ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf126i01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0639900:Os07g0639900 358 4e-99
2AK069168:Os11g0220700 33 0.38
3Os07g0599400:Os07g0599400 32 1.1
4AK106729:Os08g0326000 31 1.5
5Os08g0135600:Os08g0135600 31 1.9
6Os06g0249500:Os06g0249500 30 4.2
7AK109061:Os05g0165500 30 4.2
8AK106406:Os12g0605100 29 7.2
9AK102886:Os02g0288200 29 7.2
10AK069116:Os04g0488500 29 7.2
11AK067112:Os05g0144000 29 7.2
12Os12g0569900:Os12g0569900 28 9.4

>Os07g0639900:Os07g0639900 |
          Length = 253
 Score =  358 bits (919), Expect = 4e-99
 Identities = 178/229 (77%), Positives = 191/229 (83%)
 Frame = +2

Query: 197 GLGLLPQRRTAFQGARMDNXXXXXXXXALIVLEGLDRSGKSSQCARLLSFLQGKGCATEG 376
           GLGLLPQ R  F+  RM++        ALIVLEGLDRSGKSSQCARLLSFLQGKGC  EG
Sbjct: 25  GLGLLPQWRGVFRSVRMESGSSQGGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEG 84

Query: 377 WRFPDRDTSVGKMISAYLANESQLDDRTIHLLFSANRWEKRSLMESKLLGGTTLVVDRYS 556
           WRFPDR TSVG+MISAYLANES+LDDRTIHLLFSANRWEKR+LME KLLGGTTL+VDRYS
Sbjct: 85  WRFPDRGTSVGQMISAYLANESELDDRTIHLLFSANRWEKRALMERKLLGGTTLIVDRYS 144

Query: 557 YSGVAFSAAKGLDIGWCKAPEVGLLAPDLVIYLDVQPEKAAXXXXXXXXXXXXVEFQKSV 736
           YSGVAFSAAKGLDI WCKAPE GL+APDLV+YLDVQPEKAA            +EFQK V
Sbjct: 145 YSGVAFSAAKGLDIEWCKAPENGLIAPDLVVYLDVQPEKAAERGGYGGERYEKIEFQKKV 204

Query: 737 AGHYHSLRDSTWKVVDGSLPMETVEEQLRELAMNCISECQDKQLTNLAW 883
             HYHSLRDSTWKVVDGSLPME VEEQL+ELAM+CI ECQ KQL +LAW
Sbjct: 205 GEHYHSLRDSTWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLAW 253



to top

>AK069168:Os11g0220700 |
          Length = 199

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 184 DAGAPAP--RSCSPGEPNQRSHAQASIPGTGSGG 89
           DAG P P  R  SP +P + S   +S  GTGSGG
Sbjct: 3   DAGGPLPGERRLSPADPEEPSPPASSSDGTGSGG 36



to top

>Os07g0599400:Os07g0599400 |
          Length = 139

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 12/97 (12%)
 Frame = -2

Query: 370 GCAAFPLQKGQQPGALRRLAAPVQPLQDYE------------RXXXXXXXAVIHPRTLER 227
           G AA P ++G      RR AA  Q                  R       A    R LE 
Sbjct: 42  GSAAAPARRGAAASPARRGAAAAQAWATVAAPARRGAAAAPARRGEEAQGAAAAARALE- 100

Query: 226 GPALREQAEATRSRDAGAPAPRSCSPGEPNQRSHAQA 116
            PA R  A A   R + AP+PR  SP  P +R+ A A
Sbjct: 101 APAARGAAAARARRGSAAPSPRGASPCCPWRRTRAAA 137



to top

>AK106729:Os08g0326000 |
          Length = 251

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +3

Query: 159 LLGAGAPASRLRVASACSLSAGPRSRVRGWITXXXXXXXXXXXXWRGWTGAASRRSAPGC 338
           ++ AG+  SR+ V +  S +A   +    WI                W   AS ++APGC
Sbjct: 86  VIDAGSTRSRVHVIAYRSPAASAAAAALPWID---------------WARTASMKAAPGC 130

Query: 339 CP 344
           CP
Sbjct: 131 CP 132



to top

>Os08g0135600:Os08g0135600 |
          Length = 523

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 291 WRGWTGAASRRSAPGCCP 344
           W  W   AS ++APGCCP
Sbjct: 211 WIDWARTASMKAAPGCCP 228



to top

>Os06g0249500:Os06g0249500 |
          Length = 630

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 REQAEATRSRDAGAPAPRSCSPGEPNQRSHAQASIPGTGSGGRLS 80
           R+QA +T   + G   PRSC  G  N  S  +A  PG  +G R S
Sbjct: 565 RQQAGSTEPSNGGRVLPRSCGLGGEN--SEMEAVHPGNEAGMRRS 607



to top

>AK109061:Os05g0165500 |
          Length = 227

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 14  STNPSFVSPLPLAVGAAAAIHRRQPSAATRSRYTRLC 124
           S++ S+ SP  +++     +H+  P A  RS +TR C
Sbjct: 130 SSSWSYSSPSSVSMSPVFTVHQASPMAVARSHHTRAC 166



to top

>AK106406:Os12g0605100 |
          Length = 472

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = -2

Query: 436 VGEVRGDHLPDAGVSVREAPPFGCAAFPLQK-------GQQPGALRRLAAPV 302
           VGE R     DA +  R APP G A  P ++       G+Q   +RR AA +
Sbjct: 370 VGEDRAARAGDAALPARAAPPRGGARHPPRRRRRGDGGGEQRQVVRRRAAAI 421



to top

>AK102886:Os02g0288200 |
          Length = 578

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 244 PRTLERGPALREQAEATRSRDAGAPAPR-SCSPGEPNQRSHAQASIPGTGSG 92
           P  +++  A + +AEA + R A  PAP       +P + S A A  P   SG
Sbjct: 105 PEPVKKESAKKAKAEAKKKRAAPEPAPSGKAKKAKPEKSSSAAAPEPAPSSG 156



to top

>AK069116:Os04g0488500 |
          Length = 801

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +2

Query: 287 VLEGLDRSGKSSQCARLLSFLQGKGCA 367
           +++GL R G+S +  +LLS ++ KGC+
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCS 581



to top

>AK067112:Os05g0144000 |
          Length = 521

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 731 SVAGHYHSLRDSTWKVVDGSLPMETV 808
           S+AGH + L D+ W+   G+LP+ T+
Sbjct: 44  SLAGHLNDLSDAQWRNFRGNLPVLTI 69



to top

>Os12g0569900:Os12g0569900 |
          Length = 296

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = +1

Query: 280 AHSPGGAGQERQVVAVRPAAVLSARERLRNRRVALPGQRH 399
           A +P  A Q++Q    RPA V+S  ER R  RVA  G RH
Sbjct: 58  ASAPAAAAQQQQP---RPA-VVSMSERARLARVAAAGARH 93


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 32,429,040
Number of extensions: 732353
Number of successful extensions: 2860
Number of sequences better than 10.0: 12
Number of HSP's gapped: 2852
Number of HSP's successfully gapped: 12
Length of query: 387
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 284
Effective length of database: 11,275,632
Effective search space: 3202279488
Effective search space used: 3202279488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top