1508 RREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSK---QGDGKKVVGLS 1657 R C +Y + G CKFG CKFDH P+G NV+ G++++G S Sbjct: 323 LRPGEPLCVFYSRYGICKFGPSCKFDH-PMGIFTYNVASPLADTPGRRLLGSS 374 Score = 100 bits (250), Expect = 2e-20 Identities = 86/381 (22%), Positives = 138/381 (36%), Gaps = 44/381 (11%) Frame = +2 Query: 581 WKEGQKAEES-----YPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKV 745 W+ ++ E+ YPE PG+PDC ++++TG+C+FG+ C+FNHP + Sbjct: 12 WQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRK----------- 60 Query: 746 SYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEP-CPVSLISGNSTLPVKPFK 922 L + + + G P + +P C L +G Sbjct: 61 --------------------LAIATARMKGE--FPERLGQPECQYYLKTGT--------- 89 Query: 923 PCPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXX 1102 CK G C+F H KD + Sbjct: 90 ---------CKFGATCRFHHPKDKAGVAG------------------------------- 109 Query: 1103 XXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNP----- 1267 + N G P+RP E + ++Y++TG C++G C+F+HP+ N + G + P Sbjct: 110 -RVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSP 168 Query: 1268 ----------------AAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKF 1399 ++ ++PS ++ P P+ PQ G + G Sbjct: 169 TTPGQQSYAAGITNWSSSSYVPSPRWQG---PSSYAPLILPQ--GVVSVPGWSTYGGQMG 223 Query: 1400 SERCKFHHPVDRS-------------APGSIAKRESSQQPVMLTVAG----FPRREDAEA 1528 SE + D++ G+ ++ S PV FP R D Sbjct: 224 SESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPE 283 Query: 1529 CAYYMKTGACKFGVQCKFDHP 1591 C +YMKTG CKFG C+F HP Sbjct: 284 CQFYMKTGDCKFGAVCRFHHP 304 Score = 77.0 bits (188), Expect = 3e-13 Identities = 35/81 (43%), Positives = 50/81 (61%) Frame = +2 Query: 458 IYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPD 637 I+P+RP + EC FYM+T CK+ C+F HP+ + IP + + P RPG+P Sbjct: 274 IFPERPDQPECQFYMKTGDCKFGAVCRFHHPR---ERQIPA-PDCVLSPIGLPLRPGEPL 329 Query: 638 CPFFVKTGMCKFGSECKFNHP 700 C F+ + G+CKFG CKF+HP Sbjct: 330 CVFYSRYGICKFGPSCKFDHP 350
>Q5NAV3:ZFNL3_ORYSJ Zinc finger CCCH domain-containing protein ZFN-like 3 - Oryza sativa| subsp. japonica (Rice) Length = 466 Score = 137 bits (344), Expect = 2e-31 Identities = 68/159 (42%), Positives = 86/159 (54%) Frame = +2 Query: 1130 MPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAH 1309 +P RPGE DC +Y++TG+C YG CR+NHP A+V LN K S + Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAV-----LNGGGKTTHSAE----- 97 Query: 1310 VPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 1489 YP+RPG+ VC++Y K G CKF CK+ HP RE S Q VML Sbjct: 98 ---------YPERPGQPVCEYYMKNGTCKFGSNCKYDHP-----------REGSVQAVML 137 Query: 1490 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEV 1606 +G+P R + C YY+KTG CKFG CKF HP +G V Sbjct: 138 NSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGV 176 Score = 117 bits (294), Expect = 1e-25 Identities = 91/370 (24%), Positives = 143/370 (38%), Gaps = 21/370 (5%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+RPG+ C +YM+ TCK+ CK+DHP+ +G + + YP R G+ DC Sbjct: 98 YPERPGQPVCEYYMKNGTCKFGSNCKYDHPR---EGSV---QAVMLNSSGYPLRSGEKDC 151 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAII--------ILNINV 796 ++VKTG CKF K + G + + + + I + + Sbjct: 152 TYYVKTG------HCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQM 205 Query: 797 SFVL*LQESLLSGNSTLPVKPSEPCP-------------VSLISGNSTLPVKPFKPCPHY 937 L S LSG+ + PS P V+ G+ T+ PF H Sbjct: 206 GRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAGPFYGLSHQ 265 Query: 938 AKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQ 1117 + +++ PSS + Sbjct: 266 GPSAA-VTYGSQYAPLSSSTMPSSS---------------------------------SK 291 Query: 1118 NSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDF 1297 P RPG+ +C +Y+KTGSC++G AC+++HP+ N P + + S Sbjct: 292 QEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLN----------TPKSNCMLS--- 338 Query: 1298 RAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 1477 P+ P RPG C +Y + GFCKF CKF HP+ G+++ S+ Sbjct: 339 ----------PLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPM-----GTLSYSPSASS 383 Query: 1478 PVMLTVAGFP 1507 L +A +P Sbjct: 384 ITDLPIAPYP 393 Score = 113 bits (282), Expect = 3e-24 Identities = 96/388 (24%), Positives = 145/388 (37%), Gaps = 12/388 (3%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEES--YPERPGKPD 637 P+RPGE +C +Y+RT C Y E C+++HP+ + G K S YPERPG+P Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPR--DRAAAAVLNGGGKTTHSAEYPERPGQPV 106 Query: 638 CPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQ 817 C +++K G CKFGS CK++HP+ +G+V Sbjct: 107 CEYYMKNGTCKFGSNCKYDHPR---EGSV------------------------------- 132 Query: 818 ESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKDM 994 ++++ +S P++ E K C +Y K G CK G+ CKF H Sbjct: 133 QAVMLNSSGYPLRSGE------------------KDCTYYVKTGHCKFGSTCKFHH---- 170 Query: 995 EAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSF-YI 1171 P G E + P++P + S Y Sbjct: 171 --PEIGGVS------------------------------ETPNMYPPVQPQPISSSHPYQ 198 Query: 1172 KTGSCRYGRA-------CRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEP 1330 + GR ++P ++VVP + NP + H ++ P Sbjct: 199 HLAGWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAGP 258 Query: 1331 ITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSA-PGSIAKRESSQQPVMLTVAGFP 1507 G + Y + P+ S P S +K+E + FP Sbjct: 259 FYGLSHQGPSAAVTYGSQ-----------YAPLSSSTMPSSSSKQEPA----------FP 297 Query: 1508 RREDAEACAYYMKTGACKFGVQCKFDHP 1591 R C YY+KTG+CKFG CK+ HP Sbjct: 298 ARPGQPECQYYLKTGSCKFGSACKYHHP 325 Score = 86.3 bits (212), Expect = 4e-16 Identities = 39/85 (45%), Positives = 48/85 (56%) Frame = +2 Query: 1337 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 1516 +P RPG+ C +Y KTG CKF CK+HHP + P S ML+ G P R Sbjct: 296 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKS---------NCMLSPLGLPLRP 346 Query: 1517 DAEACAYYMKTGACKFGVQCKFDHP 1591 ++ CAYY + G CKFG CKFDHP Sbjct: 347 GSQPCAYYTQHGFCKFGPTCKFDHP 371 Score = 83.6 bits (205), Expect = 3e-15 Identities = 38/91 (41%), Positives = 50/91 (54%) Frame = +2 Query: 1340 PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRED 1519 P+RPGE C +Y +TG C + E C+++HP DR+A + + A +P R Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHS-----AEYPERPG 103 Query: 1520 AEACAYYMKTGACKFGVQCKFDHPPLGEVIA 1612 C YYMK G CKFG CK+DHP G V A Sbjct: 104 QPVCEYYMKNGTCKFGSNCKYDHPREGSVQA 134 Score = 81.3 bits (199), Expect = 1e-14 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%) Frame = +2 Query: 407 YSPNTMAKRPRLESSL-PIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKW 583 Y+P + + P S P +P RPG+ EC +Y++T +CK+ CK+ HPQ++ PK Sbjct: 277 YAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYL---NTPK- 332 Query: 584 KEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHP 700 + P RPG C ++ + G CKFG CKF+HP Sbjct: 333 SNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHP 371 Score = 80.9 bits (198), Expect = 2e-14 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 2/177 (1%) Frame = +2 Query: 902 LPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHD 1075 LP +P + C +Y + G C G NC+++H +D A + G H Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAA------------VLNGGGKTTH- 94 Query: 1076 LVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGK 1255 S P RPG+ C +Y+K G+C++G C+++HP + +V Sbjct: 95 ---------------SAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAV---- 135 Query: 1256 ILNPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 +LN + YP R GE C +Y KTG CKF CKFHHP Sbjct: 136 MLNSSG---------------------YPLRSGEKDCTYYVKTGHCKFGSTCKFHHP 171 Score = 77.8 bits (190), Expect = 1e-13 Identities = 70/307 (22%), Positives = 114/307 (37%), Gaps = 10/307 (3%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP R GEK+C +Y++T CK+ TCKF HP+ P + + P + Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLA 201 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVA---GSGDKVSYFHLLTRAIIILNINVSFVL* 811 + + GS ++P TV G +S + + A + Sbjct: 202 GWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAGPFYG 261 Query: 812 LQE-----SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKP-CPHYAK-GKCKLGTNC 970 L ++ G+ P+ S P S P +P +P C +Y K G CK G+ C Sbjct: 262 LSHQGPSAAVTYGSQYAPLS-SSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSAC 320 Query: 971 KFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGE 1150 K+ H + + P S + G+P+RPG Sbjct: 321 KYHHPQYLNTPKSNCML--------------------------------SPLGLPLRPGS 348 Query: 1151 VDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEP 1330 C++Y + G C++G C+F+HP + +P+A + +PI P P Sbjct: 349 QPCAYYTQHGFCKFGPTCKFDHP--------MGTLSYSPSASSI-------TDLPIAPYP 393 Query: 1331 ITYPQRP 1351 + Y P Sbjct: 394 LNYAVAP 400
>Q6NPN3:ZFNL3_ARATH Zinc finger CCCH domain-containing protein ZFN-like 3 - Arabidopsis| thaliana (Mouse-ear cress) Length = 465 Score = 137 bits (344), Expect = 2e-31 Identities = 100/390 (25%), Positives = 169/390 (43%), Gaps = 14/390 (3%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQ-WVPKGGIPKWKEGQKAEESYPERPGKPD 637 +P+RP E +C +Y+RT C Y C+F+HP+ P G + + G+ +PER G+P Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGE-----FPERMGQPV 102 Query: 638 CPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQ 817 C F++TG CKFG+ CK++HP++ G GD V+ ++++++ Sbjct: 103 CQHFMRTGTCKFGASCKYHHPRQ------GGGGDSVT------------PVSLNYM---- 140 Query: 818 ESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSH--AK 988 P++P E K C ++ + G+CK G+ C++ H Sbjct: 141 --------GFPLRPGE------------------KECSYFMRTGQCKFGSTCRYHHPVPP 174 Query: 989 DMEAPS-------SGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKG---MPI 1138 ++APS S + +++ Q+ G M + Sbjct: 175 GVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVL 234 Query: 1139 RPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPI 1318 PG V S + + P +SV L+P+A P++ + + Sbjct: 235 PPGMVPYSGWNPYQASVSAMPSPGTQPSM-GTSSVYGITPLSPSA---PAYQSGPSSTGV 290 Query: 1319 EPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVA 1498 + T+PQRP + C ++ +TG CKF C+FHHP++ ++P + L+ Sbjct: 291 SNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASP----------EASTLSHI 340 Query: 1499 GFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 G P R A C ++ + G CKFG CKFDH Sbjct: 341 GLPLRPGAVPCTHFAQHGICKFGPACKFDH 370 Score = 116 bits (291), Expect = 3e-25 Identities = 58/153 (37%), Positives = 76/153 (49%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P RP E DC +Y++TG C YG CRFNHP N A V+ G Sbjct: 49 PERPDEPDCIYYLRTGVCGYGSRCRFNHPR--NRAPVLGG-------------------- 86 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 + E +P+R G+ VC + +TG CKF CK+HHP S+ PV L Sbjct: 87 -LRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVT-------PVSLN 138 Query: 1493 VAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 GFP R + C+Y+M+TG CKFG C++ HP Sbjct: 139 YMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHP 171 Score = 103 bits (258), Expect = 2e-21 Identities = 90/368 (24%), Positives = 141/368 (38%), Gaps = 39/368 (10%) Frame = +2 Query: 605 ESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIIL 784 E++PERP +PDC ++++TG+C +GS C+FNHP+ + V G L T A Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNR--APVLGG--------LRTEA---- 91 Query: 785 NINVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLG 961 P + +P C H+ + G CK G Sbjct: 92 ------------------GEFPERMGQPV------------------CQHFMRTGTCKFG 115 Query: 962 TNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIR 1141 +CK+ H + G D V+ + N G P+R Sbjct: 116 ASCKYHHPR-----------------------QGGGGDSVT-------PVSLNYMGFPLR 145 Query: 1142 PGEVDCSFYIKTGSCRYGRACRFNHP----------ERHNEASVVPGKILNPAAKFLPSF 1291 PGE +CS++++TG C++G CR++HP ++ + S P + ++ +PS Sbjct: 146 PGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSS 205 Query: 1292 DFRAAHVPIEPE--PITYPQRP---GETVCDFYKKTGFCKFSERCKFH------------ 1420 + V P+ P +Y Q P G+ V G +S + Sbjct: 206 Q-QYGVVLARPQLLPGSYVQSPYGYGQMVL----PPGMVPYSGWNPYQASVSAMPSPGTQ 260 Query: 1421 -----------HPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFG 1567 P+ SAP + S V FP+R + C Y+M+TG CKFG Sbjct: 261 PSMGTSSVYGITPLSPSAPA--YQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFG 318 Query: 1568 VQCKFDHP 1591 C+F HP Sbjct: 319 TSCRFHHP 326 Score = 77.4 bits (189), Expect = 2e-13 Identities = 38/110 (34%), Positives = 56/110 (50%) Frame = +2 Query: 1334 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 1513 T+P+RP E C +Y +TG C + RC+F+HP +R+ + E+ + FP R Sbjct: 47 TFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGE---------FPER 97 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDGKKVVGLSYV 1663 C ++M+TG CKFG CK+ HP G GD V L+Y+ Sbjct: 98 MGQPVCQHFMRTGTCKFGASCKYHHPRQG-------GGGDSVTPVSLNYM 140 Score = 62.4 bits (150), Expect = 6e-09 Identities = 36/125 (28%), Positives = 58/125 (46%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P RP + +C ++++TG C++G +CRF+HP + +P A L +H+ Sbjct: 298 PQRPEQPECQYFMRTGDCKFGTSCRFHHPM----------EAASPEASTL-------SHI 340 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 + P RPG C + + G CKF CKF H + S S++ S + Sbjct: 341 GL-------PLRPGAVPCTHFAQHGICKFGPACKFDHSLGSS---SLSYSPSPSSLTDMP 390 Query: 1493 VAGFP 1507 VA +P Sbjct: 391 VAPYP 395 Score = 57.0 bits (136), Expect = 3e-07 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 2/136 (1%) Frame = +2 Query: 848 PVKPSEPCPVSLISGNSTLPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXX 1021 P S P + + T P +P +P C ++ + G CK GT+C+F H + +P + Sbjct: 279 PAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLS 338 Query: 1022 XXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRA 1201 G+P+RPG V C+ + + G C++G A Sbjct: 339 HI---------------------------------GLPLRPGAVPCTHFAQHGICKFGPA 365 Query: 1202 CRFNHPERHNEASVVP 1249 C+F+H + S P Sbjct: 366 CKFDHSLGSSSLSYSP 381
