ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf123n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK122176:Os06g0729300 30 2.7
2AK111500:Os06g0729300 30 2.7
3Os03g0707200:Os03g0707200 29 3.6
4AK103279:Os02g0831600 29 4.6
5AB081951:Os02g0831600 29 4.6 
>AK122176:Os06g0729300 |
          Length = 1038
 Score = 29.6 bits (65), Expect = 2.7
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 377 TSGIPTPTDGGGTVGSVVQVAQEMFGTREEGQKPE*RQKGRKRSRNY 517
           T  +  P D GGTV SVVQ  QE +G   +       Q G ++  NY
Sbjct: 437 TRELTFPVDQGGTVKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNY 483
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>AK111500:Os06g0729300 |
          Length = 1038

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 377 TSGIPTPTDGGGTVGSVVQVAQEMFGTREEGQKPE*RQKGRKRSRNY 517
           T  +  P D GGTV SVVQ  QE +G   +       Q G ++  NY
Sbjct: 437 TRELTFPVDQGGTVKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNY 483
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>Os03g0707200:Os03g0707200 |
          Length = 454

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = +2

Query: 389 PTPTDGGGTVGSVVQVAQEMFGTREEGQKPE*RQKGRKRSRNYWGRAILIKLKSYYSPGR 568
           P P+DGG   G VV+  +E    R+E      + + R+R R  W R +    K+     R
Sbjct: 64  PGPSDGGEGNGRVVEEGEEEVVRRKE------QPRRRQRRRPVWRRILFASKKT-----R 112

Query: 569 DYALLSIISETVAGSLCVL 625
              +L+ ++   A  + VL
Sbjct: 113 SIIILNALTVIYASDIPVL 131
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>AK103279:Os02g0831600 |
          Length = 1011

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 377 TSGIPTPTDGGGTVGSVVQVAQEMFG 454
           T  +  P D GGTV SVVQ  QE +G
Sbjct: 409 TRELTFPVDEGGTVKSVVQYFQETYG 434
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>AB081951:Os02g0831600 |
          Length = 978

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 377 TSGIPTPTDGGGTVGSVVQVAQEMFG 454
           T  +  P D GGTV SVVQ  QE +G
Sbjct: 376 TRELTFPVDEGGTVKSVVQYFQETYG 401


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,812,473
Number of extensions: 555522
Number of successful extensions: 1468
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1465
Number of HSP's successfully gapped: 5
Length of query: 279
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 180
Effective length of database: 11,435,796
Effective search space: 2058443280
Effective search space used: 2058443280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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