ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf126e06 |
|---|---|
| Clone Library Name | barley_pub |
>P49730:RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain - Nicotiana tabacum| (Common tobacco) Length = 329 Score = 547 bits (1409), Expect = e-155 Identities = 271/326 (83%), Positives = 293/326 (89%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLLA S DRF MFPI++PQIWE YKKA+ASFWTAEEVDLSSD RHW+T L+ ERHFI Sbjct: 6 EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWET-LTPGERHFI 64 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 +HVLAFFAASDGIVLENLA RFM +VQVAEARAFYGFQIAIENIHSEMYSLL+E+YI+D Sbjct: 65 THVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDS 124 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 EK RLFRA++T P V +KA WALRWIDG E FAER+VAFACVEGIFFSGSFCAIFWLKK Sbjct: 125 DEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKK 184 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHCDFACLLY +LR KL E RV IV++AV+IEREFVCDAL Sbjct: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFVCDAL 244 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 PCALVGMNGDLMS+YIEFVADRLL ALG +KLYNA NPFDWMELISLQGKTNFFEKRVGE Sbjct: 245 PCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEKRVGE 304 Query: 1032 YQKASVMSNLNGGAATQHVFSIDEDF 1109 YQKASVMS+LNG AT H F +DEDF Sbjct: 305 YQKASVMSSLNGNGAT-HEFKLDEDF 329
>Q6Y657:RIR2B_ARATH Ribonucleoside-diphosphate reductase small chain B - Arabidopsis| thaliana (Mouse-ear cress) Length = 333 Score = 539 bits (1388), Expect = e-152 Identities = 257/328 (78%), Positives = 294/328 (89%), Gaps = 2/328 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEP+L + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D R W+ +L+NDERHFI Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 HVLAFFAASDGIVLENL++RFMSDVQ++EARAFYGFQIAIENIHSEMYSLL++TYI+D+ Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 E+D LFRAI+TIP V +KA+WA++WI+G + FAERIVAFACVEGIFFSGSFC+IFWLKK Sbjct: 126 KERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKK 185 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHCDFACL+Y +LR KLDE R+ IV +AV+IEREFVCDAL Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREFVCDAL 245 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 PCALVGMN +LMSQYIEFVADRLL ALGC K+Y +NPFDWMELISLQGKTNFFEKRVGE Sbjct: 246 PCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFEKRVGE 305 Query: 1032 YQKASVMSNLNGGAA--TQHVFSIDEDF 1109 YQKAS+MS+++G AA HVF +DEDF Sbjct: 306 YQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>Q9LSD0:RIR2C_ARATH Ribonucleoside-diphosphate reductase small chain C - Arabidopsis| thaliana (Mouse-ear cress) Length = 332 Score = 538 bits (1387), Expect = e-152 Identities = 262/327 (80%), Positives = 290/327 (88%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL + DRF MFPI +PQIWE YKKA ASFWTAEEVDLS D R W+ +L++ ERHFI Sbjct: 6 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFI 65 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 HVLAFFAASDGIVLENLASRFMSDVQV+EARAFYGFQIAIENIHSEMYSLL++TYI+D+ Sbjct: 66 KHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 E+D LFRAI+TIP V +KA WA++WIDG + FAERI+AFACVEGIFFSGSFC+IFWLKK Sbjct: 126 KERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKK 185 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHCDFACLLY +L+ KL E RV IV +AV+IEREFVCDAL Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDAL 245 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 PCALVGMN DLMSQYIEFVADRLL ALG K+Y TNPFDWMELISLQGKTNFFEKRVG+ Sbjct: 246 PCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRVGD 305 Query: 1032 YQKASVMSNLNG-GAATQHVFSIDEDF 1109 YQKASVMS++NG GA HVFS+DEDF Sbjct: 306 YQKASVMSSVNGNGAFDNHVFSLDEDF 332
>P50651:RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A - Arabidopsis| thaliana (Mouse-ear cress) Length = 341 Score = 491 bits (1264), Expect = e-138 Identities = 238/328 (72%), Positives = 276/328 (84%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 ++EEPLL + RF+MFPIR+ IWE YKKA ASFWTAEEVDLS+D + W+ L++ E+H Sbjct: 16 ESEEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEA-LTDSEKH 74 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FISH+LAFFAASDGIVLENLA+RF++DVQV EARAFYGFQIA+ENIHSEMYSLL+ET+I+ Sbjct: 75 FISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIK 134 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWL 665 D EKDRLF AI+TIP + +KA W L WI FA R+VAFACVEGIFFSGSFCAIFWL Sbjct: 135 DSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWL 194 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCD 845 KKRGLMPGLTFSNELISRDEGLHCDFACLLY +L+ +L +V++IV EAV+IE EFVC Sbjct: 195 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCK 254 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRV 1025 ALPC L+GMN +LMSQYI+FVADRLL+ LGC + Y A NPFDWME ISLQGKTNFFEKRV Sbjct: 255 ALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRV 314 Query: 1026 GEYQKASVMSNLNGGAATQHVFSIDEDF 1109 GEYQKASVMSNL G + F+ +EDF Sbjct: 315 GEYQKASVMSNLQNG-NQNYEFTTEEDF 341
>P07201:RIR2_SPISO Ribonucleoside-diphosphate reductase small chain - Spisula| solidissima (Atlantic surf-clam) Length = 384 Score = 449 bits (1155), Expect = e-125 Identities = 221/326 (67%), Positives = 260/326 (79%), Gaps = 1/326 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EPLLA++ RF + PI++ IW+ YKKA ASFWTAEEVDLS D HW++ L +E+HFIS Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWES-LKKEEKHFIS 120 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 121 HVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQ 180 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 E+D LF AI+T+P V+ KADWA+RWI D +AER+VAFA VEGIFFSGSF +IFWLKK Sbjct: 181 ERDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKK 240 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RG+MPGLTFSNELISRDEGLHCDFACL++ L K + R+ +I+ EAV IE+ F+ +AL Sbjct: 241 RGIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEAL 300 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 PC L+GMN DLM QYIEFVADRLL+ L C+KLYN NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 301 PCRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGE 360 Query: 1032 YQKASVMSNLNGGAATQHVFSIDEDF 1109 YQK VMS G H F++D DF Sbjct: 361 YQKMGVMS--GGNTGDSHAFTLDADF 384
>P79733:RIR2_DANRE Ribonucleoside-diphosphate reductase M2 subunit - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 386 Score = 442 bits (1137), Expect = e-123 Identities = 221/327 (67%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL E+ RF +FPI++ IW+ YKKA ASFWTAEEVDLS D +HWD+ L ++ER+FI Sbjct: 66 EEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDS-LKDEERYFI 124 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 125 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 184 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V++KADWAL WI D R+ ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 185 KEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLK 244 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E V +I+ AV+IE+EF+ DA Sbjct: 245 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLTDA 304 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN DLM QYIEFVADRLL+ LG +K+Y NPFD+ME ISL+GKTNFFEKRVG Sbjct: 305 LPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKRVG 364 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMS T + F++D DF Sbjct: 365 EYQRMGVMS-----GTTDNTFTLDADF 386
>Q4KLN6:RIR2_RAT Ribonucleoside-diphosphate reductase M2 subunit - Rattus norvegicus| (Rat) Length = 390 Score = 441 bits (1134), Expect = e-123 Identities = 221/327 (67%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL E+ RF +FPI + IW+ YKKA ASFWTAEEVDLS D +HW+ L DERHFI Sbjct: 70 EEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA-LKPDERHFI 128 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V++KADWALRWI E + ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI++ +V IE+EF+ +A Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFLTEA 308 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRL++ LG NK++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVG 368 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMSN +T++ F++D DF Sbjct: 369 EYQRMGVMSN-----STENSFTLDADF 390
>P11157:RIR2_MOUSE Ribonucleoside-diphosphate reductase M2 subunit - Mus musculus| (Mouse) Length = 390 Score = 440 bits (1131), Expect = e-123 Identities = 221/327 (67%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 +EPLL E+ RF +FPI + IW+ YKKA ASFWTAEEVDLS D +HW+ L DERHFI Sbjct: 70 DEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA-LKPDERHFI 128 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 188 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V++KADWALRWI E + ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI++ AV IE+EF+ +A Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRL++ LG NK++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVG 368 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMSN +T++ F++D DF Sbjct: 369 EYQRMGVMSN-----STENSFTLDADF 390
>P42521:RIR2_DICDI Ribonucleoside-diphosphate reductase small chain - Dictyostelium| discoideum (Slime mold) Length = 338 Score = 439 bits (1129), Expect = e-122 Identities = 210/327 (64%), Positives = 260/327 (79%), Gaps = 2/327 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+L E+ DRF +FPI++P IW YKKA+AS W AEE+DL +D W+ L+++ERHFIS Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA+RFMS+VQ+ EAR FYGFQIAIENIHSE YSLLIETYI+D Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 KD+LF AI+TIP +++KA+WALRWI+ + FAER+VAFA VEGIFFSGSFC+IFWLKKR Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLM GLTFSNELISRDEGLHCDFACLLY L+ KLD + +++ +AV+ E+EF+C++LP Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN MSQYIEF ADRL+++LG K++N++NPF+WME+ISLQ K+NFFE +V EY Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311 Query: 1035 QKASVMSNLNGGAAT--QHVFSIDEDF 1109 K V N +DEDF Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>O15910:RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain - Trypanosoma brucei| brucei Length = 337 Score = 438 bits (1127), Expect = e-122 Identities = 217/329 (65%), Positives = 257/329 (78%), Gaps = 1/329 (0%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 + EEPLL E+ DR+ +FPI++P IW+ YK+A +S WT EE+DL +D W+ L + ERH Sbjct: 14 EVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK-LDDGERH 72 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FI HVLAFFAASDGIVLENLA RFM +VQV E R FYGFQIA+ENIHSE YS+LI+TY+ Sbjct: 73 FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWL 665 D EK RL AI TIP + +KA WA+ WI F R+VAFA VEGIFFSGSFCAIFWL Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWL 192 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYD-ILRGKLDESRVFEIVSEAVDIEREFVC 842 KKRGLMPGLTFSNELISRDEGLH DFACLLY+ + KL RV EI+ AV IEREF+C Sbjct: 193 KKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFIC 252 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 DALP L+GMN LM+QYIEFVADRLL++LG ++ YN+ NPFD+M++ISLQGKTNFFEK+ Sbjct: 253 DALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKK 312 Query: 1023 VGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 VGEYQKA VMS+ + VFS+D DF Sbjct: 313 VGEYQKAGVMSS----ERSSKVFSLDADF 337
>Q9C167:RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain - Neurospora crassa| Length = 410 Score = 438 bits (1127), Expect = e-122 Identities = 217/337 (64%), Positives = 262/337 (77%), Gaps = 9/337 (2%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 +A EPLL E+ RF +FPI++ +IW+ YKKA ASFWTAEE+DLS D W+ L++DE+ Sbjct: 74 EANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKF 133 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FISH+LAFFAASDGIV ENL RF +VQ+ EAR FYGFQI +ENIHSE YSLLI+TYI+ Sbjct: 134 FISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIK 193 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFW 662 + ++ LF AIDTIP +R+KADWALRWI D FA+R+VAFA VEGIFFSG+F +IFW Sbjct: 194 EPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASIFW 253 Query: 663 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVC 842 LKKRGLMPGLTFSNELISRDEGLH DFACLL+ L + + + EI+ +AV IE+EF+ Sbjct: 254 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEFLT 313 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 +ALPCAL+GMN DLM QYIEFVADRLL+ALG K+Y +TNPFD+ME ISL GKTNFFEKR Sbjct: 314 EALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFEKR 373 Query: 1023 VGEYQKASVMSNLNGGAATQHV--------FSIDEDF 1109 VG+YQKA VM++ A V F+ DEDF Sbjct: 374 VGDYQKAGVMNSTKKADADAEVAKNENGGDFTFDEDF 410
