| Clone Name | FLbaf126i01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK242510.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080311G07, full insert sequence Length = 1133 Score = 513 bits (259), Expect = e-142 Identities = 532/623 (85%) Strand = Plus / Plus Query: 264 agggcggccgcggcgcgctcatagtcctggaggggctggacaggagcggcaagtcgtcgc 323 |||| ||||| || || |||||||||||||| |||||||| ||||| || || || |||| Sbjct: 319 agggtggccgtggtgccctcatagtcctggaagggctggataggagtgggaaatcttcgc 378 Query: 324 agtgcgcccggctgctgtcctttctgcaagggaaaggctgcgcaaccgaagggtggcgct 383 |||| || ||||||||||||||||||||||| ||||| ||| ||||||||||||| | Sbjct: 379 agtgtgctcggctgctgtcctttctgcaaggtaaaggttgccaggccgaagggtggcggt 438 Query: 384 tcccggacagagacaccagcgtcgggaagatgatctccgcgtacctcgccaacgagtcgc 443 | || || |||| || || || ||| ||||||| ||||||||||| || ||||||||| Sbjct: 439 ttcctgatagaggtactagtgttgggcagatgatatccgcgtaccttgcgaacgagtcgg 498 Query: 444 agctcgatgaccggaccatccatctgctcttcagcgcaaatcgctgggagaaaagaagtt 503 | || || || |||| |||||| |||||||||| || |||||||||||||||||| || Sbjct: 499 aacttgacgataggacaatccatttgctcttcagtgcgaatcgctgggagaaaagagctt 558 Query: 504 tgatggaaagcaagctactaggtggaactacactcgttgttgaccgctattcttattctg 563 |||||||||| |||||||| ||||||||||| ||| ||||||| || ||||||||||||| Sbjct: 559 tgatggaaagaaagctacttggtggaactactctcattgttgatcgttattcttattctg 618 Query: 564 gagtcgcattttcagctgctaaaggacttgacattgggtggtgcaaggcccctgaggttg 623 |||| |||||||||||||| || ||||||||||||| |||||||||||| ||||| || Sbjct: 619 gagtggcattttcagctgccaagggacttgacattgagtggtgcaaggctcctgaaaatg 678 Query: 624 gactgctagctccagatcttgtaatatatcttgatgtacaaccagagaaagcggccgaaa 683 |||| |||| |||||||||||| ||||| | |||||||||||||||||||| || |||| Sbjct: 679 gacttatagccccagatcttgtagtatatttggatgtacaaccagagaaagcagctgaaa 738 Query: 684 gaggaggctatgggggtgaaagatatgaaagagttgagttccaaaagagtgttgctgggc 743 ||||||||||||||||||| |||||||||| | |||| |||||||||| |||| || || Sbjct: 739 gaggaggctatgggggtgagagatatgaaaaaattgaattccaaaagaaagttggtgagc 798 Query: 744 attaccattccctccgtgattcgacatggaaggttgttgatggttcccttcccatggaga 803 |||||||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 799 attaccattcacttcgtgattcaacatggaaggttgttgatggctcccttcccatggaag 858 Query: 804 ctgtggaagaacagctaagagaactagccatgaattgcatttccgaatgccaagacaagc 863 ||||||||||||||| | ||||||||||||| ||||||| ||||||||| ||||| Sbjct: 859 ttgtggaagaacagctgaaggaactagccatgagttgcattctggaatgccaaagcaagc 918 Query: 864 aacttaccaatctggcctggtag 886 ||||| ||| ||||||||||||| Sbjct: 919 aacttgccagtctggcctggtag 941
>ref|NM_001066953.1| Oryza sativa (japonica cultivar-group) Os07g0639900 (Os07g0639900) mRNA, complete cds Length = 762 Score = 513 bits (259), Expect = e-142 Identities = 532/623 (85%) Strand = Plus / Plus Query: 264 agggcggccgcggcgcgctcatagtcctggaggggctggacaggagcggcaagtcgtcgc 323 |||| ||||| || || |||||||||||||| |||||||| ||||| || || || |||| Sbjct: 140 agggtggccgtggtgccctcatagtcctggaagggctggataggagtgggaaatcttcgc 199 Query: 324 agtgcgcccggctgctgtcctttctgcaagggaaaggctgcgcaaccgaagggtggcgct 383 |||| || ||||||||||||||||||||||| ||||| ||| ||||||||||||| | Sbjct: 200 agtgtgctcggctgctgtcctttctgcaaggtaaaggttgccaggccgaagggtggcggt 259 Query: 384 tcccggacagagacaccagcgtcgggaagatgatctccgcgtacctcgccaacgagtcgc 443 | || || |||| || || || ||| ||||||| ||||||||||| || ||||||||| Sbjct: 260 ttcctgatagaggtactagtgttgggcagatgatatccgcgtaccttgcgaacgagtcgg 319 Query: 444 agctcgatgaccggaccatccatctgctcttcagcgcaaatcgctgggagaaaagaagtt 503 | || || || |||| |||||| |||||||||| || |||||||||||||||||| || Sbjct: 320 aacttgacgataggacaatccatttgctcttcagtgcgaatcgctgggagaaaagagctt 379 Query: 504 tgatggaaagcaagctactaggtggaactacactcgttgttgaccgctattcttattctg 563 |||||||||| |||||||| ||||||||||| ||| ||||||| || ||||||||||||| Sbjct: 380 tgatggaaagaaagctacttggtggaactactctcattgttgatcgttattcttattctg 439 Query: 564 gagtcgcattttcagctgctaaaggacttgacattgggtggtgcaaggcccctgaggttg 