ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf118m19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001065615.1| Oryza sativa (japonica cultivar-group) Os07g... 357 5e-95
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-30
3dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-30
4dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-30
5ref|NM_111841.3| Arabidopsis thaliana FK506 binding / peptidyl-p... 76 3e-10
6gb|AY122895.1| Arabidopsis thaliana AT3g10060/T22K18_11 mRNA, co... 76 3e-10
7gb|AY094442.1| Arabidopsis thaliana AT3g10060/T22K18_11 mRNA, co... 76 3e-10
8emb|BX826048.1|CNS0A54Y Arabidopsis thaliana Full-length cDNA Co... 70 2e-08
9emb|BX511113.8| Zebrafish DNA sequence from clone DKEY-38J10 in ... 48 0.061
10gb|AY855287.1| Bluetongue virus 2 isolate OnaB NS2 protein (S8) ... 44 0.95
11gb|AC116424.1| Homo sapiens 3 BAC RP11-265F19 (Roswell Park Canc... 44 0.95
12gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, comple... 44 0.95
13dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.95
14emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 44 0.95
15gb|L08673.1|BTVS2A Bluetongue virus mRNA sequence 44 0.95
16emb|CR855240.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 3.8
17ref|NM_001060082.1| Oryza sativa (japonica cultivar-group) Os04g... 42 3.8
18gb|AC095876.6| Rattus norvegicus BAC CH230-10G12 (Children's Ho... 42 3.8
19ref|XM_969655.1| PREDICTED: Tribolium castaneum similar to CG903... 42 3.8
20gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 42 3.8
21gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC... 42 3.8
22gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, com... 42 3.8
23gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 42 3.8
24gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome... 42 3.8
25gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com... 42 3.8
26gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple... 42 3.8
27emb|CR382322.5| Zebrafish DNA sequence from clone DKEY-29D11 in ... 42 3.8
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
29ref|XM_690902.1| PREDICTED: Danio rerio similar to tubulin, beta... 42 3.8
30emb|AL162391.15| Human DNA sequence from clone RP11-438L3 on chr... 42 3.8
31emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on ch... 42 3.8
32emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 42 3.8
33gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete... 42 3.8
34emb|BX296526.5| Zebrafish DNA sequence from clone DKEY-229D2 in ... 42 3.8
35gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, comp... 42 3.8
36gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1... 42 3.8
37gb|AY884005.1| Citrus sudden death-associated virus, complete ge... 42 3.8
38emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 42 3.8
39dbj|AB025574.1| Homo sapiens DNA, satellite sequence near the po... 42 3.8 
>ref|NM_001065615.1| Oryza sativa (japonica cultivar-group) Os07g0188200 (Os07g0188200)
           mRNA, complete cds
          Length = 1659
 Score =  357 bits (180), Expect = 5e-95
 Identities = 243/264 (92%)
 Strand = Plus / Plus

                                                                       
Query: 423 gttaagggatcgcgcgtcgcggtacattacgtggccaagtggaagggcataacattcatg 482
           ||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 412 gttaagggatcccgtgtcgcagtacattatgtggccaagtggaagggcataacattcatg 471

                                                                       
Query: 483 acaagcaggcagggcctcggtgtcactggtggaacgccatatgggtttgatgttggcaat 542
           |||||||||||||| ||||||||   ||| ||||||||||||||||||||| ||||||||
Sbjct: 472 acaagcaggcagggtctcggtgttggtggcggaacgccatatgggtttgatattggcaat 531

                                                                       
Query: 543 tctgaaagaggcaatgttctaaaaggattggatctcggggttgagggaatgaaagttggt 602
           ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 532 tctgaaagaggcaatgttctaaagggattggatcttggggttgagggaatgaaggttgga 591

                                                                       
Query: 603 ggccagaggttggtcattgttcctccggagctagcttatggaaaaaagggcgttcaggaa 662
           |||||||||||| |||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 592 ggccagaggttgatcatagttcctcctgagctggcttatgggaagaagggcgttcaggaa 651