>Q5NAW2:ZFNL1_ORYSJ Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa| subsp. japonica (Rice) Length = 476 Score = 135 bits (339), Expect = 8e-31 Identities = 66/159 (41%), Positives = 87/159 (54%) Frame = +2 Query: 1130 MPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAH 1309 +P RPGE DC +Y++TG+C +G CR+NHP R + G N AA Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHP-RDRGGTEFGGGARNAAA------------ 102 Query: 1310 VPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 1489 + YP+R G+ +C++Y KTG CKF CK+HHP K++ + PVML Sbjct: 103 -------LDYPERAGQPICEYYMKTGTCKFGTNCKYHHP----------KQDGAVLPVML 145 Query: 1490 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEV 1606 +GFP R + C+YYMKTG CKFG CKF HP G V Sbjct: 146 NNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGV 184 Score = 118 bits (295), Expect = 1e-25 Identities = 106/399 (26%), Positives = 164/399 (41%), Gaps = 23/399 (5%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEE-SYPERPGKPDC 640 P+RPGE++C +Y+RT C + + C+++HP+ +GG + A YPER G+P C Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPR--DRGGTEFGGGARNAAALDYPERAGQPIC 114 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 +++KTG CKFG+ CK++HPK+ DG V ++LN Sbjct: 115 EYYMKTGTCKFGTNCKYHHPKQ--DGAVLP---------------VMLN----------- 146 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAK--- 988 NS P++ E K C +Y K G+CK GT CKF H + Sbjct: 147 -----NSGFPIRLGE------------------KECSYYMKTGQCKFGTTCKFHHPEFGG 183 Query: 989 ---------DMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIR 1141 +++PS G V S + +S +P++ Sbjct: 184 VPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPG--SYIPGSYTPMMLSSGMIPLQ 241 Query: 1142 ---PGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVP--GKILNPAAKFLPSFDFRAA 1306 P + + G+ + +A H +S + G + A+ S + + Sbjct: 242 GWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQE 301 Query: 1307 H----VPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQ 1474 H P +P+ Y R G+ C F CK+ HHP + SAP S Sbjct: 302 HGFPERPGQPD-CQYYMRTGD--CKF---GATCKY------HHPRELSAPKS-------- 341 Query: 1475 QPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 M+ P R A+ CAYY + G C++GV CK+DHP Sbjct: 342 -GYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379 Score = 80.1 bits (196), Expect = 3e-14 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Frame = +2 Query: 1340 PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAP--GSIAKRESSQQPVMLTVAGFPRR 1513 P+RPGE C +Y +TG C F +RC+++HP DR G A+ ++ +P R Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALD--------YPER 108 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDG 1636 C YYMKTG CKFG CK+ HP + V G Sbjct: 109 AGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSG 149 Score = 77.4 bits (189), Expect = 2e-13 Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 2/177 (1%) Frame = +2 Query: 902 LPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHD 1075 LP +P + C +Y + G C G C+++H +D G N A D Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFG-----------GGARNAAALD 104 Query: 1076 LVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGK 1255 P R G+ C +Y+KTG+C++G C+++HP++ + +V+P Sbjct: 105 ------------------YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQ--DGAVLPVM 144 Query: 1256 ILNPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 + N +P R GE C +Y KTG CKF CKFHHP Sbjct: 145 LNNSG----------------------FPIRLGEKECSYYMKTGQCKFGTTCKFHHP 179 Score = 75.5 bits (184), Expect = 7e-13 Identities = 32/81 (39%), Positives = 49/81 (60%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+R G+ C +YM+T TCK+ CK+ HP+ G + +P R G+ +C Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPK--QDGAV---LPVMLNNSGFPIRLGEKEC 159 Query: 641 PFFVKTGMCKFGSECKFNHPK 703 +++KTG CKFG+ CKF+HP+ Sbjct: 160 SYYMKTGQCKFGTTCKFHHPE 180 Score = 73.6 bits (179), Expect = 3e-12 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWV--PKGGIPKWKEGQKAEESYPERPGKP 634 +P+RPG+ +C +YMRT CK+ TCK+ HP+ + PK G P RPG Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGY------MVNSLCLPLRPGAQ 357 Query: 635 DCPFFVKTGMCKFGSECKFNHP 700 C ++ + G C++G CK++HP Sbjct: 358 PCAYYAQNGYCRYGVACKYDHP 379 Score = 70.1 bits (170), Expect = 3e-11 Identities = 29/105 (27%), Positives = 52/105 (49%) Frame = +2 Query: 1115 QNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFD 1294 Q G P RPG+ DC +Y++TG C++G C+++HP ++ P + ++ + Sbjct: 299 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPR----------ELSAPKSGYMVN-- 346 Query: 1295 FRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPV 1429 + P RPG C +Y + G+C++ CK+ HP+ Sbjct: 347 -----------SLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380 Score = 52.0 bits (123), Expect = 9e-06 Identities = 21/39 (53%), Positives = 29/39 (74%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIP 577 +P R GEKEC++YM+T CK+ TCKF HP++ GG+P Sbjct: 150 FPIRLGEKECSYYMKTGQCKFGTTCKFHHPEF---GGVP 185
>Q5RJC5:ZFNL5_ARATH Zinc finger CCCH domain-containing protein ZFN-like 5 - Arabidopsis| thaliana (Mouse-ear cress) Length = 435 Score = 131 bits (329), Expect = 1e-29 Identities = 102/393 (25%), Positives = 158/393 (40%), Gaps = 14/393 (3%) Frame = +2 Query: 458 IYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPD 637 +YP RP ++C+FYMRT +CKY +CKF+HP + + +E + + E P + Sbjct: 97 VYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPV---RRKLQIGRERVRERDEDVENPKLME 153 Query: 638 CPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQ 817 C ++ +TG CK+G C+F+H K+ H ++ LN Sbjct: 154 CKYYFRTGGCKYGESCRFSHMKE----------------HNSPASVPELNF--------- 188 Query: 818 ESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKD- 991 LP++P E K CP Y + G CK G++CKF+H Sbjct: 189 -------LGLPIRPGE------------------KECPFYMRNGSCKFGSDCKFNHPDPT 223 Query: 992 ----MEAP-----SSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRP 1144 +++P + G + H + + +S+G + P Sbjct: 224 AIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRG--VTP 281 Query: 1145 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKI-LNPAAKFLPSFDFRAAHVPIE 1321 D + Y +A PER + + P +N + SF + +E Sbjct: 282 QASDWNGY---------QASSAYPPER---SPLAPSSYQVNNSLAETSSFSQYQHQMSVE 329 Query: 1322 PEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAG 1501 +P+RP + C +Y KTG CKF +CK+HHP +R Q G Sbjct: 330 E----FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRL---------PKQAAFSFNDKG 376 Query: 1502 FPRREDAEACAYYMKTGACKFGVQCKFDH--PP 1594 P R D C +Y + G CKFG C+FDH PP Sbjct: 377 LPLRPDQSMCTHYSRYGICKFGPACRFDHSIPP 409 Score = 70.5 bits (171), Expect = 2e-11 Identities = 29/85 (34%), Positives = 49/85 (57%) Frame = +2 Query: 443 ESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPER 622 + S+ +P+RP + EC +Y++T CK++ CK+ H PK +PK ++ P R Sbjct: 325 QMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHH----PKNRLPKQAAFSFNDKGLPLR 380 Query: 623 PGKPDCPFFVKTGMCKFGSECKFNH 697 P + C + + G+CKFG C+F+H Sbjct: 381 PDQSMCTHYSRYGICKFGPACRFDH 405 Score = 68.2 bits (165), Expect = 1e-10 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = +2 Query: 1331 ITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPR 1510 + YP RP C FY +TG CK+ CKF+HPV R K + ++ V R Sbjct: 96 MVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRR-------KLQIGRERVR------ER 142 Query: 1511 REDAE-----ACAYYMKTGACKFGVQCKFDH 1588 ED E C YY +TG CK+G C+F H Sbjct: 143 DEDVENPKLMECKYYFRTGGCKYGESCRFSH 173 Score = 51.6 bits (122), Expect = 1e-05 Identities = 20/45 (44%), Positives = 33/45 (73%) Frame = +2 Query: 1457 KRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 + E S++ +M+ +P R D+E C++YM+TG+CK+G CKF+HP Sbjct: 86 EEEGSEKRMMMV---YPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>Q9STM4:ZFNL6_ARATH Putative zinc finger CCCH domain-containing protein ZFN-like 6 -| Arabidopsis thaliana (Mouse-ear cress) Length = 448 Score = 124 bits (311), Expect = 1e-27 Identities = 102/360 (28%), Positives = 140/360 (38%), Gaps = 24/360 (6%) Frame = +2 Query: 581 WKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHP--------------KKKDDG 718 W E + +E YP RPG DC F+++TG CKFGS CKFNHP +K+DDG Sbjct: 98 WSENE-SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156 Query: 719 TVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNS 898 G D YF N T+P P G Sbjct: 157 GKLGLIDCKYYFRTGGCKY--------------GETCRFNHTIPKSGLASAPELNFLG-- 200 Query: 899 TLPVKPFK-PCPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVH 1072 LP++P + CP+Y + G CK G CKF+H + G+NG Sbjct: 201 -LPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFR--------GNNG--- 248 Query: 1073 DLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHN-EASVVP 1249 VS Q S P V+ + +PE + +ASV Sbjct: 249 --VSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYS 306 Query: 1250 GK--ILNPAAKFLPSFDFRAAHVPI-----EPEPITYPQRPGETVCDFYKKTGFCKFSER 1408 + + +P+ +L + + + + +P+RP + C +Y KTG CKF Sbjct: 307 SERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFN 366 Query: 1409 CKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 CK+HHP +R P L G P R D C YY + G CKFG C+FDH Sbjct: 367 CKYHHPKNRL---------PKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417 Score = 103 bits (258), Expect = 2e-21 Identities = 53/153 (34%), Positives = 77/153 (50%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P+RPG DCSFY++TGSC++G +C+FNHP A KF + D + Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPL---------------ARKFQIARDNKVREK 152 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 + + G C +Y +TG CK+ E C+F+H + +S S + L Sbjct: 153 EDDGGKL------GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPE---------LN 197 Query: 1493 VAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 G P R C YYM+ G+CK+G +CKF+HP Sbjct: 198 FLGLPLRPGEVECPYYMRNGSCKYGAECKFNHP 230 Score = 99.0 bits (245), Expect = 6e-20 Identities = 75/268 (27%), Positives = 107/268 (39%), Gaps = 24/268 (8%) Frame = +2 Query: 485 ECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGM 664 +C +Y RT CKY ETC+F+H +PK G+ E P RPG+ +CP++++ G Sbjct: 163 DCKYYFRTGGCKYGETCRFNHT--IPKSGLASAPELNFL--GLPLRPGEVECPYYMRNGS 218 Query: 665 CKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNST 844 CK+G+ECKFNHP D T G D S+ +I + +F Q S S +S Sbjct: 219 CKYGAECKFNHP----DPTTIGGTDSPSFRGNNGVSIGTFSPKATF----QASSTSWSSP 270 Query: 845 LPVKPSEP-CPVSLISGNSTLPVKP----------------FKPCPHYAKGKCKLGTNCK 973 V + P PV L + P F P Y T+ Sbjct: 271 RHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSML 330 Query: 974 FSHAKDM-------EAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGM 1132 S + E P N H N KG+ Sbjct: 331 LSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHH-PKNRLPKLPPYALNDKGL 389 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNH 1216 P+RP + C++Y + G C++G ACRF+H Sbjct: 390 PLRPDQNICTYYSRYGICKFGPACRFDH 417 Score = 72.4 bits (176), Expect = 6e-12 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 +P+RP + EC++YM+T CK++ CK+ H PK +PK ++ P RP + C Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHH----PKNRLPKLPPYALNDKGLPLRPDQNIC 398 Query: 641 PFFVKTGMCKFGSECKFNH 697 ++ + G+CKFG C+F+H Sbjct: 399 TYYSRYGICKFGPACRFDH 417 Score = 64.3 bits (155), Expect = 2e-09 Identities = 34/123 (27%), Positives = 55/123 (44%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P RP + +CS+Y+KTG C++ C+++HP+ N +P LN Sbjct: 344 PERPDQPECSYYMKTGDCKFKFNCKYHHPK--NRLPKLPPYALNDKG------------- 388 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 P RP + +C +Y + G CKF C+F H V P S ++ +P ++ Sbjct: 389 --------LPLRPDQNICTYYSRYGICKFGPACRFDHSV--QPPYSTESSQAIVEPPQVS 438 Query: 1493 VAG 1501 G Sbjct: 439 ANG 441 Score = 49.3 bits (116), Expect = 6e-05 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +2 Query: 1502 FPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 +P R AE C++YM+TG+CKFG CKF+HP Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 416 NTMAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDH 547 N + K P + P RP + C +Y R CK+ C+FDH Sbjct: 374 NRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
