| Clone Name | FLbaf123o01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR855152.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0099L20, complete sequence Length = 82575 Score = 242 bits (122), Expect = 7e-60 Identities = 173/190 (91%) Strand = Plus / Plus Query: 170 cgaagcccgaggaggtggccgcttaccagagcagcgaggccaagcaggcgaggctgcagt 229 ||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 28373 cgaagccggaggaggtcgcggcttaccagagcagcgaggccaagcaggcgaagctacagt 28432 Query: 230 ccatgctcgcggcgctcctcgacgaccccatactcgccgacgtcccgaggaagccctcgc 289 |||||||||| || ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 28433 ccatgctcgccgccctcctcgacgaccccatactcgccgacgtgcccaggaagccctccc 28492 Query: 290 tggcggacgtggacacgctcatcaacctcgagctcggcagcgccatgagggtgaccgtcg 349 | || ||||| |||||||| ||||||||||||||||||||||||||| || | ||||||| Sbjct: 28493 tcgccgacgtcgacacgctgatcaacctcgagctcggcagcgccatgcggctaaccgtcg 28552 Query: 350 tcaagctgga 359 |||||||||| Sbjct: 28553 tcaagctgga 28562 Score = 135 bits (68), Expect = 1e-27 Identities = 101/112 (90%) Strand = Plus / Plus Query: 2299 tttgtcccaggaagcatatttgggagaactactgcctgacacatcaaagtgagaagttga 2358 ||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| Sbjct: 30292 tttgttccaggaagcatatttgggataactactgtctgacacatcaaaatgagaagttga 30351 Query: 2359 tagatgacaattctgcactttcttcttatgacattcgtaataactccaaggt 2410 ||||||||||||| | ||||| ||| ||| |||| |||||||||||||||| Sbjct: 30352 tagatgacaattccgtgctttcgtctaatggcatttgtaataactccaaggt 30403 Score = 65.9 bits (33), Expect = 8e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 383 tgttgaacactgctacgctcaaggatttgaagctggctgtcaggaagaaaataactgaga 442 |||||||||| || || |||||||||||||| ||||| |||||||||| | ||||| Sbjct: 28697 tgttgaacacagccactgtcaaggatttgaagatggctatcaggaagaagacggatgaga 28756 Query: 443 tagagcagggccagatgggccatcgtcacatctcatggtaa 483 | || |||| |||||||||||||||| |||||||||||| Sbjct: 28757 ttgaacaggaaaagatgggccatcgtcatatctcatggtaa 28797 Score = 63.9 bits (32), Expect = 3e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 2701 ctaggtttgtttctcaccacacgtcatgtcgagagtacatcagaagcattccaggagaag 2760 |||||||| |||||| || ||||| ||||| || ||| ||| ||||| || || ||||| Sbjct: 30721 ctaggtttatttctcgccgcacgttatgtccagggtatatcgaaagcactcaagaagaag 30780 Query: 2761 aaaacaccgtttcttccacggtcttagcaggaagatgtgatccc 2804 ||||||||| || ||||| ||||||| ||||| |||||||||| Sbjct: 30781 aaaacaccgctttttccatggtcttaataggaaaatgtgatccc 30824
>ref|NM_001060700.1| Oryza sativa (japonica cultivar-group) Os04g0663500 (Os04g0663500) mRNA, complete cds Length = 453 Score = 242 bits (122), Expect = 7e-60 Identities = 173/190 (91%) Strand = Plus / Plus Query: 170 cgaagcccgaggaggtggccgcttaccagagcagcgaggccaagcaggcgaggctgcagt 229 ||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 59 cgaagccggaggaggttgcggcttaccagagcagcgaggccaagcaggcgaagctacagt 118 Query: 230 ccatgctcgcggcgctcctcgacgaccccatactcgccgacgtcccgaggaagccctcgc 289 |||||||||| || ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 119 ccatgctcgccgccctcctcgacgaccccatactcgccgacgtgcccaggaagccctccc 178 Query: 290 tggcggacgtggacacgctcatcaacctcgagctcggcagcgccatgagggtgaccgtcg 349 | || ||||| |||||||| ||||||||||||||||||||||||||| || | ||||||| Sbjct: 179 tcgccgacgtcgacacgctgatcaacctcgagctcggcagcgccatgcggctaaccgtcg 238 Query: 350 tcaagctgga 359 |||||||||| Sbjct: 239 tcaagctgga 248 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Plus Query: 2308 ggaagcatatttgggagaactactgcctgacacatcaaagtgagaagttgatagatgaca 2367 |||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 347 ggaagcatatttgggataactactgtctgacacatcaaaatgagaagttgatagatgaca 406 Query: 2368 attctgcactttcttcttatgacattcgtaataactccaag 2408 |||| | ||||| ||| ||| |||| |||||||||||||| Sbjct: 407 attccgtgctttcgtctaatggcatttgtaataactccaag 447 Score = 56.0 bits (28), Expect = 8e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 401 tcaaggatttgaagctggctgtcaggaagaaaataactgagatagagcagggccagatgg 460 |||||||||||||| ||||| |||||||||| | |||||| || |||| |||||| Sbjct: 269 tcaaggatttgaagatggctatcaggaagaagacggatgagattgaacaggaaaagatgg 328 Query: 461 gccatcgtcacatctcatgg 480 |||||||||| ||||||||| Sbjct: 329 gccatcgtcatatctcatgg 348
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 242 bits (122), Expect = 7e-60 Identities = 173/190 (91%) Strand = Plus / Plus Query: 170 cgaagcccgaggaggtggccgcttaccagagcagcgaggccaagcaggcgaggctgcagt 229 ||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 33890588 cgaagccggaggaggttgcggcttaccagagcagcgaggccaagcaggcgaagctacagt 33890647 Query: 230 ccatgctcgcggcgctcctcgacgaccccatactcgccgacgtcccgaggaagccctcgc 289 |||||||||| || ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 33890648 ccatgctcgccgccctcctcgacgaccccatactcgccgacgtgcccaggaagccctccc 33890707 Query: 290 tggcggacgtggacacgctcatcaacctcgagctcggcagcgccatgagggtgaccgtcg 349 | || ||||| |||||||| ||||||||||||||||||||||||||| || | ||||||| Sbjct: 33890708 tcgccgacgtcgacacgctgatcaacctcgagctcggcagcgccatgcggctaaccgtcg 33890767 Query: 350 tcaagctgga 359 |||||||||| Sbjct: 33890768 tcaagctgga 33890777 Score = 135 bits (68), Expect = 1e-27 Identities = 101/112 (90%) Strand = Plus / Plus Query: 2299 tttgtcccaggaagcatatttgggagaactactgcctgacacatcaaagtgagaagttga 2358 ||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| Sbjct: 33892342 tttgttccaggaagcatatttgggataactactgtctgacacatcaaaatgagaagttga 33892401 Query: 2359 tagatgacaattctgcactttcttcttatgacattcgtaataactccaaggt 2410 ||||||||||||| | ||||| ||| ||| |||| |||||||||||||||| Sbjct: 33892402 tagatgacaattccgtgctttcgtctaatggcatttgtaataactccaaggt 33892453 Score = 65.9 bits (33), Expect = 8e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 383 tgttgaacactgctacgctcaaggatttgaagctggctgtcaggaagaaaataactgaga 442 |||||||||| || || |||||||||||||| ||||| |||||||||| | ||||| Sbjct: 33890912 tgttgaacacagccactgtcaaggatttgaagatggctatcaggaagaagacggatgaga 33890971 Query: 443 tagagcagggccagatgggccatcgtcacatctcatggtaa 483 | || |||| |||||||||||||||| |||||||||||| Sbjct: 33890972 ttgaacaggaaaagatgggccatcgtcatatctcatggtaa 33891012 Score = 56.0 bits (28), Expect = 8e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 2701 ctaggtttgtttctcaccacacgtcatgtcgagagtacatcagaagcattccaggagaag 2760 |||||||| |||||| || ||||| ||||| || ||| ||| ||||| || || ||||| Sbjct: 33892771 ctaggtttatttctcgccgcacgttatgtccagggtatatcgaaagcactcaagaagaag 33892830 Query: 2761 aaaacaccgtttcttccacggtcttagcaggaagatgtgatccc 2804 ||||||||| || ||||| |||||| ||||| |||||||||| Sbjct: 33892831 aaaacaccgctttttccatggtcttcataggaaaatgtgatccc 33892874 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagcacc 86 ||||||||||||||||||||| ||||||| Sbjct: 1984979 cgcccccgccgccgccgccgtggagcacc 1985007 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccg 74 |||||||||||||| |||||||||||| Sbjct: 6601 gcgccaccgtcgccgccgccgccgccg 6575 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 22368452 ccaccgtcgccgccgccgccgccgccg 22368478 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 gtcgcccccgccgccgccgccg 77 |||||||||||||||||||||| Sbjct: 9485304 gtcgcccccgccgccgccgccg 9485325 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgtcgcccccgccgccgccgcc 76 |||||||||||||||||||||| Sbjct: 19016342 cgtcgcccccgccgccgccgcc 19016321 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccg 74 |||||||||||||||||||||| Sbjct: 26014622 accgtcgcccccgccgccgccg 26014601
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 242 bits (122), Expect = 7e-60 Identities = 173/190 (91%) Strand = Plus / Plus Query: 170 cgaagcccgaggaggtggccgcttaccagagcagcgaggccaagcaggcgaggctgcagt 229 ||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 102487 cgaagccggaggaggttgcggcttaccagagcagcgaggccaagcaggcgaagctacagt 102546 Query: 230 ccatgctcgcggcgctcctcgacgaccccatactcgccgacgtcccgaggaagccctcgc 289 |||||||||| || ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 102547 ccatgctcgccgccctcctcgacgaccccatactcgccgacgtgcccaggaagccctccc 102606 Query: 290 tggcggacgtggacacgctcatcaacctcgagctcggcagcgccatgagggtgaccgtcg 349 | || ||||| |||||||| ||||||||||||||||||||||||||| || | ||||||| Sbjct: 102607 tcgccgacgtcgacacgctgatcaacctcgagctcggcagcgccatgcggctaaccgtcg 102666 Query: 350 tcaagctgga 359 |||||||||| Sbjct: 102667 tcaagctgga 102676 Score = 135 bits (68), Expect = 1e-27 Identities = 101/112 (90%) Strand = Plus / Plus Query: 2299 tttgtcccaggaagcatatttgggagaactactgcctgacacatcaaagtgagaagttga 2358 ||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| Sbjct: 104241 tttgttccaggaagcatatttgggataactactgtctgacacatcaaaatgagaagttga 104300 Query: 2359 tagatgacaattctgcactttcttcttatgacattcgtaataactccaaggt 2410 ||||||||||||| | ||||| ||| ||| |||| |||||||||||||||| Sbjct: 104301 tagatgacaattccgtgctttcgtctaatggcatttgtaataactccaaggt 104352 Score = 65.9 bits (33), Expect = 8e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 383 tgttgaacactgctacgctcaaggatttgaagctggctgtcaggaagaaaataactgaga 442 |||||||||| || || |||||||||||||| ||||| |||||||||| | ||||| Sbjct: 102811 tgttgaacacagccactgtcaaggatttgaagatggctatcaggaagaagacggatgaga 102870 Query: 443 tagagcagggccagatgggccatcgtcacatctcatggtaa 483 | || |||| |||||||||||||||| |||||||||||| Sbjct: 102871 ttgaacaggaaaagatgggccatcgtcatatctcatggtaa 102911 Score = 56.0 bits (28), Expect = 8e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 2701 ctaggtttgtttctcaccacacgtcatgtcgagagtacatcagaagcattccaggagaag 2760 |||||||| |||||| || ||||| ||||| || ||| ||| ||||| || || ||||| Sbjct: 104670 ctaggtttatttctcgccgcacgttatgtccagggtatatcgaaagcactcaagaagaag 104729 Query: 2761 aaaacaccgtttcttccacggtcttagcaggaagatgtgatccc 2804 ||||||||| || ||||| |||||| ||||| |||||||||| Sbjct: 104730 aaaacaccgctttttccatggtcttcataggaaaatgtgatccc 104773