623 |||| |||||||||||||| || ||||||||||||| |||||||||||| ||||| || Sbjct: 440 gagtggcattttcagctgccaagggacttgacattgagtggtgcaaggctcctgaaaatg 499 Query: 624 gactgctagctccagatcttgtaatatatcttgatgtacaaccagagaaagcggccgaaa 683 |||| |||| |||||||||||| ||||| | |||||||||||||||||||| || |||| Sbjct: 500 gacttatagccccagatcttgtagtatatttggatgtacaaccagagaaagcagctgaaa 559 Query: 684 gaggaggctatgggggtgaaagatatgaaagagttgagttccaaaagagtgttgctgggc 743 ||||||||||||||||||| |||||||||| | |||| |||||||||| |||| || || Sbjct: 560 gaggaggctatgggggtgagagatatgaaaaaattgaattccaaaagaaagttggtgagc 619 Query: 744 attaccattccctccgtgattcgacatggaaggttgttgatggttcccttcccatggaga 803 |||||||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 620 attaccattcacttcgtgattcaacatggaaggttgttgatggctcccttcccatggaag 679 Query: 804 ctgtggaagaacagctaagagaactagccatgaattgcatttccgaatgccaagacaagc 863 ||||||||||||||| | ||||||||||||| ||||||| ||||||||| ||||| Sbjct: 680 ttgtggaagaacagctgaaggaactagccatgagttgcattctggaatgccaaagcaagc 739 Query: 864 aacttaccaatctggcctggtag 886 ||||| ||| ||||||||||||| Sbjct: 740 aacttgccagtctggcctggtag 762
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 141 bits (71), Expect = 6e-30 Identities = 194/235 (82%) Strand = Plus / Minus Query: 264 agggcggccgcggcgcgctcatagtcctggaggggctggacaggagcggcaagtcgtcgc 323 |||| ||||| || || |||||||||||||| |||||||| ||||| || || || |||| Sbjct: 26579624 agggtggccgtggtgccctcatagtcctggaagggctggataggagtgggaaatcttcgc 26579565 Query: 324 agtgcgcccggctgctgtcctttctgcaagggaaaggctgcgcaaccgaagggtggcgct 383 |||| || ||||||||||||||||||||||| ||||| ||| ||||||||||||| | Sbjct: 26579564 agtgtgctcggctgctgtcctttctgcaaggtaaaggttgccaggccgaagggtggcggt 26579505 Query: 384 tcccggacagagacaccagcgtcgggaagatgatctccgcgtacctcgccaacgagtcgc 443 | || || |||| || || || ||| ||||||| ||||||||||| || ||||||||| Sbjct: 26579504 ttcctgatagaggtactagtgttgggcagatgatatccgcgtaccttgcgaacgagtcgg 26579445 Query: 444 agctcgatgaccggaccatccatctgctcttcagcgcaaatcgctgggagaaaag 498 | || || || |||| |||||| |||||||||| || ||||||||||||||||| Sbjct: 26579444 aacttgacgataggacaatccatttgctcttcagtgcgaatcgctgggagaaaag 26579390 Score = 139 bits (70), Expect = 3e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 502 tttgatggaaagcaagctactaggtggaactacactcgttgttgaccgctattcttattc 561 |||||||||||| |||||||| ||||||||||| ||| ||||||| || ||||||||||| Sbjct: 26579230 tttgatggaaagaaagctacttggtggaactactctcattgttgatcgttattcttattc 26579171 Query: 562 tggagtcgcattttcagctgctaaaggacttgacattgggtggtgcaagg 611 |||||| |||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 26579170 tggagtggcattttcagctgccaagggacttgacattgagtggtgcaagg 26579121 Score = 113 bits (57), Expect = 1e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 669 agaaagcggccgaaagaggaggctatgggggtgaaagatatgaaagagttgagttccaaa 728 ||||||| || ||||||||||||||||||||||| |||||||||| | |||| ||||||| Sbjct: 26578476 agaaagcagctgaaagaggaggctatgggggtgagagatatgaaaaaattgaattccaaa 26578417 Query: 729 agagtgttgctgggcattaccattccctccgtgattcgacatggaaggt 777 ||| |||| || |||||||||||| || |||||||| ||||||||||| Sbjct: 26578416 agaaagttggtgagcattaccattcacttcgtgattcaacatggaaggt 26578368 Score = 105 bits (53), Expect = 4e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 774 aggttgttgatggttcccttcccatggagactgtggaagaacagctaagagaactagcca 833 ||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||| Sbjct: 26578119 aggttgttgatggctcccttcccatggaagttgtggaagaacagctgaaggaactagcca 26578060 Query: 834 tgaattgcatttccgaatgccaagacaagcaacttaccaatctggcctggtag 886 ||| ||||||| ||||||||| |||||||||| ||| ||||||||||||| Sbjct: 26578059 tgagttgcattctggaatgccaaagcaagcaacttgccagtctggcctggtag 26578007 Score = 50.1 bits (25), Expect = 0.018 Identities = 37/41 (90%) Strand = Plus / Minus Query: 630 tagctccagatcttgtaatatatcttgatgtacaaccagag 670 |||| |||||||||||| ||||| | ||||||||||||||| Sbjct: 26579011 tagccccagatcttgtagtatatttggatgtacaaccagag 26578971 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 tcctctcgccgtcggcgccgccgccg 68 |||||||||||||| ||||||||||| Sbjct: 443758 tcctctcgccgtcgccgccgccgccg 443783 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 26858324 cgccgtcggcgccgccgccgcc 26858303 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgcca 71 |||||||||| |||||||||||||| Sbjct: 18635514 ctcgccgtcgccgccgccgccgcca 18635538