>Q6PEE3:RIR2B_MOUSE Ribonucleoside-diphosphate reductase M2 subunit B - Mus musculus| (Mouse) Length = 351 Score = 437 bits (1123), Expect = e-122 Identities = 220/327 (67%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL +SS RF +FPI++P IW YK+A ASFWTAEEVDLS D HW+ L +DE++FI Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNK-LKSDEKYFI 89 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SH+LAFFAASDGIV ENL RF +VQV EAR FYGFQI IEN+HSEMYSLLI+TYIRD Sbjct: 90 SHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDP 149 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLK 668 +++ LF AI+T+P V++KADWALRWI D F ER+VAFA VEGIFFSGSF AIFWLK Sbjct: 150 KKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLK 209 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+++AV IE+EF+ +A Sbjct: 210 KRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEA 269 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRLL LG +K++ A NPFD+ME ISL+GKTNFFEKRV Sbjct: 270 LPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVS 329 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ +VM+ T +VF++D DF Sbjct: 330 EYQRFAVMAE-----TTDNVFTLDADF 351
>Q4R741:RIR2B_MACFA Ribonucleoside-diphosphate reductase M2 subunit B - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 351 Score = 436 bits (1122), Expect = e-122 Identities = 220/327 (67%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL +SS RF +FPI++P IW+ YK+A ASFWTAEEVDLS D HW+ L DE++FI Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK-LKADEKYFI 89 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SH+LAFFAASDGIV ENL RF +VQV EAR FYGFQI IEN+HSEMYSLLI+TYIRD Sbjct: 90 SHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDP 149 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLK 668 +++ LF AI+T+P V++KADWALRWI D F ER+VAFA VEGIFFSGSF AIFWLK Sbjct: 150 KKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLK 209 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+ +AV IE+EF+ +A Sbjct: 210 KRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEA 269 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRLL+ LG +K++ A NPFD+ME ISL+GKTNFFEKRV Sbjct: 270 LPVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVS 329 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ +VM+ T +VF++D DF Sbjct: 330 EYQRFAVMAE-----TTDNVFTLDADF 351
>Q60561:RIR2_MESAU Ribonucleoside-diphosphate reductase M2 subunit - Mesocricetus| auratus (Golden hamster) Length = 386 Score = 436 bits (1120), Expect = e-121 Identities = 220/327 (67%), Positives = 257/327 (78%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 +EPLL E+ RF +FPI + IW+ YKKA ASFWTAEEVDLS D +HW+ L DERHFI Sbjct: 70 DEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEA-LKPDERHFI 128 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V++KADWALRWI E + ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI++ AV IE+EF+ +A Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFLTEA 308 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRL++ LG NK++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVG 368 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMSN F++D DF Sbjct: 369 EYQRMGVMSN---------SFTLDADF 386
>Q5R9G0:RIR2B_PONPY Ribonucleoside-diphosphate reductase M2 subunit B - Pongo pygmaeus| (Orangutan) Length = 351 Score = 435 bits (1119), Expect = e-121 Identities = 219/327 (66%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL +SS RF +FPI++P IW+ YK+A ASFWTAEEVDLS D HW+ L DE++FI Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK-LKADEKYFI 89 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SH+LAFFAASDGIV ENL RF +VQV EAR FYGFQI IEN+HSEMYSLLI+TYIRD Sbjct: 90 SHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDP 149 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLK 668 +++ LF AI+T+P V++KADWALRWI D F ER+VAFA VEG+FFSGSF AIFWLK Sbjct: 150 KKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLK 209 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+ +AV IE+EF+ +A Sbjct: 210 KRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEA 269 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRLL+ LG +K++ A NPFD+ME ISL+GKTNFFEKRV Sbjct: 270 LPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVS 329 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ +VM+ T +VF++D DF Sbjct: 330 EYQRFAVMAE-----TTDNVFTLDADF 351
>Q7LG56:RIR2B_HUMAN Ribonucleoside-diphosphate reductase M2 subunit B - Homo sapiens| (Human) Length = 351 Score = 435 bits (1119), Expect = e-121 Identities = 219/327 (66%), Positives = 261/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPLL +SS RF +FPI++P IW+ YK+A ASFWTAEEVDLS D HW+ L DE++FI Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK-LKADEKYFI 89 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SH+LAFFAASDGIV ENL RF +VQV EAR FYGFQI IEN+HSEMYSLLI+TYIRD Sbjct: 90 SHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDP 149 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLK 668 +++ LF AI+T+P V++KADWALRWI D F ER+VAFA VEG+FFSGSF AIFWLK Sbjct: 150 KKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLK 209 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+ +AV IE+EF+ +A Sbjct: 210 KRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEA 269 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRLL+ LG +K++ A NPFD+ME ISL+GKTNFFEKRV Sbjct: 270 LPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVS 329 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ +VM+ T +VF++D DF Sbjct: 330 EYQRFAVMAE-----TTDNVFTLDADF 351
>P31350:RIR2_HUMAN Ribonucleoside-diphosphate reductase M2 subunit - Homo sapiens| (Human) Length = 389 Score = 430 bits (1106), Expect = e-120 Identities = 216/327 (66%), Positives = 260/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 +EPLL E+ RF +FPI + IW+ YKKA ASFWTAEEVDLS D +HW++ L +ER+FI Sbjct: 69 DEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES-LKPEERYFI 127 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQ+ EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V++KADWALRWI E + ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+ AV IE+EF+ +A Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 307 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRL++ LG +K++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVG 367 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMS + T++ F++D DF Sbjct: 368 EYQRMGVMS-----SPTENSFTLDADF 389
>P48592:RIR2_DROME Ribonucleoside-diphosphate reductase M2 chain - Drosophila| melanogaster (Fruit fly) Length = 393 Score = 429 bits (1104), Expect = e-119 Identities = 215/326 (65%), Positives = 255/326 (78%), Gaps = 1/326 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EPLL E+ RF +FPI++ IW+ YKKA ASFWT EEVDLS D W L +DERHFIS Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHR-LKDDERHFIS 132 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENL RF +VQ+ EAR FYGFQIA+EN+HSEMYS+LI+TYIRD Sbjct: 133 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPH 192 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDG-GERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 +++ LF AI+T+PAV+RKADWAL WI F ERI+AFA VEGIFFSGSF +IFWLKK Sbjct: 193 QREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKK 252 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHCDFA L++ L + R+ EI+ +AV IE+EF+ DAL Sbjct: 253 RGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDAL 312 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 P L+GMN DLMSQYIEFVADRLL+ LG K+YN NPF++ME+ISL GKTNFFEK+VGE Sbjct: 313 PVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVGE 372 Query: 1032 YQKASVMSNLNGGAATQHVFSIDEDF 1109 YQ+ V+SN +VF++D DF Sbjct: 373 YQRMGVVSN-----PLDNVFTLDADF 393
>Q4R7Q7:RIR2_MACFA Ribonucleoside-diphosphate reductase M2 subunit - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 389 Score = 429 bits (1103), Expect = e-119 Identities = 215/327 (65%), Positives = 259/327 (79%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 +EPLL E+ RF +FPI + IW+ YKKA ASFWTAEEVDLS D +HW++ L +ER+FI Sbjct: 69 DEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES-LKPEERYFI 127 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 SHVLAFFAASDGIV ENL RF +VQ+ EAR FYGFQIA+ENIHSEMYSLLI+TYI+D Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLK 668 E++ LF AI+T+P V +KADWALRWI E + ER+VAFA VEGIFFSGSF +IFWLK Sbjct: 188 KEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDA 848 KRGLMPGLTFSNELISRDEGLHCDFACL++ L K E RV EI+ AV +E+EF+ +A Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFLTEA 307 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN LM QYIEFVADRL++ LG +K++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVG 367 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQ+ VMS + T++ F++D DF Sbjct: 368 EYQRMGVMS-----SPTENSFTLDADF 389
>O46310:RIR2_LEIAM Ribonucleoside-diphosphate reductase small chain - Leishmania| amazonensis Length = 345 Score = 428 bits (1101), Expect = e-119 Identities = 211/327 (64%), Positives = 255/327 (77%), Gaps = 1/327 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EEPL E+ R+ +FPI++ IW YK+ + WT EE+DL +D + W TL++ ERHFI Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDW-ATLNDGERHFI 82 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 HVLAFFA SDGIV+ENLA RFMSDV+V EARAFYGFQ+ +ENIHSE YS+L++TYI D Sbjct: 83 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 142 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 EK RL AI TIP +++KA+W +RWI F +R++ FA VEGIFFSGSFCA+FWLKK Sbjct: 143 EEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKK 202 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDI-LRGKLDESRVFEIVSEAVDIEREFVCDA 848 RGLMPGLTFSNELISRDEGLH DFACLLY+ ++ KL RV EI+ +AV+IEREF+CDA Sbjct: 203 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 262 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVG 1028 LP L+GMN +LM+QYIEFVADRLL++LG K Y +T PFD+ME+ISLQGKTNFFEKRVG Sbjct: 263 LPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVG 322 Query: 1029 EYQKASVMSNLNGGAATQHVFSIDEDF 1109 EYQKA VMS T FS+ EDF Sbjct: 323 EYQKAGVMST----EGTSKKFSLSEDF 345
>P50650:RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain - Plasmodium| falciparum (isolate Dd2) Length = 349 Score = 425 bits (1093), Expect = e-118 Identities = 204/328 (62%), Positives = 258/328 (78%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 + E +L + SDRF+++PI +P +W+FYKKA ASFWTAEE+DLSSD + ++ L+ +E+H Sbjct: 28 EINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK-LNENEKH 86 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FI HVLAFFAASDGIVLENLAS+F+ +VQ+ EA+ FY FQIA+ENIHSE YSLLI+ YI+ Sbjct: 87 FIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIK 146 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWL 665 D+ E+ LF AI+ IPAV+ KA WA +WI+ FAERIVA ACVEGI FSGSFCAIFW Sbjct: 147 DEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWF 206 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCD 845 KK+ + GLTFSNELISRDEGLH DF CL+Y +L KL E + IV EAV++ER F+C+ Sbjct: 207 KKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFICE 266 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRV 1025 +LPC L+GMN LMSQYIEFVADRLL LGC+K++++ NPF+WM+LISLQGKTNFFEKRV Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRV 326 Query: 1026 GEYQKASVMSNLNGGAATQHVFSIDEDF 1109 +YQK+ VM+ VF ++ +F Sbjct: 327 ADYQKSGVMAQ-----RKDQVFCLNTEF 349