>Q5JLB5:ZFNL2_ORYSJ Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa| subsp. japonica (Rice) Length = 439 Score = 124 bits (311), Expect = 1e-27 Identities = 65/161 (40%), Positives = 86/161 (53%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P R GE DC++Y++TG CR+G +CRFNHP+ N A A Sbjct: 78 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLA---------------------IASA 116 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 ++ E YP+R G+ C +Y KTG CKF CKFHHP +++ IA R V L Sbjct: 117 RMKGE---YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAG---IAGR------VQLN 164 Query: 1493 VAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIAN 1615 G+P R + CAYY+KTG CK+G CKF HP L +A+ Sbjct: 165 TLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMAS 205 Score = 120 bits (300), Expect = 3e-26 Identities = 98/368 (26%), Positives = 139/368 (37%), Gaps = 41/368 (11%) Frame = +2 Query: 611 YPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNI 790 YPER G+PDC ++++TG+C+FG C+FNHP+ ++ +A + K Y Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLA-IASARMKGEY------------- 122 Query: 791 NVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTN 967 P + +P C +Y K G CK G Sbjct: 123 -------------------PERMGQP------------------ECQYYLKTGTCKFGPT 145 Query: 968 CKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPG 1147 CKF H ++ G G V + N+ G P+RP Sbjct: 146 CKFHHPREKA------------------GIAGRV--------------QLNTLGYPLRPS 173 Query: 1148 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPA------------------- 1270 E +C++Y+KTG C+YG C+F+HPE N + G + P+ Sbjct: 174 EKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWA 233 Query: 1271 ---AKFLPSFDFRAAHVPIEPEPITYPQRPGETVC-DFYKKTGFCKFSERCKFHHP---- 1426 F+PS ++ P P+ PQ + + Y S + P Sbjct: 234 FPRGSFIPSPRWQN---PSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQ 290 Query: 1427 -------VDRSA--PGSIAKRESSQQPV----MLTVAGFPRREDAEACAYYMKTGACKFG 1567 VD SA G ++ SS PV + FP R D C YYMKTG CKFG Sbjct: 291 TYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFG 350 Query: 1568 VQCKFDHP 1591 CKF HP Sbjct: 351 AVCKFHHP 358 Score = 95.9 bits (237), Expect = 5e-19 Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 1/184 (0%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+R GE +C +Y+RT C++ +C+F+HPQ + K E YPER G+P+C Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQ---DRNLAIASARMKGE--YPERMGQPEC 131 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 +++KTG CKFG CKF+HP++K AG +V L Sbjct: 132 QYYLKTGTCKFGPTCKFHHPREK-----AGIAGRVQLNTL-------------------- 166 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKDME 997 P++PSE K C +Y K G+CK G CKF H + Sbjct: 167 -------GYPLRPSE------------------KECAYYLKTGQCKYGNTCKFHHPELFN 201 Query: 998 APSS 1009 A +S Sbjct: 202 AMAS 205 Score = 84.7 bits (208), Expect = 1e-15 Identities = 38/87 (43%), Positives = 47/87 (54%) Frame = +2 Query: 1337 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 1516 +P+RP + C +Y KTG CKF CKFHHP RS P +L+ G P R Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMP---------TPDCVLSPVGLPLRP 379 Query: 1517 DAEACAYYMKTGACKFGVQCKFDHPPL 1597 E C +Y + G CKFG CKFDHP + Sbjct: 380 GEELCKFYSRYGICKFGANCKFDHPTM 406 Score = 83.6 bits (205), Expect = 3e-15 Identities = 71/272 (26%), Positives = 109/272 (40%), Gaps = 19/272 (6%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQ----WVPKGGIPKWKEGQKAEESYPERPG 628 YP RP EKECA+Y++T CKY TCKF HP+ G P + + + P G Sbjct: 168 YPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTG 227 Query: 629 KPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVS--- 799 F + F ++ +P V +V ++ T ++ ++ + S Sbjct: 228 TMASWAFPRGS---FIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQ 284 Query: 800 -------FVL*LQESLLSGNSTL--PVKPSE-PCPVSLISGNSTLPVKPFKP-CPHYAK- 943 + Q +GN + P + S P P + + P +P +P C +Y K Sbjct: 285 SPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKT 344 Query: 944 GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNS 1123 G CK G CKF H + P+ D V + Sbjct: 345 GDCKFGAVCKFHHPRVRSMPTP---------------------DCV-----------LSP 372 Query: 1124 KGMPIRPGEVDCSFYIKTGSCRYGRACRFNHP 1219 G+P+RPGE C FY + G C++G C+F+HP Sbjct: 373 VGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404 Score = 82.0 bits (201), Expect = 8e-15 Identities = 36/89 (40%), Positives = 49/89 (55%) Frame = +2 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 1504 +P YP+R GE C +Y +TG C+F C+F+HP DR+ + A+ + + Sbjct: 73 QPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE----------Y 122 Query: 1505 PRREDAEACAYYMKTGACKFGVQCKFDHP 1591 P R C YY+KTG CKFG CKF HP Sbjct: 123 PERMGQPECQYYLKTGTCKFGPTCKFHHP 151 Score = 75.9 bits (185), Expect = 6e-13 Identities = 39/125 (31%), Positives = 56/125 (44%) Frame = +2 Query: 1115 QNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFD 1294 Q P RP + +C +Y+KTG C++G C+F+HP + + P +L+P Sbjct: 324 QRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPT--PDCVLSP--------- 372 Query: 1295 FRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQ 1474 + P RPGE +C FY + G CKF CKF HP G A +S Sbjct: 373 ------------VGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYGSAST 420 Query: 1475 QPVML 1489 M+ Sbjct: 421 NVPMV 425 Score = 74.7 bits (182), Expect = 1e-12 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 12/122 (9%) Frame = +2 Query: 371 GSHSTIGQSD--DFYSPNTMAKRPRLESSLPI----------YPQRPGEKECAFYMRTRT 514 G+ T G S D + N P SS P+ +P+RP + EC +YM+T Sbjct: 287 GAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGD 346 Query: 515 CKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFN 694 CK+ CKF HP+ V P + + P RPG+ C F+ + G+CKFG+ CKF+ Sbjct: 347 CKFGAVCKFHHPR-VRSMPTP---DCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFD 402 Query: 695 HP 700 HP Sbjct: 403 HP 404 Score = 47.4 bits (111), Expect = 2e-04 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGI 574 P RPGE+ C FY R CK+ CKFDHP P G+ Sbjct: 376 PLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGV 412
>Q94AD9:ZFNL4_ARATH Zinc finger CCCH domain-containing protein ZFN-like 4 - Arabidopsis| thaliana (Mouse-ear cress) Length = 404 Score = 120 bits (301), Expect = 2e-26 Identities = 60/158 (37%), Positives = 79/158 (50%), Gaps = 5/158 (3%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P RPGE DC FY++TG C YG +CR+NHP H+ Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHP----------------------------THL 76 Query: 1313 PIEPEPITY-----PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 1477 P + + Y P+R G+ C+++ KTG CK+ CK+HHP DR+ Q Sbjct: 77 P---QDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA----------Q 123 Query: 1478 PVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 PVM V G P R + C YY++TG C+FGV CKF HP Sbjct: 124 PVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHP 161 Score = 119 bits (298), Expect = 4e-26 Identities = 97/387 (25%), Positives = 134/387 (34%), Gaps = 58/387 (14%) Frame = +2 Query: 611 YPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNI 790 YP+RPG+ DC F+++TG+C +GS C++NHP V+Y+ Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQD--------VAYY------------ 83 Query: 791 NVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTN 967 LP + +P C ++ K G CK G Sbjct: 84 ---------------KEELPERIGQP------------------DCEYFLKTGACKYGPT 110 Query: 968 CKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPG 1147 CK+ H KD NGA + N G+P+R G Sbjct: 111 CKYHHPKD---------------------RNGAQPVMF------------NVIGLPMRLG 137 Query: 1148 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKF--------------LP 1285 E C +Y++TG+CR+G AC+F+HP+ N S G PAA LP Sbjct: 138 EKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLP 197 Query: 1286 SFDFRAAHVPIEPEPI-----------------------TYPQRPGETV----------- 1363 ++VPI P P G + Sbjct: 198 RPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRG 257 Query: 1364 ---------CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 1516 C F+ TG CK+ + CK+ HP R S P ++ P R Sbjct: 258 LSESSDQPECRFFMNTGTCKYGDDCKYSHP---------GVRISQPPPSLINPFVLPARP 308 Query: 1517 DAEACAYYMKTGACKFGVQCKFDHPPL 1597 AC + G CKFG CKFDHP L Sbjct: 309 GQPACGNFRSYGFCKFGPNCKFDHPML 335 Score = 97.8 bits (242), Expect = 1e-19 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 1/175 (0%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP RPGE++C FY+RT C Y +C+++HP +P+ + +KE PER G+PDC Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQD-VAYYKE------ELPERIGQPDC 96 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 +F+KTG CK+G CK++HPK + +G + F+++ Sbjct: 97 EYFLKTGACKYGPTCKYHHPKDR-------NGAQPVMFNVI------------------- 130 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSH 982 LP++ E KPCP+Y + G C+ G CKF H Sbjct: 131 -------GLPMRLGE------------------KPCPYYLRTGTCRFGVACKFHH 160 Score = 64.7 bits (156), Expect = 1e-09 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = +2 Query: 479 EKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESY--PERPGKPDCPFFV 652 + EC F+M T TCKY + CK+ HP G+ + + P RPG+P C F Sbjct: 264 QPECRFFMNTGTCKYGDDCKYSHP------GVRISQPPPSLINPFVLPARPGQPACGNFR 317 Query: 653 KTGMCKFGSECKFNHP 700 G CKFG CKF+HP Sbjct: 318 SYGFCKFGPNCKFDHP 333 Score = 45.4 bits (106), Expect = 8e-04 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQ 553 P R GEK C +Y+RT TC++ CKF HPQ Sbjct: 133 PMRLGEKPCPYYLRTGTCRFGVACKFHHPQ 162 Score = 36.2 bits (82), Expect = 0.50 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 458 IYPQRPGEKECAFYMRTRTCKYEETCKFDHP 550 + P RPG+ C + CK+ CKFDHP Sbjct: 303 VLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333
>Q9SQU4:ZFNL2_ARATH Zinc finger CCCH domain-containing protein ZFN-like 2 - Arabidopsis| thaliana (Mouse-ear cress) Length = 462 Score = 119 bits (299), Expect = 3e-26 Identities = 58/153 (37%), Positives = 79/153 (51%) Frame = +2 Query: 1133 PIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHV 1312 P RP E DC +Y++TG C YG CRFNHP + +V+ G Sbjct: 52 PERPDEPDCIYYLRTGVCGYGSRCRFNHPR--DRGAVIGG-------------------- 89 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLT 1492 + E P+R G VC + +TG CKF CK+HHP GS+A PV L+ Sbjct: 90 -VRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVA-------PVSLS 141 Query: 1493 VAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 G+P R + C+YY++TG CKFG+ C+F+HP Sbjct: 142 YLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHP 174 Score = 97.8 bits (242), Expect = 1e-19 Identities = 66/236 (27%), Positives = 93/236 (39%), Gaps = 13/236 (5%) Frame = +2 Query: 551 QWVPKGG-----IPKWKEGQKAE-------ESYPERPGKPDCPFFVKTGMCKFGSECKFN 694 +W GG P W+ G ESYPERP +PDC ++++TG+C +GS C+FN Sbjct: 19 EWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDCIYYLRTGVCGYGSRCRFN 78 Query: 695 HPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCP 874 HP +D G V G + LP + P Sbjct: 79 HP--RDRGAVIG------------------------------GVRGEAGALPERMGHPV- 105 Query: 875 VSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXX 1051 C H+ + G CK G +CK+ H P G Sbjct: 106 -----------------CQHFMRTGTCKFGASCKYHH------PRQG------------- 129 Query: 1052 GHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHP 1219 G G+V + + G P+RPGE +CS+Y++TG C++G CRFNHP Sbjct: 130 GGGGSV-----------APVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHP 174 Score = 88.6 bits (218), Expect = 8e-17 Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 1/175 (0%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDC 640 YP+RP E +C +Y+RT C Y C+F+HP+ +G + G+ + PER G P C Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPR--DRGAVIGGVRGEAG--ALPERMGHPVC 106 Query: 641 PFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQE 820 F++TG CKFG+ CK++HP++ G GS VS +L Sbjct: 107 QHFMRTGTCKFGASCKYHHPRQGGGG---GSVAPVSLSYL-------------------- 143 Query: 821 SLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKFSH 982 P++P E K C +Y + G+CK G C+F+H Sbjct: 144 -------GYPLRPGE------------------KECSYYLRTGQCKFGLTCRFNH 173 Score = 83.6 bits (205), Expect = 3e-15 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Frame = +2 Query: 890 GNSTLPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNG 1063 G + P +P +P C +Y + G C G+ C+F+H +D A G G G Sbjct: 47 GGESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVR-----------GEAG 95 Query: 1064 AVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASV 1243 A +P R G C +++TG+C++G +C+++HP + Sbjct: 96 A---------------------LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGS 134 Query: 1244 VPGKILNPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHH 1423 V P+ + YP RPGE C +Y +TG CKF C+F+H Sbjct: 135 V---------------------APVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNH 173 Query: 1424 PVDRSAPGSIAKRESSQ---QPVMLTV 1495 PV + G + + Q QP + T+ Sbjct: 174 PVPLAVQGPPQQPQQQQPQPQPQLQTI 200 Score = 79.7 bits (195), Expect = 4e-14 Identities = 73/327 (22%), Positives = 124/327 (37%), Gaps = 36/327 (11%) Frame = +2 Query: 461 YPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEE----------- 607 YP RPGEKEC++Y+RT CK+ TC+F+HP + G P+ + Q+ + Sbjct: 145 YPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTL 204 Query: 608 -----------------------SYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDG 718 SY + P P P + GM + +P + Sbjct: 205 QSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGP--PMVLPPGMVPYSGW----NPYQASLS 258 Query: 719 TVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNS 898 + G + S + L+ + + +S+ S NST + Sbjct: 259 AMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNST----------------SK 302 Query: 899 TLPVKPFKP-CPHYAK-GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVH 1072 P +P +P C ++ + G CK G++C++ H D P +G Sbjct: 303 EFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTG-------------------- 342 Query: 1073 DLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPG 1252 + +S G+P+RPG C+ + + G C++G AC+F+H S+ Sbjct: 343 ------------IVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH-------SMSSS 383 Query: 1253 KILNPAAKFLPSFDFRAAHVPIEPEPI 1333 +P+A L +P+ P PI Sbjct: 384 LSYSPSASSL-------TDMPVAPYPI 403 Score = 77.0 bits (188), Expect = 3e-13 Identities = 32/84 (38%), Positives = 46/84 (54%) Frame = +2 Query: 1337 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 1516 +PQRP + C ++ +TG CKF C++HHPVD P + ++L+ G P R Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPP---------KTGIVLSSIGLPLRP 354 Query: 1517 DAEACAYYMKTGACKFGVQCKFDH 1588 C ++ + G CKFG CKFDH Sbjct: 355 GVAQCTHFAQHGICKFGPACKFDH 378 Score = 76.3 bits (186), Expect = 4e-13 Identities = 33/79 (41%), Positives = 47/79 (59%) Frame = +2 Query: 464 PQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCP 643 P+R G C +MRT TCK+ +CK+ HP+ GG + YP RPG+ +C Sbjct: 98 PERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGG--SVAPVSLSYLGYPLRPGEKECS 155 Query: 644 FFVKTGMCKFGSECKFNHP 700 ++++TG CKFG C+FNHP Sbjct: 156 YYLRTGQCKFGLTCRFNHP 174 Score = 73.2 bits (178), Expect = 4e-12 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 12/124 (9%) Frame = +2 Query: 362 PIMGSHSTIGQSDDF----YSPNTMAKR------PRLESSLPIYPQRPGEKECAFYMRTR 511 P G+ +IG S + SP+ A P S+ +PQRP + EC ++MRT Sbjct: 261 PSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTG 320 Query: 512 TCKYEETCKFDHP--QWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSEC 685 CK+ +C++ HP PK GI G P RPG C F + G+CKFG C Sbjct: 321 DCKFGSSCRYHHPVDAVPPKTGIVLSSIG------LPLRPGVAQCTHFAQHGICKFGPAC 374 Query: 686 KFNH 697 KF+H Sbjct: 375 KFDH 378 Score = 65.5 bits (158), Expect = 8e-10 Identities = 36/121 (29%), Positives = 52/121 (42%) Frame = +2 Query: 1121 SKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFR 1300 SK P RP + +C ++++TG C++G +CR++HP VP K Sbjct: 301 SKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHP-----VDAVPPK--------------- 340 Query: 1301 AAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQP 1480 I I P RPG C + + G CKF CKF H + S S + + P Sbjct: 341 ---TGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMP 397 Query: 1481 V 1483 V Sbjct: 398 V 398 Score = 45.8 bits (107), Expect = 6e-04 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +2 Query: 1502 FPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 FP+R D C Y+M+TG CKFG C++ HP Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHP 333
>O48772:ZFN2_ARATH Zinc finger CCCH domain-containing protein ZFN2 - Arabidopsis| thaliana (Mouse-ear cress) Length = 453 Score = 112 bits (280), Expect = 5e-24 Identities = 59/164 (35%), Positives = 78/164 (47%), Gaps = 5/164 (3%) Frame = +2 Query: 1115 QNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFD 1294 + S P RPGE DC F+++TG C YG +CR+NHP Sbjct: 36 EQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHP------------------------- 70 Query: 1295 FRAAHVPIEPEPITY-----PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 1459 + P+ I Y P+R G+ C+ TG CK+ CK+HHP DR+ G Sbjct: 71 -----LTNLPQGIIYYRDQLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAG---- 117 Query: 1460 RESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 1591 PV+ V G P R+ + C YYM+TG C+FGV CKF HP Sbjct: 118 ------PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155 Score = 92.8 bits (229), Expect = 4e-18 Identities = 87/347 (25%), Positives = 125/347 (36%), Gaps = 11/347 (3%) Frame = +2 Query: 584 KEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLL 763 ++ + YP+RPG+ DC FF++TG C +G+ C+ Y H L Sbjct: 32 EDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCR--------------------YNHPL 71 Query: 764 TRAIIILNINVSFVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK 943 T L + ++ LP + +P Sbjct: 72 TN--------------LPQGIIYYRDQLPERVGQP---------------------DCET 96 Query: 944 GKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNS 1123 G CK G CK+ H KD NGA L N Sbjct: 97 GACKYGPTCKYHHPKD---------------------RNGAGPVLF------------NV 123 Query: 1124 KGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPS--FDF 1297 G+P+R GE C +Y++TG CR+G AC+F+HP H++ S G + F PS F + Sbjct: 124 LGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPS--NGHSAYAMSSF-PSVGFPY 180 Query: 1298 RAAHVPIEPEPITY-----PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKR 1462 + + P TY PQ P Y + + S P K Sbjct: 181 ASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKT 240 Query: 1463 E---SSQQPVMLTVAGFPRREDAEA-CAYYMKTGACKFGVQCKFDHP 1591 + SS V +TV A C ++M TG CK+G CK+ HP Sbjct: 241 QLDSSSSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHP 287 Score = 90.5 bits (223), Expect = 2e-17 Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 1/192 (0%) Frame = +2 Query: 440 LESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPE 619 +E S P YP RPGE++C F++RT C Y +C+++HP GI ++ + PE Sbjct: 35 MEQSSP-YPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYR------DQLPE 87 Query: 620 RPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVS 799 R G+PDC +TG CK+G CK++HPK ++ G+G ++ N+ Sbjct: 88 RVGQPDC----ETGACKYGPTCKYHHPKDRN-----GAGP------------VLFNV--- 123 Query: 800 FVL*LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAK-GKCKLGTNCKF 976 LP++ E KPCP+Y + G C+ G CKF Sbjct: 124 -------------LGLPMRQGE------------------KPCPYYMQTGLCRFGVACKF 152 Query: 977 SHAKDMEAPSSG 1012 H PS+G Sbjct: 153 HHPHPHSQPSNG 164 Score = 63.9 bits (154), Expect = 2e-09 Identities = 31/90 (34%), Positives = 43/90 (47%) Frame = +2 Query: 1154 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 1333 +C F++ TG+C+YG C+++HP+ S P +LNP I Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQS--PPTLLNP---------------------I 302 Query: 1334 TYPQRPGETVCDFYKKTGFCKFSERCKFHH 1423 P RPG+ C +K GFCKF CKF H Sbjct: 303 VLPARPGQPACGNFKAYGFCKFGANCKFDH 332 Score = 62.4 bits (150), Expect = 6e-09 Identities = 30/71 (42%), Positives = 38/71 (53%) Frame = +2 Query: 485 ECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGM 664 EC F+M T TCKY + CK+ HP K + + P RPG+P C F G Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHP----KERLLQSPPTLLNPIVLPARPGQPACGNFKAYGF 321 Query: 665 CKFGSECKFNH 697 CKFG+ CKF+H Sbjct: 322 CKFGANCKFDH 332 Score = 59.3 bits (142), Expect = 5e-08 Identities = 28/78 (35%), Positives = 35/78 (44%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 1543 C F+ TG CK+ + CK+ HP +R P +L P R AC + Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPKERLL---------QSPPTLLNPIVLPARPGQPACGNFK 317 Query: 1544 KTGACKFGVQCKFDHPPL 1597 G CKFG CKFDH L Sbjct: 318 AYGFCKFGANCKFDHSML 335 Score = 49.7 bits (117), Expect = 4e-05 Identities = 36/119 (30%), Positives = 49/119 (41%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL 808 + +C FF+ TG CK+G +CK++HPK++ LL +LN V Sbjct: 264 RAECRFFMNTGTCKYGDDCKYSHPKER----------------LLQSPPTLLNPIV---- 303 Query: 809 *LQESLLSGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHA 985 LP +P +P GN FK A G CK G NCKF H+ Sbjct: 304 ------------LPARPGQPA-----CGN-------FK-----AYGFCKFGANCKFDHS 333 Score = 33.5 bits (75), Expect = 3.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 458 IYPQRPGEKECAFYMRTRTCKYEETCKFDH 547 + P RPG+ C + CK+ CKFDH Sbjct: 303 VLPARPGQPACGNFKAYGFCKFGANCKFDH 332
>Q6C922:YTH1_YARLI mRNA 3'-end-processing protein YTH1 - Yarrowia lipolytica (Candida| lipolytica) Length = 193 Score = 46.6 bits (109), Expect = 4e-04 Identities = 44/193 (22%), Positives = 64/193 (33%), Gaps = 9/193 (4%) Frame = +2 Query: 926 CPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXX 1105 C H+ +G CK G NC+F H Sbjct: 60 CKHWLRGLCKKGLNCEFLH----------------------------------------- 78 Query: 1106 XLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLP 1285 E N + MP +C FY+K G C C++ H ++PA+K Sbjct: 79 --EYNLQKMP------ECQFYVKNGFCTQSPDCQYLH--------------IDPASKIPV 116 Query: 1286 SFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP---------VDRS 1438 F++ + PE R C+ Y TGFC C+F HP + + Sbjct: 117 CFNYEKGFCKMGPECSRKHIR--RMPCELY-MTGFCPKGRVCEFAHPKFVGIYDYMIIKP 173 Query: 1439 APGSIAKRESSQQ 1477 P AK E+ Q+ Sbjct: 174 NPKDKAKDETKQE 186 Score = 33.9 bits (76), Expect = 2.5 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%) Frame = +2 Query: 485 ECAFYMRTRTCKYEETCKFDHPQWVPKGGIP---KWKEG--QKAEESYPERPGKPDCPFF 649 EC FY++ C C++ H P IP +++G + E + + C + Sbjct: 87 ECQFYVKNGFCTQSPDCQYLHID--PASKIPVCFNYEKGFCKMGPECSRKHIRRMPCELY 144 Query: 650 VKTGMCKFGSECKFNHPK 703 + TG C G C+F HPK Sbjct: 145 M-TGFCPKGRVCEFAHPK 161 Score = 32.7 bits (73), Expect = 5.5 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Frame = +2 Query: 404 FYSPNTMAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDH--PQWVPKGGIP 577 F +P+ P LE + P C +++ C +C H P ++ K Sbjct: 3 FETPSRFKFTPYLEREYQ-FGLDPNRPLCRGFLQFDGCPRGNSCPDKHLAPTFLNKIVCK 61 Query: 578 KW-----KEGQKAEESYPERPGK-PDCPFFVKTGMCKFGSECKFNH 697 W K+G E + K P+C F+VK G C +C++ H Sbjct: 62 HWLRGLCKKGLNCEFLHEYNLQKMPECQFYVKNGFCTQSPDCQYLH 107
>Q09176:U2AF1_SCHPO Splicing factor U2AF 23 kDa subunit - Schizosaccharomyces pombe| (Fission yeast) Length = 216 Score = 45.4 bits (106), Expect = 8e-04 Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 24/171 (14%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRACRFNHPE-RHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 1324 +V+CSFY K G+CR+G C H + ++ + P NP EP Sbjct: 15 KVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH---------------EP 59 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSE-----------------------RCKFHHPVDR 1435 + QR D + + FC+FS+ R K+ + Sbjct: 60 NGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESA-Q 118 Query: 1436 SAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 +A + R SQ+PV ++ P + EAC +T C+ G C F H Sbjct: 119 NAIDDLNSRWYSQRPVYAELS--PVTDFREACCRQHETSECQRGGLCNFMH 167
>Q5KMN5:YTH1_CRYNE mRNA 3'-end-processing protein YTH1 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 332 Score = 41.6 bits (96), Expect = 0.012 Identities = 45/204 (22%), Positives = 64/204 (31%), Gaps = 2/204 (0%) Frame = +2 Query: 839 STLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDMEAPSSGXX 1018 S L KP P P L V C HY + CK+G NC+++H Sbjct: 75 SQLNFKPPPPLPAHPREREKKLTV-----CKHYLRNLCKMGDNCEYTH------------ 117 Query: 1019 XXXXXXXXXXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGR 1198 + N + MP+ C +++K G C G Sbjct: 118 -------------------------------DFNLRTMPV------CIWFVKQGKCELGG 140 Query: 1199 ACRFNHP-ERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE-PITYPQRPGETVCDF 1372 C + HP +R E D+ + P P + +R +CD Sbjct: 141 ECLYFHPRDRRVECP-----------------DYNRGFCVLGPNCPRKHIRR---RLCDA 180 Query: 1373 YKKTGFCKFSERCKFHHPVDRSAP 1444 Y GFC + CK HP P Sbjct: 181 Y-AAGFCPDGKDCKLAHPSPNRPP 203 Score = 37.4 bits (85), Expect = 0.22 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 5/90 (5%) Frame = +2 Query: 455 PIYPQRPGEKE-----CAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPE 619 P P P E+E C Y+R CK + C++ H + Sbjct: 83 PPLPAHPREREKKLTVCKHYLRN-LCKMGDNCEYTH--------------------DFNL 121 Query: 620 RPGKPDCPFFVKTGMCKFGSECKFNHPKKK 709 R P C +FVK G C+ G EC + HP+ + Sbjct: 122 RT-MPVCIWFVKQGKCELGGECLYFHPRDR 150