                                   
Query: 663 attcctcctaatgcaactattgag 686
           |||||||| |||||||||||||||
Sbjct: 652 attcctccaaatgcaactattgag 675



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 341 caagattccggagagcgacttcaccactctgcctaatggc 380
           |||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 243 caagattccggagagcgagttcaccaccctgcccaatggc 282
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  141 bits (71), Expect = 5e-30
 Identities = 86/91 (94%)
 Strand = Plus / Plus

                                                                           
Query: 518     gccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaaggattggatct 577
               |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4755843 gccatatgggtttgatattggcaattctgaaagaggcaatgttctaaagggattggatct 4755902

                                              
Query: 578     cggggttgagggaatgaaagttggtggccag 608
                ||||||||||||||||| ||||| ||||||
Sbjct: 4755903 tggggttgagggaatgaaggttggaggccag 4755933



 Score =  109 bits (55), Expect = 2e-20
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                           
Query: 443     ggtacattacgtggccaagtggaagggcataacattcatgacaagcaggcagggcctcgg 502
               ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4755505 ggtacattatgtggccaagtggaagggcataacattcatgacaagcaggcagggtctcgg 4755564

                  
Query: 503     tgt 505
               |||
Sbjct: 4755565 tgt 4755567



 Score =  105 bits (53), Expect = 3e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                           
Query: 606     cagaggttggtcattgttcctccggagctagcttatggaaaaaagggcgttcaggaaatt 665
               ||||||||| |||| |||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 4756215 cagaggttgatcatagttcctcctgagctggcttatgggaagaagggcgttcaggaaatt 4756274

                                    
Query: 666     cctcctaatgcaactattgag 686
               ||||| |||||||||||||||
Sbjct: 4756275 cctccaaatgcaactattgag 4756295



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 341     caagattccggagagcgacttcaccactctgcctaatggc 380
               |||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 4754388 caagattccggagagcgagttcaccaccctgcccaatggc 4754427



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 731     tcctgtgaagatcgttgaaggataattgtgcattgacttct 771
               ||||||||||||| ||||||||||  ||||||| |||||||
Sbjct: 4756520 tcctgtgaagatcattgaaggatagatgtgcatagacttct 4756560
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0084L07
          Length = 127992

 Score =  141 bits (71), Expect = 5e-30
 Identities = 86/91 (94%)
 Strand = Plus / Plus

                                                                         
Query: 518   gccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaaggattggatct 577
             |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 73753 gccatatgggtttgatattggcaattctgaaagaggcaatgttctaaagggattggatct 73812

                                            
Query: 578   cggggttgagggaatgaaagttggtggccag 608
              ||||||||||||||||| ||||| ||||||
Sbjct: 73813 tggggttgagggaatgaaggttggaggccag 73843



 Score =  109 bits (55), Expect = 2e-20
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                         
Query: 443   ggtacattacgtggccaagtggaagggcataacattcatgacaagcaggcagggcctcgg 502
             ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 73415 ggtacattatgtggccaagtggaagggcataacattcatgacaagcaggcagggtctcgg 73474

                
Query: 503   tgt 505
             |||
Sbjct: 73475 tgt 73477



 Score =  105 bits (53), Expect = 3e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                         
Query: 606   cagaggttggtcattgttcctccggagctagcttatggaaaaaagggcgttcaggaaatt 665
             ||||||||| |||| |||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 74125 cagaggttgatcatagttcctcctgagctggcttatgggaagaagggcgttcaggaaatt 74184

                                  
Query: 666   cctcctaatgcaactattgag 686
             ||||| |||||||||||||||
Sbjct: 74185 cctccaaatgcaactattgag 74205



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 341   caagattccggagagcgacttcaccactctgcctaatggc 380
             |||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 72298 caagattccggagagcgagttcaccaccctgcccaatggc 72337



