ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128o24 |
|---|---|
| Clone Library Name | barley_pub |
>AK106923: | Length = 252 Score = 39.7 bits (91), Expect = 0.003 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 1/98 (1%) Frame = -3 Query: 393 QQRTGGLGIEALTVVAARHHGTCRDAWAQ-EPLPPTKPPSASLPSIETQGRRTSHEIAAD 217 Q R G +H G + W + P PP+ PP P + A Sbjct: 58 QLRASSSGCSGTNAATTKHAGAAKPPWLRPTPPPPSTPPQHGRPGSSPNAAQARRRRPAS 117 Query: 216 LEPYAYLLAMEKGRNNQQPKTTCGHTLPPLSLRPATPT 103 +P+ R +Q C LPP S RPA P+ Sbjct: 118 RQPH---------RQPRQLLGRCHQPLPPASHRPAAPS 146
>AK099051:Os02g0252100 | Length = 265 Score = 32.0 bits (71), Expect = 0.67 Identities = 20/72 (27%), Positives = 28/72 (38%) Frame = -2 Query: 736 DHLGHPGRHHFSSSWR*NRWTPQHRGREE*HEQRPVKTSRHHSKRSPFSHRIHRRGRSMQ 557 DH G H+ S R +P++RGR P R SP HR + Sbjct: 134 DHEGRRSSHYGRSRSRSRSRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRR 193 Query: 556 QKKAPQLDHRLR 521 Q K ++D + R Sbjct: 194 QPKEHEVDKKRR 205
>AK062577:Os02g0252100 | Length = 265 Score = 32.0 bits (71), Expect = 0.67 Identities = 20/72 (27%), Positives = 28/72 (38%) Frame = -2 Query: 736 DHLGHPGRHHFSSSWR*NRWTPQHRGREE*HEQRPVKTSRHHSKRSPFSHRIHRRGRSMQ 557 DH G H+ S R +P++RGR P R SP HR + Sbjct: 134 DHEGRRSSHYGRSRSRSRSRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRR 193 Query: 556 QKKAPQLDHRLR 521 Q K ++D + R Sbjct: 194 QPKEHEVDKKRR 205
>Os10g0198300:Os10g0198300 | Length = 420 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 Query: 308 CAHASLQVPWCRAATTVSASIPKPPVLCCRSPNLEEDP 421 CA A+LQ +C + S P PP+LC P+ P Sbjct: 52 CAKANLQTAFCCVYKLMKQSNPYPPILCSLIPSRAPPP 89
>Os03g0167100:Os03g0167100 | Length = 106 Score = 31.2 bits (69), Expect = 1.1 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -3 Query: 330 TCRDAWAQE----PLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQ 163 TCRD AQ P PP PP +S + GRR E + D + ++ GR + Sbjct: 5 TCRDTKAQRFLLLPTPPPPPPPSSCALV---GRRPREETSMDTQVKLAVVVKVMGRTGSR 61 Query: 162 PKTT 151 + T Sbjct: 62 GQVT 65
>L24390:Os09g0402100 | Length = 213 Score = 31.2 bits (69), Expect = 1.1 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Frame = -3 Query: 312 AQEPLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQ-PKTTCGHTL 136 A P P +PP P E + TS A P +K + Q+ P Sbjct: 126 ASSPRPRGRPPKPKDPLAEAVAKATSGMPRARGRP------PKKAKVEQEDPIGAPAAAS 179 Query: 135 PPLSLRPATPTVERGEGRPQSKRP 64 P + A P V+RG GRP RP Sbjct: 180 APAAAAEAAPPVKRGRGRPPKVRP 203
>AK068506:Os09g0402100 | Length = 213 Score = 31.2 bits (69), Expect = 1.1 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Frame = -3 Query: 312 AQEPLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQ-PKTTCGHTL 136 A P P +PP P E + TS A P +K + Q+ P Sbjct: 126 ASSPRPRGRPPKPKDPLAEAVAKATSGMPRARGRP------PKKAKVEQEDPIGAPAAAS 179 Query: 135 PPLSLRPATPTVERGEGRPQSKRP 64 P + A P V+RG GRP RP Sbjct: 180 APAAAAEAAPPVKRGRGRPPKVRP 203
