| Clone Name | FLbaf128o12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073796.1| Oryza sativa (japonica cultivar-group) Os12g0613500 (Os12g0613500) mRNA, complete cds Length = 1603 Score = 214 bits (108), Expect = 4e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 437 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 496 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 1113 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 1172 Query: 497 ttcgtattgggctaagggtggtgctgactctgggtacggtgcgaaggcacaggagattct 556 || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| Sbjct: 1173 ctcatattgggctaagggtggtgcagactctgggtatggtgcaaaggcacaagaggttct 1232 Query: 557 tggacaagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaaccta 616 ||| |||||||||||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 1233 tgggcaagttagaggaaggggctttagacatgagaagaccaagaagaagcgtggaaccta 1292 Query: 617 caagggtgggttcattgatctacaaacccactcgattaagtttaacaattcagacgacga 676 || ||||||| || ||| ||||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 1293 caggggtgggcagatcgatttacaaacccactcaatcaagttcaacgattcagatgacga 1352 Query: 677 gtgatcgc 684 |||||||| Sbjct: 1353 gtgatcgc 1360 Score = 89.7 bits (45), Expect = 2e-14 Identities = 135/165 (81%) Strand = Plus / Plus Query: 190 aagttgcagggaaagattcagctcccaaatcagatgatgaaaacaagactgcgatggatg 249 ||||||||||||||||||||||||| |||||| ||||||| ||||| | || ||||| Sbjct: 851 aagttgcagggaaagattcagctcctaaatcaaatgatgagaacaatagtggaatggaga 910 Query: 250 ttgagaaaggagaggatggaaaggcttcagctgatgatgcagttgttagcaagaagagga 309 |||||| || || |||||| | || || |||| |||| || ||| |||| ||| ||| Sbjct: 911 ctgagaagggggaaaatggaatgcctccaagtgataatgcggtagttggcaaaaagcgga 970 Query: 310 aactggaagaagttgaaggaagcaaaccccctgccaaagaagata 354 |||| |||||||| ||||||||||| | |||||| |||||||||| Sbjct: 971 aactagaagaagtcgaaggaagcaacctccctgctaaagaagata 1015
>dbj|AB118018.1| Oryza sativa (japonica cultivar-group) bip132 mRNA for BRI1-KD interacting protein 132, partial cds Length = 1131 Score = 214 bits (108), Expect = 4e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 437 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 496 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 622 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 681 Query: 497 ttcgtattgggctaagggtggtgctgactctgggtacggtgcgaaggcacaggagattct 556 || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| Sbjct: 682 ctcatattgggctaagggtggtgcagactctgggtatggtgcaaaggcacaagaggttct 741 Query: 557 tggacaagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaaccta 616 ||| |||||||||||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 742 tgggcaagttagaggaaggggctttagacatgagaagaccaagaagaagcgtggaaccta 801 Query: 617 caagggtgggttcattgatctacaaacccactcgattaagtttaacaattcagacgacga 676 || ||||||| || ||| ||||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 802 caggggtgggcagatcgatttacaaacccactcaatcaagttcaacgattcagatgacga 861 Query: 677 gtgatcgc 684 |||||||| Sbjct: 862 gtgatcgc 869 Score = 89.7 bits (45), Expect = 2e-14 Identities = 135/165 (81%) Strand = Plus / Plus Query: 190 aagttgcagggaaagattcagctcccaaatcagatgatgaaaacaagactgcgatggatg 249 ||||||||||||||||||||||||| |||||| ||||||| ||||| | || ||||| Sbjct: 360 aagttgcagggaaagattcagctcctaaatcaaatgatgagaacaatagtggaatggaga 419 Query: 250 ttgagaaaggagaggatggaaaggcttcagctgatgatgcagttgttagcaagaagagga 309 |||||| || || |||||| | || || |||| |||| || ||| |||| ||| ||| Sbjct: 420 ctgagaagggggaaaatggaatgcctccaagtgataatgcggtagttggcaaaaagcgga 479 Query: 310 aactggaagaagttgaaggaagcaaaccccctgccaaagaagata 354 |||| |||||||| ||||||||||| | |||||| |||||||||| Sbjct: 480 aactagaagaagtcgaaggaagcaacctccctgctaaagaagata 524