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 731   tcctgtgaagatcgttgaaggataattgtgcattgacttct 771
             ||||||||||||| ||||||||||  ||||||| |||||||
Sbjct: 74430 tcctgtgaagatcattgaaggatagatgtgcatagacttct 74470
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>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score =  141 bits (71), Expect = 5e-30
 Identities = 86/91 (94%)
 Strand = Plus / Plus

                                                                         
Query: 518   gccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaaggattggatct 577
             |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 30356 gccatatgggtttgatattggcaattctgaaagaggcaatgttctaaagggattggatct 30415

                                            
Query: 578   cggggttgagggaatgaaagttggtggccag 608
              ||||||||||||||||| ||||| ||||||
Sbjct: 30416 tggggttgagggaatgaaggttggaggccag 30446



 Score =  109 bits (55), Expect = 2e-20
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                         
Query: 443   ggtacattacgtggccaagtggaagggcataacattcatgacaagcaggcagggcctcgg 502
             ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 30018 ggtacattatgtggccaagtggaagggcataacattcatgacaagcaggcagggtctcgg 30077

                
Query: 503   tgt 505
             |||
Sbjct: 30078 tgt 30080



 Score =  105 bits (53), Expect = 3e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                         
Query: 606   cagaggttggtcattgttcctccggagctagcttatggaaaaaagggcgttcaggaaatt 665
             ||||||||| |||| |||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 30728 cagaggttgatcatagttcctcctgagctggcttatgggaagaagggcgttcaggaaatt 30787

                                  
Query: 666   cctcctaatgcaactattgag 686
             ||||| |||||||||||||||
Sbjct: 30788 cctccaaatgcaactattgag 30808



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 341   caagattccggagagcgacttcaccactctgcctaatggc 380
             |||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 28901 caagattccggagagcgagttcaccaccctgcccaatggc 28940



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 731   tcctgtgaagatcgttgaaggataattgtgcattgacttct 771
             ||||||||||||| ||||||||||  ||||||| |||||||
Sbjct: 31033 tcctgtgaagatcattgaaggatagatgtgcatagacttct 31073
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>ref|NM_111841.3| Arabidopsis thaliana FK506 binding / peptidyl-prolyl cis-trans
           isomerase (AT3G10060) mRNA, complete cds
          Length = 955

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 191/242 (78%)
 Strand = Plus / Plus

                                                                       
Query: 510 ggtggaacgccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaagga 569
           ||||||||||| ||||||||||| |||||  | || || |||||||||||||| ||||||
Sbjct: 515 ggtggaacgccttatgggtttgacgttggtcaatcagagagaggcaatgttctgaaagga 574

                                                                       
Query: 570 ttggatctcggggttgagggaatgaaagttggtggccagaggttggtcattgttcctccg 629
            | ||||| || ||||| || |||   || || || ||||| ||||| ||||||||||| 
Sbjct: 575 cttgatcttggtgttgaagggatgcgtgtaggcggtcagagattggtgattgttcctccc 634

                                                                       
Query: 630 gagctagcttatggaaaaaagggcgttcaggaaattcctcctaatgcaactattgagctg 689
           ||||| ||||| || || || || || || || |||||||| || || || || ||||| 
Sbjct: 635 gagctggcttacgggaagaaaggagtgcaagagattcctccaaacgctacgatagagctt 694

                                                                       
Query: 690 gatgtcgaactactatcaatcaaacagagtccatttgggagtcctgtgaagatcgttgaa 749
           ||  | || ||  |||||||||| |||||||| || ||||  || |||||||| ||||||
Sbjct: 695 gacattgagctgttatcaatcaagcagagtcctttcgggacgccagtgaagatagttgaa 754

             
Query: 750 gg 751
           ||
Sbjct: 755 gg 756
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>gb|AY122895.1| Arabidopsis thaliana AT3g10060/T22K18_11 mRNA, complete cds
          Length = 693

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 191/242 (78%)
 Strand = Plus / Plus

                                                                       
Query: 510 ggtggaacgccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaagga 569
           ||||||||||| ||||||||||| |||||  | || || |||||||||||||| ||||||
Sbjct: 448 ggtggaacgccttatgggtttgacgttggtcaatcagagagaggcaatgttctgaaagga 507