>gb|AY111504.1| Zea mays CL33392_1 mRNA sequence Length = 615 Score = 93.7 bits (47), Expect = 4e-15 Identities = 80/91 (87%) Strand = Plus / Minus Query: 2703 aggtttgtttctcaccacacgtcatgtcgagagtacatcagaagcattccaggagaagaa 2762 |||| |||||||| || ||||||||||| |||||||||| ||| || || || ||||||| Sbjct: 462 aggtctgtttctcgccgcacgtcatgtccagagtacatcggaaacactcaagaagaagaa 403 Query: 2763 aacaccgtttcttccacggtcttagcaggaa 2793 ||||||| |||||||| |||||||||||||| Sbjct: 402 aacaccgcttcttccatggtcttagcaggaa 372 Score = 93.7 bits (47), Expect = 4e-15 Identities = 89/103 (86%) Strand = Plus / Minus Query: 2308 ggaagcatatttgggagaactactgcctgacacatcaaagtgagaagttgatagatgaca 2367 |||||||| | ||||| ||||||||| |||||||||| | ||||||||||||||| |||| Sbjct: 561 ggaagcatgtctgggataactactgcttgacacatcacaatgagaagttgatagaggaca 502 Query: 2368 attctgcactttcttcttatgacattcgtaataactccaaggt 2410 |||| | ||||||||||||| | |||| |||||||| ||||| Sbjct: 501 attcaacgctttcttcttatggcgttcggaataactctaaggt 459
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 71.9 bits (36), Expect = 1e-08 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1938 attcgtatctagacaaatctaagacgagtaatttgg 1973 |||||||||||||||||||||||||||||||||||| Sbjct: 93106 attcgtatctagacaaatctaagacgagtaatttgg 93141
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1920 cattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacgga 1979 |||||||||| || |||| | |||||||||||||||||||||| ||||||| || ||||| Sbjct: 179891 cattttagtgctagatacctccgtatctagacaaatctaagacaagtaattcggaacgga 179950 Query: 1980 gg 1981 || Sbjct: 179951 gg 179952 Score = 63.9 bits (32), Expect = 3e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 1919 acattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacgg 1978 |||||||||||||| |||||| |||||||| |||||| |||||| || | ||||||| || Sbjct: 84354 acattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 84413 Query: 1979 aggtaata 1986 ||| |||| Sbjct: 84414 agggaata 84421 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1920 cattttagtgttatatacattcgtatctagacaaatctaagac 1962 |||||||||| || |||| ||||||||||||||||| |||||| Sbjct: 179843 cattttagtgctagataccttcgtatctagacaaatttaagac 179885 Score = 48.1 bits (24), Expect = 0.20 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgg 1973 |||||| |||||||||||||||| || || |||||||||| Sbjct: 179835 atacatccgtatctagacaaatccaaaacaagtaatttgg 179796 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgtctgagattt 1910 ||||||||||||| | ||||||||||||| |||||| Sbjct: 179958 atactccctccgttccgaattacttgtcttagattt 179923 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1876 tactccctccgtccggaattacttgt 1901 |||||||||||||||||| ||||||| Sbjct: 203622 tactccctccgtccggaaatacttgt 203647
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 65.9 bits (33), Expect = 8e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 1922 ttttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||||||| | |||||| |||||| ||||||||||||| || | ||||||||||||| Sbjct: 1122 ttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacggagg 1181 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| ||||| |||||||||||| ||| || | ||||||||||||| Sbjct: 1112 atacatccgtatttagacaaatctatgacaagaattttgggacggagg 1065
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 63.9 bits (32), Expect = 3e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 1922 ttttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||| ||| |||||| ||||||||||| |||||||||| || | ||||||||||||| Sbjct: 236201 ttttagtattagatacatccgtatctagacgaatctaagacaagaattttgggacggagg 236142 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| ||| | |||||||||||||||| || | ||||||||||||| Sbjct: 236211 atacatccgtttttagacaaatctaagacaagaattttgggacggagg 236258
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 63.9 bits (32), Expect = 3e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 1922 ttttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||| ||| |||||| |||||||||||||||||||||| || | |||||||| |||| Sbjct: 7319 ttttagtattagatacatccgtatctagacaaatctaagacaagaattttgggaccgagg 7260 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| ||||| ||||||| |||||||| || | ||||||||||||| Sbjct: 7329 atacatccgtatttagacaattctaagacaagaattttgggacggagg 7376
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 63.9 bits (32), Expect = 3e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| |||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 190977 atacatccgtatctagacaaatccaagacaagtaatttggaacggagg 190930 Score = 60.0 bits (30), Expect = 5e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1920 cattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacgga 1979 |||||||||| || ||| | |||||||||||||||||||||| ||||||| || ||||| Sbjct: 190985 cattttagtgctagatatctccgtatctagacaaatctaagacaagtaattcggaacgga 191044 Query: 1980 gg 1981 || Sbjct: 191045 gg 191046 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtctgagattt 1910 |||||||||||| | ||||||||||||| |||||| Sbjct: 191051 tactccctccgttccgaattacttgtcttagattt 191017
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 1916 gacacattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttggga 1975 ||||| ||||||||||| ||| | ||||||||||||||| ||||| | |||||| ||| Sbjct: 67399 gacacgttttagtgttagatatctccgtatctagacaaatttaagataaataatttagga 67458 Query: 1976 cggaggtaata 1986 ||||||||||| Sbjct: 67459 cggaggtaata 67469
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 1916 gacacattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttggga 1975 ||||| ||||||||||| ||| | ||||||||||||||| ||||| | |||||| ||| Sbjct: 361 gacacgttttagtgttagatatctccgtatctagacaaatttaagataaataatttagga 420 Query: 1976 cggaggtaata 1986 ||||||||||| Sbjct: 421 cggaggtaata 431
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 1916 gacacattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttggga 1975 ||||| ||||||||||| ||| | ||||||||||||||| ||||| | |||||| ||| Sbjct: 361 gacacgttttagtgttagatatctccgtatctagacaaatttaagataaataatttagga 420 Query: 1976 cggaggtaata 1986 ||||||||||| Sbjct: 421 cggaggtaata 431
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 1916 gacacattttagtgttatatacattcgtatctagacaaatctaagacgagtaatttggga 1975 ||||| ||||||||||| ||| | ||||||||||||||| ||||| | |||||| ||| Sbjct: 361 gacacgttttagtgttagatatctccgtatctagacaaatttaagataaataatttagga 420 Query: 1976 cggaggtaata 1986 ||||||||||| Sbjct: 421 cggaggtaata 431
>gb|AY848951.1| Thinopyrum elongatum Na+/H+ antiporter (NHX1) mRNA, complete cds Length = 2024 Score = 58.0 bits (29), Expect = 2e-04 Identities = 38/40 (95%), Gaps = 2/40 (5%) Strand = Plus / Plus Query: 1942 gtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||||||||||||||||| |||||||||||||||||| Sbjct: 1945 gtatctagacaaatctaaga--agtaatttgggacggagg 1982
>gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) gene, complete cds Length = 4749 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%), Gaps = 5/65 (7%) Strand = Plus / Plus Query: 1922 ttttagtgttatatacattcgtatctagaca-----aatctaagacgagtaatttgggac 1976 ||||| ||||| |||||| |||||||||||| |||||||||| ||||||||||||| Sbjct: 807 ttttaatgttagatacatccgtatctagacaaatctaatctaagacaagtaatttgggac 866 Query: 1977 ggagg 1981 ||||| Sbjct: 867 ggagg 871 Score = 52.0 bits (26), Expect = 0.013 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1872 ataatactccctccgtccggaattacttgtctgagatt 1909 |||||||||||||||||| |||||||||||| ||||| Sbjct: 880 ataatactccctccgtcccaaattacttgtcttagatt 843
>gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds Length = 1489 Score = 56.0 bits (28), Expect = 8e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 1922 ttttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||| ||| |||||| ||||||||| |||||||||||| || | ||||| ||||||| Sbjct: 555 ttttagtattagatacatccgtatctaggcaaatctaagacaagaattttggaacggagg 496 Score = 56.0 bits (28), Expect = 8e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| ||||| |||||||||||||||| || | ||||||||||||| Sbjct: 565 atacatccgtatttagacaaatctaagacaagaattttgggacggagg 612
>gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds Length = 1536 Score = 56.0 bits (28), Expect = 8e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 1922 ttttagtgttatatacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||| ||| |||||| ||||||||| |||||||||||| || | ||||| ||||||| Sbjct: 604 ttttagtattagatacatccgtatctaggcaaatctaagacaagaattttggaacggagg 545 Score = 56.0 bits (28), Expect = 8e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| ||||| |||||||||||||||| || | ||||||||||||| Sbjct: 614 atacatccgtatttagacaaatctaagacaagaattttgggacggagg 661
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 56.0 bits (28), Expect = 8e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1875 atactccctccgtccggaattacttgtc 1902 |||||||||||||||||||||||||||| Sbjct: 52137 atactccctccgtccggaattacttgtc 52164
>gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q) gene, complete sequence Length = 3321 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1942 gtatctagacaaatctaagacgagtaatttgggacggagg 1981 ||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 2918 gtatctagacaaatcgaagacaagtaatttggaacggagg 2957 Score = 50.1 bits (25), Expect = 0.050 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatt 1970 |||||| ||||||||||||||| |||||| ||||||| Sbjct: 2888 atacatccgtatctagacaaatttaagacaagtaatt 2852
>emb|AJ704455.1| Hordeum vulgare partial eIF(iso)4E gene for putative eukaryotic translation initiation factor (iso)4E, exons 3-5, line OWB-D Length = 1412 Score = 56.0 bits (28), Expect = 8e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||||| ||||||||||||| |||||| || | ||||||||||||| Sbjct: 522 atacattcatatctagacaaatgtaagacaagaattttgggacggagg 475
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 56.0 bits (28), Expect = 8e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgtc 1902 |||||||||||||||||||||||||||| Sbjct: 11628 atactccctccgtccggaattacttgtc 11601
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 56.0 bits (28), Expect = 8e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgtc 1902 |||||||||||||||||||||||||||| Sbjct: 3300 atactccctccgtccggaattacttgtc 3273
>ref|XM_001224243.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05030) mRNA, complete cds Length = 873 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Minus Query: 50 gccaccgtcgcccccgccgccgccgccgttg 80 ||||||| ||||||||||||||||||||||| Sbjct: 570 gccaccgccgcccccgccgccgccgccgttg 540
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1872 ataatactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||||||| Sbjct: 37680 ataatactccctccgtccagaattacttgtc 37710
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1872 ataatactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||||||| Sbjct: 3980 ataatactccctccgtccagaattacttgtc 4010
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1868 ttatataatactccctccgtccggaattacttgtc 1902 |||| ||||||||||||||||||||| |||||||| Sbjct: 842 ttatgtaatactccctccgtccggaaatacttgtc 808
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.013 Identities = 38/42 (90%) Strand = Plus / Plus Query: 36 accccttctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 8960128 acccctcctccgacgccaccgtcgccgccgccgccgccgccg 8960169 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgccg 77 |||||||||||||||||||||||| Sbjct: 8924155 ccgtcgcccccgccgccgccgccg 8924132 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccgccgt 78 ||||||||| |||||||||||||||| Sbjct: 12853416 accgtcgccgccgccgccgccgccgt 12853391 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1864 tcaattatataatactccctccgtcc 1889 ||||||||||| |||||||||||||| Sbjct: 36266190 tcaattatatactactccctccgtcc 36266215 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccgttg 80 ||||||| |||||||||||||||||| Sbjct: 38884521 cgtcgccgccgccgccgccgccgttg 38884546
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 52.0 bits (26), Expect = 0.013 Identities = 38/42 (90%) Strand = Plus / Plus Query: 36 accccttctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 67883 acccctcctccgacgccaccgtcgccgccgccgccgccgccg 67924 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgccg 77 |||||||||||||||||||||||| Sbjct: 31910 ccgtcgcccccgccgccgccgccg 31887
>ref|NM_001058629.1| Oryza sativa (japonica cultivar-group) Os04g0131900 (Os04g0131900) mRNA, complete cds Length = 2363 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Minus Query: 58 cgcccccgccgccgccgccgttgagcacc 86 ||||||||||||||||||||| ||||||| Sbjct: 87 cgcccccgccgccgccgccgtggagcacc 59
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1874 aatactccctccgtccggaattacttgtc 1902 |||||||||||||||||||| |||||||| Sbjct: 69913 aatactccctccgtccggaagtacttgtc 69885 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1875 atactccctccgtccggaattacttgtc 1902 |||||||||||||||||||||| ||||| Sbjct: 69794 atactccctccgtccggaattatttgtc 69821
>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence Length = 176757 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccg 77 ||||||||||||| ||||||||||||||| Sbjct: 71050 cgccaccgtcgccaccgccgccgccgccg 71022
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagac 1962 |||||||||||| |||||||||||||||| Sbjct: 58551 atacattcgtatgtagacaaatctaagac 58579 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1918 cacattttagtgttatatacattcgtat 1945 ||||||||||||||| |||||||||||| Sbjct: 58545 cacattttagtgttagatacattcgtat 58518
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 50.1 bits (25), Expect = 0.050 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1875 atactccctccgtccggaattacttgtctgaga 1907 ||||||||||||||||||| |||||||| |||| Sbjct: 33623 atactccctccgtccggaaatacttgtcggaga 33655 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 ||||||||| ||||||||||||||||| Sbjct: 33740 tactccctctgtccggaattacttgtc 33714
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1874 aatactccctccgtccggaattacttgtc 1902 |||||||||||||||||||| |||||||| Sbjct: 1865 aatactccctccgtccggaagtacttgtc 1837 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1875 atactccctccgtccggaattacttgtc 1902 |||||||||||||||||||||| ||||| Sbjct: 1746 atactccctccgtccggaattatttgtc 1773
>dbj|AK064088.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-C05, full insert sequence Length = 2363 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Minus Query: 58 cgcccccgccgccgccgccgttgagcacc 86 ||||||||||||||||||||| ||||||| Sbjct: 87 cgcccccgccgccgccgccgtggagcacc 59
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06, complete sequence Length = 126447 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagcacc 86 ||||||||||||||||||||| ||||||| Sbjct: 1639 cgcccccgccgccgccgccgtggagcacc 1667
>emb|AL663011.2|OSJN00215 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0080H08, complete sequence Length = 138127 Score = 50.1 bits (25), Expect = 0.050 Identities = 28/29 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagcacc 86 ||||||||||||||||||||| ||||||| Sbjct: 128216 cgcccccgccgccgccgccgtggagcacc 128244
>gb|DQ245152.1| Zea mays clone 13367 mRNA sequence Length = 972 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 54 ccgtcgcccccgccgccgccgccgttga 81 |||||||||||||| ||||||||||||| Sbjct: 663 ccgtcgcccccgcccccgccgccgttga 690
>gb|EF028786.1| Triticum aestivum CBF4D-B22 mRNA, complete cds Length = 1252 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtctgaga 1907 ||||||||||||||| || ||||||||||||| Sbjct: 1087 tactccctccgtccgaaaatacttgtctgaga 1056 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1876 tactccctccgtccggaattacttgt 1901 ||||||||| |||||||||||||||| Sbjct: 972 tactccctctgtccggaattacttgt 997
>ref|NM_001054333.1| Oryza sativa (japonica cultivar-group) Os02g0692700 (Os02g0692700) mRNA, complete cds Length = 1319 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 646 gccaccgtcgccgccgccgccgccgccg 619
>ref|NM_001049193.1| Oryza sativa (japonica cultivar-group) Os01g0263500 (Os01g0263500) mRNA, complete cds Length = 1212 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgccg 77 |||||||||||||||||||||||| Sbjct: 76 ccgtcgcccccgccgccgccgccg 53
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||| | ||| |||||||||||||||| || | ||||||||||||| Sbjct: 30509 atacatccatatatagacaaatctaagacaagaattttgggacggagg 30462 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1869 tatataatactccctccgtccggaattacttgtc 1902 |||||| |||| ||||||||||||| |||||||| Sbjct: 9764 tatatattactacctccgtccggaaatacttgtc 9797
>gb|AY022797.1| Oryza sativa microsatellite MRG5122 containing (CGC)X8, closest to marker R3393, genomic sequence Length = 224 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 93 gccaccgtcgccgccgccgccgccgccg 120
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgcc 76 ||||||||||||| |||||||||||||| Sbjct: 109495 cgccaccgtcgccgccgccgccgccgcc 109522
>ref|XM_543783.2| PREDICTED: Canis familiaris similar to AE binding protein 2 (LOC486656), mRNA Length = 3918 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgttgagca 84 |||| ||| |||||||||||||||||||||| |||| Sbjct: 217 cgccgccgccgcccccgccgccgccgccgttcagca 182
