ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128k13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK122085:Os10g0486600 | 289 | 2e-78 | 2 | AK063786:Os10g0486600 | 289 | 2e-78 | 3 | Os07g0202300:Os07g0202300 | 152 | 3e-37 | 4 | AK067692:Os11g0297900 | 82 | 4e-16 | 5 | AK071198:Os05g0480200 | 31 | 0.78 | 6 | AK071795:Os07g0693200 | 30 | 2.3 | 7 | AK068311:Os07g0657900 | 29 | 3.9 | 8 | AJ582621:Os07g0657900 | 29 | 3.9 | 9 | AK102197:Os04g0558400 | 28 | 6.6 | 10 | AK061940:Os04g0558400 | 28 | 6.6 | 11 | AK061440:Os04g0558400 | 28 | 6.6 | 12 | AK111699:Os04g0117600 | 28 | 8.7 | 13 | AK105626:Os10g0500700 | 28 | 8.7 | 14 | AK067982:Os10g0500700 | 28 | 8.7 | 15 | AK059628:Os10g0500700 | 28 | 8.7 |
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>AK122085:Os10g0486600 | Length = 142 Score = 289 bits (739), Expect = 2e-78 Identities = 137/142 (96%), Positives = 141/142 (99%) Frame = +3 Query: 93 MSYLLPHLHSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYL 272 MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVL+ VAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL 60 Query: 273 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVETVY 452 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA+KDKQEF+DIVETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120 Query: 453 RGARKGRGLVIAPKDYSTKYRY 518 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>AK063786:Os10g0486600 | Length = 142 Score = 289 bits (739), Expect = 2e-78 Identities = 137/142 (96%), Positives = 141/142 (99%) Frame = +3 Query: 93 MSYLLPHLHSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYL 272 MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVL+ VAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL 60 Query: 273 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVETVY 452 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA+KDKQEF+DIVETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120 Query: 453 RGARKGRGLVIAPKDYSTKYRY 518 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>Os07g0202300:Os07g0202300 | Length = 299 Score = 152 bits (383), Expect = 3e-37 Identities = 72/75 (96%), Positives = 74/75 (98%) Frame = +3 Query: 93 MSYLLPHLHSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYL 272 MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVL+ VAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL 60 Query: 273 VDITEVPDFNTMYEL 317 VDITEVPDFNTMYEL Sbjct: 61 VDITEVPDFNTMYEL 75
>AK067692:Os11g0297900 | Length = 152 Score = 82.0 bits (201), Expect = 4e-16 Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 4/136 (2%) Frame = +3 Query: 96 SYLLPHLHSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYLV 275 S LLP L VD AI ++++++RFG D C+ +D++L+ + I FA + LV Sbjct: 3 SALLPTLRRKPEVDAAIRDTLDKVLVLRFGRADDAACLHLDDILAKSSWDISRFATVALV 62 Query: 276 DITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVE 443 D+ + + + +D P+T+ FFF +H+ +D GT ++ K + KQ+F+D+VE Sbjct: 63 DM-DSEEMQVYIDYFDITLVPATI-FFFNAQHMKMDSGTPDHTKWIGSFSSKQDFIDVVE 120 Query: 444 TVYRGARKGRGLVIAP 491 ++RGA KG+ +V P Sbjct: 121 AIFRGAMKGKLIVSCP 136
>AK071198:Os05g0480200 | Length = 135 Score = 31.2 bits (69), Expect = 0.78 Identities = 21/90 (23%), Positives = 40/90 (44%) Frame = +3 Query: 126 WAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYLVDITEVPDFNT 305 W +AE + V+++F W C + + ++ + V VD+ E+P+ T Sbjct: 31 WDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELSLKYPDI-VFVSVDVDEMPELVT 89 Query: 306 MYELYDPSTVMFFFRNKHIMIDLGTGNNNK 395 Y++ T +F N+ ID G N++ Sbjct: 90 QYDVRATPTFIFMKNNEE--IDKLVGGNHE 117
>AK071795:Os07g0693200 | Length = 402 Score = 29.6 bits (65), Expect = 2.3 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -3 Query: 287 LGDVDKVDHRKVLYCLSHP*QHLVHLHARLVPVVAEADHDQPL 159 L VD VD V+ L H + +V LH VP V + + D PL Sbjct: 70 LAVVDGVDEAHVVPVLDHVVRPVVDLHLDGVPAVVDEEDDAPL 112