                                                                       
Query: 570 ttggatctcggggttgagggaatgaaagttggtggccagaggttggtcattgttcctccg 629
            | ||||| || ||||| || |||   || || || ||||| ||||| ||||||||||| 
Sbjct: 508 cttgatcttggtgttgaagggatgcgtgtaggcggtcagagattggtgattgttcctccc 567

                                                                       
Query: 630 gagctagcttatggaaaaaagggcgttcaggaaattcctcctaatgcaactattgagctg 689
           ||||| ||||| || || || || || || || |||||||| || || || || ||||| 
Sbjct: 568 gagctggcttacgggaagaaaggagtgcaagagattcctccaaacgctacgatagagctt 627

                                                                       
Query: 690 gatgtcgaactactatcaatcaaacagagtccatttgggagtcctgtgaagatcgttgaa 749
           ||  | || ||  |||||||||| |||||||| || ||||  || |||||||| ||||||
Sbjct: 628 gacattgagctgttatcaatcaagcagagtcctttcgggacgccagtgaagatagttgaa 687

             
Query: 750 gg 751
           ||
Sbjct: 688 gg 689
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>gb|AY094442.1| Arabidopsis thaliana AT3g10060/T22K18_11 mRNA, complete cds
          Length = 905

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 191/242 (78%)
 Strand = Plus / Plus

                                                                       
Query: 510 ggtggaacgccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaagga 569
           ||||||||||| ||||||||||| |||||  | || || |||||||||||||| ||||||
Sbjct: 515 ggtggaacgccttatgggtttgacgttggtcaatcagagagaggcaatgttctgaaagga 574

                                                                       
Query: 570 ttggatctcggggttgagggaatgaaagttggtggccagaggttggtcattgttcctccg 629
            | ||||| || ||||| || |||   || || || ||||| ||||| ||||||||||| 
Sbjct: 575 cttgatcttggtgttgaagggatgcgtgtaggcggtcagagattggtgattgttcctccc 634

                                                                       
Query: 630 gagctagcttatggaaaaaagggcgttcaggaaattcctcctaatgcaactattgagctg 689
           ||||| ||||| || || || || || || || |||||||| || || || || ||||| 
Sbjct: 635 gagctggcttacgggaagaaaggagtgcaagagattcctccaaacgctacgatagagctt 694

                                                                       
Query: 690 gatgtcgaactactatcaatcaaacagagtccatttgggagtcctgtgaagatcgttgaa 749
           ||  | || ||  |||||||||| |||||||| || ||||  || |||||||| ||||||
Sbjct: 695 gacattgagctgttatcaatcaagcagagtcctttcgggacgccagtgaagatagttgaa 754

             
Query: 750 gg 751
           ||
Sbjct: 755 gg 756
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>emb|BX826048.1|CNS0A54Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZC11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 902

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 107/131 (81%)
 Strand = Plus / Plus

                                                                       
Query: 510 ggtggaacgccatatgggtttgatgttggcaattctgaaagaggcaatgttctaaaagga 569
           ||||||||||| ||||||||||| |||||  | || || |||||||||||||| ||||||
Sbjct: 495 ggtggaacgccttatgggtttgacgttggtcaatcagagagaggcaatgttctgaaagga 554

                                                                       
Query: 570 ttggatctcggggttgagggaatgaaagttggtggccagaggttggtcattgttcctccg 629
            | ||||| || ||||| || |||   || || || ||||| ||||| ||||||||||| 
Sbjct: 555 cttgatcttggtgttgaagggatgcgtgtaggcggtcagagattggtgattgttcctccc 614

                      
Query: 630 gagctagctta 640
           ||||| |||||
Sbjct: 615 gagctggctta 625
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>emb|BX511113.8| Zebrafish DNA sequence from clone DKEY-38J10 in linkage group 17,
              complete sequence
          Length = 191193