>ref|XM_544230.2| PREDICTED: Canis familiaris similar to Deubiquitylating with USP/UBP and OTU domains family member (duo-1) (LOC487102), mRNA Length = 933 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Plus Query: 54 ccgtcgcccccgccgccgccgccg 77 |||||||||||||||||||||||| Sbjct: 68 ccgtcgcccccgccgccgccgccg 91
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Minus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggagg 1981 |||||||| |||||| ||||||||||||| | | ||||||||||||| Sbjct: 222842 atacattcatatctaaacaaatctaagacaataattttgggacggagg 222795
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Plus Query: 60 cccccgccgccgccgccgttgagc 83 |||||||||||||||||||||||| Sbjct: 10069486 cccccgccgccgccgccgttgagc 10069509 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 42 tctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||| |||||| |||| ||||||||||||||| Sbjct: 18962910 tctccagccccaccgccgccgccgccgccgccgccg 18962945 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 ||||||| ||||| |||||||||||||||| Sbjct: 15749421 cgccaccatcgccgccgccgccgccgccgt 15749392 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| ||| |||||||||||||||||||| Sbjct: 24991699 gcgccgccgccgcccccgccgccgccgccg 24991670 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||||||||||||| Sbjct: 25815505 ccaccgtcgccgccgccgccgccgcc 25815530
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgcc 76 ||||||||||||| |||||||||||||| Sbjct: 7253674 cgccaccgtcgccgccgccgccgccgcc 7253647 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1867 attatataatactccctccgtcc 1889 ||||||||||||||||||||||| Sbjct: 3896643 attatataatactccctccgtcc 3896665
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 28454245 gccaccgtcgccgccgccgccgccgccg 28454272 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccg 77 ||||||||||||||||||||||| Sbjct: 16188373 cgtcgcccccgccgccgccgccg 16188395 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||| |||||||||||||||||| Sbjct: 1056642 cgccgccgtcgtccccgccgccgccgccgt 1056613 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 ccagcgccaccgtcgcccccgccgccgccg 74 |||||||| |||||||| |||||||||||| Sbjct: 1186067 ccagcgccgccgtcgccgccgccgccgccg 1186096 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 33623792 cgccaccgccgccgccgccgccgccgccgt 33623763 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 33781081 cgccaccgccgccgccgccgccgccgccgt 33781052
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 78366 gccaccgtcgccgccgccgccgccgccg 78393
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 23086 gccaccgtcgccgccgccgccgccgccg 23113
>dbj|AK104818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A01, full insert sequence Length = 1305 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 644 gccaccgtcgccgccgccgccgccgccg 617
>dbj|AK066953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092A21, full insert sequence Length = 1321 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 50 gccaccgtcgcccccgccgccgccgccg 77 |||||||||||| ||||||||||||||| Sbjct: 648 gccaccgtcgccgccgccgccgccgccg 621
>ref|NM_008899.1| Mus musculus POU domain, class 3, transcription factor 2 (Pou3f2), mRNA Length = 1338 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccgt 78 ||||| |||| ||| ||||||||||||||||||||| Sbjct: 235 ctccaccgccgccgccgcccccgccgccgccgccgt 200
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgtc 1902 ||||||||||||||||||| |||||||| Sbjct: 10851 atactccctccgtccggaaatacttgtc 10824
>emb|AL772230.20| Mouse DNA sequence from clone RP23-381K3 on chromosome 4, complete sequence Length = 120564 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccgt 78 ||||| |||| ||| ||||||||||||||||||||| Sbjct: 110274 ctccaccgccgccgccgcccccgccgccgccgccgt 110309
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 60 cccccgccgccgccgccgttgagc 83 |||||||||||||||||||||||| Sbjct: 93135 cccccgccgccgccgccgttgagc 93112
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 42 tctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||| |||||| |||| ||||||||||||||| Sbjct: 7469 tctccagccccaccgccgccgccgccgccgccgccg 7434
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 42 tctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||| |||||| |||| ||||||||||||||| Sbjct: 59027 tctccagccccaccgccgccgccgccgccgccgccg 59062
>emb|X66602.1|MMPOU2 M.musculus brain-2 mRNA containing POU domain Length = 1654 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccgt 78 ||||| |||| ||| ||||||||||||||||||||| Sbjct: 402 ctccaccgccgccgccgcccccgccgccgccgccgt 367
>gb|M88300.1|MUSPOUDOMB Mouse brain-2 POU-domain protein, complete cds Length = 3864 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccgt 78 ||||| |||| ||| ||||||||||||||||||||| Sbjct: 2235 ctccaccgccgccgccgcccccgccgccgccgccgt 2200
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 46089 ccaccgtcgccgccgccgccgccgccg 46115
>gb|AC145290.3| Homo sapiens chromosome 8, clone WI2-85514F10, complete sequence Length = 46216 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2461 ggaactttttggtgtgcatagca 2483 ||||||||||||||||||||||| Sbjct: 28592 ggaactttttggtgtgcatagca 28570
>ref|NM_001069717.1| Oryza sativa (japonica cultivar-group) Os09g0416900 (Os09g0416900) mRNA, complete cds Length = 1467 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 139 ctccagcgccgccgccgccgccgccgccgccgccg 105
>ref|NM_001065753.1| Oryza sativa (japonica cultivar-group) Os07g0227700 (Os07g0227700) mRNA, complete cds Length = 2805 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Plus Query: 46 cagcgccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||| |||||||||||||| Sbjct: 68 cagcgccaccgccgccgccgccgccgccgcc 98
>ref|NM_001059466.1| Oryza sativa (japonica cultivar-group) Os04g0449400 (Os04g0449400) mRNA, complete cds Length = 1446 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 31 ccaccgtcgccgccgccgccgccgccg 5
>ref|XM_001142713.1| PREDICTED: Pan troglodytes thyroid transcription factor 1, transcript variant 2 (TITF1), mRNA Length = 2853 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Minus Query: 45 ccagcgccaccgtcgcccccgccgccgccgc 75 |||||||| ||| |||||||||||||||||| Sbjct: 1580 ccagcgcccccgccgcccccgccgccgccgc 1550
>ref|XM_001142566.1| PREDICTED: Pan troglodytes thyroid transcription factor 1, transcript variant 1 (TITF1), mRNA Length = 2701 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Minus Query: 45 ccagcgccaccgtcgcccccgccgccgccgc 75 |||||||| ||| |||||||||||||||||| Sbjct: 1428 ccagcgcccccgccgcccccgccgccgccgc 1398
>ref|XM_509911.2| PREDICTED: Pan troglodytes thyroid transcription factor 1, transcript variant 3 (TITF1), mRNA Length = 2192 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Minus Query: 45 ccagcgccaccgtcgcccccgccgccgccgc 75 |||||||| ||| |||||||||||||||||| Sbjct: 919 ccagcgcccccgccgcccccgccgccgccgc 889
>ref|XM_001135911.1| PREDICTED: Pan troglodytes ATP/GTP binding protein 1, transcript variant 1 (AGTPBP1), mRNA Length = 4385 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 34 ctccagcgccgccgccgccgccgccgccgccgccg 68
>ref|XM_001136417.1| PREDICTED: Pan troglodytes ATP/GTP binding protein 1, transcript variant 4 (AGTPBP1), mRNA Length = 4396 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 54 ctccagcgccgccgccgccgccgccgccgccgccg 88
>ref|XM_001136499.1| PREDICTED: Pan troglodytes ATP/GTP binding protein 1, transcript variant 5 (AGTPBP1), mRNA Length = 4516 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 54 ctccagcgccgccgccgccgccgccgccgccgccg 88
>ref|XM_001136238.1| PREDICTED: Pan troglodytes ATP/GTP binding protein 1, transcript variant 2 (AGTPBP1), mRNA Length = 4428 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 24 ctccagcgccgccgccgccgccgccgccgccgccg 58
>emb|CT737384.6| Pig DNA sequence from clone CH242-22E21 on chromosome 7, complete sequence Length = 173318 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgcc 76 ||||||||||||||||||||||| Sbjct: 1981 ccgtcgcccccgccgccgccgcc 1959
>ref|XM_001077690.1| PREDICTED: Rattus norvegicus hypothetical protein LOC687246 (LOC687246), mRNA Length = 2016 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||| ||||||||| |||| ||||||||||||||| Sbjct: 731 ctccggcgccaccgccgccgccgccgccgccgccg 765
>ref|XM_001059897.1| PREDICTED: Rattus norvegicus hypothetical protein LOC681008 (LOC681008), mRNA Length = 1998 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||| ||||||||| |||| ||||||||||||||| Sbjct: 713 ctccggcgccaccgccgccgccgccgccgccgccg 747
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||| |||||||||||||| Sbjct: 12616 tactccctccgttcggaattacttgtc 12642
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||| |||||||||||||| Sbjct: 8889 tactccctccgttcggaattacttgtc 8915
>ref|XR_010289.1| PREDICTED: Macaca mulatta similar to BTB (POZ) domain containing 7 isoform 2 (LOC696259), mRNA Length = 2584 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgcc 76 ||||||||||||||||||||||| Sbjct: 187 ccgtcgcccccgccgccgccgcc 165