>P32505:NAB2_YEAST Nuclear polyadenylated RNA-binding protein NAB2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 525 Score = 40.0 bits (92), Expect = 0.034 Identities = 47/172 (27%), Positives = 67/172 (38%), Gaps = 14/172 (8%) Frame = +2 Query: 1121 SKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFR 1300 +K P++ G V C F G+ +C F HP NE + V + + + R Sbjct: 328 AKRKPVQTGIVLCKF----GALCSNPSCPFGHPTPANEDAKVIDLMWCDKNLTCDNPECR 383 Query: 1301 AAHVPI----EPEPITYPQRPGETVCDFYKKTGFCKF-----SERCKFHHPVDRSAPGSI 1453 AH + E +PI+ + V K CKF ++RCK+ H A I Sbjct: 384 KAHSSLSKIKEVKPISQKKAAPPPV---EKSLEQCKFGTHCTNKRCKYRH-----ARSHI 435 Query: 1454 AKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCK-----FDHPP 1594 RE + + + G P ED C+FGV CK F HPP Sbjct: 436 MCREGANCTRIDCLFGHPINED------------CRFGVNCKNIYCLFRHPP 475
>Q6ZPZ3:CS007_MOUSE Zinc finger CCCH domain-containing protein C19orf7 homolog - Mus| musculus (Mouse) Length = 1304 Score = 39.7 bits (91), Expect = 0.045 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 9/102 (8%) Frame = +2 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 1504 +P + G+ +C ++ + G C + + C F H ++ + K + GF Sbjct: 382 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCK---------FYITGF 431 Query: 1505 PRREDAEACAY---------YMKTGACKFGVQCKFDHPPLGE 1603 R AE C Y Y TG C G C F H PL E Sbjct: 432 CAR--AENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTE 471 Score = 38.1 bits (87), Expect = 0.13 Identities = 26/112 (23%), Positives = 37/112 (33%) Frame = +2 Query: 926 CPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXX 1105 C ++ +G+C G +C FSH D+E P N Sbjct: 395 CKYFVEGRCTWGDHCNFSH--DIELPKKRELCKFYITGFCARAEN--------------- 437 Query: 1106 XLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKIL 1261 P G+ C Y TG+C G C F+H E + K+L Sbjct: 438 --------CPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKML 481
>Q9UPT8:CS007_HUMAN Zinc finger CCCH domain-containing protein C19orf7 - Homo sapiens| (Human) Length = 1303 Score = 39.7 bits (91), Expect = 0.045 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 9/102 (8%) Frame = +2 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 1504 +P + G+ +C ++ + G C + + C F H ++ + K + GF Sbjct: 383 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCK---------FYITGF 432 Query: 1505 PRREDAEACAY---------YMKTGACKFGVQCKFDHPPLGE 1603 R AE C Y Y TG C G C F H PL E Sbjct: 433 CAR--AENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTE 472 Score = 38.1 bits (87), Expect = 0.13 Identities = 26/112 (23%), Positives = 37/112 (33%) Frame = +2 Query: 926 CPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXX 1105 C ++ +G+C G +C FSH D+E P N Sbjct: 396 CKYFVEGRCTWGDHCNFSH--DIELPKKRELCKFYITGFCARAEN--------------- 438 Query: 1106 XLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKIL 1261 P G+ C Y TG+C G C F+H E + K+L Sbjct: 439 --------CPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKML 482
>P47973:TTP_RAT Tristetraproline - Rattus norvegicus (Rat)| Length = 320 Score = 39.3 bits (90), Expect = 0.059 Identities = 21/78 (26%), Positives = 36/78 (46%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C Y ++G C++ +C+F H PG + R++++ P T E C + Sbjct: 101 LCRTYSESGRCRYGAKCQFAH-----GPGEL--RQANRHPKYKT----------ELCHKF 143 Query: 1541 MKTGACKFGVQCKFDHPP 1594 G C +G +C F H P Sbjct: 144 YLQGRCPYGSRCHFIHNP 161 Score = 32.7 bits (73), Expect = 5.5 Identities = 22/97 (22%), Positives = 37/97 (38%) Frame = +2 Query: 422 MAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKA 601 ++ P ++ P R + C Y + C+Y C+F H G + ++ + Sbjct: 80 LSPSPTSPTATPTTSSRYKTELCRTYSESGRCRYGAKCQFAH-------GPGELRQANRH 132 Query: 602 EESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + E C F G C +GS C F H +D Sbjct: 133 PKYKTEL-----CHKFYLQGRCPYGSRCHFIHNPTED 164 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 1511 REDAEACAYYMKTGACKFGVQCKFDHPP 1594 R E C Y ++G C++G +C+F H P Sbjct: 96 RYKTELCRTYSESGRCRYGAKCQFAHGP 123
>P47980:TIS1_DROME Protein TIS11 - Drosophila melanogaster (Fruit fly)| Length = 436 Score = 39.3 bits (90), Expect = 0.059 Identities = 25/97 (25%), Positives = 38/97 (39%) Frame = +2 Query: 1298 RAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 1477 R P+ P+ R +C +++ G CK+ E+C+F H GS R + Sbjct: 119 RTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAH-------GSHELRNVHRH 171 Query: 1478 PVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 P T E C + G C +G +C F H Sbjct: 172 PKYKT----------EYCRTFHSVGFCPYGPRCHFVH 198 Score = 32.0 bits (71), Expect = 9.4 Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 8/121 (6%) Frame = +2 Query: 359 RPIMGSHSTIGQSDDFYSPNTMAKRPRLESSLPIYPQRPGEKE------CAFYMRTRTCK 520 +P + S TI +++ + N K R +S P+ PQ+P C + CK Sbjct: 95 QPAVASLVTI--TENLGNMNLHRKLERTQSE-PLPPQQPMNTSRYKTELCRPFEEAGECK 151 Query: 521 YEETCKFDHPQWVPKG--GIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFN 694 Y E C+F H + PK+K C F G C +G C F Sbjct: 152 YGEKCQFAHGSHELRNVHRHPKYKTEY--------------CRTFHSVGFCPYGPRCHFV 197 Query: 695 H 697 H Sbjct: 198 H 198
>Q8VDM1:ZGPAT_MOUSE Zinc finger CCCH-type with G patch domain-containing protein - Mus| musculus (Mouse) Length = 511 Score = 38.9 bits (89), Expect = 0.077 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 911 KPFKPCPHYAKGKCKLGTNCKFSHAK 988 K KPCP + +GKC+ NC+FSH + Sbjct: 174 KSLKPCPFFLEGKCRFKENCRFSHGQ 199 Score = 32.3 bits (72), Expect = 7.2 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 452 LPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWV 559 L +YP K C F++ + C+++E C+F H Q V Sbjct: 167 LYLYPTHKSLKPCPFFLEGK-CRFKENCRFSHGQVV 201 Score = 32.3 bits (72), Expect = 7.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 611 YPERPGKPDCPFFVKTGMCKFGSECKFNH 697 YP CPFF++ G C+F C+F+H Sbjct: 170 YPTHKSLKPCPFFLE-GKCRFKENCRFSH 197
>Q8N5A5:ZGPAT_HUMAN Zinc finger CCCH-type with G patch domain-containing protein - Homo| sapiens (Human) Length = 531 Score = 38.9 bits (89), Expect = 0.077 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 911 KPFKPCPHYAKGKCKLGTNCKFSHAK 988 K KPCP + +GKC+ NC+FSH + Sbjct: 175 KSLKPCPFFLEGKCRFKENCRFSHGQ 200 Score = 32.3 bits (72), Expect = 7.2 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 452 LPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWV 559 L +YP K C F++ + C+++E C+F H Q V Sbjct: 168 LYLYPTHKSLKPCPFFLEGK-CRFKENCRFSHGQVV 202 Score = 32.3 bits (72), Expect = 7.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 611 YPERPGKPDCPFFVKTGMCKFGSECKFNH 697 YP CPFF++ G C+F C+F+H Sbjct: 171 YPTHKSLKPCPFFLE-GKCRFKENCRFSH 198
>P26651:TTP_HUMAN Tristetraproline - Homo sapiens (Human)| Length = 326 Score = 38.9 bits (89), Expect = 0.077 Identities = 23/93 (24%), Positives = 40/93 (43%) Frame = +2 Query: 1334 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 1513 T P R +C + ++G C++ +C+F H G R++++ P T Sbjct: 99 TTPSRYKTELCRTFSESGRCRYGAKCQFAH-------GLGELRQANRHPKYKT------- 144 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIA 1612 E C + G C +G +C F H P ++ A Sbjct: 145 ---ELCHKFYLQGRCPYGSRCHFIHNPSEDLAA 174 Score = 33.5 bits (75), Expect = 3.2 Identities = 21/97 (21%), Positives = 38/97 (39%) Frame = +2 Query: 422 MAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKA 601 ++ P ++ P R + C + + C+Y C+F H G+ + ++ + Sbjct: 87 LSPSPTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAH-------GLGELRQANRH 139 Query: 602 EESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + E C F G C +GS C F H +D Sbjct: 140 PKYKTEL-----CHKFYLQGRCPYGSRCHFIHNPSED 171 Score = 33.5 bits (75), Expect = 3.2 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%) Frame = +2 Query: 1505 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDGKKVVGLSYVLEN*TRS 1684 P R E C + ++G C++G +C+F H LGE+ R Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAH-GLGEL------------------------RQ 135 Query: 1685 SSPSP-FRVCFCHQSISNRMCIFGCLYVYIDNGLK*FLHT--PPVLQQNI 1825 ++ P ++ CH+ C +G +I N + PPVL+Q+I Sbjct: 136 ANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSEDLAAPGHPPVLRQSI 185
>Q9UTD1:YTH1_SCHPO mRNA 3'-end-processing protein yth1 - Schizosaccharomyces pombe| (Fission yeast) Length = 170 Score = 38.1 bits (87), Expect = 0.13 Identities = 42/177 (23%), Positives = 53/177 (29%), Gaps = 1/177 (0%) Frame = +2 Query: 476 GEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVK 655 G C ++R CK E C F H + K P C F+ + Sbjct: 50 GSVVCKHWLRG-LCKKGEQCDFLHEYNLKK---------------------MPPCHFYAE 87 Query: 656 TGMCKFGSECKFNH-PKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQESLLS 832 G C G EC + H K G A N+ F Sbjct: 88 RGWCSNGEECLYLHLDPSKQVGVCAW-------------------YNMGF---------- 118 Query: 833 GNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDMEAP 1003 CP+ I V+ +PCP Y G C LG NC +H K E P Sbjct: 119 ------------CPLGPICRGKH--VRKPRPCPKYLAGFCPLGPNCPDAHPKHSEPP 161
>O74463:YQC1_SCHPO Uncharacterized protein C1739.01 - Schizosaccharomyces pombe (Fission| yeast) Length = 547 Score = 38.1 bits (87), Expect = 0.13 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +2 Query: 830 SGNSTLPVKPSEPCPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDMEAP 1003 S STLP E +G ST+ PC + G C G NC FSH+ + E P Sbjct: 22 SAKSTLPKNTPE-------NGVSTVKNLQHVPCKFFRNGTCTAGENCPFSHSLETERP 72
>P53781:TTP_BOVIN Tristetraproline - Bos taurus (Bovine)| Length = 324 Score = 38.1 bits (87), Expect = 0.13 Identities = 27/110 (24%), Positives = 46/110 (41%) Frame = +2 Query: 1283 PSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKR 1462 PS D+ + P T + E +C + ++G C++ +C+F H G R Sbjct: 81 PSSDWSPSPTSPTATPTTSSRYKTE-LCRTFSESGRCRYGAKCQFAH-------GLGELR 132 Query: 1463 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIA 1612 ++S+ P T E C + G C +G +C F H P ++ A Sbjct: 133 QASRHPKYKT----------ELCHKFYLQGRCPYGSRCHFIHNPSEDLAA 172 Score = 33.1 bits (74), Expect = 4.2 Identities = 21/93 (22%), Positives = 36/93 (38%) Frame = +2 Query: 434 PRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESY 613 P ++ P R + C + + C+Y C+F H G+ + ++ + + Sbjct: 89 PTSPTATPTTSSRYKTELCRTFSESGRCRYGAKCQFAH-------GLGELRQASRHPKYK 141 Query: 614 PERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 E C F G C +GS C F H +D Sbjct: 142 TEL-----CHKFYLQGRCPYGSRCHFIHNPSED 169
>Q8IXZ2:ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 - Homo sapiens (Human)| Length = 948 Score = 37.0 bits (84), Expect = 0.29 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 2/112 (1%) Frame = +2 Query: 1436 SAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIAN 1615 S S+A R + ++ A R + E C YY + G C G +C + H P + Sbjct: 642 SCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCT 701 Query: 1616 VSKQGDGKKVVGLSYVLEN*TRSSSPSPFRVC--FCHQSISNRMCIFGCLYV 1765 +G KK G + ++ P VC F SN C + +YV Sbjct: 702 RFVRGTCKKTDGTCPFSHHVSKEKMP----VCSYFLKGICSNSNCPYSHVYV 749
>Q64707:U2AFL_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 - Mus musculus (Mouse) Length = 428 Score = 37.0 bits (84), Expect = 0.29 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNH 697 +P CPF+ KTG C+FG+ C H Sbjct: 160 RPSCPFYNKTGACRFGNRCSRKH 182 Score = 36.2 bits (82), Expect = 0.50 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP--RREDAEACA 1534 C FY KTG C+F RC H S+P + K M T G RR+D ++ A Sbjct: 163 CPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKS-------MFTTFGMEQCRRDDYDSDA 214 Score = 32.0 bits (71), Expect = 9.4 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 1526 ACAYYMKTGACKFGVQCKFDH 1588 +C +Y KTGAC+FG +C H Sbjct: 162 SCPFYNKTGACRFGNRCSRKH 182
>Q9D883:U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit - Mus musculus (Mouse)| Length = 239 Score = 37.0 bits (84), Expect = 0.29 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 1324 +V+CSFY K G+CR+G C R ++ ++ + NP + R A +E Sbjct: 15 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 74 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERC-------------KFHHPVD-RSAPGSIAKR 1462 + Y + E + +K G + C KF D A + R Sbjct: 75 QE-HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133 Query: 1463 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 + QP+ ++ P + EAC + G C G C F H Sbjct: 134 WFNGQPIHAELS--PVTDFREACCRQYEMGECTRGGFCNFMH 173