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 141 bits (71), Expect = 6e-30 Identities = 194/235 (82%) Strand = Plus / Minus Query: 264 agggcggccgcggcgcgctcatagtcctggaggggctggacaggagcggcaagtcgtcgc 323 |||| ||||| || || |||||||||||||| |||||||| ||||| || || || |||| Sbjct: 124895 agggtggccgtggtgccctcatagtcctggaagggctggataggagtgggaaatcttcgc 124836 Query: 324 agtgcgcccggctgctgtcctttctgcaagggaaaggctgcgcaaccgaagggtggcgct 383 |||| || ||||||||||||||||||||||| ||||| ||| ||||||||||||| | Sbjct: 124835 agtgtgctcggctgctgtcctttctgcaaggtaaaggttgccaggccgaagggtggcggt 124776 Query: 384 tcccggacagagacaccagcgtcgggaagatgatctccgcgtacctcgccaacgagtcgc 443 | || || |||| || || || ||| ||||||| ||||||||||| || ||||||||| Sbjct: 124775 ttcctgatagaggtactagtgttgggcagatgatatccgcgtaccttgcgaacgagtcgg 124716 Query: 444 agctcgatgaccggaccatccatctgctcttcagcgcaaatcgctgggagaaaag 498 | || || || |||| |||||| |||||||||| || ||||||||||||||||| Sbjct: 124715 aacttgacgataggacaatccatttgctcttcagtgcgaatcgctgggagaaaag 124661 Score = 139 bits (70), Expect = 3e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 502 tttgatggaaagcaagctactaggtggaactacactcgttgttgaccgctattcttattc 561 |||||||||||| |||||||| ||||||||||| ||| ||||||| || ||||||||||| Sbjct: 124501 tttgatggaaagaaagctacttggtggaactactctcattgttgatcgttattcttattc 124442 Query: 562 tggagtcgcattttcagctgctaaaggacttgacattgggtggtgcaagg 611 |||||| |||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 124441 tggagtggcattttcagctgccaagggacttgacattgagtggtgcaagg 124392 Score = 113 bits (57), Expect = 1e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 669 agaaagcggccgaaagaggaggctatgggggtgaaagatatgaaagagttgagttccaaa 728 ||||||| || ||||||||||||||||||||||| |||||||||| | |||| ||||||| Sbjct: 123747 agaaagcagctgaaagaggaggctatgggggtgagagatatgaaaaaattgaattccaaa 123688 Query: 729 agagtgttgctgggcattaccattccctccgtgattcgacatggaaggt 777 ||| |||| || |||||||||||| || |||||||| ||||||||||| Sbjct: 123687 agaaagttggtgagcattaccattcacttcgtgattcaacatggaaggt 123639 Score = 105 bits (53), Expect = 4e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 774 aggttgttgatggttcccttcccatggagactgtggaagaacagctaagagaactagcca 833 ||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||| Sbjct: 123390 aggttgttgatggctcccttcccatggaagttgtggaagaacagctgaaggaactagcca 123331 Query: 834 tgaattgcatttccgaatgccaagacaagcaacttaccaatctggcctggtag 886 ||| ||||||| ||||||||| |||||||||| ||| ||||||||||||| Sbjct: 123330 tgagttgcattctggaatgccaaagcaagcaacttgccagtctggcctggtag 123278 Score = 50.1 bits (25), Expect = 0.018 Identities = 37/41 (90%) Strand = Plus / Minus Query: 630 tagctccagatcttgtaatatatcttgatgtacaaccagag 670 |||| |||||||||||| ||||| | ||||||||||||||| Sbjct: 124282 tagccccagatcttgtagtatatttggatgtacaaccagag 124242
>gb|AY112487.1| Zea mays CL33166_-1 mRNA sequence Length = 556 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 779 gttgatggttcccttcccatggagactgtggaag 812 |||||||||| |||||||||||||||||| |||| Sbjct: 554 gttgatggtttccttcccatggagactgttgaag 521
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgccatc 73 ||||||||||| |||||||||||||||| Sbjct: 18793128 tctcgccgtcgccgccgccgccgccatc 18793155 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 14638380 tctcgccgtcgccgccgccgccgcc 14638404
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||||| Sbjct: 23918796 ctcgccgtcggcgccgccgccgcc 23918773 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 37808565 ctcgccgtcgccgccgccgccgccatc 37808591
