ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf119b13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|BX571841.6| Zebrafish DNA sequence from clone DKEY-52H13 in ... 48 0.048
2emb|CT737342.10| Pig DNA sequence from clone CH242-172F13 on chr... 42 3.0
3emb|AL732390.10| Mouse DNA sequence from clone RP23-413O19 on ch... 42 3.0

>emb|BX571841.6| Zebrafish DNA sequence from clone DKEY-52H13 in linkage group 18,
             complete sequence
          Length = 105977
 Score = 48.1 bits (24), Expect = 0.048
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 63    atggaattgatcctgattttggta 86
             ||||||||||||||||||||||||
Sbjct: 95635 atggaattgatcctgattttggta 95612



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>emb|CT737342.10| Pig DNA sequence from clone CH242-172F13 on chromosome 7, complete
              sequence
          Length = 193591

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 186    ccaacagagaatcaagtcaca 206
              |||||||||||||||||||||
Sbjct: 184711 ccaacagagaatcaagtcaca 184731



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>emb|AL732390.10| Mouse DNA sequence from clone RP23-413O19 on chromosome 11 Contains a
              laminin receptor 1 (ribosomal protein SA) (Lamr1)
              pseudogene, a novel gene, the 3' end of the Fgf18 gene for
              fibroblast growth factor 18 and a CpG island, complete
              sequence
          Length = 195612

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 665    ggtggtgtgtgtgaccgtggg 685
              |||||||||||||||||||||
Sbjct: 161456 ggtggtgtgtgtgaccgtggg 161436


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 144,593,792
Number of extensions: 7088201
Number of successful extensions: 164640
Number of sequences better than 10.0: 3
Number of HSP's gapped: 164640
Number of HSP's successfully gapped: 3
Length of query: 792
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 770
Effective length of database: 18,508,616,841
Effective search space: 14251634967570
Effective search space used: 14251634967570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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