>dbj|AK101273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A11, full insert sequence Length = 1604 Score = 214 bits (108), Expect = 4e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 437 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 496 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 1114 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 1173 Query: 497 ttcgtattgggctaagggtggtgctgactctgggtacggtgcgaaggcacaggagattct 556 || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| Sbjct: 1174 ctcatattgggctaagggtggtgcagactctgggtatggtgcaaaggcacaagaggttct 1233 Query: 557 tggacaagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaaccta 616 ||| |||||||||||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 1234 tgggcaagttagaggaaggggctttagacatgagaagaccaagaagaagcgtggaaccta 1293 Query: 617 caagggtgggttcattgatctacaaacccactcgattaagtttaacaattcagacgacga 676 || ||||||| || ||| ||||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 1294 caggggtgggcagatcgatttacaaacccactcaatcaagttcaacgattcagatgacga 1353 Query: 677 gtgatcgc 684 |||||||| Sbjct: 1354 gtgatcgc 1361 Score = 91.7 bits (46), Expect = 4e-15 Identities = 142/174 (81%) Strand = Plus / Plus Query: 190 aagttgcagggaaagattcagctcccaaatcagatgatgaaaacaagactgcgatggatg 249 ||||||||||||||||||||||||| |||||| ||||||| ||||| | || ||||| Sbjct: 852 aagttgcagggaaagattcagctcctaaatcaaatgatgagaacaatagtggaatggaga 911 Query: 250 ttgagaaaggagaggatggaaaggcttcagctgatgatgcagttgttagcaagaagagga 309 |||||| || || |||||| | || || |||| |||| || ||| |||| ||| ||| Sbjct: 912 ctgagaagggggaaaatggaatgcctccaagtgataatgcggtagttggcaaaaagcgga 971 Query: 310 aactggaagaagttgaaggaagcaaaccccctgccaaagaagatatcactgcca 363 |||| |||||||| ||||||||||| | |||||| |||||||||| ||| |||| Sbjct: 972 aactagaagaagtcgaaggaagcaacctccctgctaaagaagataacacagcca 1025
>gb|AY111278.1| Zea mays CL31341_-1 mRNA sequence Length = 625 Score = 127 bits (64), Expect = 8e-26 Identities = 173/211 (81%) Strand = Plus / Minus Query: 470 atttgctgatgaaagactacaagataattcgtattgggctaagggtggtgctgactctgg 529 |||||| ||||| || || || ||||| |||||||||||||||||||| || ||| | || Sbjct: 455 atttgcagatgacaggcttcaggataactcgtattgggctaagggtggcgcagacaccgg 396 Query: 530 gtacggtgcgaaggcacaggagattcttggacaagttagaggaagggattttaggcacga 589 ||||| || |||||||||||||| ||||| ||||| | |||| ||||||||||| Sbjct: 395 ttacggcgcaaaggcacaggagatccttggccaagtcaagggaannnnntttaggcacga 336 Query: 590 gaagaccaagaagaagcgcggaacctacaagggtgggttcattgatctacaaacccactc 649 ||| |||||||||||||| || ||||||| ||| ||| || || || ||||||||||| Sbjct: 335 gaaaaccaagaagaagcgtggcacctacaggggcgggcaaatcgacctgcaaacccactc 276 Query: 650 gattaagtttaacaattcagacgacgagtga 680 ||| ||||| | |||||||||||||||||| Sbjct: 275 gatcaagttcgagaattcagacgacgagtga 245
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 579 tttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcattgatcta 638 ||||| || |||||||||||||||||||| |||||||||| ||||||| || ||| || Sbjct: 26026364 tttagacatgagaagaccaagaagaagcgtggaacctacaggggtgggcagatcgattta 26026423 Query: 639 caaacccactcgattaagtttaacaattcagacgacgagtgatcgc 684 ||||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 26026424 caaacccactcaatcaagttcaacgattcagatgacgagtgatcgc 26026469 Score = 89.7 bits (45), Expect = 2e-14 Identities = 135/165 (81%) Strand = Plus / Plus Query: 190 aagttgcagggaaagattcagctcccaaatcagatgatgaaaacaagactgcgatggatg 249 ||||||||||||||||||||||||| |||||| ||||||| ||||| | || ||||| Sbjct: 26024788 aagttgcagggaaagattcagctcctaaatcaaatgatgagaacaatagtggaatggaga 26024847 Query: 250 ttgagaaaggagaggatggaaaggcttcagctgatgatgcagttgttagcaagaagagga 309 |||||| || || |||||| | || || |||| |||| || ||| |||| ||| ||| Sbjct: 26024848 ctgagaagggggaaaatggaatgcctccaagtgataatgcggtagttggcaaaaagcgga 26024907 Query: 310 aactggaagaagttgaaggaagcaaaccccctgccaaagaagata 354 |||| |||||||| ||||||||||| | |||||| |||||||||| Sbjct: 26024908 aactagaagaagtcgaaggaagcaacctccctgctaaagaagata 26024952 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 511 agggtggtgctgactctgggtacggtgcgaaggcacaggagattcttggacaagttagag 570 |||||||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||||||| Sbjct: 26026172 agggtggtgcagactctgggtatggtgcaaaggcacaagaggttcttgggcaagttagag 26026231 Query: 571 gaagg 575 ||||| Sbjct: 26026232 gaagg 26026236 Score = 50.1 bits (25), Expect = 0.015 Identities = 64/77 (83%) Strand = Plus / Plus Query: 437 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 496 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 26025520 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 26025579 Query: 497 ttcgtattgggctaagg 513 || ||||||||||||| Sbjct: 26025580 ctcatattgggctaagg 26025596