>Q01081:U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit - Homo sapiens (Human)| Length = 240 Score = 37.0 bits (84), Expect = 0.29 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 1324 +V+CSFY K G+CR+G C R ++ ++ + NP + R A +E Sbjct: 15 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 74 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERC-------------KFHHPVD-RSAPGSIAKR 1462 + Y + E + +K G + C KF D A + R Sbjct: 75 QE-HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133 Query: 1463 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 + QP+ ++ P + EAC + G C G C F H Sbjct: 134 WFNGQPIHAELS--PVTDFREACCRQYEMGECTRGGFCNFMH 173
>A1A4K8:U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit - Bos taurus (Bovine)| Length = 237 Score = 37.0 bits (84), Expect = 0.29 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 1324 +V+CSFY K G+CR+G C R ++ ++ + NP + R A +E Sbjct: 15 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 74 Query: 1325 EPITYPQRPGETVCDFYKKTGFCKFSERC-------------KFHHPVD-RSAPGSIAKR 1462 + Y + E + +K G + C KF D A + R Sbjct: 75 QE-HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133 Query: 1463 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 + QP+ ++ P + EAC + G C G C F H Sbjct: 134 WFNGQPIHAELS--PVTDFREACCRQYEMGECTRGGFCNFMH 173
>P22893:TTP_MOUSE Tristetraproline - Mus musculus (Mouse)| Length = 319 Score = 36.6 bits (83), Expect = 0.38 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C Y ++G C++ +C+F H G R++++ P T E C + Sbjct: 100 LCRTYSESGRCRYGAKCQFAH-------GLGELRQANRHPKYKT----------ELCHKF 142 Query: 1541 MKTGACKFGVQCKFDHPP 1594 G C +G +C F H P Sbjct: 143 YLQGRCPYGSRCHFIHNP 160 Score = 34.7 bits (78), Expect = 1.4 Identities = 22/97 (22%), Positives = 38/97 (39%) Frame = +2 Query: 422 MAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKA 601 ++ P ++ P R + C Y + C+Y C+F H G+ + ++ + Sbjct: 79 LSPSPTSPTATPTTSSRYKTELCRTYSESGRCRYGAKCQFAH-------GLGELRQANRH 131 Query: 602 EESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + E C F G C +GS C F H +D Sbjct: 132 PKYKTEL-----CHKFYLQGRCPYGSRCHFIHNPTED 163
>Q9H000:MKRN2_HUMAN Makorin-2 - Homo sapiens (Human)| Length = 416 Score = 36.6 bits (83), Expect = 0.38 Identities = 44/166 (26%), Positives = 61/166 (36%), Gaps = 16/166 (9%) Frame = +2 Query: 1157 CSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI- 1333 C +Y K G C YG CR++ H S G + A +PS F + H P E Sbjct: 37 CKYYQK-GYCAYGTRCRYD----HTRPSAAAGGAVGTMAHSVPSPAFHSPHPPSEVTASI 91 Query: 1334 --TYPQRPG--ETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESS--QQPVMLTV 1495 T PG E + +ER P S PGS + + S +P Sbjct: 92 VKTNSHEPGKREKRTLVLRDRNLSGMAERKT--QPSMVSNPGSCSDPQPSPEMKPHSYLD 149 Query: 1496 AGFPRREDAEACAYYMK---------TGACKFGVQCKFDHPPLGEV 1606 A +D EA + Y G C+FG C + H + E+ Sbjct: 150 AIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDACVYLHGEVCEI 195 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/72 (26%), Positives = 27/72 (37%) Frame = +2 Query: 1373 YKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTG 1552 Y G C+ +C F H + S P +I C YY K G Sbjct: 10 YFMHGVCREGSQCLFSHDLANSKPSTI-------------------------CKYYQK-G 43 Query: 1553 ACKFGVQCKFDH 1588 C +G +C++DH Sbjct: 44 YCAYGTRCRYDH 55 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 911 KPFKPCPHYAKGKCKLGTNCKFSHAKDMEA 1000 KP C +Y KG C GT C++ H + A Sbjct: 32 KPSTICKYYQKGYCAYGTRCRYDHTRPSAA 61
>P47976:CTH1_YEAST Zinc finger protein CTH1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 325 Score = 36.6 bits (83), Expect = 0.38 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Frame = +2 Query: 1313 PIEPEPITYPQRPGETV-----CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 1477 P P+ PQ +T+ C+ + G+CK+ +C+F H ++ K+ ++ + Sbjct: 188 PCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNEL---KFKKKSNNYR 244 Query: 1478 PVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 1588 + C + K G C +G +C F H Sbjct: 245 --------------TKPCINWSKLGYCPYGKRCCFKH 267 Score = 33.9 bits (76), Expect = 2.5 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = +2 Query: 515 CKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFN 694 CKY C+F H G+ + K +K+ +Y +P C + K G C +G C F Sbjct: 219 CKYGNKCQFAH-------GLNELKFKKKSN-NYRTKP----CINWSKLGYCPYGKRCCFK 266 Query: 695 HPKKKD 712 H KD Sbjct: 267 HGDDKD 272
>Q59T36:YTH1_CANAL mRNA 3'-end-processing protein YTH1 - Candida albicans (Yeast)| Length = 215 Score = 36.2 bits (82), Expect = 0.50 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Frame = +2 Query: 485 ECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKW--------KEGQKAEESYPERPGKPDC 640 EC FY + C C + H P+ IP+ EG + + R C Sbjct: 98 ECLFYSKNGYCTQTSECLYLHVD--PQSKIPECLNYNQGFCSEGPNCKNRHVRRVL---C 152 Query: 641 PFFVKTGMCKFGSECKFNHPK 703 P ++ G C G EC+F HPK Sbjct: 153 PLYLY-GFCPKGPECEFTHPK 172
>Q6S9E0:TTP_SHEEP Tristetraproline - Ovis aries (Sheep)| Length = 325 Score = 36.2 bits (82), Expect = 0.50 Identities = 21/84 (25%), Positives = 36/84 (42%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C + ++G C++ +C+F H G R+ S+ P T E C + Sbjct: 106 LCRTFSESGRCRYGAKCQFAH-------GLGELRQPSRHPKYKT----------ELCHKF 148 Query: 1541 MKTGACKFGVQCKFDHPPLGEVIA 1612 G C +G +C F H P ++ A Sbjct: 149 YLQGRCPYGSRCHFIHNPSEDLAA 172 Score = 32.7 bits (73), Expect = 5.5 Identities = 21/97 (21%), Positives = 38/97 (39%) Frame = +2 Query: 422 MAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKA 601 ++ P ++ P R + C + + C+Y C+F H G+ + ++ + Sbjct: 85 LSPSPTSPTATPTTSSRYKTELCRTFSESGRCRYGAKCQFAH-------GLGELRQPSRH 137 Query: 602 EESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + E C F G C +GS C F H +D Sbjct: 138 PKYKTEL-----CHKFYLQGRCPYGSRCHFIHNPSED 169
>Q7ZWS1:DUS3L_XENLA tRNA-dihydrouridine synthase 3-like - Xenopus laevis (African clawed| frog) Length = 640 Score = 36.2 bits (82), Expect = 0.50 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Frame = +2 Query: 1391 CKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEA-CAYYMKTGACKFG 1567 C F ++CKF H V + SQ+P ED C Y G C +G Sbjct: 140 CFFGDKCKFSHDVAKYV---------SQKP-----------EDIRPNCHLYETFGKCIYG 179 Query: 1568 VQCKFDHPPLGEVIANV-----SKQGDGKKVV 1648 V C+F LGE N+ K+ +GK +V Sbjct: 180 VTCRFAKSHLGEDFKNIINEELMKEWEGKVLV 211
>Q5FVR7:CPSF4_RAT Cleavage and polyadenylation specificity factor subunit 4 - Rattus| norvegicus (Rat) Length = 243 Score = 36.2 bits (82), Expect = 0.50 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 Query: 869 CPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDM 994 CP ISG T+ C H+ +G CK G C+F H DM Sbjct: 55 CPFRHISGEKTVV------CKHWLRGLCKKGDQCEFLHEYDM 90
>Q8BQZ5:CPSF4_MOUSE Cleavage and polyadenylation specificity factor subunit 4 - Mus| musculus (Mouse) Length = 211 Score = 36.2 bits (82), Expect = 0.50 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 Query: 869 CPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDM 994 CP ISG T+ C H+ +G CK G C+F H DM Sbjct: 55 CPFRHISGEKTVV------CKHWLRGLCKKGDQCEFLHEYDM 90
>O95639:CPSF4_HUMAN Cleavage and polyadenylation specificity factor subunit 4 - Homo| sapiens (Human) Length = 269 Score = 36.2 bits (82), Expect = 0.50 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 Query: 869 CPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDM 994 CP ISG T+ C H+ +G CK G C+F H DM Sbjct: 55 CPFRHISGEKTVV------CKHWLRGLCKKGDQCEFLHEYDM 90
>O19137:CPSF4_BOVIN Cleavage and polyadenylation specificity factor subunit 4 - Bos| taurus (Bovine) Length = 243 Score = 36.2 bits (82), Expect = 0.50 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 Query: 869 CPVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNCKFSHAKDM 994 CP ISG T+ C H+ +G CK G C+F H DM Sbjct: 55 CPFRHISGEKTVV------CKHWLRGLCKKGDQCEFLHEYDM 90
>Q758T3:YTH1_ASHGO mRNA 3'-end-processing protein YTH1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 209 Score = 35.8 bits (81), Expect = 0.65 Identities = 39/189 (20%), Positives = 60/189 (31%), Gaps = 3/189 (1%) Frame = +2 Query: 869 CPVSLISGNS-TLPVKPFK-PCPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXX 1042 CP + N LP+ K C H+ +G CK C++ H Sbjct: 46 CPNGTLCPNKHVLPIFQNKIVCKHWLRGLCKKNDQCEYLH-------------------- 85 Query: 1043 XXXGHNGAVHDLVSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPE 1222 E N + MP +C F+ K G C C++ H Sbjct: 86 -----------------------EYNLRKMP------ECVFFTKNGYCTQSPECQYLH-- 114 Query: 1223 RHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE-PITYPQRPGETVCDFYKKTGFCKF 1399 ++P +K D+R P+ P + ++ +C Y TGFC Sbjct: 115 ------------IDPTSKVQQCEDYRMGFCPLGTACPCKHVKK---IICPKY-VTGFCPL 158 Query: 1400 SERCKFHHP 1426 C + HP Sbjct: 159 GRDCDWEHP 167 Score = 33.5 bits (75), Expect = 3.2 Identities = 19/77 (24%), Positives = 33/77 (42%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 1543 C F+ K G+C S C++ H +D ++ + + E + P + + Sbjct: 95 CVFFTKNGYCTQSPECQYLH-IDPTS--KVQQCEDYRMGFCPLGTACPCKHVKKIICPKY 151 Query: 1544 KTGACKFGVQCKFDHPP 1594 TG C G C ++HPP Sbjct: 152 VTGFCPLGRDCDWEHPP 168
>Q62377:U2AFM_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 2 - Mus musculus (Mouse) Length = 462 Score = 35.8 bits (81), Expect = 0.65 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 1459 C FY KTG C+F +RC H S+P + K Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 207 Score = 34.3 bits (77), Expect = 1.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNH 697 + +CPF+ KTG C+FG C H Sbjct: 173 RANCPFYSKTGACRFGDRCSRKH 195 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDH 1588 +D C +Y KTGAC+FG +C H Sbjct: 171 KDRANCPFYSKTGACRFGDRCSRKH 195 Score = 32.0 bits (71), Expect = 9.4 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Frame = +2 Query: 1130 MPIRPGEVD---CSFYIKTGSCRYGRACRFNH 1216 M IR E D C FY KTG+CR+G C H Sbjct: 164 MDIRVLEKDRANCPFYSKTGACRFGDRCSRKH 195
>Q15696:U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 2 - Homo sapiens (Human) Length = 482 Score = 35.8 bits (81), Expect = 0.65 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 1459 C FY KTG C+F +RC H S+P + K Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 203 Score = 34.3 bits (77), Expect = 1.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNH 697 + +CPF+ KTG C+FG C H Sbjct: 169 RANCPFYSKTGACRFGDRCSRKH 191 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDH 1588 +D C +Y KTGAC+FG +C H Sbjct: 167 KDRANCPFYSKTGACRFGDRCSRKH 191
>Q15695:U2AFL_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 - Homo sapiens (Human) Length = 479 Score = 35.8 bits (81), Expect = 0.65 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 1459 C FY KTG C+F +RC H S+P + K Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 208 Score = 34.3 bits (77), Expect = 1.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNH 697 + +CPF+ KTG C+FG C H Sbjct: 174 RANCPFYSKTGACRFGDRCSRKH 196 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 1514 EDAEACAYYMKTGACKFGVQCKFDH 1588 +D C +Y KTGAC+FG +C H Sbjct: 172 KDRANCPFYSKTGACRFGDRCSRKH 196
>Q9DFG8:MKRN2_DANRE Makorin-2 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 414 Score = 35.8 bits (81), Expect = 0.65 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Frame = +2 Query: 1385 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 1564 G C+ RC F H + S P +I C YY + GAC + Sbjct: 14 GVCREGSRCLFSHDLTTSKPSTI-------------------------CKYYQR-GACAY 47 Query: 1565 GVQCKFDH--PP 1594 G +C++DH PP Sbjct: 48 GDRCRYDHIKPP 59
>Q6P5D3:DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 - Mus musculus (Mouse)| Length = 1388 Score = 35.8 bits (81), Expect = 0.65 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = +2 Query: 578 KWKEGQKAEESYPERPGKPD-CPFFVKTGMCKFGSECKFNH 697 K+ + ++ E S R P+ C F++K G CKFGS+CKF H Sbjct: 284 KFCKSKQKESSKNVRDTSPETCKFYLK-GNCKFGSKCKFKH 323 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = +2 Query: 1508 RREDAEACAYYMKTGACKFGVQCKFDH--PP---LGEVIANVS 1621 R E C +Y+K G CKFG +CKF H PP +G NV+ Sbjct: 298 RDTSPETCKFYLK-GNCKFGSKCKFKHEVPPHQMIGRAERNVN 339 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 Query: 926 CPHYAKGKCKLGTNCKFSH 982 C Y KG CK G+ CKF H Sbjct: 305 CKFYLKGNCKFGSKCKFKH 323
>Q7SDY3:CWC24_NEUCR Pre-mRNA-splicing factor cwc-24 - Neurospora crassa| Length = 405 Score = 35.8 bits (81), Expect = 0.65 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPG 1447 VC YK+TGFC F + CKF H + A G Sbjct: 226 VCKDYKQTGFCGFGDNCKFLHAREDYAHG 254