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||||| Sbjct: 65200 ctcgccgtcggcgccgccgccgcc 65177
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||||| Sbjct: 33318 ctcgccgtcggcgccgccgccgcc 33295
>ref|NM_001051477.1| Oryza sativa (japonica cultivar-group) Os01g0872000 (Os01g0872000) mRNA, partial cds Length = 1795 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 421 ctcgccgtcgccgccgccgccgccatc 447
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 256 cggcggcaagggcggccgcggcg 278 ||||||||||||||||||||||| Sbjct: 2868034 cggcggcaagggcggccgcggcg 2868056
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 29921 ctcgccgtcgccgccgccgccgccatc 29947
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 136866 ctcgccgtcgccgccgccgccgccatc 136892
>dbj|AK102239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088C23, full insert sequence Length = 1796 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 422 ctcgccgtcgccgccgccgccgccatc 448
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgccatc 73 |||||||||| |||||||||||||||| Sbjct: 67813 ctcgccgtcgccgccgccgccgccatc 67839
>emb|CT835645.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA219K04, full insert sequence Length = 2118 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 1601 cttcctctcgccgccgccgccgccgccgcc 1572
>ref|NM_001066989.1| Oryza sativa (japonica cultivar-group) Os07g0645300 (Os07g0645300) mRNA, complete cds Length = 917 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 376 cgccgtcggcgccgccgccgcc 355
>ref|NM_001065250.1| Oryza sativa (japonica cultivar-group) Os07g0108200 (Os07g0108200) mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 43 tcctctcgccgtcggcgccgccgccg 68 |||||||||||||| ||||||||||| Sbjct: 244 tcctctcgccgtcgccgccgccgccg 219
>ref|NM_001052637.1| Oryza sativa (japonica cultivar-group) Os02g0182900 (Os02g0182900) mRNA, complete cds Length = 1755 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 76 cttcctctcgccgccgccgccgccgccgcc 105
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcggcggcaagggcggccgcggcg 278 ||||||||||| |||||||||||||| Sbjct: 955203 cggcggcggcaggggcggccgcggcg 955228
>gb|DQ519377.1| Sus scrofa transforming growth factor beta type 1 receptor (TGFBR1) gene, complete cds Length = 75340 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1100 ttctttgcccatttatctttgtgtggttga 1129 |||||||||||||| ||||| ||||||||| Sbjct: 48850 ttctttgcccatttttctttctgtggttga 48879
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 17939 cgccgtcggcgccgccgccgcc 17960
>gb|AY521594.1| Pemphigus bursarius microsatellite Pb86 sequence Length = 158 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatccaccg 78 |||| ||| ||||||||||||||||||||| Sbjct: 105 cgccatcgccgccgccgccgccatccaccg 76
>gb|AY022787.1| Oryza sativa microsatellite MRG5112 containing (CGC)X8, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 93 cttcctctcgccgccgccgccgccgccgcc 122
>gb|BT018374.1| Zea mays clone EL01N0306H01.d mRNA sequence Length = 1354 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ctctcgccgtcggcgccgccgccgcc 70 ||||||||| |||||||||||||||| Sbjct: 39 ctctcgccgccggcgccgccgccgcc 64
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 24738 cttcctctcgccgccgccgccgccgccgcc 24709
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 46240 cgccgtcggcgccgccgccgcc 46261
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 720994 cgccgtcggcgccgccgccgcc 721015 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 ggcggcggcaagggcggccgcggcg 278 |||||||||||||||||| |||||| Sbjct: 506736 ggcggcggcaagggcggcggcggcg 506760
>ref|NM_001025832.1| Caenorhabditis elegans C17H1.9 (C17H1.9) mRNA, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 700 tgaaagatatgaaagagttgag 721 |||||||||||||||||||||| Sbjct: 641 tgaaagatatgaaagagttgag 662