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 579 tttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcattgatcta 638 ||||| || |||||||||||||||||||| |||||||||| ||||||| || ||| || Sbjct: 85307 tttagacatgagaagaccaagaagaagcgtggaacctacaggggtgggcagatcgattta 85248 Query: 639 caaacccactcgattaagtttaacaattcagacgacgagtgatcgc 684 ||||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 85247 caaacccactcaatcaagttcaacgattcagatgacgagtgatcgc 85202 Score = 89.7 bits (45), Expect = 2e-14 Identities = 135/165 (81%) Strand = Plus / Minus Query: 190 aagttgcagggaaagattcagctcccaaatcagatgatgaaaacaagactgcgatggatg 249 ||||||||||||||||||||||||| |||||| ||||||| ||||| | || ||||| Sbjct: 86883 aagttgcagggaaagattcagctcctaaatcaaatgatgagaacaatagtggaatggaga 86824 Query: 250 ttgagaaaggagaggatggaaaggcttcagctgatgatgcagttgttagcaagaagagga 309 |||||| || || |||||| | || || |||| |||| || ||| |||| ||| ||| Sbjct: 86823 ctgagaagggggaaaatggaatgcctccaagtgataatgcggtagttggcaaaaagcgga 86764 Query: 310 aactggaagaagttgaaggaagcaaaccccctgccaaagaagata 354 |||| |||||||| ||||||||||| | |||||| |||||||||| Sbjct: 86763 aactagaagaagtcgaaggaagcaacctccctgctaaagaagata 86719 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 511 agggtggtgctgactctgggtacggtgcgaaggcacaggagattcttggacaagttagag 570 |||||||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||||||| Sbjct: 85499 agggtggtgcagactctgggtatggtgcaaaggcacaagaggttcttgggcaagttagag 85440 Query: 571 gaagg 575 ||||| Sbjct: 85439 gaagg 85435 Score = 50.1 bits (25), Expect = 0.015 Identities = 64/77 (83%) Strand = Plus / Minus Query: 437 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 496 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 86151 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 86092 Query: 497 ttcgtattgggctaagg 513 || ||||||||||||| Sbjct: 86091 ctcatattgggctaagg 86075
>gb|AC174357.6| Medicago truncatula clone mth2-26c10, complete sequence Length = 98743 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 573 agggattttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcatt 632 ||||||||| | ||||| |||||||||||||| || || ||||| | |||||| | ||| Sbjct: 95285 agggattttcgccacgaaaagaccaagaagaaacgtgggacctataggggtggacttatt 95226 Query: 633 gatctacaaacccactcgattaagtttaacaattcagacgacgagtga 680 ||| |||| ||||||| |||||||||| ||||||| || |||||| Sbjct: 95225 gatttacattcccactcagttaagtttaattattcagatgaggagtga 95178
>gb|AC126781.22| Medicago truncatula clone mth2-12m15, complete sequence Length = 116119 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 573 agggattttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcatt 632 ||||||||| | ||||| |||||||||||||| || || ||||| | |||||| | ||| Sbjct: 105776 agggattttcgccacgaaaagaccaagaagaaacgtgggacctataggggtggacttatt 105835 Query: 633 gatctacaaacccactcgattaagtttaacaattcagacgacgagtga 680 ||| |||| ||||||| |||||||||| ||||||| || |||||| Sbjct: 105836 gatttacattcccactcagttaagtttaattattcagatgaggagtga 105883
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 21829155 cacgagaagaccaagaagaagcgcgg 21829180
>ref|NM_168941.2| Drosophila melanogaster Nopp140 CG7421-RA, transcript variant A (Nopp140), mRNA Length = 3104 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 2472 cacgagaagaccaagaagaagcgcgg 2497
>ref|NM_168940.1| Drosophila melanogaster Nopp140 CG7421-RB, transcript variant B (Nopp140), mRNA Length = 2747 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 2115 cacgagaagaccaagaagaagcgcgg 2140
>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178607 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 50304 cacgagaagaccaagaagaagcgcgg 50329