>gb|AC185337.4| Nasonia vitripennis BAC NV_Bb-66L02 (Clemson University Genomics Nasonia vitripennis BAC Library) complete sequence Length = 128561 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 88534 ccaccgtcgccgccgccgccgccgccg 88508
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 agcgccaccgtcgcccccgccgc 69 ||||||||||||||||||||||| Sbjct: 1102339 agcgccaccgtcgcccccgccgc 1102317
>gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019D06 map S10616A, complete sequence Length = 182486 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1867 attatataatactccctccgtcc 1889 ||||||||||||||||||||||| Sbjct: 24269 attatataatactccctccgtcc 24291
>ref|XM_591818.2| PREDICTED: Bos taurus similar to cadherin 22 precursor (LOC540147), mRNA Length = 3394 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgttgagc 83 |||| |||||||| |||||||||||||| |||||| Sbjct: 2689 cgccgccgtcgccgccgccgccgccgcccttgagc 2655 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 tcgcccccgccgccgccgccgt 78 |||||||||||||||||||||| Sbjct: 2702 tcgcccccgccgccgccgccgt 2681
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 789 tactccctccgtccggaaatacttgtc 763
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 831 tactccctccgtccggaaatacttgtc 805
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 772 tactccctccgtccggaaatacttgtc 746
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 776 tactccctccgtccggaaatacttgtc 750
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 829 tactccctccgtccggaaatacttgtc 803
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 817 tactccctccgtccggaaatacttgtc 791
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 843 tactccctccgtccggaaatacttgtc 817
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 840 tactccctccgtccggaaatacttgtc 814
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 819 tactccctccgtccggaaatacttgtc 793
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 12013 ccaccgtcgccgccgccgccgccgccg 12039
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1876 tactccctccgtccggaattacttgtc 1902 |||||||||||||||||| |||||||| Sbjct: 93579 tactccctccgtccggaaatacttgtc 93553
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 37854 ccaccgtcgccgccgccgccgccgccg 37880
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence Length = 135294 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 453 ccagatgggccatcgtcacatct 475 ||||||||||||||||||||||| Sbjct: 108915 ccagatgggccatcgtcacatct 108893
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1868 ttatataatactccctccgtccg 1890 ||||||||||||||||||||||| Sbjct: 45410 ttatataatactccctccgtccg 45388
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05, complete sequence Length = 175061 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1868 ttatataatactccctccgtccg 1890 ||||||||||||||||||||||| Sbjct: 160471 ttatataatactccctccgtccg 160449
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1868 ttatataatactccctccgtccg 1890 ||||||||||||||||||||||| Sbjct: 3388626 ttatataatactccctccgtccg 3388604 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 |||||||||||||| |||| |||||||||| Sbjct: 14618033 gcgccaccgtcgccgccgctgccgccgccg 14618004
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 14883799 ctccagcgccgccgccgccgccgccgccgccgccg 14883765 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccgttga 81 |||||||||| |||||||||||||| |||| Sbjct: 16519305 caccgtcgccgccgccgccgccgcccttga 16519334
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Plus Query: 46 cagcgccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||| |||||||||||||| Sbjct: 7177772 cagcgccaccgccgccgccgccgccgccgcc 7177802 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagca 84 |||| |||||||||||||||||||||| Sbjct: 23002346 cgccgccgccgccgccgccgttgagca 23002372 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 16432558 cgccaccgtcgccgccgccgccgccg 16432533
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgc 75 ||||||||||||| ||||||||||||| Sbjct: 4158719 cgccaccgtcgccgccgccgccgccgc 4158745 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 27096767 gcgccaccgccgccgccgccgccgccgccg 27096796
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 27005431 ccaccgtcgccgccgccgccgccgccg 27005457 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 19580249 gcgccgccgtcgccgccgccgccgccgccg 19580278
>gb|AC134682.8| Homo sapiens chromosome 8, clone RP13-467H17, complete sequence Length = 54500 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2461 ggaactttttggtgtgcatagca 2483 ||||||||||||||||||||||| Sbjct: 15038 ggaactttttggtgtgcatagca 15016
>dbj|AP007295.1| Lotus japonicus genomic DNA, clone:LjT33A04, TM0130, complete sequence Length = 122684 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgcc 73 ||||||||||||||||||||||| Sbjct: 117597 ccaccgtcgcccccgccgccgcc 117619
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccg 74 |||||||||||||| |||||||||||| Sbjct: 6601 gcgccaccgtcgccgccgccgccgccg 6575
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1964 agtaatttgggacggaggtaata 1986 ||||||||||||||||||||||| Sbjct: 90489 agtaatttgggacggaggtaata 90511
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgc 75 ||||||||||||| ||||||||||||| Sbjct: 3940 cgccaccgtcgccgccgccgccgccgc 3966
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgc 75 ||||||||||||| ||||||||||||| Sbjct: 91978 cgccaccgtcgccgccgccgccgccgc 92004
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Plus Query: 46 cagcgccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||| |||||||||||||| Sbjct: 18256 cagcgccaccgccgccgccgccgccgccgcc 18286
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagca 84 |||| |||||||||||||||||||||| Sbjct: 77560 cgccgccgccgccgccgccgttgagca 77586
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 46.1 bits (23), Expect = 0.78 Identities = 32/35 (91%) Strand = Plus / Minus Query: 43 ctccagcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| ||| |||| ||||||||||||||| Sbjct: 92138 ctccagcgccgccgccgccgccgccgccgccgccg 92104
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487H05 Length = 176057 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccg 77 ||||||||||||||||||||||| Sbjct: 22860 cgtcgcccccgccgccgccgccg 22882
>dbj|AP005065.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0046H03 Length = 137020 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccg 77 ||||||||||||||||||||||| Sbjct: 80702 cgtcgcccccgccgccgccgccg 80724
>dbj|AK120258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A20, full insert sequence Length = 2805 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Plus Query: 46 cagcgccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||| |||||||||||||| Sbjct: 68 cagcgccaccgccgccgccgccgccgccgcc 98
>gb|AF512031.3| Choristoneura fumiferana MNPV polyhedrin, complete genome Length = 129593 Score = 46.1 bits (23), Expect = 0.78 Identities = 29/31 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgccg 77 |||||||||| |||| ||||||||||||||| Sbjct: 68504 agcgccaccgccgccgccgccgccgccgccg 68534
>emb|AJ459254.1|TAE459254 Triticum aestivum TAA1c gene for fatty acyl coA reductase Length = 2522 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgt 1901 ||||||||||||||||||| ||||||| Sbjct: 2264 atactccctccgtccggaaatacttgt 2238
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgccg 77 ||||||||||| ||||||||||||||| Sbjct: 119356 ccaccgtcgccgccgccgccgccgccg 119382
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 46.1 bits (23), Expect = 0.78 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1875 atactccctccgtccggaattacttgt 1901 ||||||||||||||||||| ||||||| Sbjct: 6089 atactccctccgtccggaactacttgt 6063
>dbj|AP005240.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-14P20, complete sequence Length = 98739 Score = 46.1 bits (23), Expect = 0.78 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3120 tgcttcatttatatttatttatt 3142 ||||||||||||||||||||||| Sbjct: 35328 tgcttcatttatatttatttatt 35306
>emb|CR855115.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148P16, complete sequence Length = 80434 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgtcgcccccgccgccgccgcc 76 |||||||||||||||||||||| Sbjct: 56368 cgtcgcccccgccgccgccgcc 56347
>dbj|AK243186.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100039D05, full insert sequence Length = 1532 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 953 cgccaccgccgccgccgccgccgccgccgt 924
>ref|NM_001073711.1| Oryza sativa (japonica cultivar-group) Os12g0594600 (Os12g0594600) mRNA, complete cds Length = 922 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| ||| |||||||||||||||||||| Sbjct: 125 gcgccgccgccgcccccgccgccgccgccg 96
>ref|NM_001069837.1| Oryza sativa (japonica cultivar-group) Os09g0445000 (Os09g0445000) mRNA, complete cds Length = 1037 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccgttga 81 |||||||||| |||||||||||||| |||| Sbjct: 235 caccgtcgccgccgccgccgccgcccttga 264