>P42170:RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain - Caenorhabditis| elegans Length = 381 Score = 422 bits (1084), Expect = e-117 Identities = 209/329 (63%), Positives = 256/329 (77%), Gaps = 1/329 (0%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 DA+EP+L + +RF +FP++ IW FYKKAVASFWT EEVDL D W+ ++ DE++ Sbjct: 59 DADEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEK-MNGDEQY 117 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FIS +LAFFAASDGIV ENL RF ++VQV+EAR FYGFQIAIENIHSEMYS LIETYIR Sbjct: 118 FISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIR 177 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFW 662 D+ E++ LF A+D +++KADWALRWI D FAER++AFA VEGIFFSGSF +IFW Sbjct: 178 DETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFW 237 Query: 663 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVC 842 LKKRGLMPGLT SNELISRDEGLH DFACLLY L+ KL + R+++I+ +AV IE+EF+ Sbjct: 238 LKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLT 297 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 +ALP ++GMN LMSQYIEFVAD LL+ LGC+KLY + NPFD+ME IS+ GKTNFFEKR Sbjct: 298 EALPVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKR 357 Query: 1023 VGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 V EYQ+ VM N + F ++ DF Sbjct: 358 VSEYQRPGVMVN-----EAERQFDLEADF 381
>O57175:RIR2_VACCA Ribonucleoside-diphosphate reductase small chain - Vaccinia virus| (strain Ankara) (VACV) Length = 319 Score = 418 bits (1075), Expect = e-116 Identities = 207/325 (63%), Positives = 251/325 (77%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+LA + +RF +FPI++ IW YKKA ASFWT EEVD+S D W+ L+ DE++FI Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNK-LTPDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA RF ++VQ+ EAR FYGFQ+AIENIHSEMYSLLI+TY++D Sbjct: 61 HVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSN 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK+ LF AI+T+P V++KADWA +WI + ER++AFA VEGIFFSGSF +IFWLKKR Sbjct: 121 EKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L E V I+++AV IE+EF+ ALP Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN ++M YIEFVADRL+ LG K+YN TNPFD+ME ISL+GKTNFFEKRVGEY Sbjct: 241 VKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEY 300 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK VMS + FS+D DF Sbjct: 301 QKMGVMSQ------EDNHFSLDVDF 319
>P11158:RIR2_VACCV Ribonucleoside-diphosphate reductase small chain - Vaccinia virus| (strain Western Reserve / WR) (VACV) Length = 319 Score = 418 bits (1074), Expect = e-116 Identities = 207/325 (63%), Positives = 251/325 (77%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+LA + +RF +FPI++ IW YKKA ASFWT EEVD+S D W+ L+ DE++FI Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNK-LTPDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA RF ++VQ+ EAR FYGFQ+AIENIHSEMYSLLI+TY++D Sbjct: 61 HVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSN 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK+ LF AI+T+P V++KADWA +WI + ER++AFA VEGIFFSGSF +IFWLKKR Sbjct: 121 EKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L E V I+++AV IE+EF+ ALP Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN ++M YIEFVADRL+ LG K+YN TNPFD+ME ISL+GKTNFFEKRVGEY Sbjct: 241 VKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEY 300 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK VMS + FS+D DF Sbjct: 301 QKMGVMSQ------EDNHFSLDVDF 319
>P20493:RIR2_VACCC Ribonucleoside-diphosphate reductase small chain - Vaccinia virus| (strain Copenhagen) (VACV) Length = 319 Score = 417 bits (1073), Expect = e-116 Identities = 207/325 (63%), Positives = 251/325 (77%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+LA + +RF +FPI++ IW YKKA ASFWT EEVD+S D W+ L+ DE++FI Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNK-LTPDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA RF ++VQ+ EAR FYGFQ+AIENIHSEMYSLLI+TY++D Sbjct: 61 HVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSN 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK+ LF AI+T+P V++KADWA +WI + ER++AFA VEGIFFSGSF +IFWLKKR Sbjct: 121 EKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L E V I+++AV IE+EF+ ALP Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN ++M YIEFVADRL+ LG K+YN TNPFD+ME ISL+GKTNFFEKRVGEY Sbjct: 241 VKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEY 300 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK VMS + FS+D DF Sbjct: 301 QKMGVMSQ------EDNHFSLDVDF 319
>P29883:RIR2_VACCP Ribonucleoside-diphosphate reductase small chain - Vaccinia virus| (strain L-IVP) (VACV) Length = 319 Score = 416 bits (1068), Expect = e-115 Identities = 205/325 (63%), Positives = 251/325 (77%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+LA + +RF +FPI++ IW YKKA ASFWT EEVD+S D W+ ++ DE++FI Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNK-VTPDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA RF ++VQ+ EAR FYGF++AIENIHSEMYSLLI+TY++D Sbjct: 61 HVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSN 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK+ LF AI+T+P V++KADWA +WI + ER++AFA VEGIFFSGSF +IFWLKKR Sbjct: 121 EKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L E V I+++AV IE+EF+ ALP Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN ++M YIEFVADRL+ LG K+YN TNPFD+ME ISL+GKTNFFEKRVGEY Sbjct: 241 VKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEY 300 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK VMS + FS+D DF Sbjct: 301 QKMGVMSQ------KDNHFSLDVDF 319
>Q9DHU2:RIR2_YLDV Ribonucleoside-diphosphate reductase small chain - Yaba-like disease| virus (YLDV) Length = 325 Score = 413 bits (1062), Expect = e-115 Identities = 209/326 (64%), Positives = 256/326 (78%), Gaps = 1/326 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+L + +++ +FPI + IW+ YKKAVASFWT EEVDLS D W LS++E++FI Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDW-LKLSDNEKNFIK 64 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 H+LAFFAASDGIV ENLA RF S+VQ++EAR FYGFQIA+ENIHSEMYSLLI+TYI D Sbjct: 65 HILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSK 124 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLKK 671 EK+ LF AI+ + V++KA+WA +WI+ R + ER+VAFA VEGIFFSGSF AIFW+KK Sbjct: 125 EKNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKK 184 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHCDFAC+++ L S V +I+ EAV+IE+ F+ +A+ Sbjct: 185 RGLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAI 244 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 P L+GMN DLM QYIEFVADRLL+ LGC+K Y + NPFD+ME ISL+GKTNFFEKRV E Sbjct: 245 PVKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSE 304 Query: 1032 YQKASVMSNLNGGAATQHVFSIDEDF 1109 YQK SVMSN +VFS+D DF Sbjct: 305 YQKMSVMSN-----KKDNVFSLDIDF 325
>P36603:RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain -| Schizosaccharomyces pombe (Fission yeast) Length = 391 Score = 413 bits (1061), Expect = e-115 Identities = 210/329 (63%), Positives = 250/329 (75%), Gaps = 1/329 (0%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 + +E +L + RF +FPI++ +IW+FYKKA ASFWTAEE+DLS D WD L+ DER+ Sbjct: 63 ELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERY 122 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FIS VLA+FAASDGIV ENL RF S+VQ+ EAR YGFQI IENIHSE YSLL++TYIR Sbjct: 123 FISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIR 182 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFW 662 + EK R F AI T+ +++ KA WALRWI D +A R+VAFA VEGIFFSGSF +IFW Sbjct: 183 EPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFW 242 Query: 663 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVC 842 LKKRGLMPGLTFSNELI RDEGLH DFACL++ L+ + V I+ EAVDIE+E+ Sbjct: 243 LKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFT 302 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 DALP +L+GMN DLM QYIEFVADRLL+ALG +K YN TNPFD+ME ISL GKTNFFEK+ Sbjct: 303 DALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKK 362 Query: 1023 VGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 V +YQ A VMS H F+IDEDF Sbjct: 363 VSDYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>P33799:RIR2_VARV Ribonucleoside-diphosphate reductase small chain - Variola virus| Length = 319 Score = 412 bits (1058), Expect = e-114 Identities = 204/325 (62%), Positives = 250/325 (76%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+LA++ +RF +FPI++ IW YKKA ASFWT EEVD+S D W+ L+ DE++FI Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNK-LTPDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 HVLAFFAASDGIV ENLA RF +VQ+ EAR FYGFQ+AIENIHSEMYSLLI+TY++D Sbjct: 61 HVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSN 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK+ LF AI+T+P V++KADWA +WI + ER++AFA VEGIFFSGSF +IFWLKKR Sbjct: 121 EKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L E V I+++AV IE+EF+ ALP Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 L+GMN ++M Y+EFVADRL+ LG ++YN TNP D+ME ISL+GKTNFFEKRVGEY Sbjct: 241 VKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEY 300 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK VMS + FS+D DF Sbjct: 301 QKMGVMSQ------EDNHFSLDVDF 319
>P09938:RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 399 Score = 410 bits (1053), Expect = e-114 Identities = 206/329 (62%), Positives = 250/329 (75%), Gaps = 1/329 (0%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 + EEPLL E +R +FPI++ +IW+ YK+A ASFWTAEE+DLS D W+ ++ +ER Sbjct: 73 EKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERF 132 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 FIS VLAFFAASDGIV ENL F ++VQ+ EA++FYGFQI IENIHSE YSLLI+TYI+ Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFW 662 D E + LF AI TIP + KA+WALRWI D F ER+VAFA +EG+FFSGSF +IFW Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFW 252 Query: 663 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVC 842 LKKRG+MPGLTFSNELI RDEGLH DFACLL+ L+ K D + V +IV+EAV+IE+ + Sbjct: 253 LKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFL 312 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 DALP AL+GMN DLM+QY+EFVADRLL+A G K Y NPFD+ME ISL GKTNFFEKR Sbjct: 313 DALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKR 372 Query: 1023 VGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 V +YQKA VMS A F+ +EDF Sbjct: 373 VSDYQKAGVMSKSTKQEA--GAFTFNEDF 399
>P50649:RIR2_PLAFG Ribonucleoside-diphosphate reductase small chain - Plasmodium| falciparum (isolate FCR-3 / Gambia) Length = 322 Score = 409 bits (1051), Expect = e-113 Identities = 200/325 (61%), Positives = 252/325 (77%), Gaps = 2/325 (0%) Frame = +3 Query: 141 LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHV 320 +L + SDRF+++PI +P ++ FYKKA A FWTAEE+D SSD + ++ L+ +E+HFI HV Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEK-LNENEKHFIKHV 62 Query: 321 LAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEK 500 LAFFAASDGIVLENLA F+ +VQ+ EA+ FY FQIA+ENIHSE YSLLI+ YI+D+ E+ Sbjct: 63 LAFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKER 122 Query: 501 DRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGL 680 LF AI+ IPAV+ KA WA +WI+ FAERIVA ACVEGI FSGSFCAIFW KK+ Sbjct: 123 LNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNK 182 Query: 681 MPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEA--VDIEREFVCDALP 854 + GLTFSNELISRDEGLH DF CL+Y +L KL E V IV EA V++E+ F+C++LP Sbjct: 183 LHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLP 242 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEY 1034 C L+GMN LMSQYIEFVADRLL LGC+K++++ NPF+WM+LISLQGKTNFFEKRV +Y Sbjct: 243 CDLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADY 302 Query: 1035 QKASVMSNLNGGAATQHVFSIDEDF 1109 QK+ VM+ HVF ++ +F Sbjct: 303 QKSGVMAQ-----RKDHVFCLNTEF 322