>gb|AY061181.1| Drosophila melanogaster LD14807 full length cDNA Length = 1585 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 936 cacgagaagaccaagaagaagcgcgg 961
>gb|BT021407.1| Drosophila melanogaster LD06749 full insert cDNA Length = 3072 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 2432 cacgagaagaccaagaagaagcgcgg 2457
>gb|AF162774.2| Drosophila melanogaster Nopp140-like nucleolar protein (Nopp140) mRNA, complete cds Length = 3028 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 585 cacgagaagaccaagaagaagcgcgg 610 |||||||||||||||||||||||||| Sbjct: 2374 cacgagaagaccaagaagaagcgcgg 2399
>gb|AC184175.2| Pan troglodytes BAC clone CH251-620C8 from chromosome y, complete sequence Length = 206754 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 61295 atattaaagttgctgatgaaagacta 61320
>gb|AC186881.3| Pan troglodytes BAC clone CH251-330K12 from chromosome y, complete sequence Length = 202937 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 82562 atattaaacttgctgatgaaagacta 82587
>ref|NM_125094.2| Arabidopsis thaliana unknown protein (AT5G57120) mRNA, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 984 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1041
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 461 agatattaaatttgctgatgaaagac 486 |||||||||||||| ||||||||||| Sbjct: 500908 agatattaaatttgatgatgaaagac 500933
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Minus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 210449 atattaaacttgctgatgaaagacta 210424
>gb|AE014212.1| Streptococcus agalactiae 2603V/R section 22 of 100 of the complete genome Length = 20965 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 461 agatattaaatttgctgatgaaagac 486 |||||||||||||| ||||||||||| Sbjct: 18943 agatattaaatttgatgatgaaagac 18968
>gb|AY127952.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 871 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 928
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Minus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 51865 atattaaacttgctgatgaaagacta 51840
>gb|AY056089.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 549 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 427 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 484
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 168621 atattaaacttgctgatgaaagacta 168646
>gb|AY084589.1| Arabidopsis thaliana clone 11265 mRNA, complete sequence Length = 1258 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 984 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1041
>gb|AY045686.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1258 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 980 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1037
>gb|AY037212.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 0.90 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 618 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 979 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1036
>emb|AL766845.1|SAG766845 Streptococcus agalactiae NEM316 complete genome, segment 3 Length = 178050 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 461 agatattaaatttgctgatgaaagac 486 |||||||||||||| ||||||||||| Sbjct: 143435 agatattaaatttgatgatgaaagac 143460
>emb|AJ248286.2|CNSPAX04 Pyrococcus abyssi complete genome; segment 4/6 Length = 287130 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 aggagaggatggaaaggcttca 278 |||||||||||||||||||||| Sbjct: 87755 aggagaggatggaaaggcttca 87734
>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete sequence Length = 185225 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 13833 atattaaagttgctgatgaaagacta 13858
>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete sequence Length = 206451 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Minus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 66776 atattaaacttgctgatgaaagacta 66751