 Score = 48.1 bits (24), Expect = 0.061
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 878    tgtaatatttttctttcttggagcttttttcc 909
              |||||||||||||||| ||| |||||||||||
Sbjct: 117236 tgtaatatttttcttttttgcagcttttttcc 117267
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>gb|AY855287.1| Bluetongue virus 2 isolate OnaB NS2 protein (S8) gene, complete cds
          Length = 1125

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 549 agaggcaatgttctaaaaggattgga 574
           ||||||||||||||||||| ||||||
Sbjct: 656 agaggcaatgttctaaaagaattgga 681
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>gb|AC116424.1| Homo sapiens 3 BAC RP11-265F19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 60398

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 100   ccctcctgccctccctgtcccc 121
             ||||||||||||||||||||||
Sbjct: 36004 ccctcctgccctccctgtcccc 36025
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>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 9      ccccaaaaaatatccaatccaa 30
              ||||||||||||||||||||||
Sbjct: 103443 ccccaaaaaatatccaatccaa 103464
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>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full
           insert sequence
          Length = 963

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 250 tagccgccgccaccgcagccgt 271
           ||||||||||||||||||||||
Sbjct: 427 tagccgccgccaccgcagccgt 406
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>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 699   ctactatcaatcaaacagagtccatt 724
             ||||||||||||||||||||| ||||
Sbjct: 70602 ctactatcaatcaaacagagttcatt 70627
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>gb|L08673.1|BTVS2A Bluetongue virus mRNA sequence
          Length = 1125

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 549 agaggcaatgttctaaaaggattgga 574
           ||||||||||||||||||| ||||||
Sbjct: 656 agaggcaatgttctaaaagaattgga 681
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>emb|CR855240.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0103C08-B0602B01,
              complete sequence
          Length = 150079

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    ccgcgcggacgcctccccgga 208
              |||||||||||||||||||||
Sbjct: 132767 ccgcgcggacgcctccccgga 132787
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>ref|NM_001060082.1| Oryza sativa (japonica cultivar-group) Os04g0560500 (Os04g0560500)
           mRNA, complete cds
          Length = 1446

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 188 ccgcgcggacgcctccccgga 208
           |||||||||||||||||||||
Sbjct: 96  ccgcgcggacgcctccccgga 116
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>gb|AC095876.6| Rattus norvegicus  BAC CH230-10G12 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 242605

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 880   taatatttttctttcttggag 900
             |||||||||||||||||||||
Sbjct: 76828 taatatttttctttcttggag 76808
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>ref|XM_969655.1| PREDICTED: Tribolium castaneum similar to CG9038-PA, isoform A
            (LOC663616), mRNA
          Length = 1773

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 776  aaaatgatgtatatttgaaca 796
            |||||||||||||||||||||
Sbjct: 1196 aaaatgatgtatatttgaaca 1216
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>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 542    ttctgaaagaggcaatgttctaaaa 566
              ||||||||||||| |||||||||||
Sbjct: 154807 ttctgaaagaggccatgttctaaaa 154783
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>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence,
             complete sequence
          Length = 96232

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 522   tatgggtttgatgttggcaattctgaaagaggcaatgttctaaaaggattggatctcggg 581
             ||||||||||| |||||  | || || |||||||||||||| |||||| | ||||| || 
Sbjct: 40212 tatgggtttgacgttggtcaatcagagagaggcaatgttctgaaaggacttgatcttggt 40153

                  
Query: 582   gttga 586
             |||||
Sbjct: 40152 gttga 40148
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>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence
          Length = 241179

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 542    ttctgaaagaggcaatgttctaaaa 566
              ||||||||||||| |||||||||||
Sbjct: 194556 ttctgaaagaggccatgttctaaaa 194580
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>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 542    ttctgaaagaggcaatgttctaaaa 566
              ||||||||||||| |||||||||||
Sbjct: 176262 ttctgaaagaggccatgttctaaaa 176238
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>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence
          Length = 215236