>Q8SRR2:RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain - Encephalitozoon| cuniculi Length = 325 Score = 390 bits (1001), Expect = e-108 Identities = 207/327 (63%), Positives = 250/327 (76%), Gaps = 2/327 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 E LL +RF + PI++ IW+ YKKA +SFWT EEV L D W L+ ERHFIS Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGK-LNAKERHFIS 66 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 +VLAFFAASDGIV NL RF ++V+V EAR FYGFQ+AIENIHSEMYSLLI+TYIRD+ Sbjct: 67 YVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDND 126 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWI-DGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 EK+ LF AI TIP+V+ KADWA+RWI D FA R+VAFACVEGIFFSG+F +IFWLKK Sbjct: 127 EKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKK 186 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 RGLMPGLTFSNELISRDEGLHC+FACLL+ L+ K +R+ E+V +AV+IE++F+ ++L Sbjct: 187 RGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKC--NRIKEVVMDAVEIEKKFLSESL 244 Query: 852 PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGE 1031 P L+GMN +LM +YIEFVADRLL LG ++YNATNPFD+ME ISL GKTNFF+KR + Sbjct: 245 PVNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQ 304 Query: 1032 YQKASV-MSNLNGGAATQHVFSIDEDF 1109 YQKA V + N N F ID DF Sbjct: 305 YQKAFVGIENGNDS------FRIDVDF 325
>P32209:RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain - Swinepox virus| (strain Kasza) (SWPV) Length = 274 Score = 362 bits (928), Expect = 2e-99 Identities = 176/270 (65%), Positives = 214/270 (79%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 EP+L ES RF +FPI++ IW+ YK++VASFWT EEVDLS D WD L+ DE++FI Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDK-LTKDEKYFIK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 H+LAFFA+SDGIV ENLA RF DVQ +EAR FYGFQIA+ENIHSEMYSLLI+TY+RD++ Sbjct: 61 HILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNI 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 EK LF AI+T+ V++KADWA +WI + + ER+VAFA VEGIFFSGSF AIFW+KKR Sbjct: 121 EKMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKR 180 Query: 675 GLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALP 854 GLMPGLTFSNELISRDEGLHCDFACL++ L + + I+ +AV+IE+EF+ A+P Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIP 240 Query: 855 CALVGMNGDLMSQYIEFVADRLLMALGCNK 944 L+GMN LMSQYIEFVADRLL LGC K Sbjct: 241 VDLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>Q9QTF2:RIR2_RSIV Ribonucleoside-diphosphate reductase small chain - Red sea bream| iridovirus (RSIV) Length = 312 Score = 340 bits (873), Expect = 6e-93 Identities = 174/319 (54%), Positives = 226/319 (70%), Gaps = 2/319 (0%) Frame = +3 Query: 159 DRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAA 338 DR+ + P P +W YKKAVASFWT EEVDLS+D RHW L+ ER F+SH+LAFFA Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60 Query: 339 SDGIVLENLASRFMSDVQ-VAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFR 515 +DGIV +NL F ++ + EARAFYGFQ+AIENIH+EMY+ LI T + + + LF Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKE-NQAALFS 119 Query: 516 AIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGL 692 A + +P V+ KA WA +W++ + A R++AFA VEG+ FSGSF AIFWLKKR LMPGL Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179 Query: 693 TFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALPCALVGM 872 FSNELISRDEGLHCDFAC+L+ + K + +I+S+AVDIE F +AL L+GM Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239 Query: 873 NGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRVGEYQKASVM 1052 N D M YI+FVADRLL ALG K+YN +NPFD+M+ IS++GKTNFFE+RV EYQ+ V Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299 Query: 1053 SNLNGGAATQHVFSIDEDF 1109 + + F+++E+F Sbjct: 300 T------PSSMEFTMNEEF 312
>Q7T6Y9:RIR2_MIMIV Ribonucleoside-diphosphate reductase small chain - Mimivirus| Length = 417 Score = 333 bits (854), Expect = 9e-91 Identities = 149/308 (48%), Positives = 225/308 (73%), Gaps = 2/308 (0%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 +EP+L+ S+++++ PI++ ++W+ YK + ++WT EEVDL+ D W+ LS+D+R+FI Sbjct: 98 KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFI 157 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL++ T+++DD Sbjct: 158 MHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDD 217 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 671 +++L +I T+P++++KADW +WI + +A ++VAF+ VEG+FFSGSF +IFWLK Sbjct: 218 ALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKT 277 Query: 672 RGL--MPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCD 845 R + MPGL SN+ I+RDE H + AC++Y +L +L ES V++I+ EA++IE EF+ D Sbjct: 278 REMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFIND 337 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKRV 1025 +LPC L+GMN +LMSQYI++VADRLL+ LG K +N NPF++M+ I + K NFFEKR Sbjct: 338 SLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEKRN 397 Query: 1026 GEYQKASV 1049 Y A++ Sbjct: 398 DAYSNANI 405
>P49723:RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 345 Score = 275 bits (704), Expect = 2e-73 Identities = 143/329 (43%), Positives = 215/329 (65%), Gaps = 1/329 (0%) Frame = +3 Query: 126 DAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERH 305 + +E LL E+S RF MFPI++ +IW YKK ASFWTAEE++L+ D + L++D++ Sbjct: 22 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK-LTDDQKT 80 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 +I ++LA +SD +V + L F + +Q E ++FYGFQI +ENI+SE+YS++++ + + Sbjct: 81 YIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFK 140 Query: 486 DDVEKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFW 662 D + LF+ I +P V+ KA + RWI + +AER+VAFA EGIF +G++ ++FW Sbjct: 141 DP-KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFW 199 Query: 663 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVC 842 L + +MPGL +N I RD G + DF+CLL+ LR K + + +I++EAV+IE+E+ Sbjct: 200 LTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYS 259 Query: 843 DALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQGKTNFFEKR 1022 ++LP GM+ + YIEFVAD LL G K YNA NPF++ME ++ GKT FFEK+ Sbjct: 260 NSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKK 319 Query: 1023 VGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 V +YQKAS MS A + D+DF Sbjct: 320 VSDYQKASDMSK---SATPSKEINFDDDF 345
>P26713:RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain - African swine| fever virus (isolate Malawi Lil 20/1) (ASFV) Length = 327 Score = 240 bits (613), Expect = 8e-63 Identities = 131/332 (39%), Positives = 189/332 (56%), Gaps = 7/332 (2%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 E LL E+S RF++FPI+ P+ W +YKK + WTA+EVD+ D W+ + +R F Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEA-MPKPQREFYK 60 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 +LAFF +D IV+ENL + FM +++V E FY Q A E +HSE YS+ ++T I D+ Sbjct: 61 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 120 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLKK 671 E+ R+F I+ P +++ A W +W+D ER+V FA VEGI F F AI +LK+ Sbjct: 121 EQQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKE 180 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVF-EIVSEAVDIEREFVCDA 848 + +MPGL NE ISRDEG+HC FAC L + E ++ +I+ EAV++ EF+ A Sbjct: 181 QNIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYA 240 Query: 849 LPCA---LVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQ--GKTNFF 1013 A + G + +++ QYI + D L + C +YN NPF M L KTNFF Sbjct: 241 FDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFF 300 Query: 1014 EKRVGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 E R +YQ + A +F D+DF Sbjct: 301 ELRPTQYQNC-----VKDDAFAFKLFLDDDDF 327
>P42492:RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain - African swine| fever virus (strain BA71V) (ASFV) Length = 334 Score = 237 bits (604), Expect = 9e-62 Identities = 130/332 (39%), Positives = 188/332 (56%), Gaps = 7/332 (2%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFIS 314 E LL E+S RF++FPI+ P+ W +YKK + WTA+EVD+ D W+ + +R F Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEA-MPKPQREFYK 67 Query: 315 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 +LAFF +D IV+ENL + FM +++V E FY Q A E +HSE YS+ ++T I D+ Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGER-FAERIVAFACVEGIFFSGSFCAIFWLKK 671 E+ R+F I+ P +++ A W +W+D ER+V FA VEGI F F AI +LK+ Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKE 187 Query: 672 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVF-EIVSEAVDIEREFVCDA 848 + +MPGL NE ISRDEG+HC FAC L + E ++ +I+ EAV++ EF+ A Sbjct: 188 QNIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYA 247 Query: 849 LPCA---LVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISLQ--GKTNFF 1013 A + G + +++ QYI + D L + C +Y NPF M L KTNFF Sbjct: 248 FDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFF 307 Query: 1014 EKRVGEYQKASVMSNLNGGAATQHVFSIDEDF 1109 E R +YQ + A +F D+DF Sbjct: 308 ELRPTQYQNC-----VKDDAFAFKLFLNDDDF 334
>O84835:RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta - Chlamydia| trachomatis Length = 346 Score = 142 bits (358), Expect = 3e-33 Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 26/321 (8%) Frame = +3 Query: 171 MFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTT-LSNDERHFISHVLAFFAASDG 347 + PI++ WE Y A+ W E+ + D W + LS DER I L FF+ ++ Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAES 90 Query: 348 IVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDT 527 +V N+ V EAR + Q E +H+ + + E+ D+ E +F A + Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147 Query: 528 IPAVRRKADWALRW-------------IDGGERFAERIVAFACV-EGIFFSGSFCAIFWL 665 A++ K D+ + ++G + F + +V + + EGIFF F I Sbjct: 148 RAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSF 207 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDES----------RVFEIVSEA 815 ++ M G+ + I RDE +H +F D++ G +E+ + E++ A Sbjct: 208 HRQNKMIGIGEQYQYILRDETIHLNFGI---DLINGIKEENPEIWTPELQQEIVELIKRA 264 Query: 816 VDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWM-ELISL 992 VD+E E+ D LP ++G+ + Y++ +ADR L +G +Y+ NPF WM E I L Sbjct: 265 VDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDL 324 Query: 993 QGKTNFFEKRVGEYQKASVMS 1055 + NFFE RV EYQ A+ ++ Sbjct: 325 NKEKNFFETRVIEYQHAASLT 345
>Q9PL92:RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta - Chlamydia| muridarum Length = 346 Score = 141 bits (356), Expect = 5e-33 Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 26/321 (8%) Frame = +3 Query: 171 MFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTT-LSNDERHFISHVLAFFAASDG 347 + PI++ WE Y A+ W E+ + D W + LS DER I L FF+ ++ Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAES 90 Query: 348 IVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDT 527 +V N+ V EAR + Q E +H+ + + E+ D+ E +F A + Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147 Query: 528 IPAVRRKADWALRW-------------IDGGERFAERIVAFACV-EGIFFSGSFCAIFWL 665 +++ K D+ + ++G + F + +V + + EGIFF F I Sbjct: 148 RASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSF 207 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDES----------RVFEIVSEA 815 ++ M G+ + I RDE +H +F D++ G +E+ + E++ A Sbjct: 208 HRQNKMVGIGEQYQYILRDETIHLNFGV---DLINGIKEENPEIWTTELQQEIIEMIQRA 264 Query: 816 VDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWM-ELISL 992 VD+E ++ D LP ++G+ + Y++ +ADR L +G +Y+ NPF WM E I L Sbjct: 265 VDLEIDYARDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDL 324 Query: 993 QGKTNFFEKRVGEYQKASVMS 1055 + NFFE RV EYQ A+ ++ Sbjct: 325 NKEKNFFETRVTEYQHAASLT 345