>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete sequence Length = 165274 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 99800 atattaaacttgctgatgaaagacta 99825
>dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT37A01, TM0244, complete sequence Length = 102724 Score = 44.1 bits (22), Expect = 0.90 Identities = 37/42 (88%) Strand = Plus / Plus Query: 534 ggtgcgaaggcacaggagattcttggacaagttagaggaagg 575 ||||| || ||||| || |||||||| ||||||||||||||| Sbjct: 88819 ggtgcaaaagcacaagaaattcttggccaagttagaggaagg 88860
>gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chromosome y, complete sequence Length = 191546 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Minus Query: 463 atattaaatttgctgatgaaagacta 488 |||||||| ||||||||||||||||| Sbjct: 131379 atattaaacttgctgatgaaagacta 131354
>ref|NM_001076795.1| Canis familiaris myosin, heavy chain 2, skeletal muscle, adult (MYH2), mRNA Length = 5823 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2829 caagaagaggaaactggaaga 2849
>ref|NM_001076794.1| Canis familiaris myosin, heavy chain 4, skeletal muscle (MYH4), mRNA Length = 5820 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2826 caagaagaggaaactggaaga 2846
>gb|DQ227283.1| Canis familiaris developmental myosin heavy chain neonatal gene, complete cds Length = 27299 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 16946 caagaagaggaaactggaaga 16966
>gb|DQ227282.1| Canis familiaris fast myosin heavy chain 2B gene, complete cds Length = 23798 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 13248 caagaagaggaaactggaaga 13268
>gb|DQ227281.1| Canis familiaris fast myosin heavy chain 2X gene, complete cds Length = 24900 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 13577 caagaagaggaaactggaaga 13597
>gb|DQ227280.1| Canis familiaris fast myosin heavy chain 2A gene, complete cds Length = 25260 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 16085 caagaagaggaaactggaaga 16105
>gb|AC163713.3| Pan troglodytes BAC clone CH251-879F11 from chromosome y, complete sequence Length = 213839 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 464 tattaaatttgctgatgaaagacta 488 ||||||| ||||||||||||||||| Sbjct: 40020 tattaaacttgctgatgaaagacta 40044
>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence Length = 208154 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 agaggaaactggaagaagttgaagg 328 ||||||||| ||||||||||||||| Sbjct: 143308 agaggaaacaggaagaagttgaagg 143284
>ref|XM_878024.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 19 (MYH8), mRNA Length = 5948 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2835 caagaagaggaaactggaaga 2855
>ref|XM_877978.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 18 (MYH8), mRNA Length = 6032 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2919 caagaagaggaaactggaaga 2939
>ref|XM_877939.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 17 (MYH8), mRNA Length = 5990 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877896.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 16 (MYH8), mRNA Length = 5858 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2745 caagaagaggaaactggaaga 2765
>ref|XM_877852.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 15 (MYH8), mRNA Length = 5972 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2859 caagaagaggaaactggaaga 2879
>ref|XM_877815.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 14 (MYH8), mRNA Length = 5984 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2871 caagaagaggaaactggaaga 2891
>ref|XM_877771.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 13 (MYH8), mRNA Length = 5996 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2883 caagaagaggaaactggaaga 2903