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 887   tttctttcttggagctttttt 907
             |||||||||||||||||||||
Sbjct: 68221 tttctttcttggagctttttt 68201
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>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence
          Length = 160042

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 787   tatttgaacattctggagagtgtta 811
             |||||||||||| ||||||||||||
Sbjct: 53067 tatttgaacattgtggagagtgtta 53043
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>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 787    tatttgaacattctggagagtgtta 811
              |||||||||||| ||||||||||||
Sbjct: 118030 tatttgaacattgtggagagtgtta 118006
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>emb|CR382322.5| Zebrafish DNA sequence from clone DKEY-29D11 in linkage group 8,
             complete sequence
          Length = 70138

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 943   tatatatattcagttcatttt 963
             |||||||||||||||||||||
Sbjct: 58286 tatatatattcagttcatttt 58266
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 188      ccgcgcggacgcctccccgga 208
                |||||||||||||||||||||
Sbjct: 28049031 ccgcgcggacgcctccccgga 28049051
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>ref|XM_690902.1| PREDICTED: Danio rerio similar to tubulin, beta, 2 (LOC567598),
           mRNA
          Length = 3000

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 110 ctccctgtccccgcgcccgctctcc 134
           ||||||||||||||||| |||||||
Sbjct: 577 ctccctgtccccgcgccggctctcc 553
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>emb|AL162391.15| Human DNA sequence from clone RP11-438L3 on chromosome 9 Contains the
            5' end of a novel gene, complete sequence
          Length = 28420

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 882  atatttttctttcttggagcttttt 906
            |||||||||||||||| ||||||||
Sbjct: 6933 atatttttctttcttgaagcttttt 6909
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>emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on chromosome 10, complete
             sequence
          Length = 142281

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 99    tccctcctgccctccctgtccccgc 123
             ||||||||||||||||| |||||||
Sbjct: 38542 tccctcctgccctccctctccccgc 38566
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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   ccgcgcggacgcctccccgga 208
             |||||||||||||||||||||
Sbjct: 56257 ccgcgcggacgcctccccgga 56277
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>gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete sequence
          Length = 121705

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 488   caggcagggcctcggtgtcac 508
             |||||||||||||||||||||
Sbjct: 64562 caggcagggcctcggtgtcac 64542
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>emb|BX296526.5| Zebrafish DNA sequence from clone DKEY-229D2 in linkage group 5, complete
              sequence
          Length = 179086

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 110    ctccctgtccccgcgcccgctctcc 134
              ||||||||||||||||| |||||||
Sbjct: 137324 ctccctgtccccgcgccggctctcc 137300
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>gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, complete sequence
          Length = 187860

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 547   aaagaggcaatgttctaaaaggatt 571
             ||||||||||| |||||||||||||
Sbjct: 69238 aaagaggcaatcttctaaaaggatt 69262
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>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 780   tgatgtatatttgaacattctggag 804
             ||||||||||||||| |||||||||
Sbjct: 37849 tgatgtatatttgaagattctggag 37825
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>gb|AY884005.1| Citrus sudden death-associated virus, complete genome
          Length = 6820

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 347 tccggagagcgacttcaccac 367
           |||||||||||||||||||||
Sbjct: 891 tccggagagcgacttcaccac 911
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 902    ttttttccagctcattggaga 922
              |||||||||||||||||||||
Sbjct: 145394 ttttttccagctcattggaga 145414
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>dbj|AB025574.1| Homo sapiens DNA, satellite sequence near the poly(A) polymerase
           (PAP) gene in chromosome 14q32.1-q32.2
          Length = 804

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 902 ttttttccagctcattggaga 922
           |||||||||||||||||||||
Sbjct: 120 ttttttccagctcattggaga 140


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 191,604,999
Number of extensions: 10941263
Number of successful extensions: 227920
Number of sequences better than 10.0: 39
Number of HSP's gapped: 227916
Number of HSP's successfully gapped: 52
Length of query: 996
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 973
Effective length of database: 18,503,978,556
Effective search space: 18004371134988
Effective search space used: 18004371134988
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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