>Q9Z6S4:RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta - Chlamydia| pneumoniae (Chlamydophila pneumoniae) Length = 346 Score = 135 bits (341), Expect = 3e-31 Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 26/321 (8%) Frame = +3 Query: 171 MFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTT-LSNDERHFISHVLAFFAASDG 347 + PI++ WE Y A+ W EV ++ D W + LS DER I L FF+ ++ Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90 Query: 348 IVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDT 527 +V N+ + EAR + Q E +H+ + + E+ D+ E +F A + Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147 Query: 528 IPAVRRKADW-------------ALRWIDGGERFAERIVAFACV-EGIFFSGSFCAIFWL 665 ++R K D+ +++ +G +F + +V + + EGIFF F I Sbjct: 148 RASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSF 207 Query: 666 KKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDES----------RVFEIVSEA 815 ++ M G+ + I RDE +H +F D++ G +E+ + ++ +A Sbjct: 208 HRQNKMTGIGEQYQYILRDETIHLNFGI---DLINGIKEENPEVWTTELQEEIVALIEKA 264 Query: 816 VDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWM-ELISL 992 V++E E+ D LP ++G+ + Y+ +ADR L +G +Y++ NPF WM E + L Sbjct: 265 VELEIEYAKDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYHSRNPFPWMSETMDL 324 Query: 993 QGKTNFFEKRVGEYQKASVMS 1055 + NFFE RV EYQ A +S Sbjct: 325 NKEKNFFETRVTEYQTAGNLS 345
>P50645:RIR2_PRVKA Ribonucleoside-diphosphate reductase small chain - Pseudorabies virus| (strain Kaplan) (PRV) Length = 303 Score = 129 bits (325), Expect = 2e-29 Identities = 92/279 (32%), Positives = 144/279 (51%), Gaps = 6/279 (2%) Frame = +3 Query: 216 AVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDVQV 395 +VA+ W ++ L DA+ LS E F + AF +A+D +V NL S Q Sbjct: 19 SVANRWLETDLPLGDDAKDV-AALSEPELEFYRFLFAFLSAADDLVNVNLGSLSELFTQ- 76 Query: 396 AEARAFYGFQIAIENIHSEMYSLLIETYIRDDVE-KDRLFRAIDTIPAVRRKADWALRWI 572 + +Y Q IE +HS +YS + R D ++R RA A+RRK +W + Sbjct: 77 KDILHYYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAIRRKVEWLDSRV 136 Query: 573 DGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 752 AE+ + +EGIFF+ SF +I +L+ L SN+ ISRDE +H +C Sbjct: 137 AECASVAEKYLLMILIEGIFFASSFASISYLRTHNLFVVTCQSNDFISRDEAIHTSASCC 196 Query: 753 LYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLL 923 +Y+ G + DE+R+ ++ +EAV+IE EF+ P + ++ + Y+ + ADRLL Sbjct: 197 IYNNYLGDAPRPDEARIHQLFAEAVEIECEFLRARAPRDSLLLDLPAIISYVRYSADRLL 256 Query: 924 MALGCNKLYNATNP-FDW-MELISLQGKTNFFEKRVGEY 1034 A+G + L+ A P D+ M L+ + TNFFE+R Y Sbjct: 257 QAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295
>Q01319:RIR2_BHV1C Ribonucleoside-diphosphate reductase small chain - Bovine herpesvirus| 1.1 (strain Cooper) (BoHV-1) (Infectious bovine rhinotracheitis virus) Length = 314 Score = 120 bits (302), Expect = 1e-26 Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 8/290 (2%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P + +VA+ W E L+ DA+ LS E F + AF +A+D +V NL Sbjct: 23 PDLDHLRSLSVANRWLETEFPLADDAKDV-ARLSGAELEFYRFLFAFLSAADDLVNVNLG 81 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD-VEKDRLFRAIDTIPAVRR 545 Q + +Y Q +IE +HS +YS + R+D V + PAVRR Sbjct: 82 DLSELFTQ-KDILHYYIEQESIEVVHSRVYSAIQLLLFRNDAVARAGYVEGALGDPAVRR 140 Query: 546 KADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 725 K DW R + E AE+ V +EGIFFS SF AI +L+ L +N+LISRDE Sbjct: 141 KVDWLERRVAAAESVAEKYVLMILIEGIFFSSSFAAIAYLRTHNLFVVTCQTNDLISRDE 200 Query: 726 GLHCDFACLLYDILRG--KLDESRVFEIVSEAVDIEREFVCDALPCALVG---MNGDLMS 890 +H +C ++D G + +R++E+ EA + CA G ++ + +S Sbjct: 201 AVHTAASCCIFDNYLGGERPPPARIYELFREAWKLS----ASLFGCAPRGSHILDVEAIS 256 Query: 891 QYIEFVADRLLMALGCNKLYNATNP-FDW-MELISLQGKTNFFEKRVGEY 1034 Y+E+ ADRLL A+ L+ P D+ + L++ + TNFFE+R Y Sbjct: 257 AYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTNY 306
>P28847:RIR2_EHV1B Ribonucleoside-diphosphate reductase small chain - Equine herpesvirus| 1 (strain Ab4p) (EHV-1) (Equine abortion virus) Length = 321 Score = 120 bits (300), Expect = 2e-26 Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 6/288 (2%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I +VA+ W ++ +S D + L+ ER F + AF +A+D +V NL Sbjct: 28 PDIEHLRSLSVANRWLDTDLPISDDLKDV-AKLTPAEREFYRFLFAFLSAADDLVNLNLG 86 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSLL-IETYIRDDVEKDRLFRAIDTIPAVRR 545 Q + +Y Q +IE HS +YS + + + D + R +I A+ R Sbjct: 87 DLSALFTQ-KDILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAAIGR 145 Query: 546 KADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 725 K W + AE+ + +EG+FF+ SF +I +L+ L SN+LISRDE Sbjct: 146 KVAWLQAKVRECGSVAEKYILMILIEGLFFASSFASIAYLRTHNLFVVTCQSNDLISRDE 205 Query: 726 GLHCDFACLLYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQY 896 +H +C +Y+ G K + R++E+ SEAV+IE EF+ P ++ + Y Sbjct: 206 AIHTRASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHLLDIGAIISY 265 Query: 897 IEFVADRLLMALGCNKLYNATNPFDWMEL--ISLQGKTNFFEKRVGEY 1034 + + ADRLL +G + L+NA P L ++++ TNFFE+R Y Sbjct: 266 VRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAY 313
>P09247:RIR2_VZVD Ribonucleoside-diphosphate reductase small chain - Varicella-zoster| virus (strain Dumas) (HHV-3) (Human herpesvirus 3) Length = 306 Score = 119 bits (298), Expect = 3e-26 Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 5/287 (1%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I ++++ W + + D ++ D L+ DE F + F +A+D +V NL Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDYQYLDC-LTEDELIFYRFIFTFLSAADDLVNVNLG 74 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTI--PAVR 542 S Q + +Y Q IE +H+ +YS + R D E R+ TI P+++ Sbjct: 75 SLTQLFSQ-KDIHHYYIEQECIEVVHARVYSQIQLMLFRGD-ESLRVQYVNVTINNPSIQ 132 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 +K W + AE+ + +EGIFF SF AI +L+ GL N+LISRD Sbjct: 133 QKVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRD 192 Query: 723 EGLHCDFACLLY-DILRGKLDESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQYI 899 E +H +C +Y + + K +R+ ++ SEAV+IE F+ P + +N D ++QY+ Sbjct: 193 EAIHTSASCCIYNNYVPEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYV 251 Query: 900 EFVADRLLMALGCNKLYNATNPFDWMELISL--QGKTNFFEKRVGEY 1034 +F ADRLL A+ KL+N P L + TNFFE+ Y Sbjct: 252 KFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERHSTSY 298
>P50644:RIR2_EHV4 Ribonucleoside-diphosphate reductase small chain - Equine herpesvirus| 4 (strain 1942) (EHV-4) (Equine rhinopneumonitis virus) Length = 320 Score = 117 bits (293), Expect = 1e-25 Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 6/288 (2%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I +VA+ W ++ +S D + L+ ER F + AF +A+D +V NL Sbjct: 27 PDIEHLRLLSVANRWLDTDLPISDDLKDV-AKLAPAEREFYRFLFAFLSAADDLVNLNLG 85 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSLL-IETYIRDDVEKDRLFRAIDTIPAVRR 545 Q + +Y Q +IE HS +YS + + + D + R ++ A+ Sbjct: 86 DLSALFTQ-KDILHYYIEQESIEVTHSRVYSAIQLMLFGNDATARARYVASVVKDVAIDL 144 Query: 546 KADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 725 K W + + AE+ + +EG+FF+ SF +I +L+ L SN+LISRDE Sbjct: 145 KVSWLQAKVRECKSVAEKYILMILIEGVFFASSFASIAYLRTHNLFVVTCQSNDLISRDE 204 Query: 726 GLHCDFACLLYDILRGKLDE---SRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQY 896 +H + +C +Y+ G ++ +R++ + SEAV+IE EF+ P + ++ + + Y Sbjct: 205 AIHTNASCCIYNNYLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKSSHLLDIEAIICY 264 Query: 897 IEFVADRLLMALGCNKLYNATNPFDWMEL--ISLQGKTNFFEKRVGEY 1034 + + ADRLL +G + L+NA P L ++++ TNFFE+R Y Sbjct: 265 VRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAY 312
>P69521:RIR2_HHV2H Ribonucleoside-diphosphate reductase small chain - Human herpesvirus| 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) Length = 337 Score = 116 bits (291), Expect = 2e-25 Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 11/298 (3%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I ++ + W E+ D + LS E F + AF +A+D +V ENL Sbjct: 41 PDINHLRSLSILNRWLETELVFVGDEEDV-SKLSEGELGFYRFLFAFLSAADDLVTENLG 99 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSL--LIETYIRDDVEKDRLFRAIDTIPAVR 542 + + +Y Q IE +HS +Y++ L+ + D + + R I+ PA+R Sbjct: 100 G-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVARTINH-PAIR 157 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 K DW + + E+ + +EG+FF+ SF AI +L+ L+ SN+LISRD Sbjct: 158 VKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRD 217 Query: 723 EGLHCDFACLLYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPC-ALVGMNGDL-- 884 E +H +C +Y+ G K + +RV+ + EAVDIE F+ P + + G L Sbjct: 218 EAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILSPGALAA 277 Query: 885 MSQYIEFVADRLLMALGCNKLYNATNP---FDWMELISLQGKTNFFEKRVGEYQKASV 1049 + Y+ F ADRLL + LY+A P F + L+S TNFFE R Y A V Sbjct: 278 IENYVRFSADRLLGLIHMQPLYSAPAPDASFP-LSLMSTDKHTNFFECRSTSYAGAVV 334
>P69520:RIR2_HHV23 Ribonucleoside-diphosphate reductase small chain - Human herpesvirus| 2 (strain 333) (HHV-2) (Human herpes simplex virus 2) Length = 337 Score = 116 bits (291), Expect = 2e-25 Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 11/298 (3%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I ++ + W E+ D + LS E F + AF +A+D +V ENL Sbjct: 41 PDINHLRSLSILNRWLETELVFVGDEEDV-SKLSEGELGFYRFLFAFLSAADDLVTENLG 99 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSL--LIETYIRDDVEKDRLFRAIDTIPAVR 542 + + +Y Q IE +HS +Y++ L+ + D + + R I+ PA+R Sbjct: 100 G-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVARTINH-PAIR 157 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 K DW + + E+ + +EG+FF+ SF AI +L+ L+ SN+LISRD Sbjct: 158 VKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRD 217 Query: 723 EGLHCDFACLLYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPC-ALVGMNGDL-- 884 E +H +C +Y+ G K + +RV+ + EAVDIE F+ P + + G L Sbjct: 218 EAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILSPGALAA 277 Query: 885 MSQYIEFVADRLLMALGCNKLYNATNP---FDWMELISLQGKTNFFEKRVGEYQKASV 1049 + Y+ F ADRLL + LY+A P F + L+S TNFFE R Y A V Sbjct: 278 IENYVRFSADRLLGLIHMQPLYSAPAPDASFP-LSLMSTDKHTNFFECRSTSYAGAVV 334
>P03175:RIR2_EBV Ribonucleoside-diphosphate reductase small chain - Epstein-Barr virus| (strain B95-8) (HHV-4) (Human herpesvirus 4) Length = 302 Score = 108 bits (271), Expect = 4e-23 Identities = 80/273 (29%), Positives = 132/273 (48%), Gaps = 5/273 (1%) Frame = +3 Query: 231 WTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARA 410 W A + L+ D L+ + F + F A ++ +V N+ ++ + + Sbjct: 25 WFAAHIVLTKDCGCLKL-LNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDH 82 Query: 411 FYGFQIAIENIHSEMYSLLIETYIRDD-VEKDRLFRAIDTIPAVRRKADWALRWIDGGER 587 +Y Q A+EN+H E Y+ ++ D + AI A++ K W + Sbjct: 83 YYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVT 142 Query: 588 FAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDIL 767 E+I+ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ + Sbjct: 143 LPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSM 202 Query: 768 RGKLDESR---VFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLMALGC 938 K D R + E+ AV++E F+ +A + ++ + Q++E ADR+L +G Sbjct: 203 TAKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQ 261 Query: 939 NKLYNATNPFDW-MELISLQGKTNFFEKRVGEY 1034 LY P D + ++ +TNFFE+ +Y Sbjct: 262 APLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
>P10224:RIR2_HHV11 Ribonucleoside-diphosphate reductase small chain - Human herpesvirus| 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) Length = 340 Score = 107 bits (268), Expect = 8e-23 Identities = 89/298 (29%), Positives = 137/298 (45%), Gaps = 11/298 (3%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I ++ + W E+ D + LS E F + AF +A+D +V ENL Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDV-SKLSEGELSFYRFLFAFLSAADDLVTENLG 102 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSL--LIETYIRDDVEKDRLFRAIDTIPAVR 542 + + +Y Q IE +HS +Y++ L+ + D ++ + I+ PA+R Sbjct: 103 G-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINH-PAIR 160 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 K DW + E+ + +EGIFF+ SF AI +L+ L+ SN+LISRD Sbjct: 161 AKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRD 220 Query: 723 EGLHCDFACLLYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPC---ALVGMNGDL 884 E +H +C +Y+ G K RV+ + +AV+IE F+ P L Sbjct: 221 EAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAA 280 Query: 885 MSQYIEFVADRLLMALGCNKLYNATNP---FDWMELISLQGKTNFFEKRVGEYQKASV 1049 + Y+ F ADRLL + L++A P F + L+S TNFFE R Y A V Sbjct: 281 IENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRSTSYAGAVV 337