>Q9UDW3:ZMAT5_HUMAN Zinc finger matrin-type protein 5 - Homo sapiens (Human)| Length = 170 Score = 35.4 bits (80), Expect = 0.85 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 617 ERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + K C F+ TG C FGS C+F+H ++D Sbjct: 50 DEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
>Q2TA39:ZMAT5_BOVIN Zinc finger matrin-type protein 5 - Bos taurus (Bovine)| Length = 170 Score = 35.4 bits (80), Expect = 0.85 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 617 ERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + K C F+ TG C FGS C+F+H ++D Sbjct: 50 DEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
>Q8N5P1:ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 - Homo sapiens (Human)| Length = 291 Score = 35.4 bits (80), Expect = 0.85 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%) Frame = +2 Query: 1343 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDA 1522 +R G+ +C ++ + C ++CKF H A+ E ++ V G+ R Sbjct: 190 ERKGKQICKYFLERK-CIKGDQCKFDHD---------AEIEKKKEMCKFYVQGYCTR--G 237 Query: 1523 EACAYYMKTGACKF---------GVQCKFDHPPL 1597 E C Y CKF G CKF H PL Sbjct: 238 ENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHAPL 271 Score = 32.3 bits (72), Expect = 7.2 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Frame = +2 Query: 467 QRPGEKECAFYMRTRTCKYEETCKFDHPQWVPK----------GGIPKWKEGQKAEESYP 616 +R G++ C +++ R C + CKFDH + K G + + YP Sbjct: 190 ERKGKQICKYFLE-RKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYP 248 Query: 617 ERPGKPDCPFFVKTGMCKFGSECKFNH 697 C F+ C G CKF+H Sbjct: 249 -------CKFYHTGTKCYQGEYCKFSH 268
>Q06102:YTH1_YEAST mRNA 3'-end-processing protein YTH1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 208 Score = 35.4 bits (80), Expect = 0.85 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEA-CAYY 1540 C F+ K G+C S C++ H +D ++ I K E+ + + PRR + C Y Sbjct: 95 CVFFSKNGYCTQSPDCQYLH-IDPAS--KIPKCENYEMGFCPLGSSCPRRHIKKVFCQRY 151 Query: 1541 MKTGACKFGV-QCKFDHP 1591 M TG C G +C +HP Sbjct: 152 M-TGFCPLGKDECDMEHP 168
>O17917:RN113_CAEEL Putative RING finger protein 113 homolog - Caenorhabditis elegans| Length = 384 Score = 35.4 bits (80), Expect = 0.85 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRS 1438 +C YK+TGFC F + CKF H DRS Sbjct: 180 ICKDYKETGFCTFGDSCKFVH--DRS 203
>Q9CQR5:ZMAT5_MOUSE Zinc finger matrin-type protein 5 - Mus musculus (Mouse)| Length = 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 617 ERPGKPDCPFFVKTGMCKFGSECKFNHPKKKD 712 + K C F+ TG C FGS C+F+H ++D Sbjct: 50 DEQNKRPCRKFLLTGQCDFGSNCRFSHMSEQD 81
>Q4IPA4:YTH1_GIBZE mRNA 3'-end-processing protein YTH1 - Gibberella zeae (Fusarium| graminearum) Length = 411 Score = 35.0 bits (79), Expect = 1.1 Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 3/172 (1%) Frame = +2 Query: 908 VKPFKP-CPHYAKGKCKLGTNCKFSHAKDMEA--PSSGXXXXXXXXXXXXXGHNGAVHDL 1078 + P +P C + G C GT C H D + P+ G G + Sbjct: 192 LSPDRPVCKAFQSGHCPNGTRCPERHVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEF 251 Query: 1079 VSXXXXXXXXLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKI 1258 + E N + MP +C+F+++ G C G C + H Sbjct: 252 LH---------EYNLRKMP------ECNFFMRNGYCSNGDECLYLH-------------- 282 Query: 1259 LNPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCK 1414 ++P ++ P + P+ P + +C FY GFC CK Sbjct: 283 IDPQSRLPPCPHYDMGFCPLGPN--CSKKHVRRKLCVFY-LAGFCPDGPDCK 331 Score = 35.0 bits (79), Expect = 1.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 905 PVKPFKPCPHYAKGKCKLGTNCKFSHAK 988 P PCPHY G C LG NC H + Sbjct: 285 PQSRLPPCPHYDMGFCPLGPNCSKKHVR 312
>P23949:TISD_MOUSE Butyrate response factor 2 - Mus musculus (Mouse)| Length = 367 Score = 35.0 bits (79), Expect = 1.1 Identities = 20/76 (26%), Positives = 33/76 (43%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C ++++G CK+ E+C+F H G R ++ P T E C + Sbjct: 131 LCRPFEESGTCKYGEKCQFAH-------GFHELRSLTRHPKYKT----------ELCRTF 173 Query: 1541 MKTGACKFGVQCKFDH 1588 G C +G +C F H Sbjct: 174 HTIGFCPYGPRCHFIH 189
>P47974:TISD_HUMAN Butyrate response factor 2 - Homo sapiens (Human)| Length = 494 Score = 35.0 bits (79), Expect = 1.1 Identities = 20/76 (26%), Positives = 33/76 (43%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C ++++G CK+ E+C+F H G R ++ P T E C + Sbjct: 158 LCRPFEESGTCKYGEKCQFAH-------GFHELRSLTRHPKYKT----------ELCRTF 200 Query: 1541 MKTGACKFGVQCKFDH 1588 G C +G +C F H Sbjct: 201 HTIGFCPYGPRCHFIH 216
>Q8IZP6:R113B_HUMAN RING finger protein 113B - Homo sapiens (Human)| Length = 322 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRS 1438 +C YK+TGFC F + CKF H DRS Sbjct: 195 ICKDYKETGFCGFGDSCKFLH--DRS 218
>O15541:R113A_HUMAN RING finger protein 113A - Homo sapiens (Human)| Length = 343 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRS 1438 +C YK+TGFC F + CKF H DRS Sbjct: 201 ICKDYKETGFCGFGDSCKFLH--DRS 224
>Q67ER4:R113A_BOVIN RING finger protein 113A - Bos taurus (Bovine)| Length = 343 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRS 1438 +C YK+TGFC F + CKF H DRS Sbjct: 201 ICKDYKETGFCGFGDSCKFLH--DRS 224
>Q8R205:ZC3HA_MOUSE Zinc finger CCCH domain-containing protein 10 - Mus musculus (Mouse)| Length = 435 Score = 34.7 bits (78), Expect = 1.4 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 10/135 (7%) Frame = +2 Query: 638 CPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQ 817 C F++ +CK G C++ HP + + S ++ + H N F+ + Sbjct: 42 CRDFLRN-VCKRGKRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECS-RPNCRFIHGSK 99 Query: 818 ESLLSGNST--LPVKPSEPC-------PVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNC 970 E T LP + + P L +G +P+ C + KG C+ G C Sbjct: 100 EDEDGYKKTGELPPRLRQKVAAGLGLSPADLPNGKEEVPI-----CRDFLKGDCQRGAKC 154 Query: 971 KFSH-AKDMEAPSSG 1012 KF H +D E + G Sbjct: 155 KFRHLQRDFEFDARG 169
>Q96K80:ZC3HA_HUMAN Zinc finger CCCH domain-containing protein 10 - Homo sapiens (Human)| Length = 434 Score = 34.7 bits (78), Expect = 1.4 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 10/135 (7%) Frame = +2 Query: 638 CPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSFVL*LQ 817 C F++ +CK G C++ HP + + S ++ + H N F+ + Sbjct: 42 CRDFLRN-VCKRGKRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECS-RPNCRFIHGSK 99 Query: 818 ESLLSGNST--LPVKPSEPC-------PVSLISGNSTLPVKPFKPCPHYAKGKCKLGTNC 970 E T LP + + P L +G +P+ C + KG C+ G C Sbjct: 100 EDEDGYKKTGELPPRLRQKVAAGLGLSPADLPNGKEEVPI-----CRDFLKGDCQRGAKC 154 Query: 971 KFSH-AKDMEAPSSG 1012 KF H +D E + G Sbjct: 155 KFRHLQRDFEFDARG 169
>Q6BTT1:YTH1_DEBHA mRNA 3'-end-processing protein YTH1 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 223 Score = 34.7 bits (78), Expect = 1.4 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Frame = +2 Query: 485 ECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPG-------KPDCP 643 EC FY + C C + H P+ IP +K P+ P K CP Sbjct: 98 ECLFYSKNGFCTQTPECLYLHVD--PQLKIPPCSSYEKG--FCPDGPKCANRHIRKIMCP 153 Query: 644 FFVKTGMCKFGSECKFNHPK 703 ++ TG C G+EC + HP+ Sbjct: 154 LWL-TGFCPKGAECDYTHPR 172
>Q6FTL0:YTH1_CANGA mRNA 3'-end-processing protein YTH1 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 209 Score = 34.7 bits (78), Expect = 1.4 Identities = 40/185 (21%), Positives = 56/185 (30%), Gaps = 5/185 (2%) Frame = +2 Query: 926 CPHYAKGKCKLGTNCKFSHAKDMEAPSSGXXXXXXXXXXXXXGHNGAVHDLVSXXXXXXX 1105 C H+ +G CK NC++ H Sbjct: 68 CKHWLRGLCKKNDNCEYLH----------------------------------------- 86 Query: 1106 XLEQNSKGMPIRPGEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLP 1285 E N + MP +C FY K G C C++ H ++P +K P Sbjct: 87 --EYNLRKMP------ECVFYAKNGFCTQSPECQYLH--------------IDPLSKVPP 124 Query: 1286 SFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSER-CKFHHPV----DRSAPGS 1450 D+ P + + +C Y GFC R C HP D S+P Sbjct: 125 CEDYEMGFCP--KGSACEKRHIKKVLCQRY-INGFCPLGRRECDMEHPFFYIPDLSSPLR 181 Query: 1451 IAKRE 1465 I K E Sbjct: 182 IKKDE 186
>Q9ERV1:MKRN2_MOUSE Makorin-2 - Mus musculus (Mouse)| Length = 416 Score = 34.7 bits (78), Expect = 1.4 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%) Frame = +2 Query: 1373 YKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTG 1552 Y G C+ +C F H + S P +I C YY K G Sbjct: 10 YFMHGVCREGSQCLFSHDLANSKPSTI-------------------------CKYYQK-G 43 Query: 1553 ACKFGVQCKFDH--PP 1594 C +G +C++DH PP Sbjct: 44 YCAYGARCRYDHTKPP 59 Score = 32.0 bits (71), Expect = 9.4 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 911 KPFKPCPHYAKGKCKLGTNCKFSHAK 988 KP C +Y KG C G C++ H K Sbjct: 32 KPSTICKYYQKGYCAYGARCRYDHTK 57
>Q9P6R8:CWC24_SCHPO Pre-mRNA-splicing factor cwc24 - Schizosaccharomyces pombe (Fission| yeast) Length = 533 Score = 34.7 bits (78), Expect = 1.4 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Frame = +2 Query: 488 CAFYMRTRTCKYEETCKFDHPQWVPKGG----------IPKWKEGQKAEESYPERPGKPD 637 C Y T C Y +TCKF H + K G K+K+G K EE + K D Sbjct: 190 CKDYKLTGYCGYGDTCKFLHMREDYKAGWQLDREWDSVQEKYKKGAKLEEGMVKNEKKED 249 Query: 638 CPF 646 PF Sbjct: 250 IPF 252
>P47977:CTH2_YEAST Zinc finger protein CTH2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 285 Score = 34.7 bits (78), Expect = 1.4 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Frame = +2 Query: 404 FYSPNTMAKRPRLESSLPIYPQRPGEKE-CAFYMRTRTCKYEETCKFDHPQWVPKGGIPK 580 F S + +P+++S + P++ + E C + +C Y C+F H G+ + Sbjct: 146 FSSEKESSAQPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAH-------GLGE 198 Query: 581 WKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGTVAGSG 736 K +K+ +++ +P C + K G C +G C F H D +G Sbjct: 199 LKV-KKSCKNFRTKP----CVNWEKLGYCPYGRRCCFKHGDDNDIAVYVKAG 245 Score = 32.3 bits (72), Expect = 7.2 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C+ + G C + +C+F H + G + ++S + + C + Sbjct: 174 LCESFTLKGSCPYGSKCQFAHGL-----GELKVKKSC------------KNFRTKPCVNW 216 Query: 1541 MKTGACKFGVQCKFDHPPLGEV-----------IANVSKQGDGKKVVG 1651 K G C +G +C F H ++ +++ SKQ D K+ G Sbjct: 217 EKLGYCPYGRRCCFKHGDDNDIAVYVKAGTYCNVSSTSKQSDEKRSNG 264
>Q6AXL8:ZMAT5_DANRE Zinc finger matrin-type protein 5 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 173 Score = 34.3 bits (77), Expect = 1.9 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 629 KPDCPFFVKTGMCKFGSECKFNHPKKK 709 K C FV+TG C FG+ C+F+H +K Sbjct: 54 KEVCRKFVQTGQCVFGTSCRFSHMSEK 80
>P47979:ZFS1_SCHPO Zinc finger protein zfs1 - Schizosaccharomyces pombe (Fission yeast)| Length = 404 Score = 34.3 bits (77), Expect = 1.9 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +2 Query: 1364 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 1543 C ++ +G C++ +C+F H G+ +E + P + +E C +M Sbjct: 332 CKNWQISGTCRYGSKCQFAH-------GNQELKEPPRHP----------KYKSERCRSFM 374 Query: 1544 KTGACKFGVQCKFDH 1588 G C +G++C F H Sbjct: 375 MYGYCPYGLRCCFLH 389
>P61129:ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 - Homo sapiens (Human)| Length = 1189 Score = 34.3 bits (77), Expect = 1.9 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%) Frame = +2 Query: 395 SDDFYSPNTMAKRPRLESSLPIYP---QRPGEKECAFYMRTRTCKYEETCKFDHPQWVPK 565 SDDF N K+ ++ + I + G++ C +++ R K ++ CKFDH + K Sbjct: 244 SDDFQEYNKPGKKWKVMTQEFINQHTVEHKGKQICKYFLEGRCIKGDQ-CKFDHDAELEK 302 Query: 566 GG-IPKW------KEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNH 697 I K+ +G+ + E P C F+ C G CKF+H Sbjct: 303 RKEICKFYLQGYCTKGENCIYMHNEFP----CKFYHSGAKCYQGDNCKFSH 349
>Q8CHP0:ZC3H3_MOUSE Zinc finger CCCH domain-containing protein 3 - Mus musculus (Mouse)| Length = 950 Score = 34.3 bits (77), Expect = 1.9 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 2/108 (1%) Frame = +2 Query: 1448 SIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQ 1627 S+A R + ++ A + + E C YY + G C G C + H P + + Sbjct: 641 SLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGECCPYIHDPEKVAVCTRFVR 700 Query: 1628 GDGKKVVGLSYVLEN*TRSSSPSPFRVC--FCHQSISNRMCIFGCLYV 1765 G KK G + ++ P VC F SN C + +YV Sbjct: 701 GTCKKTDGSCPFSHHVSKEKMP----VCSYFLKGICSNSNCPYSHVYV 744
>Q7SGR2:YTH1_NEUCR mRNA 3'-end-processing protein yth-1 - Neurospora crassa| Length = 317 Score = 34.3 bits (77), Expect = 1.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 905 PVKPFKPCPHYAKGKCKLGTNCKFSH 982 P+ PCPHY +G C LG C H Sbjct: 149 PLSRLPPCPHYERGFCPLGPRCDKKH 174 Score = 33.5 bits (75), Expect = 3.2 Identities = 21/74 (28%), Positives = 29/74 (39%) Frame = +2 Query: 476 GEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQKAEESYPERPGKPDCPFFVK 655 G C ++R CK E+C+F H + K P+C FFV+ Sbjct: 95 GSLVCKHWLRG-LCKKGESCEFLHEYNLRK---------------------MPECNFFVR 132 Query: 656 TGMCKFGSECKFNH 697 G C G EC + H Sbjct: 133 NGYCSNGDECLYLH 146
