| Clone Name | FLbaf123n07 |
|---|---|
| Clone Library Name | barley_pub |
>O15232:MATN3_HUMAN Matrilin-3 precursor - Homo sapiens (Human)| Length = 486 Score = 33.1 bits (74), Expect = 1.4 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = +2 Query: 176 TCQLRDLCPDGYYWC---CVGMGLPLPRCGCFSKISVGLTDHAISATKSSARKIDEEKQ- 343 TC +RD C G + C CV G C C+ ++ SAT+ + R + E Sbjct: 387 TCSVRDKCALGSHGCQHICVSDGAASYHCDCYPGYTLNEDKKTCSATEEARRLVSTEDAC 446 Query: 344 --TTPKSFQDQV 373 +FQD+V Sbjct: 447 GCEATLAFQDKV 458
>Q8BYZ1:ABI3_MOUSE ABI gene family member 3 - Mus musculus (Mouse)| Length = 367 Score = 31.6 bits (70), Expect = 4.1 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = +2 Query: 113 AGVIRLPSNGRVMAPPGYPTYT----CQLRDLCPDGYYWCCVGMGLPLPRCGCFSKISVG 280 A V+RLPSN +V+ P P+ T L C D + L R G S+ S+ Sbjct: 116 ATVVRLPSNQKVIPPESLPSLTPYHRKPLNFACLDDIGHGVKDLSTQLSRTGTLSRKSIK 175 Query: 281 LTDHAISATKSSARKIDEEKQ 343 +SAT +I E Q Sbjct: 176 APATPVSATLGRPPRIPEPVQ 196
>Q8WXR4:MYO3B_HUMAN Myosin-IIIB - Homo sapiens (Human)| Length = 1341 Score = 30.8 bits (68), Expect = 6.9 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -1 Query: 701 SEIQDITQDGPHTITKTECHRWSHRLAHTNSQR 603 +E+QD ++ G H + + HR SH A +N+ R Sbjct: 1145 AEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGR 1177
>Q07824:TPO1_YEAST Polyamine transporter 1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 586 Score = 30.4 bits (67), Expect = 9.1 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -3 Query: 405 PSVGVGIPEVITWSWKLFGVVCFSSSIFLA-ELFVAEIA*SVRPTLILLK 259 P +G I + TW W + V CF+S++F+A LF E + PT+++ K Sbjct: 288 PVMGSYIAQRTTWRWLEYVVGCFASAVFVAIVLFFEE---THHPTILVNK 334
>Q2FT32:RS17_METHJ 30S ribosomal protein S17P - Methanospirillum hungatei (strain JF-1| / DSM 864) Length = 108 Score = 30.4 bits (67), Expect = 9.1 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = -1 Query: 800 DFLHFIRLLLYTRYKTQVTELYCNSHAAKHKIVSEIQDITQDGPHTITKT 651 D+LHF+R Y RY+ + ++++ ++ H V ++ I + P + TKT Sbjct: 52 DYLHFVRK--YQRYEKRSSKIHAHNPPCLHARVGDMVSIAECRPLSKTKT 99
>Q63ZP1:PHF10_XENLA PHD finger protein 10 - Xenopus laevis (African clawed frog)| Length = 417 Score = 30.4 bits (67), Expect = 9.1 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = +2 Query: 191 DLCPDGYYWCCVGMG-LPLPR--CGCFSKISVGLTDHAISATKSSARKIDEEKQ 343 D C GY+ CVG+G LP R C C K+ + K ARK+ K+ Sbjct: 371 DTCDRGYHTFCVGLGALPSGRWICDCCQKVP--------ATPKKGARKVKNSKE 416 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 142,141,399 Number of extensions: 3134215 Number of successful extensions: 7574 Number of sequences better than 10.0: 6 Number of HSP's gapped: 7571 Number of HSP's successfully gapped: 6 Length of query: 279 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 167 Effective length of database: 69,965,399 Effective search space: 11684221633 Effective search space used: 11684221633 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)