>Os10g0151700:Os10g0151700 | Length = 848 Score = 30.8 bits (68), Expect = 1.5 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Frame = -3 Query: 360 LTVVAARHHGTCRDAWAQEPLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEK 181 LT +AA+ R EPL P P +SLP TQ + ++ E + + A LA+++ Sbjct: 15 LTSMAAQISDLARKMSVLEPLVPLAPKLSSLPDRVTQVQASAFEYSEQVR--ALNLAVQR 72 Query: 180 ----GRNNQQPKTTCGHTLPPLSLRPATPTVERGEG 85 R++ P+T+ T P P T ++ G Sbjct: 73 VEASHRSSPVPETSGSATHAPRGAPPPTGDNDKQSG 108
>AK108664:Os12g0605300 | Length = 407 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -3 Query: 303 PLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQPK 157 P PP PP A P++ S E A + P A +E N+++ K Sbjct: 42 PPPPPPPPPAPAPALLAPAENASAEAAFAVPPAAIAAVVEANGNSEKKK 90
>AK071003:Os02g0751900 | Length = 566 Score = 29.6 bits (65), Expect = 3.3 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Frame = -2 Query: 493 GPQAPLPIFLESTTTVAFMEEEEKRIFLQVWGPAAKNRGFGDRSADSRSSTTPWNL--QG 320 GP A + S ++ IFL VW + G DS L +G Sbjct: 285 GPDAGGELARSSVNYCLIASKQMVGIFLSVWVRRELVQYIGHLRVDSVGRGIMGRLGNKG 344 Query: 319 CMGTGATTTHETSFCLVALNRDSGEK 242 C+ + T H+TS C V + SGEK Sbjct: 345 CIAM-SMTLHQTSVCFVCSHLASGEK 369
>AK110223:Os01g0329300 | Length = 759 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 281 GGFVGGSGSCAHASLQVPWCRAATTVSASIPKPPVLC 391 GG G G+ A A L P+C A V ++ +PPV C Sbjct: 707 GGGDEGGGASAGAKLADPYCWNAYGVMETLTQPPVHC 743
>Os08g0428800:Os08g0428800 | Length = 471 Score = 28.9 bits (63), Expect = 5.6 Identities = 23/85 (27%), Positives = 36/85 (42%) Frame = -3 Query: 333 GTCRDAWAQEPLPPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQPKT 154 G R ++P P PP S P +GR + +P + + +GR ++ KT Sbjct: 90 GRGRPPKPRDPNAPPPPPKPSSP--RPRGRPPKSK-----DPISDAIPKSRGRPPKKAKT 142 Query: 153 TCGHTLPPLSLRPATPTVERGEGRP 79 PP + + V+RG GRP Sbjct: 143 A---PAPPPAAGDGSAPVKRGRGRP 164
>AK109614:Os06g0324000 | Length = 229 Score = 28.9 bits (63), Expect = 5.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 138 LPPLSLRPATPTVERGEGRPQSKR 67 LPPL RP TP + EGR Q +R Sbjct: 110 LPPLRRRPPTPPLGAAEGRIQPRR 133
>Os05g0198200:Os05g0198200 | Length = 138 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +2 Query: 680 SVLSPTGGEVVATRVSQVV-*SPATAGAYRSCCCC 781 ++ P GGE A R+ ++V SP A R CC C Sbjct: 31 TLFDPPGGEQPAERIGRLVRESPVVIFARRGCCMC 65
>Os02g0594300:Os02g0594300 | Length = 345 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = -2 Query: 337 PWNLQGCMGTGATTTHETSFCLVALNRDSGEKNIT*DSSRSGAICIF-TGHGEGKKQPTT 161 PW G A +H+ + L+ N+ SS G + + GHG G + Sbjct: 132 PWVNIPPQGAAAAASHQQPLNTLLLH------NLLMSSSPHGCLLLHHAGHGHGHAHSHS 185 Query: 160 *NYMRAHPPSSLTP 119 ++ RAH PS+ P Sbjct: 186 HSHSRAHNPSTRPP 199
>AK102526:Os11g0132600 | Length = 657 Score = 28.5 bits (62), Expect = 7.4 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 11/146 (7%) Frame = -2 Query: 406 VWGPAAKNRGFGDRSADSRSSTTPWNLQGCMGTGATTTHETSFC----LVALNRDSGEKN 239 +W NRGF + S+ PW++ G + TT + S C +VAL + Sbjct: 68 IWAELVSNRGFEAGGPHTPSNIDPWSIIGDESSIYVTT-DCSSCFRQNIVALRME----- 121 Query: 238 IT*DSSRSGAICIFT------GHGEGKKQPTT*NYMRAHPPSSLTPAGN-ADGGERRGEA 80 I D+ +G + I+ EGK Y+R+ LT + +DG + Sbjct: 122 ILCDNCPAGGVGIYNPGFWGMNIEEGKAYNLV-MYIRSLESVELTASLTCSDGMQNLASV 180 Query: 79 AVQKTDRRLQVRTKIREQLSMRGEVR 2 ++Q D L TKI QL G R Sbjct: 181 SIQGID--LSNWTKIELQLLAEGTCR 204
