ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf126e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073063:Os06g0127900 | 622 | e-178 | 2 | Os06g0257500:Os06g0257500 | 273 | 3e-73 | 3 | Os01g0865700:Os01g0865700 | 35 | 0.15 | 4 | Os02g0276000:Os02g0276000 | 32 | 1.00 | 5 | AY596808:Os03g0815100 | 32 | 1.00 | 6 | AK104712:Os03g0815100 | 32 | 1.00 | 7 | AK104551:Os03g0815100 | 32 | 1.00 | 8 | AK099245:Os03g0815100 | 32 | 1.00 | 9 | AK067690:Os03g0815100 | 32 | 1.00 | 10 | AK111162: | 32 | 1.3 | 11 | AK121849:Os10g0177400 | 31 | 1.7 | 12 | AK100913:Os02g0518800 | 30 | 2.9 | 13 | AK071802:Os10g0578700 | 30 | 2.9 | 14 | Os01g0685200:Os01g0685200 | 30 | 3.8 | 15 | AK107409: | 30 | 4.9 | 16 | AK101468:Os10g0412600 | 29 | 8.4 | 17 | AK065212:Os06g0130400 | 29 | 8.4 |
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>AK073063:Os06g0127900 | Length = 345 Score = 622 bits (1605), Expect = e-178 Identities = 302/328 (92%), Positives = 317/328 (96%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 D EEPLLAESSDRFSMFPIR+PQIWEFYKKAVASFWTAEEVDLS+DARHWD LS DERH Sbjct: 18 DMEEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERH 77 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 F+SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLL+ETYIR Sbjct: 78 FVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 137 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWL 665 DDVEKDRLFRAIDT+PAVRRKADWA+RWIDGGERFAER+VAFACVEGIFFSGSFCAIFWL Sbjct: 138 DDVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWL 197 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCD 845 KKRGLMPGLTFSNELISRDEGLHCDFACLLYD+LRGKLDESRV EIV++AVDIEREFVCD Sbjct: 198 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCD 257 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRV 1025 ALP ALVGMNG+LMSQYIEFVADRLLMALGC K+YN NPFDWMELISLQGKTNFFEKRV Sbjct: 258 ALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRV 317 Query: 1026 GEYQKASVMSNLNGGAATQHVFSIDEDF 1109 G+YQKASVMS+LNGGA+ HVFSIDEDF Sbjct: 318 GDYQKASVMSSLNGGASCNHVFSIDEDF 345
>Os06g0257500:Os06g0257500 | Length = 352 Score = 273 bits (697), Expect = 3e-73 Identities = 156/267 (58%), Positives = 172/267 (64%) Frame = -1 Query: 959 GGVVQLVAAQRHEQAVCHELDVLAHEVAVHADERAGERVADELPLNVHGLGDDLEDAGLV 780 G + + ++RHE+AV ELDVLAHEVAVHADER GERVADELPL+V G+GDDL DA LV Sbjct: 30 GEEIMRMISERHEEAVGDELDVLAHEVAVHADERDGERVADELPLDVDGVGDDLADARLV 89 Query: 779 QLXXXXXXXXXXXXXXXXXXXGDELVGEGEARHEPPLLQPXXXXXXXXXXXXXXXXXXXX 600 +L GDELVGEGEARHEPPLL+P Sbjct: 90 ELAAEEVVEEAGEVAVQALVAGDELVGEGEARHEPPLLEPEDGAEGAREEDPLDAGEGDE 149 Query: 599 XXXXXLPAVDPAEGPVGLAANGGDGVDXXXXXXXXXXXXXXXLYEQRVHLGVDVLDGDLE 420 L AVDPA GPVGLAA+G DGVD L +QRVHL VDVLDGDLE Sbjct: 150 ALGEALAAVDPAHGPVGLAAHGRDGVDGAEQPVLLGAVADVGLEQQRVHLRVDVLDGDLE 209 Query: 419 AVESPGLGDLHVRHEPGGEVLEHDAVXXXXXXEHMGDEVALVVGESRVPVARVGGEVHLL 240 +VE LGDLHV HEPGGEVLEHDAV EH+GDEVALV G+ VPVARVGGEVHLL Sbjct: 210 SVEGARLGDLHVGHEPGGEVLEHDAVGGGEEGEHVGDEVALVGGQRGVPVARVGGEVHLL 269 Query: 239 GGPEGGHRLLVELPDLREPDGEHGEAV 159 PE HRLLVELPDLR PD EH E++ Sbjct: 270 RRPERRHRLLVELPDLRVPDREHRESL 296
>Os01g0865700:Os01g0865700 | Length = 404 Score = 34.7 bits (78), Expect = 0.15 Identities = 29/131 (22%), Positives = 56/131 (42%) Frame = +3 Query: 528 IPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 707 + A+RR + A D + F + + SGS C+ + G++ L + Sbjct: 114 VGALRRLRELAAECEDSRAMLESQGGVFDVLSRVVTSGSACSTAREEAVGVLASLRIPEQ 173 Query: 708 LISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLM 887 + H + A L +LR +SR + AV + R +P ++G+N +L+ Sbjct: 174 ELIGVSTRHGNLAESLTAVLRSSNLQSR-----AHAVQLVRTLADAVVPAWVIGLNAELL 228 Query: 888 SQYIEFVADRL 920 ++ + V DR+ Sbjct: 229 AEVVGVVRDRV 239
>Os02g0276000:Os02g0276000 | Length = 413 Score = 32.0 bits (71), Expect = 1.00 Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 10/75 (13%) Frame = +2 Query: 980 AHLAAGQDKLLREAR------RRVPEGVRHVQPQRRRRDP--ARLQH-RRGLLISHSDDM 1132 AH+ A D R A RR R V+ + RRR P RL+H RRGLLI H Sbjct: 33 AHILAAPDVRHRLAYVLVVPPRRAVVVRRRVEARLRRRRPHARRLRHLRRGLLIPHRPPR 92 Query: 1133 QSPLPMARWP-RLVA 1174 P P+ P R+VA Sbjct: 93 HEPRPLPGEPLRVVA 107