>ref|XM_877729.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 12 (MYH8), mRNA Length = 5900 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877685.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 11 (MYH8), mRNA Length = 5903 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877640.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 10 (MYH8), mRNA Length = 5891 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877595.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 9 (MYH8), mRNA Length = 5681 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877546.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 8 (MYH8), mRNA Length = 4301 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 1188 caagaagaggaaactggaaga 1208
>ref|XM_877500.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 7 (MYH8), mRNA Length = 5201 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877451.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 6 (MYH8), mRNA Length = 5105 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877396.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 5 (MYH8), mRNA Length = 5741 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2712 caagaagaggaaactggaaga 2732
>ref|XM_877354.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 4 (MYH8), mRNA Length = 5840 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2886 caagaagaggaaactggaaga 2906
>ref|XM_865879.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 2 (MYH8), mRNA Length = 5996 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2883 caagaagaggaaactggaaga 2903
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 cagctgatgatgcagttgttagcaa 301 ||||||||| ||||||||||||||| Sbjct: 144189 cagctgatgctgcagttgttagcaa 144165
>ref|XM_856140.1| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 3 (MYH1), mRNA Length = 5594 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2496 caagaagaggaaactggaaga 2516
>ref|XM_856112.1| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 2 (MYH1), mRNA Length = 5581 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2487 caagaagaggaaactggaaga 2507
>ref|XM_546622.2| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 1 (MYH1), mRNA Length = 5994 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2890 caagaagaggaaactggaaga 2910
>gb|AC068777.19| Homo sapiens 3 BAC RP11-278D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94170 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 aacttcagagacctcagataa 28 ||||||||||||||||||||| Sbjct: 85231 aacttcagagacctcagataa 85251
>gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete sequence Length = 86223 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 868 ctcagtgagacgtaccatttt 888 ||||||||||||||||||||| Sbjct: 52698 ctcagtgagacgtaccatttt 52718
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 464 tattaaatttgctgatgaaagacta 488 ||||||| ||||||||||||||||| Sbjct: 71037 tattaaacttgctgatgaaagacta 71013
>gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones RPCI-11-463J17 and RPCI-6-92G13RCB2, complete sequence Length = 245708 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aagattcagctcccaaatcag 222 ||||||||||||||||||||| Sbjct: 94289 aagattcagctcccaaatcag 94309 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aagattcagctcccaaatcag 222 ||||||||||||||||||||| Sbjct: 94357 aagattcagctcccaaatcag 94377
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 agaggaaactggaagaagttgaagg 328 ||||||||| ||||||||||||||| Sbjct: 17546 agaggaaacaggaagaagttgaagg 17522
>dbj|AB017819.1| Theragra chalcogramma mRNA for myosin heavy chain, partial cds Length = 3923 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caagaagaggaaactggaaga 319 ||||||||||||||||||||| Sbjct: 2880 caagaagaggaaactggaaga 2900 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 186,617,647 Number of extensions: 10545970 Number of successful extensions: 207120 Number of sequences better than 10.0: 70 Number of HSP's gapped: 207114 Number of HSP's successfully gapped: 86 Length of query: 946 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 923 Effective length of database: 18,503,978,556 Effective search space: 17079172207188 Effective search space used: 17079172207188 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)