>AK071801:Os04g0223500 | Length = 521 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 349 SSTTPWNLQGCMGTGATTTHETSFCLVALNRDSGEKNI 236 S + W L+ G G TH+ F ++ + R SG NI Sbjct: 130 SGSGEWRLEVVDGEGHIETHKADFVILCIGRFSGVPNI 167
>AK066065:Os05g0489000 | Length = 552 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 325 QGCMGTGATTTHETSFCLVALNRDSGEK 242 +GC+ + T H+TSFC + + SGEK Sbjct: 323 KGCISV-SMTVHQTSFCFICSHLASGEK 349
>AK110501: | Length = 799 Score = 28.1 bits (61), Expect = 9.6 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -2 Query: 145 AHPPSSLTPA-GNADGGERRGEAAVQKTDRRLQVRTKIREQLSMR 14 A P + PA NA+ G G A V + +RR + ++RE+ R Sbjct: 398 AQVPGAAAPAPANANAGSASGSAMVTEIERRTREAARLREEAVAR 442
>AK110381: | Length = 950 Score = 28.1 bits (61), Expect = 9.6 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +2 Query: 278 EGGFVGGSGSCAHASLQVPWCRAATTVSASIPKPPVLCCRSPN 406 E V G G C A P CRA SA + + C++P+ Sbjct: 706 ESYMVQGGGCCGRACQCCPGCRAVECCSAPSKQQMLFWCQTPS 748
>AK063356: | Length = 358 Score = 28.1 bits (61), Expect = 9.6 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 622 WSS-PVSARVIPPGLDAEESICSISNWRRSGGDPGVPSGLVPGDG 753 WS+ P + R +P S+C ++NW RS G PG G Sbjct: 14 WSTCPPAHRTVP----CSSSVCKVANWYRSPASCPYSDGGRPGSG 54
>AK121220:Os05g0314100 | Length = 140 Score = 28.1 bits (61), Expect = 9.6 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Frame = -3 Query: 309 QEPLPPTKPPSASLPSI-----ETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQPKTTC 148 Q PLPP P+A PS+ TQG++ E + P + L+ K NN Q C Sbjct: 18 QRPLPPPGSPAARPPSLPMAEEATQGKKEEEEFSTG--PLSVLMMSVK--NNTQVLINC 72
>AK105812:Os03g0736400 | Length = 311 Score = 28.1 bits (61), Expect = 9.6 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 477 FPSSLNPPPRWLXXXXXXXXXXXKFGDLQQRTGGLGIEALTVVAARHHGTCRDAW-AQEP 301 FP+SL P RWL DL TG +GIEA++ + H D W E Sbjct: 152 FPASLRPG-RWL--------------DLYSGTGSVGIEAMSRGCSEAHFVEMDPWVVSEV 196 Query: 300 LPP 292 L P Sbjct: 197 LKP 199
>AK102856:Os02g0130900 | Length = 108 Score = 28.1 bits (61), Expect = 9.6 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 4/83 (4%) Frame = -3 Query: 297 PPTKPPSASLPSIETQGRRTSHEIAADLEPYAYLLAMEKGRNNQQPKTT----CGHTLPP 130 PP +PP+ S P+ + R +S + + NQ P + C T PP Sbjct: 16 PPPRPPTTSAPTSASTTRSSS--------------SPSRSPGNQSPSGSPSRGCSSTPPP 61 Query: 129 LSLRPATPTVERGEGRPQSKRPT 61 L T+ R R S T Sbjct: 62 LPSAATRGTMSRSASRSSSPSTT 84
>AK073888:Os08g0136700 | Length = 274 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +1 Query: 742 PGDGRCVSELLLLFGPNCNSRSWVRV-LSACSRELDVI-FYFSLGFAVRCCV 891 P RC+SE++ F CNS ++ S+C ++ FYF L R + Sbjct: 212 PACARCLSEIVSKFDKTCNSAQGCQIDYSSCWARYEIYPFYFPLEAGSRATI 263