>AY596808:Os03g0815100 | Length = 316 Score = 32.0 bits (71), Expect = 1.00 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 1 DTRTTASPI---SQFPTRKSFPASRPAPPPELRRCLP 102 +TRT S I FP SFPA +PAPPP +P Sbjct: 204 ETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVP 240
>AK104712:Os03g0815100 | Length = 316 Score = 32.0 bits (71), Expect = 1.00 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 1 DTRTTASPI---SQFPTRKSFPASRPAPPPELRRCLP 102 +TRT S I FP SFPA +PAPPP +P Sbjct: 204 ETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVP 240
>AK104551:Os03g0815100 | Length = 316 Score = 32.0 bits (71), Expect = 1.00 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 1 DTRTTASPI---SQFPTRKSFPASRPAPPPELRRCLP 102 +TRT S I FP SFPA +PAPPP +P Sbjct: 204 ETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVP 240
>AK099245:Os03g0815100 | Length = 316 Score = 32.0 bits (71), Expect = 1.00 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 1 DTRTTASPI---SQFPTRKSFPASRPAPPPELRRCLP 102 +TRT S I FP SFPA +PAPPP +P Sbjct: 204 ETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVP 240
>AK067690:Os03g0815100 | Length = 316 Score = 32.0 bits (71), Expect = 1.00 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 1 DTRTTASPI---SQFPTRKSFPASRPAPPPELRRCLP 102 +TRT S I FP SFPA +PAPPP +P Sbjct: 204 ETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVP 240
>AK111162: | Length = 252 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = +1 Query: 7 RTTASPISQFPTRKSFPASRPAPPPELRRCLPPFRWCPP 123 R P S+ P S PA+RP PPP R LPP PP Sbjct: 134 RLPKPPPSRAPA--SAPANRPPPPPRPPRLLPPLPPPPP 170
>AK121849:Os10g0177400 | Length = 348 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = -2 Query: 724 SSREMSSLEKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRSPPSIQRRAQSAL 545 SSR S+ ++ P + Q+ Q P+++ + + + P+ RRA SA Sbjct: 150 SSRSRSTQQQSYPQKQQQAQPQQPKQSLPQQQQKQSLPQQQQQQMPHEKPTTLRRAASAA 209 Query: 544 RRTAGMVSMA 515 RTAG++ + Sbjct: 210 ARTAGIMQQS 219
>AK100913:Os02g0518800 | Length = 143 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +1 Query: 13 TASPISQFPTRKSFPASRPAPP---PELRRCLPPF-RWCPP 123 T+SP + P R+ RP PP P RC PP CPP Sbjct: 45 TSSPAAAGPIRRGRHRGRPLPPLPPPPSPRCTPPLASRCPP 85
>AK071802:Os10g0578700 | Length = 247 Score = 30.4 bits (67), Expect = 2.9 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 18/73 (24%) Frame = +2 Query: 935 LQQAVQRHQPVRL------------DGAHLAAGQDKLLREARRRVPEGVRHVQPQ----- 1063 LQ+ VQRH P R G H G+ EARR+ P HVQPQ Sbjct: 114 LQRRVQRHHPARRRRLRVGRPEVHSGGEHGGVGRPL---EARRQRPRPAAHVQPQPDGPR 170 Query: 1064 -RRRRDPARLQHR 1099 R +L+HR Sbjct: 171 AAERCQAQQLRHR 183
>Os01g0685200:Os01g0685200 | Length = 479 Score = 30.0 bits (66), Expect = 3.8 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +1 Query: 16 ASPISQFPTRKSFPASRPAPPPELRRCLPPFRWC 117 ASP PT + P R P P LR PPF WC Sbjct: 61 ASPQPCSPTDAAAPPPRSLPTPPLRLLWPPF-WC 93
>AK107409: | Length = 750 Score = 29.6 bits (65), Expect = 4.9 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +1 Query: 907 WQTACSWRWAATSCTTPPTRSTGW 978 W T+ WRW +T P+R+ W Sbjct: 658 WATSSPWRWTPRRASTRPSRTAWW 681
>AK101468:Os10g0412600 | Length = 82 Score = 28.9 bits (63), Expect = 8.4 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +1 Query: 19 SPISQFPTRKSFPASRPAPPPELRRCLPP 105 SP SQ P R PAS PP + LPP Sbjct: 5 SPSSQPPRRPCSPASTTPPPSPVETALPP 33
>AK065212:Os06g0130400 | Length = 542 Score = 28.9 bits (63), Expect = 8.4 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -1 Query: 986 DELHPVERVGGVVQLVAAQRHEQAVCHELDVLAHEVAVHADE---RAGERVADELPLNVH 816 D HPV G++QL A+ + LD++ + HA E AG DE L++ Sbjct: 133 DPYHPVTNPSGIIQLGLAENY-----LSLDLVGRWMEEHAAEAASMAGGEDEDERELSIR 187 Query: 815 GL 810 GL Sbjct: 188 GL 189 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,708,260 Number of extensions: 550134 Number of successful extensions: 3172 Number of sequences better than 10.0: 17 Number of HSP's gapped: 3144 Number of HSP's successfully gapped: 17 Length of query: 437 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 333 Effective length of database: 11,235,591 Effective search space: 3741451803 Effective search space used: 3741451803 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