>ref|NM_001069836.1| Oryza sativa (japonica cultivar-group) Os09g0444900 (Os09g0444900) mRNA, complete cds Length = 1392 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 52 caccgtcgcccccgccgccgccgccgttga 81 |||||||||| |||||||||||||| |||| Sbjct: 938 caccgtcgccgccgccgccgccgcccttga 909
>ref|NM_001069013.1| Oryza sativa (japonica cultivar-group) Os08g0556700 (Os08g0556700) mRNA, partial cds Length = 4370 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 109 gcgccaccgccgccgccgccgccgccgccg 138
>ref|NM_001059867.1| Oryza sativa (japonica cultivar-group) Os04g0520000 (Os04g0520000) mRNA, complete cds Length = 1431 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 accgtcgcccccgccgccgccg 74 |||||||||||||||||||||| Sbjct: 266 accgtcgcccccgccgccgccg 287
>ref|NM_001058095.1| Oryza sativa (japonica cultivar-group) Os03g0797300 (Os03g0797300) mRNA, complete cds Length = 981 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagc 83 |||| ||||||||||||||||||||| Sbjct: 156 cgccgccgccgccgccgccgttgagc 181
>ref|NM_001057258.1| Oryza sativa (japonica cultivar-group) Os03g0636700 (Os03g0636700) mRNA, complete cds Length = 1344 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 255 cgccaccgccgcctccgccgccgccgccgt 226
>ref|NM_001055740.1| Oryza sativa (japonica cultivar-group) Os03g0186900 (Os03g0186900) mRNA, complete cds Length = 1742 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 109 cgccaccgtcgccgccgccgccgccg 134
>ref|NM_001052262.1| Oryza sativa (japonica cultivar-group) Os02g0122500 (Os02g0122500) mRNA, complete cds Length = 840 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 45 ccagcgccaccgtcgcccccgccgccgccg 74 |||||||| |||||||| |||||||||||| Sbjct: 184 ccagcgccgccgtcgccgccgccgccgccg 155
>ref|NM_001052241.1| Oryza sativa (japonica cultivar-group) Os02g0120100 (Os02g0120100) mRNA, complete cds Length = 2250 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||| |||||||||||||||||| Sbjct: 189 cgccgccgtcgtccccgccgccgccgccgt 218
>ref|NM_001051604.1| Oryza sativa (japonica cultivar-group) Os01g0894500 (Os01g0894500) mRNA, complete cds Length = 932 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccgttg 80 ||||||| |||||||||||||||||| Sbjct: 112 cgtcgccgccgccgccgccgccgttg 137
>ref|NM_001049466.1| Oryza sativa (japonica cultivar-group) Os01g0332100 (Os01g0332100) mRNA, complete cds Length = 2482 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccgccgt 78 ||||||||| |||||||||||||||| Sbjct: 298 accgtcgccgccgccgccgccgccgt 273
>ref|XR_019871.1| PREDICTED: Pan troglodytes similar to KTSR5831 (LOC736542), mRNA Length = 1011 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 150 caccgccgcccccgccgccgccgccg 175
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 4143337 cgcccccgccgccgccgccgtt 4143358
>ref|NM_057138.2| Rattus norvegicus CASP8 and FADD-like apoptosis regulator (Cflar), transcript variant 2, mRNA Length = 1734 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2513 atctctttatggacatttaccttttt 2538 ||||||||| |||||||||||||||| Sbjct: 1198 atctctttagggacatttaccttttt 1173
>ref|XM_975165.1| PREDICTED: Mus musculus hypothetical LOC628752 (LOC628752), mRNA Length = 960 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 |||||||||| |||| |||||||||||||| Sbjct: 442 agcgccaccgccgccgccgccgccgccgcc 471
>ref|XM_977463.1| PREDICTED: Mus musculus hypothetical protein LOC674843 (LOC674843), mRNA Length = 591 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 244 gcgccaccgccgccaccgccgccgccgccg 215
>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence Length = 114206 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1868 ttatataatactccctccgtcc 1889 |||||||||||||||||||||| Sbjct: 36749 ttatataatactccctccgtcc 36770
>ref|NM_013396.3| Homo sapiens ubiquitin specific peptidase 25 (USP25), mRNA Length = 4968 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 180 gcgccaccgccgccgccgccgccgccgccg 209
>gb|AY023178.1| Oryza sativa microsatellite MRG5503 containing (GCG)X8, closest to marker L655, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 131 gcgccaccgccgccgccgccgccgccgccg 102
>gb|AY022705.1| Oryza sativa microsatellite MRG5030 containing (CCG)X8, closest to marker G275, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 96 cgccaccgccgccgccgccgccgccgccgt 125
>gb|AY022682.1| Oryza sativa microsatellite MRG5007 containing (CCG)X8, closest to marker R662, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 95 gcgccaccgccgccgccgccgccgccgccg 124
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 40148 gcgccgccgtcgccgccgccgccgccgccg 40177
>ref|XM_676955.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8778.2), mRNA Length = 3135 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2232 tttctttttcaatatttccatt 2253 |||||||||||||||||||||| Sbjct: 765 tttctttttcaatatttccatt 786
>gb|AC111046.28| Mus musculus chromosome 10, clone RP23-479A12, complete sequence Length = 231134 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1202 gctgaagcttattttgtttttt 1223 |||||||||||||||||||||| Sbjct: 227346 gctgaagcttattttgtttttt 227325
>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence Length = 216489 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 179558 gcgccgccgtcgccgccgccgccgccgccg 179587
>ref|XM_543477.2| PREDICTED: Canis familiaris similar to Goliath homolog precursor (Ring finger protein 130) (R-goliath) (LOC486351), mRNA Length = 1140 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 gtcgcccccgccgccgccgccg 77 |||||||||||||||||||||| Sbjct: 30 gtcgcccccgccgccgccgccg 51
>gb|AC107234.8| Mus musculus chromosome 10, clone RP23-195B22, complete sequence Length = 218031 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1202 gctgaagcttattttgtttttt 1223 |||||||||||||||||||||| Sbjct: 175445 gctgaagcttattttgtttttt 175466
>gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosome 3, complete sequence Length = 162777 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 148276 gcgccaccgccgccaccgccgccgccgccg 148305
>ref|NM_168065.1| Drosophila melanogaster CG32260-RA (CG32260), mRNA Length = 1822 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 246 cgcccccgccgccgccgccgtt 267
>ref|XM_846306.1| PREDICTED: Canis familiaris similar to Cytohesin 3 (ARF nucleotide-binding site opener 3) (ARNO3 protein) (General receptor of phosphoinositides 1) (Grp1) (CLM-3) (LOC609100), mRNA Length = 1731 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 tcgcccccgccgccgccgccgt 78 |||||||||||||||||||||| Sbjct: 554 tcgcccccgccgccgccgccgt 533
>ref|XM_848955.1| PREDICTED: Canis familiaris similar to GTP-binding protein RAD (RAS associated with diabetes) (RAD1) (LOC611304), mRNA Length = 1275 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 31 cgcccccgccgccgccgccgtt 10
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 145430 cgccaccgccgcctccgccgccgccgccgt 145459
>gb|AY358206.1| Homo sapiens clone DNA142917 KTSR5831 (UNQ5831) mRNA, complete cds Length = 1399 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 266 caccgccgcccccgccgccgccgccg 291
>gb|BC075792.1| Homo sapiens ubiquitin specific peptidase 25, mRNA (cDNA clone MGC:87147 IMAGE:30346400), complete cds Length = 3984 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 333 gcgccaccgccgccgccgccgccgccgccg 362
>gb|BC015930.1| Homo sapiens ubiquitin specific peptidase 25, mRNA (cDNA clone IMAGE:3920963), complete cds Length = 1858 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 22 gcgccaccgccgccgccgccgccgccgccg 51
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 104371 caccgccgcccccgccgccgccgccg 104396
>ref|NM_001009340.1| Felis catus BCL2B-cell CLL/lymphoma 2 (BCL2), mRNA dbj|AB096611.1| Felis catus mRNA for bcl-2 protein, complete cds Length = 1423 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 gtcgcccccgccgccgccgccg 77 |||||||||||||||||||||| Sbjct: 718 gtcgcccccgccgccgccgccg 739
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ccccgccgccgccgccgttgag 82 |||||||||||||||||||||| Sbjct: 356663 ccccgccgccgccgccgttgag 356684
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgttgagc 83 |||| ||||||||||||||||||||| Sbjct: 83854 cgccgccgccgccgccgccgttgagc 83879
>ref|NM_007909.2| Mus musculus ephrin A2 (Efna2), mRNA dbj|AK140544.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930024I04 product:ephrin A2, full insert sequence Length = 1766 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 69 gcgccgccgtcgccgccgccgccgccgccg 98
>gb|AC125165.5| Mus musculus BAC clone RP24-429K13 from chromosome 16, complete sequence Length = 156815 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2211 ttttgtggcatctatcaaccat 2232 |||||||||||||||||||||| Sbjct: 87533 ttttgtggcatctatcaaccat 87554