>Q6P158:DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 - Homo sapiens (Human)| Length = 1386 Score = 34.3 bits (77), Expect = 1.9 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 1523 EACAYYMKTGACKFGVQCKFDHP-PLGEVIANVSKQGD 1633 E C +Y+K G CKFG +C+F H P +++ + + D Sbjct: 303 EICKFYLK-GNCKFGSKCRFKHEVPPNQIVGRIERSVD 339 Score = 33.9 bits (76), Expect = 2.5 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Frame = +2 Query: 638 CPFFVKTGMCKFGSECKFNH--PKKKDDGTVAGSGDKVSYFHLLTRAIIILNINVSF 802 C F++K G CKFGS+C+F H P + G + S D S+ + + A + + + F Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVPPNQIVGRIERSVDD-SHLNAIEDASFLYELEIRF 359 Score = 32.0 bits (71), Expect = 9.4 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 1157 CSFYIKTGSCRYGRACRFNHPERHNE 1234 C FY+K G+C++G CRF H N+ Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVPPNQ 329
>Q4P400:CWC24_USTMA Pre-mRNA-splicing factor CWC24 - Ustilago maydis (Smut fungus)| Length = 355 Score = 34.3 bits (77), Expect = 1.9 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRS 1438 VC YK+TG+C F + CKF H DRS Sbjct: 202 VCKDYKETGYCGFGDTCKFLH--DRS 225
>Q5AVC5:CWC24_EMENI Pre-mRNA-splicing factor cwc24 - Emericella nidulans (Aspergillus| nidulans) Length = 332 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +2 Query: 1262 NPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHH 1423 NP A P+ F P +T+ + VC YK TG+C F + CKF H Sbjct: 138 NPNA---PAKTFGPIKAPTNVRTVTFMDYAPD-VCKDYKLTGYCGFGDSCKFSH 187
>Q9JJ48:ZC3H8_MOUSE Zinc finger CCCH domain-containing protein 8 - Mus musculus (Mouse)| Length = 305 Score = 33.9 bits (76), Expect = 2.5 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Frame = +2 Query: 428 KRPRLESSLPIYPQ----RPGEKECAFYMRTRTCKYEETCKFDHPQWVPK---------- 565 K+PR+ S Q R G++ C +++ R C + CKFDH + K Sbjct: 187 KQPRVRMSQGFINQHTVERKGKQVCKYFLE-RKCIKGDQCKFDHDAEIEKKKEMCKYYVQ 245 Query: 566 GGIPKWKEGQKAEESYPERPGKPDCPFFVKTGMCKFGSECKFNH 697 G K + YP C F+ C G C F+H Sbjct: 246 GYCTKGENCLYLHSEYP-------CKFYHTGTKCYQGDHCNFSH 282 Score = 32.3 bits (72), Expect = 7.2 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 9/94 (9%) Frame = +2 Query: 1343 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDA 1522 +R G+ VC ++ + C ++CKF H A+ E ++ V G+ + Sbjct: 204 ERKGKQVCKYFLERK-CIKGDQCKFDHD---------AEIEKKKEMCKYYVQGYCTK--G 251 Query: 1523 EACAYYMKTGACKF---------GVQCKFDHPPL 1597 E C Y CKF G C F H PL Sbjct: 252 ENCLYLHSEYPCKFYHTGTKCYQGDHCNFSHAPL 285
>Q5T200:ZC313_HUMAN Zinc finger CCCH domain-containing protein 13 - Homo sapiens (Human)| Length = 1668 Score = 33.9 bits (76), Expect = 2.5 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRACRFNH 1216 E C ++KTG+C YG CRF H Sbjct: 39 ETQCRNWLKTGNCLYGNTCRFVH 61 Score = 32.3 bits (72), Expect = 7.2 Identities = 19/70 (27%), Positives = 30/70 (42%) Frame = +2 Query: 416 NTMAKRPRLESSLPIYPQRPGEKECAFYMRTRTCKYEETCKFDHPQWVPKGGIPKWKEGQ 595 ++ ++RP + L E +C +++T C Y TC+F H G P+ K Sbjct: 18 DSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFVH------GPSPRGKGYS 71 Query: 596 KAEESYPERP 625 PERP Sbjct: 72 SNYRRSPERP 81
>Q9DD48:MKRN2_SERQU Makorin-2 - Seriola quinqueradiata (Five-ray yellowtail)| Length = 423 Score = 33.9 bits (76), Expect = 2.5 Identities = 17/68 (25%), Positives = 27/68 (39%) Frame = +2 Query: 1385 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 1564 G C+ RC F H ++ S P +I C +Y + G C + Sbjct: 14 GVCREGSRCLFSHDLNNSKPSTI-------------------------CKFYQR-GVCAY 47 Query: 1565 GVQCKFDH 1588 G +C++DH Sbjct: 48 GERCRYDH 55
>Q94535:U2AF1_DROME Splicing factor U2af 38 kDa subunit - Drosophila melanogaster (Fruit| fly) Length = 264 Score = 33.5 bits (75), Expect = 3.2 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNP 1267 +V+CSFY K G+CR+G C R ++ ++ ++ +NP Sbjct: 15 KVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNP 55
>P17431:TISB_RAT Butyrate response factor 1 - Rattus norvegicus (Rat)| Length = 338 Score = 33.5 bits (75), Expect = 3.2 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C +++ G CK+ ++C+F H G R ++ P T E C + Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161 Query: 1541 MKTGACKFGVQCKFDH 1588 G C +G +C F H Sbjct: 162 HTIGFCPYGPRCHFIH 177
>P23950:TISB_MOUSE Butyrate response factor 1 - Mus musculus (Mouse)| Length = 338 Score = 33.5 bits (75), Expect = 3.2 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C +++ G CK+ ++C+F H G R ++ P T E C + Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161 Query: 1541 MKTGACKFGVQCKFDH 1588 G C +G +C F H Sbjct: 162 HTIGFCPYGPRCHFIH 177
>Q07352:TISB_HUMAN Butyrate response factor 1 - Homo sapiens (Human)| Length = 338 Score = 33.5 bits (75), Expect = 3.2 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 1540 +C +++ G CK+ ++C+F H G R ++ P T E C + Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161 Query: 1541 MKTGACKFGVQCKFDH 1588 G C +G +C F H Sbjct: 162 HTIGFCPYGPRCHFIH 177
>Q5KND3:SLT11_CRYNE Pre-mRNA-splicing factor SLT11 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 326 Score = 33.5 bits (75), Expect = 3.2 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 605 ESYPERPGKPDCPFFVKTGMCKFGSECKFNHPKKKDDGT 721 + Y +R C FFVK G CK G+EC F H K++ T Sbjct: 150 DPYYKRNRPHICSFFVK-GECKRGAECPFRHEMPKENET 187
>Q02799:LEE1_YEAST Zinc finger protein LEE1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 301 Score = 33.5 bits (75), Expect = 3.2 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +2 Query: 881 LISGNSTLPVKPFK--PCPHYAKGKCKLGTNCKFSHAKDM 994 LI+ N++ K + PC + G C+ G++C FSH+ D+ Sbjct: 76 LITKNNSQQQKDYSHVPCKFFKMGNCQAGSSCPFSHSPDI 115
>Q5KB05:CWC24_CRYNE Pre-mRNA-splicing factor CWC24 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 329 Score = 33.5 bits (75), Expect = 3.2 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHH 1423 VC YK+TGFC + + CKF H Sbjct: 182 VCKDYKETGFCGYGDSCKFLH 202
>Q9QXP6:MKRN1_MOUSE Makorin-1 - Mus musculus (Mouse)| Length = 481 Score = 33.1 bits (74), Expect = 4.2 Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 8/149 (5%) Frame = +2 Query: 1166 YIKTGSCRYGRACRFNH--PERHNE--ASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 1333 Y + G C YG CR+ H P + E A+ + K A+ L S A + Sbjct: 92 YFQRGYCVYGDRCRYEHSKPLKQEEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAES 151 Query: 1334 TYPQRP--GETVCDFYKKTGFCKFSERCKFHHPVDRSAP--GSIAKRESSQQPVMLTVAG 1501 P P G D+ F C P P GS+ K ES ++P + Sbjct: 152 RNPSFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTV---- 207 Query: 1502 FPRREDAEACAYYMKTGACKFGVQCKFDH 1588 E + Y G C++G C + H Sbjct: 208 ----ETKKQLCPYAAVGECRYGENCVYLH 232
>Q96B70:LENG9_HUMAN Leukocyte receptor cluster member 9 - Homo sapiens (Human)| Length = 479 Score = 33.1 bits (74), Expect = 4.2 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Frame = +2 Query: 1301 AAHVPIEPE--PITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRES-S 1471 AA P P+ P T P P C F+ + G C+F RC+ HP + PG A+ E+ + Sbjct: 3 AAREPELPQEAPATEPAPP--PACRFFLE-GRCRFGARCRQPHPGAPAPPGREAQPEAGA 59 Query: 1472 QQPVMLTVAGFPRR 1513 ++P + T A +R Sbjct: 60 KKPPLRTAADVIQR 73
>P53769:CWC24_YEAST Pre-mRNA-splicing factor CWC24 - Saccharomyces cerevisiae (Baker's| yeast) Length = 259 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVD 1432 VC YK+TG+C + + CKF H D Sbjct: 143 VCKDYKQTGYCGYGDSCKFLHSRD 166
>Q752S4:CWC24_ASHGO Pre-mRNA-splicing factor CWC24 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 250 Score = 33.1 bits (74), Expect = 4.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVD 1432 VC Y++TGFC + + CKF H D Sbjct: 106 VCKDYRQTGFCGYGDSCKFLHSRD 129
>Q29350:U2AF1_PIG Splicing factor U2AF 35 kDa subunit - Sus scrofa (Pig)| Length = 82 Score = 32.7 bits (73), Expect = 5.5 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 1148 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNP 1267 +V+CSFY K G+CR+G C R ++ ++ V+ NP Sbjct: 15 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>Q5ZMJ9:SRRM1_CHICK Serine/arginine repetitive matrix protein 1 - Gallus gallus| (Chicken) Length = 888 Score = 32.7 bits (73), Expect = 5.5 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = -2 Query: 254 APR*GRSHRKSTSPPHRRLHRRGRMGKKGSPTSPPHRR----LRHRGRMGKKGSPTSPPE 87 +P R R + PP R R + ++ SP+ PP RR R+ + ++ SP+ PP+ Sbjct: 545 SPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 604 Query: 86 YECA 75 A Sbjct: 605 RRTA 608
>Q6MG07:PRR3_RAT Proline-rich protein 3 - Rattus norvegicus (Rat)| Length = 186 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +2 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 P + P + VC + K G C++ + C F+HP Sbjct: 142 PPKDSPPMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 179
>Q7YR36:PRR3_PANTR Proline-rich protein 3 - Pan troglodytes (Chimpanzee)| Length = 188 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = +2 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 P + +P + VC + K G C++ + C F+HP Sbjct: 144 PPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHP 181
>Q811B5:PRR3_MOUSE Proline-rich protein 3 - Mus musculus (Mouse)| Length = 190 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +2 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 P + P + VC + K G C++ + C F+HP Sbjct: 146 PPKDSPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 183
>P79522:PRR3_HUMAN Proline-rich protein 3 - Homo sapiens (Human)| Length = 188 Score = 32.7 bits (73), Expect = 5.5 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = +2 Query: 1313 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 1426 P + +P + VC + K G C++ + C F+HP Sbjct: 144 PPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHP 181
>Q6CB23:CWC24_YARLI Pre-mRNA-splicing factor CWC24 - Yarrowia lipolytica (Candida| lipolytica) Length = 256 Score = 32.7 bits (73), Expect = 5.5 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRE 1465 VC YK TGFC + + CKF H + G +RE Sbjct: 136 VCKDYKLTGFCGYGDSCKFLHMREDYKAGWQIERE 170
>Q6CSS6:CWC24_KLULA Pre-mRNA-splicing factor CWC24 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 229 Score = 32.7 bits (73), Expect = 5.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHHPVDRSAPG 1447 +C ++KTG+C + + CKF H D A G Sbjct: 115 ICKDFQKTGYCGYGDSCKFLHSRDDVAGG 143
>Q4WUA0:CWC24_ASPFU Pre-mRNA-splicing factor cwc24 - Aspergillus fumigatus (Sartorya| fumigata) Length = 339 Score = 32.7 bits (73), Expect = 5.5 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 1361 VCDFYKKTGFCKFSERCKFHH 1423 VC +K+TGFC F + CKF H Sbjct: 175 VCKDWKQTGFCGFGDSCKFLH 195
>Q9XUB2:MEX5_CAEEL Zinc finger protein mex-5 - Caenorhabditis elegans| Length = 468 Score = 32.3 bits (72), Expect = 7.2 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +2 Query: 1328 PITYPQRPGET-VCDFYKK--TGFCKFSERCKFHHPVDR 1435 P YP +T +C + + TGFC + RC+F HP D+ Sbjct: 307 PARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHPTDK 345
>Q05519:SFR11_HUMAN Splicing factor arginine/serine-rich 11 - Homo sapiens (Human)| Length = 484 Score = 32.0 bits (71), Expect = 9.4 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 17/79 (21%) Frame = -2 Query: 233 HRKSTSPPHRRLHRRGRMGKKGSPTSPPHRR--LRHRGRMG---------------KKGS 105 HR+S S RR H + R ++ SP RR R RGR KK S Sbjct: 266 HRRSRSRSRRRSHSKSRSRRRSK--SPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRS 323 Query: 104 PTSPPEYECARVSRARGVE 48 T P Y AR SR+ E Sbjct: 324 KTPPKSYSTARRSRSASRE 342
>Q28BT8:DUS3L_XENTR tRNA-dihydrouridine synthase 3-like - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 639 Score = 32.0 bits (71), Expect = 9.4 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Frame = +2 Query: 1391 CKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKT-GACKFG 1567 C F ++CKF H V + S++P ED Y +T G C +G Sbjct: 139 CFFGDKCKFLHDVAKYV---------SEKP-----------EDIRPNCYLYETFGKCIYG 178 Query: 1568 VQCKFDHPPLGEVIAN-----VSKQGDGKKVV 1648 V C+F LG+ N + KQ +G+ +V Sbjct: 179 VTCRFAKSHLGDNFKNLINEELMKQWEGQVLV 210 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 335,156,815 Number of extensions: 7574738 Number of successful extensions: 21676 Number of sequences better than 10.0: 104 Number of HSP's gapped: 21275 Number of HSP's successfully gapped: 348 Length of query: 640 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 520 Effective length of database: 67,771,039 Effective search space: 35240940280 Effective search space used: 35240940280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