>P06474:RIR2_HHV1K Ribonucleoside-diphosphate reductase small chain - Human herpesvirus| 1 (strain KOS) (HHV-1) (Human herpes simplex virus 1) Length = 340 Score = 106 bits (264), Expect = 2e-22 Identities = 89/298 (29%), Positives = 136/298 (45%), Gaps = 11/298 (3%) Frame = +3 Query: 189 PQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLA 368 P I ++ + W E+ D + LS E F + AF +A+D +V ENL Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDV-SKLSEGELSFYRFLFAFLSAADDLVTENLG 102 Query: 369 SRFMSDVQVAEARAFYGFQIAIENIHSEMYSL--LIETYIRDDVEKDRLFRAIDTIPAVR 542 + + +Y Q IE HS +Y++ L+ + D ++ + I+ PA+R Sbjct: 103 G-LSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINH-PAIR 160 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 K DW + E+ + +EGIFF+ SF AI +L+ L+ SN+LISRD Sbjct: 161 AKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRD 220 Query: 723 EGLHCDFACLLYDILRG---KLDESRVFEIVSEAVDIEREFVCDALPC---ALVGMNGDL 884 E +H +C +Y+ G K RV+ + +AV+IE F+ P L Sbjct: 221 EAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAA 280 Query: 885 MSQYIEFVADRLLMALGCNKLYNATNP---FDWMELISLQGKTNFFEKRVGEYQKASV 1049 + Y+ F ADRLL + L++A P F + L+S TNFFE R Y A V Sbjct: 281 IENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRSTSYAGAVV 337
>Q01038:RIR2_SHV21 Ribonucleoside-diphosphate reductase small chain - Saimiriine| herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) Length = 305 Score = 105 bits (262), Expect = 4e-22 Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 8/286 (2%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIV---LENLAS 371 E K+ + W +V L D D L+ + F + F ++ +V +E+L S Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDM-LNERDLEFYKFLFTFLGMAEKLVNINIEDLLS 76 Query: 372 RFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRA-IDTIPAVRRK 548 +F S + +Y Q+A+ENIH ++Y+ ++ ++++ + + I A++ K Sbjct: 77 QFDSH----DISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEK 132 Query: 549 ADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 728 W + AE+I+ F VEGIFF SF +I + RG+M G+ +N+ I+RDE Sbjct: 133 LRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEM 192 Query: 729 LHCDFACLLYDILRGKLD---ESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQYI 899 LH A LLY+ + + E ++++ EAV++E +F+ A + +N + Q++ Sbjct: 193 LHTSAAALLYNTMTKSSERPSEDWIYKLFREAVEVEFKFIA-AKGYGVSLVNVHEIRQFL 251 Query: 900 EFVADRLLMALGCNKLYNATNPFDW-MELISLQGKTNFFEKRVGEY 1034 + ADR+L ++ N +Y + P + + S NFFE+ +Y Sbjct: 252 QATADRILESINLNPIYGSLPPENCPLAYTSSTKSVNFFERDNSDY 297
>Q9ZKC3:RIR2_HELPJ Ribonucleoside-diphosphate reductase subunit beta - Helicobacter| pylori J99 (Campylobacter pylori J99) Length = 341 Score = 95.9 bits (237), Expect = 3e-19 Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 15/310 (4%) Frame = +3 Query: 165 FSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASD 344 F + I++ +K +A+ W AEEV ++ D R + LS +E+ LA D Sbjct: 31 FDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDY-LKLSAEEKIGYDRALAQLIFMD 89 Query: 345 GIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAID 524 + NL + E Q E +HS Y++++E+ + E ++R Sbjct: 90 SLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWR--- 146 Query: 525 TIPAVRRKADWA------LRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMP 686 ++ K D+ L E + + A +EGI+F F + L + G M Sbjct: 147 NDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARSGKML 206 Query: 687 GLTFSNELISRDEGLHCDFACLLYDILRGKLDE-------SRVFEIVSEAVDIEREFVCD 845 G I RDE H + + LR + + + V E+ +AV+IE + Sbjct: 207 GSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDY 266 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISL--QGKTNFFEK 1019 ++G+ L+ QYI+F+AD L +G K+Y +P W+E S + ++NFFE Sbjct: 267 ITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQHPIKWVESFSSFNEQRSNFFEA 326 Query: 1020 RVGEYQKASV 1049 RV Y K SV Sbjct: 327 RVSNYAKGSV 336
>Q9KFH7:RIR2_BACHD Ribonucleoside-diphosphate reductase subunit beta - Bacillus| halodurans Length = 345 Score = 95.9 bits (237), Expect = 3e-19 Identities = 81/324 (25%), Positives = 150/324 (46%), Gaps = 22/324 (6%) Frame = +3 Query: 141 LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHV 320 L +SS+ + +RF + YK +A+FWT E+++S DA+ + TL+ E+ + Sbjct: 22 LNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQF-PTLTETEQEAFKKI 80 Query: 321 LAFFAASDGIVLE--NLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDV 494 + A D + + A+ +++D +A + FQ E +H++ YS ++ + + Sbjct: 81 IGLLAFLDSVQTDYSMRAAEYLTDSSLAALMSVLSFQ---EVVHNQSYSYVLSSLV-PKA 136 Query: 495 EKDRLFRAIDTIPAVRRKADWALRWIDGGERFA---------ERIVAFACVEGIFFSGSF 647 +D +F ++ + ++ IDG E+F E IV +EG+ F F Sbjct: 137 TQDEIFEYWKHDDVLKERNEFI---IDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGF 193 Query: 648 CAIFWLKKRGLMPGLTFSNELISRDEGLHC-----DFACLLYDILRGKLDESRVF--EIV 806 + L + M + I+RDE LH F LL + +E++ F + Sbjct: 194 AFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTL 253 Query: 807 SEAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNAT--NPFDWME 980 +A D+E+++ + + G+N + M YI F+A++ + LG K Y NP W+ Sbjct: 254 MKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIR 313 Query: 981 LIS--LQGKTNFFEKRVGEYQKAS 1046 GK++FFE++ +Y K S Sbjct: 314 AYEDVNSGKSDFFEQKSRQYAKVS 337
>P55983:RIR2_HELPY Ribonucleoside-diphosphate reductase subunit beta - Helicobacter| pylori (Campylobacter pylori) Length = 341 Score = 92.0 bits (227), Expect = 5e-18 Identities = 80/310 (25%), Positives = 134/310 (43%), Gaps = 15/310 (4%) Frame = +3 Query: 165 FSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASD 344 F + I++ +K +A+ W AEEV ++ D R + LS +E+ LA D Sbjct: 31 FDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDY-LKLSAEEKIGYDRALAQLIFMD 89 Query: 345 GIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAID 524 + NL + E Q E +HS Y++++E+ + E ++R Sbjct: 90 SLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWR--- 146 Query: 525 TIPAVRRKADWA------LRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMP 686 ++ K D+ L E + + A +EGI+F F + L + G M Sbjct: 147 NDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARSGKML 206 Query: 687 GLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSE-------AVDIEREFVCD 845 G I RDE H + + LR + + ++++E AV+IE + Sbjct: 207 GSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDY 266 Query: 846 ALPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNATNPFDWMELISL--QGKTNFFEK 1019 ++G+ L+ QYI+F+AD L +G K+Y +P W+E S + ++NFFE Sbjct: 267 ITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQHPIKWVESFSSFNEQRSNFFEA 326 Query: 1020 RVGEYQKASV 1049 RV Y K SV Sbjct: 327 RVSNYAKGSV 336
>O83092:RIR2_TREPA Ribonucleoside-diphosphate reductase subunit beta - Treponema| pallidum Length = 351 Score = 79.0 bits (193), Expect = 4e-14 Identities = 75/314 (23%), Positives = 142/314 (45%), Gaps = 23/314 (7%) Frame = +3 Query: 180 IRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLE 359 +++P + ++Y++A+ +FW EE+++SSD + + LS E+ +L+F D I Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDY-RNLSAIEKTAYDKILSFLIFLDSIQTA 99 Query: 360 NLAS--RFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIP 533 NL + ++++ ++ FQ E +HS+ YS +++T + D L++ D Sbjct: 100 NLPNIGQYITANEINLCLTIQAFQ---EAVHSQSYSYMLDTICSPEERNDILYQWKDDEH 156 Query: 534 AVRRK---ADWALRWIDGGERFAERIVAFA--CVEGIFFSGSFCAIFWLKKRGLMPGLTF 698 + R + + D A VA A +EGI+F F + L + MPG Sbjct: 157 LLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQ 216 Query: 699 SNELISRDEGLHC-DFACLLYDILRGKLDESRVF---------EIVSEAVDIEREFVCDA 848 I+RDE H F ++ ++ + +E +VF +++ E + E ++ Sbjct: 217 EIRYINRDENTHLWLFRSIIQELQK---EEPQVFTARNVRLFRDMIREGCEQEIKWGDYV 273 Query: 849 LPCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNA----TNPFDWMELISLQG--KTNF 1010 + + G+N +++ YI ++ + LG LY W+ S KT+F Sbjct: 274 IGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDF 333 Query: 1011 FEKRVGEYQKASVM 1052 FE + Y K+S M Sbjct: 334 FEAKSTAYAKSSAM 347
>Q8K9W4:RIR2_BUCAP Ribonucleoside-diphosphate reductase subunit beta - Buchnera| aphidicola subsp. Schizaphis graminum Length = 376 Score = 70.9 bits (172), Expect = 1e-11 Identities = 82/324 (25%), Positives = 139/324 (42%), Gaps = 42/324 (12%) Frame = +3 Query: 132 EEPLLAESSDRFSMFPIRFPQIWE-FYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHF 308 +EP+ S + + + I+E +K ++ FW EE+DLS D +D SN++ F Sbjct: 15 KEPMFFGQSVNIARYDQQKYNIFEKLIEKQLSFFWRPEEIDLSKDRIDFDNLPSNEKHIF 74 Query: 309 ISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR- 485 IS+ L + D I + F+ V + E + E IHS Y+ +I I Sbjct: 75 ISN-LKYQTLLDSIQGRSPNIAFLPIVSIPELETWIETWSFSETIHSRSYTHIIRNIINN 133 Query: 486 -----DDV--EKDRLFRAIDTI----PAVRRKADWALRWIDGGERFAER----------- 599 DD+ K+ RA D +R A W L +G + E+ Sbjct: 134 PSIVFDDIISNKNINDRAQDISIYYDELIRITAYWHLLG-EGNHKINEKKVEINLKLLKR 192 Query: 600 -----IVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDI 764 +++ +E I F SF F +R +M G LI+RDE LH + +I Sbjct: 193 RLYLCLISVNVLEAIRFYVSFACSFAFAEREIMEGNAKIIRLIARDEALHLTGTQHILNI 252 Query: 765 LRGKLD----ESRVFEIVSEAVDI-------EREFVCDAL-PCALVGMNGDLMSQYIEFV 908 L + + ++ V E EA+ I E+++ +++G+N D++ QYIE++ Sbjct: 253 LNNEKNNENMKNTVLECREEAIKIFISASEQEKKWAKYLFQDGSMLGLNKDILCQYIEYI 312 Query: 909 ADRLLMALGCNKLYNAT-NPFDWM 977 + + A+G + T NP W+ Sbjct: 313 TNIRMHAIGFKMPFEKTSNPIPWI 336
>Q9CBQ2:RIR2_MYCLE Ribonucleoside-diphosphate reductase subunit beta - Mycobacterium| leprae Length = 325 Score = 69.3 bits (168), Expect = 3e-11 Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFM 380 E + + +FW E+V +S+D W T L+ E+ V D I A + Sbjct: 27 EVWDRLTGNFWLPEKVPVSNDLPSWGT-LTASEKQLTMRVFTGLTLLDTIQGTVGAVSLI 85 Query: 381 SDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADWA 560 D A Y +E++H++ YS + T + E D FR + ++RKA Sbjct: 86 PDALTPHEEAVYTNIAFMESVHAKSYSSIFST-LCSTAEIDEAFRWSEENNNLQRKAKIV 144 Query: 561 LRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 740 + + G E ++ + +F+SG + ++W R + LI RDE +H Sbjct: 145 MEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVHGY 203 Query: 741 F--------ACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQY 896 + L+ D R +L E +E++ E D E E+ D VG+ D + ++ Sbjct: 204 YIGYKFQRGLVLVDDARRAELKE-YTYELLFELYDNEVEYTQDLYD--RVGLTED-VKKF 259 Query: 897 IEFVADRLLMALGCNKLY 950 + + A++ LM LG L+ Sbjct: 260 LRYNANKALMNLGYEALF 277
>P20560:YVFB_VACCC Hypothetical 8.3 kDa protein - Vaccinia virus (strain Copenhagen)| (VACV) Length = 78 Score = 68.9 bits (167), Expect = 4e-11 Identities = 38/73 (52%), Positives = 43/73 (58%) Frame = -2 Query: 823 MSTASETISKTXXXXXXXXXXXXXRQAKSQCRPSSREMSSLEKVRPGMSPRFFSQKMAQK 644 M TAS I T + AKSQCRPSS +SSLE V PG+ PRF SQ M Sbjct: 1 MDTASVIIDLTVSSLGGYNKCLNIKHAKSQCRPSSLLISSLENVSPGIRPRFLSQNMEAN 60 Query: 643 EPEKKMPSTQAKA 605 +PEKK+PST AKA Sbjct: 61 DPEKKIPSTAAKA 73
>P37427:RIR2_SALTY Ribonucleoside-diphosphate reductase 1 subunit beta - Salmonella| typhimurium Length = 376 Score = 65.9 bits (159), Expect = 4e-10 Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 44/300 (14%) Frame = +3 Query: 210 KKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDV 389 +K ++ FW EEVD+S D + +++ FIS+ L + D I + + + Sbjct: 42 EKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN-LKYQTLLDSIQGRSPNVALLPLI 100 Query: 390 QVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADWALRW 569 + E + E IHS Y+ +I + D +F I T ++++A+ + Sbjct: 101 SIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAV---VFDDIVTNEQIQKRAEGISAY 157 Query: 570 IDG-----------GE-------------------RFAERIVAFACVEGIFFSGSFCAIF 659 D GE + +++ +E I F SF F Sbjct: 158 YDELIEMTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Query: 660 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSE--------- 812 +R LM G LI+RDE LH + ++LR +D+ + EI E Sbjct: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLF 277 Query: 813 --AVDIEREFVCDAL--PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNA-TNPFDWM 977 A E+E+ D L +++G+N D++ QY+E++ + + A+G + + +NP W+ Sbjct: 278 VQAAQQEKEW-ADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336