>gb|AF244366.1| Rattus norvegicus FLIP short form mRNA, complete cds Length = 1501 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2513 atctctttatggacatttaccttttt 2538 ||||||||| |||||||||||||||| Sbjct: 988 atctctttagggacatttaccttttt 963
>gb|AC026357.27| Homo sapiens 12 BAC RP11-855O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88874 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1390 gctcagcatataaagaaattgc 1411 |||||||||||||||||||||| Sbjct: 88651 gctcagcatataaagaaattgc 88672
>gb|AC087311.23| Homo sapiens 12 BAC RP11-267D19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159688 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1390 gctcagcatataaagaaattgc 1411 |||||||||||||||||||||| Sbjct: 1781 gctcagcatataaagaaattgc 1802
>gb|AC107391.5| Homo sapiens BAC clone RP11-545D9 from 4, complete sequence Length = 103158 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2233 ttctttttcaatatttccattt 2254 |||||||||||||||||||||| Sbjct: 64172 ttctttttcaatatttccattt 64151
>gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174373 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 49661 cgcccccgccgccgccgccgtt 49682
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12, complete sequence Length = 149347 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 |||||||||||||| |||| |||||||||| Sbjct: 90495 gcgccaccgtcgccgccgctgccgccgccg 90466
>gb|AE012235.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 143 of 460 of the complete genome Length = 8650 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 |||||||||| ||||||||||||||| Sbjct: 650 caccgtcgccaccgccgccgccgccg 675
>tpg|BK000948.1| TPA_inf: Oryza sativa transposon Rim2-M337, complete sequence Length = 15178 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 4731 cgccaccgtcgccgccgccgccgccg 4706
>emb|X64775.1|OSSHRID O.sativa short highly repeated, interspersed DNA Length = 303 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 187 cgccaccgccgccgccgccgccgccgccgt 158
>dbj|AK082578.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230066A21 product:glycine receptor, beta subunit, full insert sequence Length = 2946 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 57 gcgccaccgccgccaccgccgccgccgccg 28
>gb|U15967.1|DMU15967 Drosophila melanogaster rfc40, Rop, and small GTP binding protein (Rop) genes, complete cds Length = 10223 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 10054 cgcccccgccgccgccgccgtt 10075
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 27860967 gcgccaccgccgccgccgccgccgccgccg 27860938
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 4523246 cgccaccgtcgccgccgccgccgccg 4523271 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 ||||||| ||||||| |||||||||||||| Sbjct: 14431608 agcgccaacgtcgccgccgccgccgccgcc 14431579 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 24152663 cgccaccgccgcctccgccgccgccgccgt 24152634 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1868 ttatataatactccctccgtcc 1889 |||||||||||||||||||||| Sbjct: 28706460 ttatataatactccctccgtcc 28706439 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 cgcccccgccgccgccgccgttgagc 83 |||| ||||||||||||||||||||| Sbjct: 32996831 cgccgccgccgccgccgccgttgagc 32996806
>gb|AC015989.11| Homo sapiens chromosome 18, clone RP11-215A20, complete sequence Length = 184092 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2171 catgttttcatccatttttcta 2192 |||||||||||||||||||||| Sbjct: 48477 catgttttcatccatttttcta 48498
>emb|AL162505.20| Human DNA sequence from clone RP11-327D19 on chromosome 20 Contains the 5' end of two variants of the CBFA2T2 gene for runt domain core-binding factor alpha subunit 2 and a CpG island, complete sequence Length = 77498 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 ccgtcgcccccgccgccgccgccgtt 79 |||||||| ||||||||||||||||| Sbjct: 36654 ccgtcgccgccgccgccgccgccgtt 36629
>dbj|D87952.2| Oryza sativa (japonica cultivar-group) gene for orthophosphate dikinase, complete cds Length = 11313 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 5441 gcgccgccgtcgccgccgccgccgccgccg 5412
>emb|AL136137.15| Human DNA sequence from clone RP11-377B2 on chromosome Xp11.23-11.4 Contains the 5' end of a novel gene (MGC51029), a novel gene and a ribosomal protein L19 (RPL19) pseudogene, complete sequence Length = 127140 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3123 ttcatttatatttatttattat 3144 |||||||||||||||||||||| Sbjct: 23236 ttcatttatatttatttattat 23215
>emb|AL031295.1|HS886K2 Human DNA sequence from clone RP5-886K2 on chromosome 1p35.1-36.12 Contains a neuronal thread protein (AD7C-NTP) pseudogene, the TCEB3 gene for transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A), two novel genes, a novel gene (HT014), the LYPLA2 gene for lysophospholipase II, the GALE gene for UDP-galactose-4-epimerase and the HMGCL gene for 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria), complete sequence Length = 124001 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1065 acagtgggcactcagtcactga 1086 |||||||||||||||||||||| Sbjct: 111219 acagtgggcactcagtcactga 111198
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgcc 73 ||||||||||||| |||||||||||| Sbjct: 198804 gcgccaccgtcgcgcccgccgccgcc 198779
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccgttg 80 ||||||| |||||||||||||||||| Sbjct: 157403 cgtcgccgccgccgccgccgccgttg 157428
>gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu 1 beta-amylase (Bmy1) gene, intron III Length = 1087 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 127 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 176
>gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva beta-amylase (Bmy1) gene, intron III Length = 1083 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 127 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 176
>gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 127 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 176
>gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainieris beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 127 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 176
>gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 127 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 176
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 caccgtcgcccccgccgccgccgccg 77 |||||||||| ||||||||||||||| Sbjct: 3463768 caccgtcgccaccgccgccgccgccg 3463743
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 gctcgcggcgctcctcgacgac 255 |||||||||||||||||||||| Sbjct: 3638640 gctcgcggcgctcctcgacgac 3638661
>ref|NM_014982.1| Homo sapiens pecanex homolog (Drosophila) (PCNX), mRNA gb|AF233450.1|AF233450 Homo sapiens pecanex-like protein 1 mRNA, complete cds Length = 7690 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||||| |||||||||||||||| Sbjct: 433 cgccgccgtcgccgccgccgccgccgccgt 404
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgtcgcccccgccgccgccgcc 76 |||||||||||||||||||||| Sbjct: 108267 cgtcgcccccgccgccgccgcc 108246
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 gtcgcccccgccgccgccgccg 77 |||||||||||||||||||||| Sbjct: 83422 gtcgcccccgccgccgccgccg 83443
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1864 tcaattatataatactccctccgtcc 1889 ||||||||||| |||||||||||||| Sbjct: 16067 tcaattatatactactccctccgtcc 16092
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1864 tcaattatataatactccctccgtcc 1889 ||||||||||| |||||||||||||| Sbjct: 143203 tcaattatatactactccctccgtcc 143228
>emb|AL808115.10| Mouse DNA sequence from clone RP23-224M8 on chromosome X, complete sequence Length = 163408 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 |||||||||| |||| |||||||||||||| Sbjct: 68160 agcgccaccgccgccgccgccgccgccgcc 68189
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 128423 cgccaccgtcgccgccgccgccgccg 128448
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 73349 cgccaccgtcgccgccgccgccgccg 73324
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 ||||||| ||||||| |||||||||||||| Sbjct: 104748 agcgccaacgtcgccgccgccgccgccgcc 104777
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||| |||||||||||||||||| Sbjct: 9166 cgccgccgtcgtccccgccgccgccgccgt 9137
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||| |||||||||||||||||| Sbjct: 45350 cgccgccgtcgtccccgccgccgccgccgt 45321
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1868 ttatataatactccctccgtcc 1889 |||||||||||||||||||||| Sbjct: 83760 ttatataatactccctccgtcc 83781
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccgccgt 78 ||||||||| |||||||||||||||| Sbjct: 133815 accgtcgccgccgccgccgccgccgt 133790
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccgccgt 78 ||||||||| |||||||||||||||| Sbjct: 4857 accgtcgccgccgccgccgccgccgt 4832
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 ccagcgccaccgtcgcccccgccgccgccg 74 |||||||| |||||||| |||||||||||| Sbjct: 17158 ccagcgccgccgtcgccgccgccgccgccg 17187