>AK072608:Os08g0320200 | Length = 569 Score = 28.1 bits (61), Expect = 9.6 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Frame = -2 Query: 751 RRRGLDHLGHPGRHHFSSSWR*NRWTPQHRGREE*HE-QRPVKTSRHHSKRSPFSHRIHR 575 RRR L H HP H + PQ R H+ Q P++ H R P H + R Sbjct: 150 RRRPLRHRPHPRPGHLHAQ-------PQGVRRLRPHQPQHPLRHQLRHRLRGPHVHALPR 202 Query: 574 R 572 R Sbjct: 203 R 203
>AK069117:Os03g0736400 | Length = 311 Score = 28.1 bits (61), Expect = 9.6 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 477 FPSSLNPPPRWLXXXXXXXXXXXKFGDLQQRTGGLGIEALTVVAARHHGTCRDAW-AQEP 301 FP+SL P RWL DL TG +GIEA++ + H D W E Sbjct: 152 FPASLRPG-RWL--------------DLYSGTGSVGIEAMSRGCSEAHFVEMDPWVVSEV 196 Query: 300 LPP 292 L P Sbjct: 197 LKP 199
>AK066896:Os03g0270200 | Length = 840 Score = 28.1 bits (61), Expect = 9.6 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Frame = -2 Query: 715 RHHFSSSWR*NRWTPQHRGREE*HEQRPVKTSRHHSKRSPFSHR---IHRRGRSMQQKKA 545 R FS R R TP R + +R RH RSP HR I R+ ++++ Sbjct: 245 RRSFSPRKRSPRSTPSMSRRRSPYSRRSPSVPRH---RSPSPHRRSHIRRKSPPFVRQRS 301 Query: 544 PQLDHRLRCR*TTSLQMGPQAPLP 473 P HR S P++P P Sbjct: 302 PSPHHR------RSPGRAPRSPSP 319
>AK066597:Os01g0855200 | Length = 512 Score = 28.1 bits (61), Expect = 9.6 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 312 AQEPLPPTKPPSASLPSIETQGRRTSH 232 A LPP +PP+A++ ++TQ SH Sbjct: 241 AAATLPPPQPPAATVAMVDTQHAEQSH 267
>AK065375:Os01g0612700 | Length = 855 Score = 28.1 bits (61), Expect = 9.6 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Frame = -3 Query: 327 CRDAWAQEPLPPTKPPSASLPSIETQGR----RTSHEIAADLEPYAYLLAMEKGRNNQQP 160 C+ +W PLPP P S+PS+ E A + P + L +EK + Q Sbjct: 172 CKVSWL--PLPPPTPLGESMPSLPVAAAPKVLLVMPEEAVESVPSSEALDVEKPASITQA 229 Query: 159 KTTCGHTLPP 130 + + +T PP Sbjct: 230 EPSSPNTPPP 239
>AF097724:Os08g0136700 | Length = 274 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +1 Query: 742 PGDGRCVSELLLLFGPNCNSRSWVRV-LSACSRELDVI-FYFSLGFAVRCCV 891 P RC+SE++ F CNS ++ S+C ++ FYF L R + Sbjct: 212 PACARCLSEIVSKFDKTCNSAQGCQIDYSSCWARYEIYPFYFPLEAGSRATI 263
>AF093570:Os08g0136700 | Length = 274 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +1 Query: 742 PGDGRCVSELLLLFGPNCNSRSWVRV-LSACSRELDVI-FYFSLGFAVRCCV 891 P RC+SE++ F CNS ++ S+C ++ FYF L R + Sbjct: 212 PACARCLSEIVSKFDKTCNSAQGCQIDYSSCWARYEIYPFYFPLEAGSRATI 263
>AF090872:Os08g0136700 | Length = 274 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +1 Query: 742 PGDGRCVSELLLLFGPNCNSRSWVRV-LSACSRELDVI-FYFSLGFAVRCCV 891 P RC+SE++ F CNS ++ S+C ++ FYF L R + Sbjct: 212 PACARCLSEIVSKFDKTCNSAQGCQIDYSSCWARYEIYPFYFPLEAGSRATI 263 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,604,913 Number of extensions: 925289 Number of successful extensions: 3615 Number of sequences better than 10.0: 33 Number of HSP's gapped: 3603 Number of HSP's successfully gapped: 33 Length of query: 321 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 220 Effective length of database: 11,355,714 Effective search space: 2498257080 Effective search space used: 2498257080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