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 25086274 cttcctctcgccgccgccgccgccgccgcc 25086245
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 4634538 cttcctctcgccgccgccgccgccgccgcc 4634509 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ctctcgccgtcggcgccgccgccgcc 70 |||||||||||| ||||||||||||| Sbjct: 22627201 ctctcgccgtcgccgccgccgccgcc 22627226 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 8353418 cgccgtcgtcgccgccgccgccatc 8353442 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 28441204 cgccgtcggcgccgccgccgc 28441224
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 11653908 cgccgtcggcgccgccgccgcc 11653929 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 gccgtcggcgccgccgccgccatcc 74 ||||||||||||||||||| ||||| Sbjct: 10005123 gccgtcggcgccgccgccggcatcc 10005099 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgccatcc 74 |||||||| || ||||||||||||||||| Sbjct: 15459286 tctcgccggcgccgccgccgccgccatcc 15459258 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 |||||||| |||||||||||||||| Sbjct: 27203251 tctcgccgccggcgccgccgccgcc 27203275
>gb|AF267195.1|AF267195 Pemphigus bursarius microsatellite Pb 23 sequence Length = 144 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatccaccg 78 |||| ||| ||||||||||||||||||||| Sbjct: 91 cgccatcgccgccgccgccgccatccaccg 62
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 6915 cgccgtcggcgccgccgccgcc 6894
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 tcctctcgccgtcggcgccgccgccg 68 |||||||||||||| ||||||||||| Sbjct: 45922 tcctctcgccgtcgccgccgccgccg 45947
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 6610 cttcctctcgccgccgccgccgccgccgcc 6581
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ctctcgccgtcggcgccgccgccgcc 70 |||||||||||| ||||||||||||| Sbjct: 75012 ctctcgccgtcgccgccgccgccgcc 75037
>dbj|AK120718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D22, full insert sequence Length = 1756 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 cttcctctcgccgtcggcgccgccgccgcc 70 ||||||||||||| || ||||||||||||| Sbjct: 77 cttcctctcgccgccgccgccgccgccgcc 106
>dbj|AK108931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A06, full insert sequence Length = 917 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgcc 70 |||||||||||||||||||||| Sbjct: 376 cgccgtcggcgccgccgccgcc 355
>gb|DQ990836.1| Mycobacterium tuberculosis proteasome accessory factor operon, complete sequence Length = 4210 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 211 cgccgtcgccgccgccgccgccatc 187
>dbj|AK242584.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090010K24, full insert sequence Length = 2514 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 1234 cgccgtcggcgccgccgccgc 1254
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tcgccgtcggcgccgccgccg 68 ||||||||||||||||||||| Sbjct: 2893151 tcgccgtcggcgccgccgccg 2893131
>ref|NM_001072775.1| Oryza sativa (japonica cultivar-group) Os12g0165500 (Os12g0165500) mRNA, complete cds Length = 1782 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 903 tctcgccgtcgccgccgccgccgcc 927
>ref|NM_001072774.1| Oryza sativa (japonica cultivar-group) Os12g0165600 (Os12g0165600) mRNA, complete cds Length = 2103 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 1513 tctcgccgtcgccgccgccgccgcc 1489
>ref|NM_001071270.1| Oryza sativa (japonica cultivar-group) Os10g0452500 (Os10g0452500) mRNA, complete cds Length = 813 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 ggcggcggcaagggcggccgcggcg 278 |||||||||||||||||| |||||| Sbjct: 715 ggcggcggcaagggcggcggcggcg 739
>ref|NM_001071236.1| Oryza sativa (japonica cultivar-group) Os10g0442900 (Os10g0442900) mRNA, complete cds Length = 2727 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 140 cgccgtcggcgccgccgccgc 160