>P57275:RIR2_BUCAI Ribonucleoside-diphosphate reductase subunit beta - Buchnera| aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 376 Score = 64.7 bits (156), Expect = 8e-10 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 40/299 (13%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFM 380 + +K ++ FW EE+DLS D + N++ FIS+ L + D I + F+ Sbjct: 39 QLIEKQLSFFWRPEEIDLSRDRIDFQNLPDNEKHIFISN-LKYQTLLDSIQGRSPNIAFL 97 Query: 381 SDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR-------DDVEKDRLFRAIDTIPA- 536 + + E + E IHS Y+ +I + D + ++ I Sbjct: 98 PIISIPELETWIETWSFSETIHSRSYTHIIRNIVNCPSLVFDDIISNKNIYDRAQNISIY 157 Query: 537 ----VRRKADWAL-----RWIDGGE-----RFAER-----IVAFACVEGIFFSGSFCAIF 659 + + W L I+G + RF ++ +++ +E I F SF F Sbjct: 158 YDELINLTSYWHLLGEGIHLINGKKIHINLRFLKKRLYLCLISVNVLEAIRFYVSFACSF 217 Query: 660 WLKKRGLMPGLTFSNELISRDEGLHC----DFACLLYDILRGKLDESRVFEIVSEAVDI- 824 +R LM G LI+RDE LH LL +I + E V E EA++I Sbjct: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIF 277 Query: 825 ------EREFVCDALPC-ALVGMNGDLMSQYIEFVADRLLMALGCNKLY-NATNPFDWM 977 E+++ +++G+N D++ QYIE++ + + A+G + +NP W+ Sbjct: 278 ISAAQQEKKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWI 336
>P69924:RIR2_ECOLI Ribonucleoside-diphosphate reductase 1 subunit beta - Escherichia| coli Length = 376 Score = 63.5 bits (153), Expect = 2e-09 Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 44/300 (14%) Frame = +3 Query: 210 KKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDV 389 +K ++ FW EEVD+S D + +++ FIS+ L + D I + + + Sbjct: 42 EKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN-LKYQTLLDSIQGRSPNVALLPLI 100 Query: 390 QVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADWALRW 569 + E + E IHS Y+ +I + D +F I T ++++A+ + Sbjct: 101 SIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSY 157 Query: 570 IDG-----------GE-------------------RFAERIVAFACVEGIFFSGSFCAIF 659 D GE + +++ +E I F SF F Sbjct: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Query: 660 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSE--------- 812 +R LM G LI+RDE LH + ++LR D+ + EI E Sbjct: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 Query: 813 --AVDIEREFVCDAL--PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNA-TNPFDWM 977 A E+++ D L +++G+N D++ QY+E++ + + A+G + + +NP W+ Sbjct: 278 VQAAQQEKDW-ADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336
>P69925:RIR2_ECO57 Ribonucleoside-diphosphate reductase 1 subunit beta - Escherichia| coli O157:H7 Length = 376 Score = 63.5 bits (153), Expect = 2e-09 Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 44/300 (14%) Frame = +3 Query: 210 KKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDV 389 +K ++ FW EEVD+S D + +++ FIS+ L + D I + + + Sbjct: 42 EKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN-LKYQTLLDSIQGRSPNVALLPLI 100 Query: 390 QVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADWALRW 569 + E + E IHS Y+ +I + D +F I T ++++A+ + Sbjct: 101 SIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSY 157 Query: 570 IDG-----------GE-------------------RFAERIVAFACVEGIFFSGSFCAIF 659 D GE + +++ +E I F SF F Sbjct: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Query: 660 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIVSE--------- 812 +R LM G LI+RDE LH + ++LR D+ + EI E Sbjct: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 Query: 813 --AVDIEREFVCDAL--PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNA-TNPFDWM 977 A E+++ D L +++G+N D++ QY+E++ + + A+G + + +NP W+ Sbjct: 278 VQAAQQEKDW-ADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336
>P43755:RIR2_HAEIN Ribonucleoside-diphosphate reductase subunit beta - Haemophilus| influenzae Length = 376 Score = 58.9 bits (141), Expect = 4e-08 Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 40/296 (13%) Frame = +3 Query: 210 KKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDV 389 +K ++ FW EEVD+S D + L E+H L + D I + + V Sbjct: 42 EKQLSFFWRPEEVDVSQDRIDY-AALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLV 100 Query: 390 QVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD-------VEKDRLFRAIDTIPA---- 536 + E + E IHS Y+ +I + D V + + + I + Sbjct: 101 SIPELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDD 160 Query: 537 -VRRKADWALRW-----IDGGE-----RFAER-----IVAFACVEGIFFSGSFCAIFWLK 668 +R + L +DG E R ++ +++ +E I F SF F Sbjct: 161 LIRDSQLYGLYGEGTYTVDGKECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFA 220 Query: 669 KRGLMPGLTFSNELISRDEGLHCDFACLLYDILRGKLDESRVFEIV----SEAVDI---- 824 +R LM G + I+RDE LH + +I+ D+ + EI EA D+ Sbjct: 221 ERRLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAA 280 Query: 825 --EREFVCDAL--PCALVGMNGDLMSQYIEFVADRLLMALGCNKLYNA-TNPFDWM 977 + + D L +++G+N D++ QY+E++ + + A+G + +NP W+ Sbjct: 281 AEQEKAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWI 336
>P17424:RIR4_SALTY Ribonucleoside-diphosphate reductase 2 subunit beta - Salmonella| typhimurium Length = 319 Score = 57.8 bits (138), Expect = 1e-07 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 7/257 (2%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFM 380 E + + ++FW E+V LS+D W TLS E+ V D I A M Sbjct: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQ-TLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLM 79 Query: 381 SDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADWA 560 +D A +E +H+ YS + T + E D + + P ++RKA Sbjct: 80 ADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK-EVDAAYAWSEENPPLQRKAQII 138 Query: 561 LRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 740 L E ++I + +F+SG F + RG + LI RDE +H Sbjct: 139 LAHYVSDEPLKKKIASVFLESFLFYSG-FWLPMYFSSRGKLTNTADLIRLIIRDEAVHGY 197 Query: 741 FACLLYDILRGKL-----DESRVF--EIVSEAVDIEREFVCDALPCALVGMNGDLMSQYI 899 + Y I KL +E ++F +++ E D E + +AL A G D+ + ++ Sbjct: 198 YIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYT-EAL-YAETGWVNDVKA-FL 254 Query: 900 EFVADRLLMALGCNKLY 950 + A++ LM LG L+ Sbjct: 255 CYNANKALMNLGYEALF 271
>Q10840:RIR2_MYCTU Ribonucleoside-diphosphate reductase subunit beta - Mycobacterium| tuberculosis Length = 322 Score = 57.8 bits (138), Expect = 1e-07 Identities = 53/220 (24%), Positives = 91/220 (41%) Frame = +3 Query: 192 QIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLAS 371 Q+WE + +FW E++ LS+D W TLS+ E+ V D A Sbjct: 24 QVWE---RLTGNFWLPEKIPLSNDLASWQ-TLSSTEQQTTIRVFTGLTLLDTAQATVGAV 79 Query: 372 RFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKA 551 + D A +E++H++ YS + T + + D F + P ++RKA Sbjct: 80 AMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFST-LCSTKQIDDAFDWSEQNPYLQRKA 138 Query: 552 DWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 731 + + G + + + +F+SG + ++W RG + LI RDE + Sbjct: 139 QIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYW-SSRGKLTNTADLIRLIIRDEAV 197 Query: 732 HCDFACLLYDILRGKLDESRVFEIVSEAVDIEREFVCDAL 851 H + + Y RG D + +E D RE+ C+ L Sbjct: 198 HGYY--IGYKCQRGLADLTD-----AERAD-HREYTCELL 229
>P50621:RIR2_BACSU Ribonucleoside-diphosphate reductase subunit beta - Bacillus subtilis| Length = 329 Score = 57.8 bits (138), Expect = 1e-07 Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 16/298 (5%) Frame = +3 Query: 204 FYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMS 383 FY + V FW EE+ L+ D W L +E+ VLA D Sbjct: 21 FYNQNVKQFWLPEEIALNGDLLTW-KYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAE 79 Query: 384 DVQVAEARAFYGFQIAIEN-IHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKADW- 557 V + +A F +EN +H++ YS + T + + +F + +++KA Sbjct: 80 HVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINE-VFEWVKQNKYLQKKAQMI 138 Query: 558 -----ALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 A++ D F + + +F+SG + +++ + LM N LI RD Sbjct: 139 VGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIIN-LILRD 197 Query: 723 EGLHCDFACLLYDILRGKLDESRVFEIVSEAVDI-------EREFVCDALPCALVGMNGD 881 E +H + LL + K E + E+ A+D+ E E+ D VG++ D Sbjct: 198 EAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYD--QVGLSHD 255 Query: 882 LMSQYIEFVADRLLMALGCNKLYNA--TNPFDWMELISLQGKTNFFEKRVGEYQKASV 1049 + ++I + A++ LM LG + + NP L + +FF + Y+KA+V Sbjct: 256 -VKKFIRYNANKALMNLGFDPYFEEEDINPIVLNGLNTKTKSHDFFSMKGNGYKKATV 312
>Q89AS5:RIR2_BUCBP Ribonucleoside-diphosphate reductase subunit beta - Buchnera| aphidicola subsp. Baizongia pistaciae Length = 376 Score = 57.0 bits (136), Expect = 2e-07 Identities = 84/355 (23%), Positives = 141/355 (39%), Gaps = 45/355 (12%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWE-FYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EP+ S S + + +I+E +K ++ FW EEVDLS D + +++ F+ Sbjct: 16 EPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDYIDFQNLPQHEKHIFV 75 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR-- 485 S+ L + D I + + V + E + E IHS Y+ +I I Sbjct: 76 SN-LKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINTP 134 Query: 486 ----DDV--EKDRLFRAIDTIPAVRRKADWALRWIDGGE-------------------RF 590 DD+ K+ RA D + W GE + Sbjct: 135 SLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTINGKKIKIDLHELKKKL 194 Query: 591 AERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDIL- 767 +++ +E I F SF F +R M G LI+RDE LH + +IL Sbjct: 195 YLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEALHLTSTQHILNILH 254 Query: 768 -----RGKLDESR--------VFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQYIEFV 908 G D S+ +F VS+ I +++ +++G+N +++SQYIE++ Sbjct: 255 NDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQ--NGSMLGLNQEILSQYIEYI 312 Query: 909 ADRLLMALGCNKLYN-ATNPFDWME--LISLQGKTNFFEKRVGEYQKASVMSNLN 1064 + + A+G + +NP W+ LIS + E V Y + S +N Sbjct: 313 TNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIGQINSEIN 367
>O67475:RIR2_AQUAE Ribonucleoside-diphosphate reductase subunit beta - Aquifex| aeolicus Length = 696 Score = 56.2 bits (134), Expect = 3e-07 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%) Frame = +3 Query: 165 FSMFPIRFPQIWEFYK-KAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAAS 341 F + I++ ++ YK +FW EE+ + D + ++T LS+ E+ VL+F A Sbjct: 37 FELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDYEKRAYELVLSFLIAL 96 Query: 342 DGIVLENLA--SRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLF- 512 D ++ L R ++ +V A FQ E++H+ Y ++E+ + D V+ D ++ Sbjct: 97 DSFQVDMLKEFGRMITAPEVEMAITAQEFQ---ESVHAYSYQFILESVV-DPVKADEIYN 152 Query: 513 ------RAIDTIPAVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKR 674 R ++ + + +R E F + + +E ++F F + L ++ Sbjct: 153 YWREDERLLERNKVIAELYNEFIR-KPNEENFIKATIGNYILESLYFYSGFAFFYTLGRQ 211 Query: 675 GLMPGLTFSNELISRDE 725 G M + I+RDE Sbjct: 212 GKMRNTVQQIKYINRDE 228 Score = 32.7 bits (73), Expect = 3.5 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +3 Query: 861 LVGMNGDLMSQYIEFVADRLLMALGCNKLYN--ATNPFDWMELISL--QGKTNFFEKRVG 1028 ++G+N L+ +YI+++ + + +G + +Y NP W++ KT+FF+ + Sbjct: 627 ILGINDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQ 686 Query: 1029 EYQKAS 1046 Y KA+ Sbjct: 687 TYSKAN 692
>Q9XC20:RIR2_MYCGA Ribonucleoside-diphosphate reductase subunit beta - Mycoplasma| gallisepticum Length = 339 Score = 52.4 bits (124), Expect = 4e-06 Identities = 47/229 (20%), Positives = 101/229 (44%), Gaps = 9/229 (3%) Frame = +3 Query: 180 IRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGI--V 353 I P+ E + + +FW E++ +S+D + W+ L+ + + ++ D I Sbjct: 34 INDPKDLEVWTRVTQNFWLPEKIPVSNDLKSWNE-LTPEWKQLVTRTFTGLTLLDTIQCT 92 Query: 354 LENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIP 533 L ++A + + + E + F + +H+ Y + T D E + + Sbjct: 93 LGDIA-QIPNSLTDHEQFVYANFSFMV-GVHARSYGTIFSTLNTSD-EIEEAHEWVINNE 149 Query: 534 AVRRKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 713 ++ +A + + + + +I A A + G G F F+L RG +P + LI Sbjct: 150 KLQARAKFLVPYYTSDDPLKSKIAA-ALMPGFLLYGGFYLPFYLAARGKLPNTSDIIRLI 208 Query: 714 SRDEGLHCDFACLLYDILRGKLDESR-------VFEIVSEAVDIEREFV 839 RD+ +H ++ Y + KL + + VFEI+ + +++E++F+ Sbjct: 209 LRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILYKLIELEKDFL 257