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 65577 gcgccaccgccgccgccgccgccgccgccg 65606
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccgttg 80 ||||||| |||||||||||||||||| Sbjct: 49307 cgtcgccgccgccgccgccgccgttg 49332
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccgttga 81 |||||||||| |||||||||||||| |||| Sbjct: 51530 caccgtcgccgccgccgccgccgcccttga 51559
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 138614 cgccaccgtcgccgccgccgccgccg 138589
>dbj|AB122090.1| Oryza sativa (japonica cultivar-group) Radc1 gene for Radc1, complete cds Length = 3000 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 1303 cgccaccgtcgccgccgccgccgccg 1328
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 111948 cgccaccgccgccgccgccgccgccgccgt 111919
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 94463 cgccaccgccgccgccgccgccgccgccgt 94434
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 69045 gcgccaccgccgccgccgccgccgccgccg 69016
>dbj|AK120720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G12, full insert sequence Length = 2483 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccgccgt 78 ||||||||| |||||||||||||||| Sbjct: 299 accgtcgccgccgccgccgccgccgt 274
>dbj|AK120050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A21, full insert sequence Length = 1693 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 98 cgccaccgtcgccgccgccgccgccg 123
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 44.1 bits (22), Expect = 3.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacgga 1979 |||||||| ||| ||||||||| |||||| || | ||||||||||| Sbjct: 46667 atacattcatatatagacaaatttaagacaagaattttgggacgga 46712
>gb|AC130449.2| Homo sapiens chromosome 16 clone CTA-233A7, complete sequence Length = 175104 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 111305 caccgccgcccccgccgccgccgccg 111280
>dbj|AK103704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136N12, full insert sequence Length = 2251 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||| |||||||||||||||||| Sbjct: 190 cgccgccgtcgtccccgccgccgccgccgt 219
>dbj|AK103300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C09, full insert sequence Length = 933 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 cgtcgcccccgccgccgccgccgttg 80 ||||||| |||||||||||||||||| Sbjct: 113 cgtcgccgccgccgccgccgccgttg 138
>dbj|AK102988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C14, full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 accgtcgcccccgccgccgccg 74 |||||||||||||||||||||| Sbjct: 267 accgtcgcccccgccgccgccg 288
>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene, complete cds Length = 5126 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1934 atacattcgtatctagacaaatctaagacgagtaatttgggacggaggta 1983 |||||||| |||||| ||||||||||||| || | |||| ||||||||| Sbjct: 2676 atacattcatatctaaacaaatctaagacaagaattttgaaacggaggta 2725
>dbj|AK101239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031N08, full insert sequence Length = 924 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| ||| |||||||||||||||||||| Sbjct: 127 gcgccgccgccgcccccgccgccgccgccg 98
>dbj|AK099902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114G10, full insert sequence Length = 4371 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 110 gcgccaccgccgccgccgccgccgccgccg 139
>dbj|AK073454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J02, full insert sequence Length = 3038 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 accgtcgcccccgccgccgccg 74 |||||||||||||||||||||| Sbjct: 1873 accgtcgcccccgccgccgccg 1894
>dbj|AK062232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D08, full insert sequence Length = 1742 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccg 74 ||||||||||||| |||||||||||| Sbjct: 109 cgccaccgtcgccgccgccgccgccg 134
>dbj|AK061210.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D03, full insert sequence Length = 1393 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 52 caccgtcgcccccgccgccgccgccgttga 81 |||||||||| |||||||||||||| |||| Sbjct: 939 caccgtcgccgccgccgccgccgcccttga 910
>ref|XM_893529.1| PREDICTED: Mus musculus hypothetical LOC628752 (LOC628752), mRNA Length = 960 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 |||||||||| |||| |||||||||||||| Sbjct: 442 agcgccaccgccgccgccgccgccgccgcc 471
>ref|XM_910304.1| PREDICTED: Mus musculus hypothetical LOC635286 (LOC635286), mRNA Length = 960 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 agcgccaccgtcgcccccgccgccgccgcc 76 |||||||||| |||| |||||||||||||| Sbjct: 442 agcgccaccgccgccgccgccgccgccgcc 471
>gb|AF170562.1|AF170562 Homo sapiens ubiquitin-specific processing protease (USP25) mRNA, complete cds Length = 5213 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 332 gcgccaccgccgccgccgccgccgccgccg 361
>gb|AF134213.1|AF134213 Homo sapiens ubiquitin-specific protease (USP21) mRNA, complete cds Length = 3803 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 162 gcgccaccgccgccgccgccgccgccgccg 191
>ref|NM_211458.1| Eremothecium gossypii AGL271Wp (AGL271W), mRNA Length = 3543 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgcc 73 ||||||||||||| |||||||||||| Sbjct: 1069 gcgccaccgtcgcgcccgccgccgcc 1044
>gb|AC004825.2|AC004825 Homo sapiens PAC clone RP1-292L20 from 14q24.3, complete sequence Length = 124221 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||| |||||||| |||||||||||||||| Sbjct: 64982 cgccgccgtcgccgccgccgccgccgccgt 65011
>emb|AJ340032.1|HSA340032 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IK4R Length = 767 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||||||||||||||| |||||||| Sbjct: 274 caccgtcgcccccgccgacgccgccg 299
>emb|AJ339946.1|HSA339946 Homo sapiens genomic sequence surrounding NotI site, clone NR5-FI10R Length = 745 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 274 caccgccgcccccgccgccgccgccg 299
>emb|AJ339843.1|HSA339843 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BF7R Length = 667 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 274 caccgccgcccccgccgccgccgccg 299
>emb|AJ339639.1|HSA339639 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BH15R Length = 715 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 ||||| |||||||||||||||||||| Sbjct: 274 caccgccgcccccgccgccgccgccg 299
>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 Length = 340000 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 54984 gcgccaccgccgccgccgccgccgccgccg 55013
>gb|AY109276.1| Zea mays PCO138516 mRNA sequence Length = 697 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 |||||||| |||| |||||||||||||||| Sbjct: 150 cgccaccgccgccaccgccgccgccgccgt 179
>gb|AY105795.1| Zea mays PCO084422 mRNA sequence Length = 1866 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 caccgtcgcccccgccgccgccgccg 77 |||||||||| ||||||||||||||| Sbjct: 450 caccgtcgccgccgccgccgccgccg 475
>ref|NM_001017194.2| Xenopus tropicalis ring finger protein 141 (rnf141), mRNA emb|CR760573.2| Xenopus tropicalis finished cDNA, clone TEgg040i09 Length = 2630 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| ||||| |||||||||||||| Sbjct: 483 gcgccaccgccgccctcgccgccgccgccg 454
>gb|BT001437.1| Drosophila melanogaster GH24648 full insert cDNA Length = 1066 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 cgcccccgccgccgccgccgtt 79 |||||||||||||||||||||| Sbjct: 590 cgcccccgccgccgccgccgtt 611
>gb|AC140422.2| Mus musculus BAC clone RP24-445D5 from 3, complete sequence Length = 172767 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||||||| |||| ||||||||||||||| Sbjct: 117598 gcgccaccgccgccaccgccgccgccgccg 117569
>gb|AC140229.3| Mus musculus BAC clone RP24-488O12 from 10, complete sequence Length = 156601 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 gcgccaccgtcgcccccgccgccgccgccg 77 ||||| |||||||| ||||||||||||||| Sbjct: 29707 gcgccgccgtcgccgccgccgccgccgccg 29736
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 accgtcgcccccgccgccgccg 74 |||||||||||||||||||||| Sbjct: 48949 accgtcgcccccgccgccgccg 48928
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ccaccgtcgcccccgccgccgccgcc 76 ||||||||||| |||||||||||||| Sbjct: 36956 ccaccgtcgccgccgccgccgccgcc 36981
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cgccaccgtcgcccccgccgccgccgccgt 78 ||||||| ||||| |||||||||||||||| Sbjct: 76234 cgccaccatcgccgccgccgccgccgccgt 76263 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 643,979,079 Number of extensions: 38234051 Number of successful extensions: 403585 Number of sequences better than 10.0: 258 Number of HSP's gapped: 403415 Number of HSP's successfully gapped: 326 Length of query: 3166 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3143 Effective length of database: 18,503,978,556 Effective search space: 58158004601508 Effective search space used: 58158004601508 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)