>ref|NM_001071211.1| Oryza sativa (japonica cultivar-group) Os10g0437200 (Os10g0437200) mRNA, complete cds Length = 3662 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ccgtcggcgccgccgccgcca 71 ||||||||||||||||||||| Sbjct: 255 ccgtcggcgccgccgccgcca 275
>ref|NM_001069699.1| Oryza sativa (japonica cultivar-group) Os09g0413500 (Os09g0413500) mRNA, partial cds Length = 562 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 84 tctcgccgtcgccgccgccgccgcc 60
>ref|NM_001066245.1| Oryza sativa (japonica cultivar-group) Os07g0498400 (Os07g0498400) mRNA, complete cds Length = 3825 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcca 71 |||||||||| |||||||||||||| Sbjct: 3213 ctcgccgtcgccgccgccgccgcca 3189
>ref|NM_001063713.1| Oryza sativa (japonica cultivar-group) Os06g0222100 (Os06g0222100) mRNA, complete cds Length = 1791 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 1465 gccgtcggcgccgccgccgcc 1485
>ref|NM_001061068.1| Oryza sativa (japonica cultivar-group) Os05g0127400 (Os05g0127400) mRNA, partial cds Length = 1192 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 101 tctcgccgtcgccgccgccgccgcc 125
>ref|NM_001054331.1| Oryza sativa (japonica cultivar-group) Os02g0692000 (Os02g0692000) mRNA, complete cds Length = 2120 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 825 cgccgtcggcgccgccgccgc 805
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgtcggcgccgccgccgccat 72 ||||||||||||||||||||| Sbjct: 340684 cgtcggcgccgccgccgccat 340664
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 ggcggcggcaagggcggccgcggcgcgct 282 ||||||||| |||||||||||||||||| Sbjct: 1332480 ggcggcggcgcgggcggccgcggcgcgct 1332452
>gb|AY023446.1| Oryza sativa microsatellite MRG5771 containing (TCC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 180 tctcgccgtcgccgccgccgccgcc 156
>gb|AY022859.1| Oryza sativa microsatellite MRG5184 containing (CGG)X8, closest to marker C285, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcca 71 |||||||||| |||||||||||||| Sbjct: 218 ctcgccgtcgccgccgccgccgcca 194
>gb|AY022785.1| Oryza sativa microsatellite MRG5110 containing (CGC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 92 tctcgccgtcgccgccgccgccgcc 116
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgccgccgccgccatccaccg 78 ||||||||||||||||||||| Sbjct: 72269 cgccgccgccgccatccaccg 72249
>ref|XM_867191.1| PREDICTED: Bos taurus similar to transmembrane protein 28 (LOC615395), mRNA Length = 1096 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cggcggcggcaagggcggccg 273 ||||||||||||||||||||| Sbjct: 439 cggcggcggcaagggcggccg 459
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 |||||||| |||||||||||||||| Sbjct: 66963 tctcgccgccggcgccgccgccgcc 66939
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 2359425 cgccgtcgccgccgccgccgccatc 2359449
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 2847166 cgccgtcggcgccgccgccgc 2847146
>gb|BC025965.1| Homo sapiens cDNA clone IMAGE:5458710 Length = 3163 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 83 tctcgccgtcgccgccgccgccgcc 59
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgccatcc 74 |||||||| || ||||||||||||||||| Sbjct: 36774 tctcgccggcgccgccgccgccgccatcc 36802
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 gccgtcggcgccgccgccgccatcc 74 ||||||||||||||||||| ||||| Sbjct: 56918 gccgtcggcgccgccgccggcatcc 56894
>dbj|AK055057.1| Homo sapiens cDNA FLJ30495 fis, clone BRAWH2000323, moderately similar to Proline rich protein Length = 2404 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 53 tctcgccgtcgccgccgccgccgcc 29
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tcgccgtcggcgccgccgccg 68 ||||||||||||||||||||| Sbjct: 2565110 tcgccgtcggcgccgccgccg 2565090
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ggcggcaagggcggccgcggc 277 ||||||||||||||||||||| Sbjct: 719176 ggcggcaagggcggccgcggc 719196