>P37146:RIR4_ECOLI Ribonucleoside-diphosphate reductase 2 subunit beta - Escherichia| coli Length = 319 Score = 49.7 bits (117), Expect = 3e-05 Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 9/261 (3%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENL--ASR 374 E + + ++FW E+V LS+D W TL+ E+ V D L+N+ A Sbjct: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLD--TLQNVIGAPS 77 Query: 375 FMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVRRKAD 554 M D A +E +H+ YS + T + + D + + ++RKA Sbjct: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK-DVDAAYAWSEENAPLQRKAQ 136 Query: 555 WALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 734 + G + ++I + +F+SG F + RG + LI RDE +H Sbjct: 137 IIQQHYRGDDPLKKKIASVFLESFLFYSG-FWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 Query: 735 CDFACLLYD-----ILRGKLDE--SRVFEIVSEAVDIEREFVCDALPCALVGMNGDLMSQ 893 + Y I G+ +E S F+++ E D E ++ D L D + Sbjct: 196 GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT-DELYAETPW--ADDVKA 252 Query: 894 YIEFVADRLLMALGCNKLYNA 956 ++ + A++ LM LG L+ A Sbjct: 253 FLCYNANKALMNLGYEPLFPA 273
>P47471:RIR2_MYCGE Ribonucleoside-diphosphate reductase subunit beta - Mycoplasma| genitalium Length = 340 Score = 47.0 bits (110), Expect = 2e-04 Identities = 43/226 (19%), Positives = 97/226 (42%), Gaps = 13/226 (5%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFM 380 E + + V +FW E++ +S+D W LS D + I+ G+ L + + Sbjct: 42 EVWNRIVQNFWLPEKIPVSNDIPSWKK-LSKDWQDLITKTFT------GLTLLDTIQATI 94 Query: 381 SDV-QVAEA-----RAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVR 542 D+ Q+ A + Y + +H+ Y + T + + + + +++ Sbjct: 95 GDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSE-QINAAHEWVVNTESLQ 153 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 ++A + + G + ++ A A + G G F F+L R +P + LI RD Sbjct: 154 KRAKALIPYYTGNDPLKSKVAA-ALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRD 212 Query: 723 EGLHCDFACLLYD-------ILRGKLDESRVFEIVSEAVDIEREFV 839 + +H ++ Y + + K ++ VFE++ +++E++++ Sbjct: 213 KVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYL 258
>P75461:RIR2_MYCPN Ribonucleoside-diphosphate reductase subunit beta - Mycoplasma| pneumoniae Length = 339 Score = 41.6 bits (96), Expect = 0.007 Identities = 40/226 (17%), Positives = 94/226 (41%), Gaps = 13/226 (5%) Frame = +3 Query: 201 EFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFM 380 E + + +FW E++ +S+D W LS + + I+ G+ L + + Sbjct: 41 EVWNRITQNFWLPEKIPVSNDIPSWKQ-LSKEWQDLITKTFT------GLTLLDTIQATI 93 Query: 381 SDVQVAEARAFYGFQIAIEN------IHSEMYSLLIETYIRDDVEKDRLFRAIDTIPAVR 542 D++ + Q+ N +H+ Y + T + + + T +++ Sbjct: 94 GDIKQIDYALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQITEAHEWVVKT-ESLQ 152 Query: 543 RKADWALRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 722 ++A + + G + ++ A A + G G F F+L R +P + LI RD Sbjct: 153 KRAKALIPYYTGKDPLKSKVAA-ALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRD 211 Query: 723 EGLHCDFACLLYDILRGKLDESR-------VFEIVSEAVDIEREFV 839 + +H ++ + K+ + + VF+++ E +++E+ ++ Sbjct: 212 KVIHNYYSGYKFQRKVEKMSKEKQAEMKRFVFDLMYELIELEKAYL 257
>Q8G2Y6:GRPE_BRUSU Protein grpE - Brucella suis| Length = 230 Score = 35.4 bits (80), Expect = 0.53 Identities = 30/87 (34%), Positives = 40/87 (45%) Frame = +3 Query: 354 LENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIP 533 +ENL R DVQ +ARA+ AI N +M S+ D L RA+D IP Sbjct: 83 MENLRKRTQRDVQ--DARAY-----AITNFARDMLSV-----------SDNLRRALDAIP 124 Query: 534 AVRRKADWALRWIDGGERFAERIVAFA 614 A +AD L+ + G ER + A Sbjct: 125 ADALEADSNLKSLSEGVEMTERAMLLA 151
>Q8YEV0:GRPE_BRUME Protein grpE - Brucella melitensis| Length = 226 Score = 35.4 bits (80), Expect = 0.53 Identities = 30/87 (34%), Positives = 40/87 (45%) Frame = +3 Query: 354 LENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDDVEKDRLFRAIDTIP 533 +ENL R DVQ +ARA+ AI N +M S+ D L RA+D IP Sbjct: 79 MENLRKRTQRDVQ--DARAY-----AITNFARDMLSV-----------SDNLRRALDAIP 120 Query: 534 AVRRKADWALRWIDGGERFAERIVAFA 614 A +AD L+ + G ER + A Sbjct: 121 ADALEADSNLKSLSEGVEMTERAMLLA 147
>Q01846:MDM1_YEAST Structural protein MDM1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1127 Score = 33.5 bits (75), Expect = 2.0 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 13/142 (9%) Frame = +3 Query: 246 VDLSSDARHWDTTLSNDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQ 425 VDL S + DERHF + F + + ++ + F+S + +A A + Sbjct: 937 VDLQSSEDGGELNFYEDERHFFTDSGYPFYSQNKSFVKQICDLFISLFALNKANAGWLRG 996 Query: 426 IAIENIHSEMYSLLIETYIRDDVEK----DRLFRAIDTIPAV---------RRKADWALR 566 AI + ++ IE YI+ ++K D++F AI T + R++ + A Sbjct: 997 RAIITVLQQLLGSTIEKYIKVSIQKLRSEDQVFEAIVTFKNMLWGDNGLFERKRNETAEA 1056 Query: 567 WIDGGERFAERIVAFACVEGIF 632 GER +A ++ +F Sbjct: 1057 TRSEGERLRTEQLALTSLQRLF 1078
>Q2FDK5:SRAP_STAA3 Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain USA300) Length = 2271 Score = 33.1 bits (74), Expect = 2.6 Identities = 34/120 (28%), Positives = 51/120 (42%) Frame = -2 Query: 880 SPFMPTSAQGSASQTNSLSMSTASETISKTXXXXXXXXXXXXXRQAKSQCRPSSREMSSL 701 S M TS GS S++ S S ST S++ SK+ Q+ SQ +S S+ Sbjct: 1032 SSSMSTSQSGSTSESLSDSQST-SDSDSKSLS------------QSTSQSGSTSTSTSTS 1078 Query: 700 EKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRSPPSIQRRAQSALRRTAGMVS 521 VR S A + + ++ + +T S S S + +QSA T+G VS Sbjct: 1079 ASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSAFTSTSGSVS 1138
>O43497:CAC1G_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1G - Homo| sapiens (Human) Length = 2377 Score = 33.1 bits (74), Expect = 2.6 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -2 Query: 727 PSSREMSSLEKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRS---PPSIQRRA 557 P+SR SS PG + S A+ P + + + RS++ S PS++RR+ Sbjct: 1064 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSLGRAPSLKRRS 1123 Query: 556 QSALRRT 536 S RR+ Sbjct: 1124 PSGERRS 1130
>P11156:RIR2_BPT4 Ribonucleoside-diphosphate reductase subunit beta - Bacteriophage| T4 Length = 388 Score = 32.7 bits (73), Expect = 3.5 Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 1/148 (0%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWE-FYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFI 311 EP+ S + + I+ +++E ++ ++ FW EEV+L DA ++ L +++ Sbjct: 15 EPMFFGSGLGLARYDIQRHRVFEELIERQISFFWRPEEVNLMMDAAQFN-KLPQYQQNIF 73 Query: 312 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRDD 491 ++ L + + D I ++ MS + + E IHS Y+ ++ D Sbjct: 74 TNNLKYQSLLDSIQGRAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTD- 132 Query: 492 VEKDRLFRAIDTIPAVRRKADWALRWID 575 ++F I A+ ++A+ R+ D Sbjct: 133 --PSKVFDEIVLDEAIMKRAESIGRYYD 158
>Q5HCP3:SRAP_STAAC Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain COL) Length = 2261 Score = 32.3 bits (72), Expect = 4.5 Identities = 34/120 (28%), Positives = 51/120 (42%) Frame = -2 Query: 880 SPFMPTSAQGSASQTNSLSMSTASETISKTXXXXXXXXXXXXXRQAKSQCRPSSREMSSL 701 S M TS GS S++ S S ST S++ SK+ Q+ SQ +S S+ Sbjct: 1032 SSSMSTSQSGSTSESLSDSQST-SDSDSKSLS------------QSTSQSGSTSTSTSTS 1078 Query: 700 EKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRSPPSIQRRAQSALRRTAGMVS 521 VR S A + + ++ + +T S S S + +QSA T+G VS Sbjct: 1079 ASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVS 1138
>Q2FUW1:SRAP_STAA8 Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain NCTC 8325) Length = 2271 Score = 32.3 bits (72), Expect = 4.5 Identities = 34/120 (28%), Positives = 51/120 (42%) Frame = -2 Query: 880 SPFMPTSAQGSASQTNSLSMSTASETISKTXXXXXXXXXXXXXRQAKSQCRPSSREMSSL 701 S M TS GS S++ S S ST S++ SK+ Q+ SQ +S S+ Sbjct: 1032 SSSMSTSQSGSTSESLSDSQST-SDSDSKSLS------------QSTSQSGSTSTSTSTS 1078 Query: 700 EKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRSPPSIQRRAQSALRRTAGMVS 521 VR S A + + ++ + +T S S S + +QSA T+G VS Sbjct: 1079 ASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVS 1138
>Q05865:FOLC_BACSU Folylpolyglutamate synthase - Bacillus subtilis| Length = 430 Score = 32.0 bits (71), Expect = 5.9 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 932 GLQQAVQRHQPVRLDGAHLAAGQDKLLREARRR 1030 G + VQ H PV LDGAH G +KL ++R Sbjct: 301 GRLELVQEHPPVYLDGAHNEEGVEKLAETMKQR 333
>Q68FR2:BIN2_RAT Bridging integrator 2 - Rattus norvegicus (Rat)| Length = 507 Score = 32.0 bits (71), Expect = 5.9 Identities = 25/98 (25%), Positives = 45/98 (45%) Frame = -2 Query: 1084 CWVAAPPLRLDMTDAFWYSPTRFSKKFVLPCSEMSSIQSNGLVALYSLLQPSAMSRRSAT 905 C+V ++ D F+ ++ + S++ SN + + L S+ SRRS Sbjct: 205 CYVTVFQNISNLRDVFYREMSKLNHSLYEVMSKLEKQHSNKVFVVKGL---SSSSRRSLV 261 Query: 904 NSMYWLMRSPFMPTSAQGSASQTNSLSMSTASETISKT 791 S + F P S S + N+LS+++ SE++S T Sbjct: 262 ISPPVQTCTAFSPVSPVTSPTSPNALSVTSESESVSAT 299
>P22185:AOX1_SAUGU Alternative oxidase, mitochondrial precursor - Sauromatum guttatum| (Voodoo lily) Length = 349 Score = 32.0 bits (71), Expect = 5.9 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 1135 LHIIRVTDQKSSSMLKTCWVAAPPLRLDMTDAFWYSPTRFSKKFVLPCSE 986 L +R T +SS+L C AAP R + W+SP R + P + Sbjct: 24 LPALRPTADTASSLLHGCSAAAPAQRAGLWPPSWFSPPRHASTLSAPAQD 73
>P34216:YBE7_YEAST Uncharacterized protein YBL047C - Saccharomyces cerevisiae (Baker's| yeast) Length = 1381 Score = 31.6 bits (70), Expect = 7.7 Identities = 20/72 (27%), Positives = 35/72 (48%) Frame = -2 Query: 748 QAKSQCRPSSREMSSLEKVRPGMSPRFFSQKMAQKEPEKKMPSTQAKATMRSAKRSPPSI 569 Q Q P + S L+K P + F Q + ++EPE++ ++ T + PP + Sbjct: 468 QQPQQPPPLTHSSSGLKKFTPTSN---FGQSIIKEEPEEQEQLRESSDTFSA---QPPPV 521 Query: 568 QRRAQSALRRTA 533 + A S ++RTA Sbjct: 522 PKHASSPVKRTA 533
>Q6DT37:MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma - Homo sapiens (Human)| Length = 1551 Score = 31.6 bits (70), Expect = 7.7 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 3/128 (2%) Frame = +3 Query: 135 EPLLAESSDRFSMFPIRFPQIWEFYKKA-VASFWTAEEVDLSSDARHWDTTL--SNDERH 305 E + D +F ++ WE K+A A F +V + D+R W TTL + + Sbjct: 84 EVTVVRQRDTGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSR-WVTTLHYAFQDEE 142 Query: 306 FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIR 485 ++ V+ ++A D L L SRF D E FY ++ + ++SL Y+ Sbjct: 143 YLYLVMDYYAGGD---LLTLLSRF-EDRLPPELAQFYLAEMVL-----AIHSLHQLGYVH 193 Query: 486 DDVEKDRL 509 DV+ D + Sbjct: 194 RDVKPDNV 201
>P49134:ITB1_RAT Integrin beta-1 precursor - Rattus norvegicus (Rat)| Length = 799 Score = 31.6 bits (70), Expect = 7.7 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +3 Query: 936 CNKLYNATNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGG 1070 C N T+PF + ++SL + FF + VG+ + + + + GG Sbjct: 207 CTSEQNCTSPFSYKNVLSLTDRGEFFNELVGQQRISGNLDSPEGG 251
>P09055:ITB1_MOUSE Integrin beta-1 precursor - Mus musculus (Mouse)| Length = 798 Score = 31.6 bits (70), Expect = 7.7 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +3 Query: 936 CNKLYNATNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGG 1070 C N T+PF + ++SL + FF + VG+ + + + + GG Sbjct: 207 CTSEQNCTSPFSYKNVLSLTDRGEFFNELVGQQRISGNLDSPEGG 251
>Q03288:ASIP_MOUSE Agouti-signaling protein precursor - Mus musculus (Mouse)| Length = 131 Score = 31.6 bits (70), Expect = 7.7 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = -2 Query: 664 SQKMAQKEPEKKMPSTQAKATMRSAKRSPP 575 S+K+++KE EK+ S++ KA+M+ R PP Sbjct: 59 SKKISRKEAEKRKRSSKKKASMKKVARPPP 88 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 156,214,345 Number of extensions: 3038330 Number of successful extensions: 13172 Number of sequences better than 10.0: 89 Number of HSP's gapped: 13030 Number of HSP's successfully gapped: 96 Length of query: 437 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 321 Effective length of database: 68,868,219 Effective search space: 22106698299 Effective search space used: 22106698299 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