>AK068311:Os07g0657900 | Length = 298 Score = 28.9 bits (63), Expect = 3.9 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 1/120 (0%) Frame = +3 Query: 90 EMSYLLPHL-HSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVI 266 EM + + H H G + + E RLV + + C + +LS V + Sbjct: 187 EMGFDISHTKHRGQYALRKVYHESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHF 246 Query: 267 YLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVET 446 +DI E P+ + V FF+NK ++ + +K K+E+ + +E+ Sbjct: 247 VEIDIEEDPEIAEAAGIMGTPCVQ-FFKNKEMLRTVS---------GVKMKKEYREFIES 296
>AJ582621:Os07g0657900 | Length = 488 Score = 28.9 bits (63), Expect = 3.9 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 1/120 (0%) Frame = +3 Query: 90 EMSYLLPHL-HSGWAVDQAILAEEERLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVI 266 EM + + H H G + + E RLV + + C + +LS V + Sbjct: 377 EMGFDISHTKHRGQYALRKVYHESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHF 436 Query: 267 YLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVET 446 +DI E P+ + V FF+NK ++ + +K K+E+ + +E+ Sbjct: 437 VEIDIEEDPEIAEAAGIMGTPCVQ-FFKNKEMLRTVS---------GVKMKKEYREFIES 486
>AK102197:Os04g0558400 | Length = 428 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 536 PGTDTSVTVFGGVILGSNHQTTALTSSPVDSLHDVNKLLLVF 411 PG T VFGG ++G Q A S VD L V+ L +F Sbjct: 154 PGAPTFRQVFGGQLIG---QALAAASKTVDCLKAVHSLHAIF 192
>AK061940:Os04g0558400 | Length = 370 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 536 PGTDTSVTVFGGVILGSNHQTTALTSSPVDSLHDVNKLLLVF 411 PG T VFGG ++G Q A S VD L V+ L +F Sbjct: 96 PGAPTFRQVFGGQLIG---QALAAASKTVDCLKAVHSLHAIF 134
>AK061440:Os04g0558400 | Length = 428 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 536 PGTDTSVTVFGGVILGSNHQTTALTSSPVDSLHDVNKLLLVF 411 PG T VFGG ++G Q A S VD L V+ L +F Sbjct: 154 PGAPTFRQVFGGQLIG---QALAAASKTVDCLKAVHSLHAIF 192
>AK111699:Os04g0117600 | Length = 685 Score = 27.7 bits (60), Expect = 8.7 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 524 TSVTVFGGVILGSNHQTTALTSSPVDSLHDVNKLLLVFHCPVDLVV 387 +S +FG I G+ T A T VD+ V+ + + CP+D+VV Sbjct: 384 SSEDLFGVQICGAYPDTVARTVELVDNECSVDFIDINMGCPIDIVV 429
>AK105626:Os10g0500700 | Length = 384 Score = 27.7 bits (60), Expect = 8.7 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 162 RLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMF 341 R + F W E QMDEV + +A + AV V+ E P+ + E Y + V + Sbjct: 21 RAAAVHFWAAWCEASKQMDEVFAHLAVDFSH-AVFLRVEAEEQPEIS---EAYGVTAVPY 76 Query: 342 F 344 F Sbjct: 77 F 77
>AK067982:Os10g0500700 | Length = 491 Score = 27.7 bits (60), Expect = 8.7 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 162 RLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMF 341 R + F W E QMDEV + +A + AV V+ E P+ + E Y + V + Sbjct: 21 RAAAVHFWAAWCEASKQMDEVFAHLAVDFSH-AVFLRVEAEEQPEIS---EAYGVTAVPY 76 Query: 342 F 344 F Sbjct: 77 F 77
>AK059628:Os10g0500700 | Length = 491 Score = 27.7 bits (60), Expect = 8.7 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 162 RLVMIRFGHDWDETCMQMDEVLSGVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMF 341 R + F W E QMDEV + +A + AV V+ E P+ + E Y + V + Sbjct: 21 RAAAVHFWAAWCEASKQMDEVFAHLAVDFSH-AVFLRVEAEEQPEIS---EAYGVTAVPY 76 Query: 342 F 344 F Sbjct: 77 F 77 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,780,457 Number of extensions: 437930 Number of successful extensions: 1047 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1046 Number of HSP's successfully gapped: 15 Length of query: 249 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 151 Effective length of database: 11,475,837 Effective search space: 1732851387 Effective search space used: 1732851387 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