>ref|NM_001034496.1| Bos taurus similar to XAP-5 protein (MGC128215), mRNA gb|BC103028.1| Bos taurus similar to XAP-5 protein, mRNA (cDNA clone MGC:128215 IMAGE:7958862), complete cds Length = 1799 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tcgccgtcggcgccgccgccgccat 72 ||||||||| ||||||||||||||| Sbjct: 54 tcgccgtcgccgccgccgccgccat 78
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ggcggcggcaagggcggccgcggcg 278 |||||||||||||||||| |||||| Sbjct: 158385 ggcggcggcaagggcggcggcggcg 158361
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 3322180 tctcgccgtcgccgccgccgccgcc 3322204 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 22013437 cgccgtcgtcgccgccgccgccatc 22013413 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 22021969 cgccgtcgtcgccgccgccgccatc 22021945
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ccgtcggcgccgccgccgcca 71 ||||||||||||||||||||| Sbjct: 15130022 ccgtcggcgccgccgccgcca 15130002 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 15414767 cgccgtcggcgccgccgccgc 15414787 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ggcggcggcaagggcggccgcggcg 278 |||||||||||||||||| |||||| Sbjct: 15986861 ggcggcggcaagggcggcggcggcg 15986837
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 6289110 gccgtcggcgccgccgccgcc 6289090
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 1493160 tctcgccgtcgccgccgccgccgcc 1493184 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgccgccgccgccatccaccg 78 ||||||||||||||||||||| Sbjct: 24558087 cgccgccgccgccatccaccg 24558067 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 28807651 gccgtcggcgccgccgccgcc 28807671
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 6635312 cgccgtcgtcgccgccgccgccatc 6635336 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cgccgccgccgccatccaccg 78 ||||||||||||||||||||| Sbjct: 20807813 cgccgccgccgccatccaccg 20807833
>gb|AF145785.1|SBVP1S1 Sorghum bicolor genomic sequence similar to vp1 maize gene Length = 734 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcgccgtcggcgccgccgccgcca 71 ||||||| ||||||||||||||||| Sbjct: 222 ctcgccgccggcgccgccgccgcca 198
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 278454 cgccgtcgccgccgccgccgccatc 278478
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 134000 cgccgtcgccgccgccgccgccatc 134024
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 178628 gccgtcggcgccgccgccgcc 178648
>emb|AL834239.1|HSM805265 Homo sapiens mRNA; cDNA DKFZp547N082 (from clone DKFZp547N082) Length = 2143 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 88 tctcgccgtcgccgccgccgccgcc 64
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 55753 cgccgtcgtcgccgccgccgccatc 55777
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cgccgccgccgccatccaccg 78 ||||||||||||||||||||| Sbjct: 54538 cgccgccgccgccatccaccg 54558
>gb|AC093776.3| Homo sapiens BAC clone RP11-145G20 from 4, complete sequence Length = 159937 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1093 gctgaatttctttgcccatttatct 1117 |||| |||||||||||||||||||| Sbjct: 129096 gctgtatttctttgcccatttatct 129072
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 132130 cgccgtcggcgccgccgccgc 132150
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ccgtcggcgccgccgccgcca 71 ||||||||||||||||||||| Sbjct: 38635 ccgtcggcgccgccgccgcca 38615
>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14, complete sequence Length = 135098 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ggcggcggcaagggcggccgcggcg 278 |||||||||||||||||| |||||| Sbjct: 1966 ggcggcggcaagggcggcggcggcg 1942
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgcca 71 |||||||||| |||||||||||||| Sbjct: 88056 ctcgccgtcgccgccgccgccgcca 88080
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 aactagccatgaattgcattt 845 ||||||||||||||||||||| Sbjct: 1697392 aactagccatgaattgcattt 1697372
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcgccgtcggcgccgccgccgcca 71 |||||||||| |||||||||||||| Sbjct: 60568 ctcgccgtcgccgccgccgccgcca 60592
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 65325 cgccgtcggcgccgccgccgc 65345
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 10045 cgccgtcggcgccgccgccgc 10065
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 83186 gccgtcggcgccgccgccgcc 83166
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 60047 tctcgccgtcgccgccgccgccgcc 60071
>gb|AC068669.21| Homo sapiens chromosome 17, clone RP11-749I16, complete sequence Length = 194780 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 164378 tctcgccgtcgccgccgccgccgcc 164354
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 6268 cgccgtcgtcgccgccgccgccatc 6292
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 130089 cgccgtcgtcgccgccgccgccatc 130113
>dbj|AK070774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072K15, full insert sequence Length = 2121 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgc 69 ||||||||||||||||||||| Sbjct: 826 cgccgtcggcgccgccgccgc 806
>dbj|AK070371.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E13, full insert sequence Length = 1782 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 880 tctcgccgtcgccgccgccgccgcc 856
>dbj|AK069823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029N24, full insert sequence Length = 1197 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 102 tctcgccgtcgccgccgccgccgcc 126
>dbj|AK066936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N21, full insert sequence Length = 3663 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ccgtcggcgccgccgccgcca 71 ||||||||||||||||||||| Sbjct: 256 ccgtcggcgccgccgccgcca 276
>dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D12, full insert sequence Length = 562 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 84 tctcgccgtcgccgccgccgccgcc 60
>emb|AJ336877.1|HSA336877 Homo sapiens genomic sequence surrounding NotI site, clone NB6-539R Length = 764 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||| ||||||||||||||||| Sbjct: 62 tctcgccttcggcgccgccgccgcc 86
>ref|NM_133264.4| Homo sapiens WAS/WASL interacting protein family, member 2 (WIPF2), mRNA Length = 5525 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 87 tctcgccgtcgccgccgccgccgcc 63
>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138308 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 119565 cgccgtcgtcgccgccgccgccatc 119541 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgtcggcgccgccgccgccatc 73 |||||||| |||||||||||||||| Sbjct: 128097 cgccgtcgtcgccgccgccgccatc 128073
>emb|BX072545.2|CNS09S4O Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0046P17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 7353 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 5487 tctcgccgtcgccgccgccgccgcc 5511
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 1233 tctcgccgtcgccgccgccgccgcc 1257
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 tctcgccgtcggcgccgccgccgcc 70 ||||||||||| ||||||||||||| Sbjct: 87240 tctcgccgtcgccgccgccgccgcc 87264
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gccgtcggcgccgccgccgcc 70 ||||||||||||||||||||| Sbjct: 65816 gccgtcggcgccgccgccgcc 65796 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 195,310,967 Number of extensions: 10598397 Number of successful extensions: 291158 Number of sequences better than 10.0: 108 Number of HSP's gapped: 291152 Number of HSP's successfully gapped: 136 Length of query: 1163 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1140 Effective length of database: 18,503,978,556 Effective search space: 21094535553840 Effective search space used: 21094535553840 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)